GCA_028396295.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaPCJBKAIL_3 (original name was: gnl|Prokka|PCJBKAIL_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	RRE-containing	38,438	58,704

gnlProkkaPCJBKAIL_7 (original name was: gnl|Prokka|PCJBKAIL_7)

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	phosphonate	65,432	90,458	polysaccharide B	Saccharide	10%

gnlProkkaPCJBKAIL_11 (original name was: gnl|Prokka|PCJBKAIL_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	RRE-containing	565,158	585,511

Region	Type	From	To	Most similar known cluster	Similarity
Region 3.1	RRE-containing	38,438	58,704
Region 7.1	phosphonate	65,432	90,458	polysaccharide B	Saccharide	10%
Region 11.1	RRE-containing	565,158	585,511

No secondary metabolite regions were found in these records:: gnlProkkaPCJBKAIL_1 (original name was: gnl|Prokka|PCJBKAIL_1); gnlProkkaPCJBKAIL_2 (original name was: gnl|Prokka|PCJBKAIL_2); gnlProkkaPCJBKAIL_4 (original name was: gnl|Prokka|PCJBKAIL_4); gnlProkkaPCJBKAIL_5 (original name was: gnl|Prokka|PCJBKAIL_5); gnlProkkaPCJBKAIL_6 (original name was: gnl|Prokka|PCJBKAIL_6); gnlProkkaPCJBKAIL_8 (original name was: gnl|Prokka|PCJBKAIL_8); gnlProkkaPCJBKAIL_9 (original name was: gnl|Prokka|PCJBKAIL_9); gnlProkkaPCJBKAIL_10 (original name was: gnl|Prokka|PCJBKAIL_10); gnlProkkaPCJBKAIL_12 (original name was: gnl|Prokka|PCJBKAIL_12); gnlProkkaPCJBKAIL_13 (original name was: gnl|Prokka|PCJBKAIL_13); gnlProkkaPCJBKAIL_14 (original name was: gnl|Prokka|PCJBKAIL_14); gnlProkkaPCJBKAIL_15 (original name was: gnl|Prokka|PCJBKAIL_15); gnlProkkaPCJBKAIL_16 (original name was: gnl|Prokka|PCJBKAIL_16); gnlProkkaPCJBKAIL_17 (original name was: gnl|Prokka|PCJBKAIL_17); gnlProkkaPCJBKAIL_18 (original name was: gnl|Prokka|PCJBKAIL_18); gnlProkkaPCJBKAIL_19 (original name was: gnl|Prokka|PCJBKAIL_19); gnlProkkaPCJBKAIL_20 (original name was: gnl|Prokka|PCJBKAIL_20); gnlProkkaPCJBKAIL_21 (original name was: gnl|Prokka|PCJBKAIL_21); gnlProkkaPCJBKAIL_22 (original name was: gnl|Prokka|PCJBKAIL_22); gnlProkkaPCJBKAIL_23 (original name was: gnl|Prokka|PCJBKAIL_23); gnlProkkaPCJBKAIL_24 (original name was: gnl|Prokka|PCJBKAIL_24); gnlProkkaPCJBKAIL_25 (original name was: gnl|Prokka|PCJBKAIL_25); gnlProkkaPCJBKAIL_26 (original name was: gnl|Prokka|PCJBKAIL_26); gnlProkkaPCJBKAIL_27 (original name was: gnl|Prokka|PCJBKAIL_27); gnlProkkaPCJBKAIL_28 (original name was: gnl|Prokka|PCJBKAIL_28)

Compact view

gnlProkkaPCJBKAIL_3 - Region 1 - RRE-containing

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Location: 38,438 - 58,704 nt. (total: 20,267 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPCJBKAIL_7 - Region 1 - phosphonate

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Location: 65,432 - 90,458 nt. (total: 25,027 nt) Show pHMM detection rules used

Region on contig edge.

phosphonate: (phosphonates and minimum(1, [2-Hacid_dh_C, Aldedh, Aminotran_1_2, Aminotran_5, AurF, CTP_transf_like, DUF4992, Fe-ADH, HMGL-like, Metallophos_2, NTP_transf_3, NTP_transf_5, PALP, PEP_mutase, TPP_enzyme_C, TPP_enzyme_N, phosphonates]) and not (phosphonatesHydrolase or phosphonatesMeIsocitrateLyase))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaPCJBKAIL_11 - Region 1 - RRE-containing

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Location: 565,158 - 585,511 nt. (total: 20,354 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.