GCA_028398025.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaMIBPKNPP_3 (original name was: gnl|Prokka|MIBPKNPP_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	RRE-containing	107,952	128,218

gnlProkkaMIBPKNPP_11 (original name was: gnl|Prokka|MIBPKNPP_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	RRE-containing	39,306	59,659

gnlProkkaMIBPKNPP_31 (original name was: gnl|Prokka|MIBPKNPP_31)

Region	Type	From	To	Most similar known cluster		Similarity
Region 31.1	phosphonate	301,984	327,010	polysaccharide B	Saccharide	10%

Region	Type	From	To	Most similar known cluster	Similarity
Region 3.1	RRE-containing	107,952	128,218
Region 11.1	RRE-containing	39,306	59,659
Region 31.1	phosphonate	301,984	327,010	polysaccharide B	Saccharide	10%

No secondary metabolite regions were found in these records:: gnlProkkaMIBPKNPP_1 (original name was: gnl|Prokka|MIBPKNPP_1); gnlProkkaMIBPKNPP_2 (original name was: gnl|Prokka|MIBPKNPP_2); gnlProkkaMIBPKNPP_4 (original name was: gnl|Prokka|MIBPKNPP_4); gnlProkkaMIBPKNPP_5 (original name was: gnl|Prokka|MIBPKNPP_5); gnlProkkaMIBPKNPP_6 (original name was: gnl|Prokka|MIBPKNPP_6); gnlProkkaMIBPKNPP_7 (original name was: gnl|Prokka|MIBPKNPP_7); gnlProkkaMIBPKNPP_8 (original name was: gnl|Prokka|MIBPKNPP_8); gnlProkkaMIBPKNPP_9 (original name was: gnl|Prokka|MIBPKNPP_9); gnlProkkaMIBPKNPP_10 (original name was: gnl|Prokka|MIBPKNPP_10); gnlProkkaMIBPKNPP_12 (original name was: gnl|Prokka|MIBPKNPP_12); gnlProkkaMIBPKNPP_13 (original name was: gnl|Prokka|MIBPKNPP_13); gnlProkkaMIBPKNPP_14 (original name was: gnl|Prokka|MIBPKNPP_14); gnlProkkaMIBPKNPP_15 (original name was: gnl|Prokka|MIBPKNPP_15); gnlProkkaMIBPKNPP_16 (original name was: gnl|Prokka|MIBPKNPP_16); gnlProkkaMIBPKNPP_17 (original name was: gnl|Prokka|MIBPKNPP_17); gnlProkkaMIBPKNPP_18 (original name was: gnl|Prokka|MIBPKNPP_18); gnlProkkaMIBPKNPP_19 (original name was: gnl|Prokka|MIBPKNPP_19); gnlProkkaMIBPKNPP_20 (original name was: gnl|Prokka|MIBPKNPP_20); gnlProkkaMIBPKNPP_21 (original name was: gnl|Prokka|MIBPKNPP_21); gnlProkkaMIBPKNPP_22 (original name was: gnl|Prokka|MIBPKNPP_22); gnlProkkaMIBPKNPP_23 (original name was: gnl|Prokka|MIBPKNPP_23); gnlProkkaMIBPKNPP_24 (original name was: gnl|Prokka|MIBPKNPP_24); gnlProkkaMIBPKNPP_25 (original name was: gnl|Prokka|MIBPKNPP_25); gnlProkkaMIBPKNPP_26 (original name was: gnl|Prokka|MIBPKNPP_26); gnlProkkaMIBPKNPP_27 (original name was: gnl|Prokka|MIBPKNPP_27); gnlProkkaMIBPKNPP_28 (original name was: gnl|Prokka|MIBPKNPP_28); gnlProkkaMIBPKNPP_29 (original name was: gnl|Prokka|MIBPKNPP_29); gnlProkkaMIBPKNPP_30 (original name was: gnl|Prokka|MIBPKNPP_30); gnlProkkaMIBPKNPP_32 (original name was: gnl|Prokka|MIBPKNPP_32); gnlProkkaMIBPKNPP_33 (original name was: gnl|Prokka|MIBPKNPP_33); gnlProkkaMIBPKNPP_34 (original name was: gnl|Prokka|MIBPKNPP_34); gnlProkkaMIBPKNPP_35 (original name was: gnl|Prokka|MIBPKNPP_35); gnlProkkaMIBPKNPP_36 (original name was: gnl|Prokka|MIBPKNPP_36)

Compact view

gnlProkkaMIBPKNPP_3 - Region 1 - RRE-containing

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Location: 107,952 - 128,218 nt. (total: 20,267 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMIBPKNPP_11 - Region 1 - RRE-containing

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Location: 39,306 - 59,659 nt. (total: 20,354 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMIBPKNPP_31 - Region 1 - phosphonate

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Location: 301,984 - 327,010 nt. (total: 25,027 nt) Show pHMM detection rules used

Region on contig edge.

phosphonate: (phosphonates and minimum(1, [2-Hacid_dh_C, Aldedh, Aminotran_1_2, Aminotran_5, AurF, CTP_transf_like, DUF4992, Fe-ADH, HMGL-like, Metallophos_2, NTP_transf_3, NTP_transf_5, PALP, PEP_mutase, TPP_enzyme_C, TPP_enzyme_N, phosphonates]) and not (phosphonatesHydrolase or phosphonatesMeIsocitrateLyase))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1