GCA_028398085.1 - 5 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaNIHJBLIN_10 (original name was: gnl|Prokka|NIHJBLIN_10)

Region	Type	From	To	Most similar known cluster		Similarity
Region 10.1	resorcinol	1	27,464

gnlProkkaNIHJBLIN_22 (original name was: gnl|Prokka|NIHJBLIN_22)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	RRE-containing	26,333	46,599

gnlProkkaNIHJBLIN_40 (original name was: gnl|Prokka|NIHJBLIN_40)

Region	Type	From	To	Most similar known cluster		Similarity
Region 40.1	RRE-containing	276,667	297,020

gnlProkkaNIHJBLIN_45 (original name was: gnl|Prokka|NIHJBLIN_45)

Region	Type	From	To	Most similar known cluster		Similarity
Region 45.1	RRE-containing	137,457	159,091
Region 45.2	resorcinol	177,297	203,741

Region	Type	From	To	Similarity
Region 10.1	resorcinol	1	27,464
Region 22.1	RRE-containing	26,333	46,599
Region 40.1	RRE-containing	276,667	297,020
Region 45.1	RRE-containing	137,457	159,091
Region 45.2	resorcinol	177,297	203,741

No secondary metabolite regions were found in these records:: gnlProkkaNIHJBLIN_1 (original name was: gnl|Prokka|NIHJBLIN_1); gnlProkkaNIHJBLIN_2 (original name was: gnl|Prokka|NIHJBLIN_2); gnlProkkaNIHJBLIN_3 (original name was: gnl|Prokka|NIHJBLIN_3); gnlProkkaNIHJBLIN_4 (original name was: gnl|Prokka|NIHJBLIN_4); gnlProkkaNIHJBLIN_5 (original name was: gnl|Prokka|NIHJBLIN_5); gnlProkkaNIHJBLIN_6 (original name was: gnl|Prokka|NIHJBLIN_6); gnlProkkaNIHJBLIN_7 (original name was: gnl|Prokka|NIHJBLIN_7); gnlProkkaNIHJBLIN_8 (original name was: gnl|Prokka|NIHJBLIN_8); gnlProkkaNIHJBLIN_9 (original name was: gnl|Prokka|NIHJBLIN_9); gnlProkkaNIHJBLIN_11 (original name was: gnl|Prokka|NIHJBLIN_11); gnlProkkaNIHJBLIN_12 (original name was: gnl|Prokka|NIHJBLIN_12); gnlProkkaNIHJBLIN_13 (original name was: gnl|Prokka|NIHJBLIN_13); gnlProkkaNIHJBLIN_14 (original name was: gnl|Prokka|NIHJBLIN_14); gnlProkkaNIHJBLIN_15 (original name was: gnl|Prokka|NIHJBLIN_15); gnlProkkaNIHJBLIN_16 (original name was: gnl|Prokka|NIHJBLIN_16); gnlProkkaNIHJBLIN_17 (original name was: gnl|Prokka|NIHJBLIN_17); gnlProkkaNIHJBLIN_18 (original name was: gnl|Prokka|NIHJBLIN_18); gnlProkkaNIHJBLIN_19 (original name was: gnl|Prokka|NIHJBLIN_19); gnlProkkaNIHJBLIN_20 (original name was: gnl|Prokka|NIHJBLIN_20); gnlProkkaNIHJBLIN_21 (original name was: gnl|Prokka|NIHJBLIN_21); gnlProkkaNIHJBLIN_23 (original name was: gnl|Prokka|NIHJBLIN_23); gnlProkkaNIHJBLIN_24 (original name was: gnl|Prokka|NIHJBLIN_24); gnlProkkaNIHJBLIN_25 (original name was: gnl|Prokka|NIHJBLIN_25); gnlProkkaNIHJBLIN_26 (original name was: gnl|Prokka|NIHJBLIN_26); gnlProkkaNIHJBLIN_27 (original name was: gnl|Prokka|NIHJBLIN_27); gnlProkkaNIHJBLIN_28 (original name was: gnl|Prokka|NIHJBLIN_28); gnlProkkaNIHJBLIN_29 (original name was: gnl|Prokka|NIHJBLIN_29); gnlProkkaNIHJBLIN_30 (original name was: gnl|Prokka|NIHJBLIN_30); gnlProkkaNIHJBLIN_31 (original name was: gnl|Prokka|NIHJBLIN_31); gnlProkkaNIHJBLIN_32 (original name was: gnl|Prokka|NIHJBLIN_32); gnlProkkaNIHJBLIN_33 (original name was: gnl|Prokka|NIHJBLIN_33); gnlProkkaNIHJBLIN_34 (original name was: gnl|Prokka|NIHJBLIN_34); gnlProkkaNIHJBLIN_35 (original name was: gnl|Prokka|NIHJBLIN_35); gnlProkkaNIHJBLIN_36 (original name was: gnl|Prokka|NIHJBLIN_36); gnlProkkaNIHJBLIN_37 (original name was: gnl|Prokka|NIHJBLIN_37); gnlProkkaNIHJBLIN_38 (original name was: gnl|Prokka|NIHJBLIN_38); gnlProkkaNIHJBLIN_39 (original name was: gnl|Prokka|NIHJBLIN_39); gnlProkkaNIHJBLIN_41 (original name was: gnl|Prokka|NIHJBLIN_41); gnlProkkaNIHJBLIN_42 (original name was: gnl|Prokka|NIHJBLIN_42); gnlProkkaNIHJBLIN_43 (original name was: gnl|Prokka|NIHJBLIN_43); gnlProkkaNIHJBLIN_44 (original name was: gnl|Prokka|NIHJBLIN_44)

Compact view

gnlProkkaNIHJBLIN_10 - Region 1 - resorcinol

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Location: 1 - 27,464 nt. (total: 27,464 nt) Show pHMM detection rules used

Region on contig edge.

resorcinol: DarB

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNIHJBLIN_22 - Region 1 - RRE-containing

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Location: 26,333 - 46,599 nt. (total: 20,267 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNIHJBLIN_40 - Region 1 - RRE-containing

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Location: 276,667 - 297,020 nt. (total: 20,354 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNIHJBLIN_45 - Region 1 - RRE-containing

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Location: 137,457 - 159,091 nt. (total: 21,635 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNIHJBLIN_45 - Region 2 - resorcinol

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Location: 177,297 - 203,741 nt. (total: 26,445 nt) Show pHMM detection rules used

Region on contig edge.

resorcinol: DarB

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.