GCA_028396555.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaJJNLBHDN_9 (original name was: gnl|Prokka|JJNLBHDN_9)

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	resorcinol	136	41,275

gnlProkkaJJNLBHDN_38 (original name was: gnl|Prokka|JJNLBHDN_38)

Region	Type	From	To	Most similar known cluster		Similarity
Region 38.1	RRE-containing	97,221	117,574

Region	Type	From	To	Most similar known cluster	Similarity
Region 9.1	resorcinol	136	41,275
Region 38.1	RRE-containing	97,221	117,574

No secondary metabolite regions were found in these records:: gnlProkkaJJNLBHDN_1 (original name was: gnl|Prokka|JJNLBHDN_1); gnlProkkaJJNLBHDN_2 (original name was: gnl|Prokka|JJNLBHDN_2); gnlProkkaJJNLBHDN_3 (original name was: gnl|Prokka|JJNLBHDN_3); gnlProkkaJJNLBHDN_4 (original name was: gnl|Prokka|JJNLBHDN_4); gnlProkkaJJNLBHDN_5 (original name was: gnl|Prokka|JJNLBHDN_5); gnlProkkaJJNLBHDN_6 (original name was: gnl|Prokka|JJNLBHDN_6); gnlProkkaJJNLBHDN_7 (original name was: gnl|Prokka|JJNLBHDN_7); gnlProkkaJJNLBHDN_8 (original name was: gnl|Prokka|JJNLBHDN_8); gnlProkkaJJNLBHDN_10 (original name was: gnl|Prokka|JJNLBHDN_10); gnlProkkaJJNLBHDN_11 (original name was: gnl|Prokka|JJNLBHDN_11); gnlProkkaJJNLBHDN_12 (original name was: gnl|Prokka|JJNLBHDN_12); gnlProkkaJJNLBHDN_13 (original name was: gnl|Prokka|JJNLBHDN_13); gnlProkkaJJNLBHDN_14 (original name was: gnl|Prokka|JJNLBHDN_14); gnlProkkaJJNLBHDN_15 (original name was: gnl|Prokka|JJNLBHDN_15); gnlProkkaJJNLBHDN_16 (original name was: gnl|Prokka|JJNLBHDN_16); gnlProkkaJJNLBHDN_17 (original name was: gnl|Prokka|JJNLBHDN_17); gnlProkkaJJNLBHDN_18 (original name was: gnl|Prokka|JJNLBHDN_18); gnlProkkaJJNLBHDN_19 (original name was: gnl|Prokka|JJNLBHDN_19); gnlProkkaJJNLBHDN_20 (original name was: gnl|Prokka|JJNLBHDN_20); gnlProkkaJJNLBHDN_21 (original name was: gnl|Prokka|JJNLBHDN_21); gnlProkkaJJNLBHDN_22 (original name was: gnl|Prokka|JJNLBHDN_22); gnlProkkaJJNLBHDN_23 (original name was: gnl|Prokka|JJNLBHDN_23); gnlProkkaJJNLBHDN_24 (original name was: gnl|Prokka|JJNLBHDN_24); gnlProkkaJJNLBHDN_25 (original name was: gnl|Prokka|JJNLBHDN_25); gnlProkkaJJNLBHDN_26 (original name was: gnl|Prokka|JJNLBHDN_26); gnlProkkaJJNLBHDN_27 (original name was: gnl|Prokka|JJNLBHDN_27); gnlProkkaJJNLBHDN_28 (original name was: gnl|Prokka|JJNLBHDN_28); gnlProkkaJJNLBHDN_29 (original name was: gnl|Prokka|JJNLBHDN_29); gnlProkkaJJNLBHDN_30 (original name was: gnl|Prokka|JJNLBHDN_30); gnlProkkaJJNLBHDN_31 (original name was: gnl|Prokka|JJNLBHDN_31); gnlProkkaJJNLBHDN_32 (original name was: gnl|Prokka|JJNLBHDN_32); gnlProkkaJJNLBHDN_33 (original name was: gnl|Prokka|JJNLBHDN_33); gnlProkkaJJNLBHDN_34 (original name was: gnl|Prokka|JJNLBHDN_34); gnlProkkaJJNLBHDN_35 (original name was: gnl|Prokka|JJNLBHDN_35); gnlProkkaJJNLBHDN_36 (original name was: gnl|Prokka|JJNLBHDN_36); gnlProkkaJJNLBHDN_37 (original name was: gnl|Prokka|JJNLBHDN_37); gnlProkkaJJNLBHDN_39 (original name was: gnl|Prokka|JJNLBHDN_39)

Compact view

gnlProkkaJJNLBHDN_9 - Region 1 - resorcinol

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Location: 136 - 41,275 nt. (total: 41,140 nt) Show pHMM detection rules used

resorcinol: DarB

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core biosynthetic genes

additional biosynthetic genes

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJJNLBHDN_38 - Region 1 - RRE-containing

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Location: 97,221 - 117,574 nt. (total: 20,354 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.