GCA_028325665.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaBGJPACMN_11 (original name was: gnl|Prokka|BGJPACMN_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	T3PKS	234,240	275,406

gnlProkkaBGJPACMN_16 (original name was: gnl|Prokka|BGJPACMN_16)

Region	Type	From	To	Most similar known cluster		Similarity
Region 16.1	RiPP-like	113,663	132,512

gnlProkkaBGJPACMN_18 (original name was: gnl|Prokka|BGJPACMN_18)

Region	Type	From	To	Most similar known cluster		Similarity
Region 18.1	RiPP-like	73,981	86,077	quinolidomicin A	Polyketide	3%

Region	Type	From	To	Most similar known cluster	Similarity
Region 11.1	T3PKS	234,240	275,406
Region 16.1	RiPP-like	113,663	132,512
Region 18.1	RiPP-like	73,981	86,077	quinolidomicin A	Polyketide	3%

No secondary metabolite regions were found in these records:: gnlProkkaBGJPACMN_1 (original name was: gnl|Prokka|BGJPACMN_1); gnlProkkaBGJPACMN_2 (original name was: gnl|Prokka|BGJPACMN_2); gnlProkkaBGJPACMN_3 (original name was: gnl|Prokka|BGJPACMN_3); gnlProkkaBGJPACMN_4 (original name was: gnl|Prokka|BGJPACMN_4); gnlProkkaBGJPACMN_5 (original name was: gnl|Prokka|BGJPACMN_5); gnlProkkaBGJPACMN_6 (original name was: gnl|Prokka|BGJPACMN_6); gnlProkkaBGJPACMN_7 (original name was: gnl|Prokka|BGJPACMN_7); gnlProkkaBGJPACMN_8 (original name was: gnl|Prokka|BGJPACMN_8); gnlProkkaBGJPACMN_9 (original name was: gnl|Prokka|BGJPACMN_9); gnlProkkaBGJPACMN_10 (original name was: gnl|Prokka|BGJPACMN_10); gnlProkkaBGJPACMN_12 (original name was: gnl|Prokka|BGJPACMN_12); gnlProkkaBGJPACMN_13 (original name was: gnl|Prokka|BGJPACMN_13); gnlProkkaBGJPACMN_14 (original name was: gnl|Prokka|BGJPACMN_14); gnlProkkaBGJPACMN_15 (original name was: gnl|Prokka|BGJPACMN_15); gnlProkkaBGJPACMN_17 (original name was: gnl|Prokka|BGJPACMN_17); gnlProkkaBGJPACMN_19 (original name was: gnl|Prokka|BGJPACMN_19); gnlProkkaBGJPACMN_20 (original name was: gnl|Prokka|BGJPACMN_20); gnlProkkaBGJPACMN_21 (original name was: gnl|Prokka|BGJPACMN_21); gnlProkkaBGJPACMN_22 (original name was: gnl|Prokka|BGJPACMN_22); gnlProkkaBGJPACMN_23 (original name was: gnl|Prokka|BGJPACMN_23)

Compact view

gnlProkkaBGJPACMN_11 - Region 1 - T3PKS

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Location: 234,240 - 275,406 nt. (total: 41,167 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

NRPS/PKS domains

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaBGJPACMN_16 - Region 1 - RiPP-like

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Location: 113,663 - 132,512 nt. (total: 18,850 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaBGJPACMN_18 - Region 1 - RiPP-like

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Location: 73,981 - 86,077 nt. (total: 12,097 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1