GCA_028400595.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaIHMLAHMF_6 (original name was: gnl|Prokka|IHMLAHMF_6)

Region	Type	From	To	Most similar known cluster		Similarity
Region 6.1	RRE-containing	89,391	109,741

gnlProkkaIHMLAHMF_14 (original name was: gnl|Prokka|IHMLAHMF_14)

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	arylpolyene	65,934	111,811	flexirubin	Other	48%

Region	Type	From	To	Most similar known cluster	Similarity
Region 6.1	RRE-containing	89,391	109,741
Region 14.1	arylpolyene	65,934	111,811	flexirubin	Other	48%

No secondary metabolite regions were found in these records:: gnlProkkaIHMLAHMF_1 (original name was: gnl|Prokka|IHMLAHMF_1); gnlProkkaIHMLAHMF_2 (original name was: gnl|Prokka|IHMLAHMF_2); gnlProkkaIHMLAHMF_3 (original name was: gnl|Prokka|IHMLAHMF_3); gnlProkkaIHMLAHMF_4 (original name was: gnl|Prokka|IHMLAHMF_4); gnlProkkaIHMLAHMF_5 (original name was: gnl|Prokka|IHMLAHMF_5); gnlProkkaIHMLAHMF_7 (original name was: gnl|Prokka|IHMLAHMF_7); gnlProkkaIHMLAHMF_8 (original name was: gnl|Prokka|IHMLAHMF_8); gnlProkkaIHMLAHMF_9 (original name was: gnl|Prokka|IHMLAHMF_9); gnlProkkaIHMLAHMF_10 (original name was: gnl|Prokka|IHMLAHMF_10); gnlProkkaIHMLAHMF_11 (original name was: gnl|Prokka|IHMLAHMF_11); gnlProkkaIHMLAHMF_12 (original name was: gnl|Prokka|IHMLAHMF_12); gnlProkkaIHMLAHMF_13 (original name was: gnl|Prokka|IHMLAHMF_13); gnlProkkaIHMLAHMF_15 (original name was: gnl|Prokka|IHMLAHMF_15); gnlProkkaIHMLAHMF_16 (original name was: gnl|Prokka|IHMLAHMF_16); gnlProkkaIHMLAHMF_17 (original name was: gnl|Prokka|IHMLAHMF_17); gnlProkkaIHMLAHMF_18 (original name was: gnl|Prokka|IHMLAHMF_18); gnlProkkaIHMLAHMF_19 (original name was: gnl|Prokka|IHMLAHMF_19); gnlProkkaIHMLAHMF_20 (original name was: gnl|Prokka|IHMLAHMF_20); gnlProkkaIHMLAHMF_21 (original name was: gnl|Prokka|IHMLAHMF_21); gnlProkkaIHMLAHMF_22 (original name was: gnl|Prokka|IHMLAHMF_22); gnlProkkaIHMLAHMF_23 (original name was: gnl|Prokka|IHMLAHMF_23); gnlProkkaIHMLAHMF_24 (original name was: gnl|Prokka|IHMLAHMF_24); gnlProkkaIHMLAHMF_25 (original name was: gnl|Prokka|IHMLAHMF_25); gnlProkkaIHMLAHMF_26 (original name was: gnl|Prokka|IHMLAHMF_26); gnlProkkaIHMLAHMF_27 (original name was: gnl|Prokka|IHMLAHMF_27); gnlProkkaIHMLAHMF_28 (original name was: gnl|Prokka|IHMLAHMF_28); gnlProkkaIHMLAHMF_29 (original name was: gnl|Prokka|IHMLAHMF_29); gnlProkkaIHMLAHMF_30 (original name was: gnl|Prokka|IHMLAHMF_30); gnlProkkaIHMLAHMF_31 (original name was: gnl|Prokka|IHMLAHMF_31); gnlProkkaIHMLAHMF_32 (original name was: gnl|Prokka|IHMLAHMF_32); gnlProkkaIHMLAHMF_33 (original name was: gnl|Prokka|IHMLAHMF_33); gnlProkkaIHMLAHMF_34 (original name was: gnl|Prokka|IHMLAHMF_34); gnlProkkaIHMLAHMF_35 (original name was: gnl|Prokka|IHMLAHMF_35); gnlProkkaIHMLAHMF_36 (original name was: gnl|Prokka|IHMLAHMF_36); gnlProkkaIHMLAHMF_37 (original name was: gnl|Prokka|IHMLAHMF_37); gnlProkkaIHMLAHMF_38 (original name was: gnl|Prokka|IHMLAHMF_38); gnlProkkaIHMLAHMF_39 (original name was: gnl|Prokka|IHMLAHMF_39); gnlProkkaIHMLAHMF_40 (original name was: gnl|Prokka|IHMLAHMF_40); gnlProkkaIHMLAHMF_41 (original name was: gnl|Prokka|IHMLAHMF_41); gnlProkkaIHMLAHMF_42 (original name was: gnl|Prokka|IHMLAHMF_42); gnlProkkaIHMLAHMF_43 (original name was: gnl|Prokka|IHMLAHMF_43); gnlProkkaIHMLAHMF_44 (original name was: gnl|Prokka|IHMLAHMF_44); gnlProkkaIHMLAHMF_45 (original name was: gnl|Prokka|IHMLAHMF_45); gnlProkkaIHMLAHMF_46 (original name was: gnl|Prokka|IHMLAHMF_46); gnlProkkaIHMLAHMF_47 (original name was: gnl|Prokka|IHMLAHMF_47); gnlProkkaIHMLAHMF_48 (original name was: gnl|Prokka|IHMLAHMF_48); gnlProkkaIHMLAHMF_49 (original name was: gnl|Prokka|IHMLAHMF_49); gnlProkkaIHMLAHMF_50 (original name was: gnl|Prokka|IHMLAHMF_50); gnlProkkaIHMLAHMF_51 (original name was: gnl|Prokka|IHMLAHMF_51); gnlProkkaIHMLAHMF_52 (original name was: gnl|Prokka|IHMLAHMF_52); gnlProkkaIHMLAHMF_53 (original name was: gnl|Prokka|IHMLAHMF_53); gnlProkkaIHMLAHMF_54 (original name was: gnl|Prokka|IHMLAHMF_54); gnlProkkaIHMLAHMF_55 (original name was: gnl|Prokka|IHMLAHMF_55); gnlProkkaIHMLAHMF_56 (original name was: gnl|Prokka|IHMLAHMF_56); gnlProkkaIHMLAHMF_57 (original name was: gnl|Prokka|IHMLAHMF_57); gnlProkkaIHMLAHMF_58 (original name was: gnl|Prokka|IHMLAHMF_58); gnlProkkaIHMLAHMF_59 (original name was: gnl|Prokka|IHMLAHMF_59); gnlProkkaIHMLAHMF_60 (original name was: gnl|Prokka|IHMLAHMF_60); gnlProkkaIHMLAHMF_61 (original name was: gnl|Prokka|IHMLAHMF_61); gnlProkkaIHMLAHMF_62 (original name was: gnl|Prokka|IHMLAHMF_62); gnlProkkaIHMLAHMF_63 (original name was: gnl|Prokka|IHMLAHMF_63); gnlProkkaIHMLAHMF_64 (original name was: gnl|Prokka|IHMLAHMF_64); gnlProkkaIHMLAHMF_65 (original name was: gnl|Prokka|IHMLAHMF_65); gnlProkkaIHMLAHMF_66 (original name was: gnl|Prokka|IHMLAHMF_66); gnlProkkaIHMLAHMF_67 (original name was: gnl|Prokka|IHMLAHMF_67); gnlProkkaIHMLAHMF_68 (original name was: gnl|Prokka|IHMLAHMF_68); gnlProkkaIHMLAHMF_69 (original name was: gnl|Prokka|IHMLAHMF_69); gnlProkkaIHMLAHMF_70 (original name was: gnl|Prokka|IHMLAHMF_70); gnlProkkaIHMLAHMF_71 (original name was: gnl|Prokka|IHMLAHMF_71); gnlProkkaIHMLAHMF_72 (original name was: gnl|Prokka|IHMLAHMF_72); gnlProkkaIHMLAHMF_73 (original name was: gnl|Prokka|IHMLAHMF_73); gnlProkkaIHMLAHMF_74 (original name was: gnl|Prokka|IHMLAHMF_74); gnlProkkaIHMLAHMF_75 (original name was: gnl|Prokka|IHMLAHMF_75)

Compact view

gnlProkkaIHMLAHMF_6 - Region 1 - RRE-containing

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Location: 89,391 - 109,741 nt. (total: 20,351 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaIHMLAHMF_14 - Region 1 - arylpolyene

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Location: 65,934 - 111,811 nt. (total: 45,878 nt) Show pHMM detection rules used

Region on contig edge.

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

NRPS/PKS substrates

NRPS/PKS substrate predictions

ctg14_69

AMP-binding (46..335): X

nrpys: Asp, Asn, Glu, Gln, Aad

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: YMRMIITSSK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)