GCA_028401255.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaMFDPGOOF_2 (original name was: gnl|Prokka|MFDPGOOF_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	RRE-containing	67,034	87,384

gnlProkkaMFDPGOOF_10 (original name was: gnl|Prokka|MFDPGOOF_10)

Region	Type	From	To	Most similar known cluster		Similarity
Region 10.1	arylpolyene	66,479	112,356	flexirubin	Other	48%

Region	Type	From	To	Most similar known cluster	Similarity
Region 2.1	RRE-containing	67,034	87,384
Region 10.1	arylpolyene	66,479	112,356	flexirubin	Other	48%

No secondary metabolite regions were found in these records:: gnlProkkaMFDPGOOF_1 (original name was: gnl|Prokka|MFDPGOOF_1); gnlProkkaMFDPGOOF_3 (original name was: gnl|Prokka|MFDPGOOF_3); gnlProkkaMFDPGOOF_4 (original name was: gnl|Prokka|MFDPGOOF_4); gnlProkkaMFDPGOOF_5 (original name was: gnl|Prokka|MFDPGOOF_5); gnlProkkaMFDPGOOF_6 (original name was: gnl|Prokka|MFDPGOOF_6); gnlProkkaMFDPGOOF_7 (original name was: gnl|Prokka|MFDPGOOF_7); gnlProkkaMFDPGOOF_8 (original name was: gnl|Prokka|MFDPGOOF_8); gnlProkkaMFDPGOOF_9 (original name was: gnl|Prokka|MFDPGOOF_9); gnlProkkaMFDPGOOF_11 (original name was: gnl|Prokka|MFDPGOOF_11); gnlProkkaMFDPGOOF_12 (original name was: gnl|Prokka|MFDPGOOF_12); gnlProkkaMFDPGOOF_13 (original name was: gnl|Prokka|MFDPGOOF_13); gnlProkkaMFDPGOOF_14 (original name was: gnl|Prokka|MFDPGOOF_14); gnlProkkaMFDPGOOF_15 (original name was: gnl|Prokka|MFDPGOOF_15); gnlProkkaMFDPGOOF_16 (original name was: gnl|Prokka|MFDPGOOF_16); gnlProkkaMFDPGOOF_17 (original name was: gnl|Prokka|MFDPGOOF_17); gnlProkkaMFDPGOOF_18 (original name was: gnl|Prokka|MFDPGOOF_18); gnlProkkaMFDPGOOF_19 (original name was: gnl|Prokka|MFDPGOOF_19); gnlProkkaMFDPGOOF_20 (original name was: gnl|Prokka|MFDPGOOF_20); gnlProkkaMFDPGOOF_21 (original name was: gnl|Prokka|MFDPGOOF_21); gnlProkkaMFDPGOOF_22 (original name was: gnl|Prokka|MFDPGOOF_22); gnlProkkaMFDPGOOF_23 (original name was: gnl|Prokka|MFDPGOOF_23); gnlProkkaMFDPGOOF_24 (original name was: gnl|Prokka|MFDPGOOF_24); gnlProkkaMFDPGOOF_25 (original name was: gnl|Prokka|MFDPGOOF_25); gnlProkkaMFDPGOOF_26 (original name was: gnl|Prokka|MFDPGOOF_26); gnlProkkaMFDPGOOF_27 (original name was: gnl|Prokka|MFDPGOOF_27); gnlProkkaMFDPGOOF_28 (original name was: gnl|Prokka|MFDPGOOF_28); gnlProkkaMFDPGOOF_29 (original name was: gnl|Prokka|MFDPGOOF_29); gnlProkkaMFDPGOOF_30 (original name was: gnl|Prokka|MFDPGOOF_30); gnlProkkaMFDPGOOF_31 (original name was: gnl|Prokka|MFDPGOOF_31); gnlProkkaMFDPGOOF_32 (original name was: gnl|Prokka|MFDPGOOF_32); gnlProkkaMFDPGOOF_33 (original name was: gnl|Prokka|MFDPGOOF_33); gnlProkkaMFDPGOOF_34 (original name was: gnl|Prokka|MFDPGOOF_34); gnlProkkaMFDPGOOF_35 (original name was: gnl|Prokka|MFDPGOOF_35); gnlProkkaMFDPGOOF_36 (original name was: gnl|Prokka|MFDPGOOF_36); gnlProkkaMFDPGOOF_37 (original name was: gnl|Prokka|MFDPGOOF_37); gnlProkkaMFDPGOOF_38 (original name was: gnl|Prokka|MFDPGOOF_38); gnlProkkaMFDPGOOF_39 (original name was: gnl|Prokka|MFDPGOOF_39); gnlProkkaMFDPGOOF_40 (original name was: gnl|Prokka|MFDPGOOF_40); gnlProkkaMFDPGOOF_41 (original name was: gnl|Prokka|MFDPGOOF_41); gnlProkkaMFDPGOOF_42 (original name was: gnl|Prokka|MFDPGOOF_42); gnlProkkaMFDPGOOF_43 (original name was: gnl|Prokka|MFDPGOOF_43); gnlProkkaMFDPGOOF_44 (original name was: gnl|Prokka|MFDPGOOF_44); gnlProkkaMFDPGOOF_45 (original name was: gnl|Prokka|MFDPGOOF_45); gnlProkkaMFDPGOOF_46 (original name was: gnl|Prokka|MFDPGOOF_46); gnlProkkaMFDPGOOF_47 (original name was: gnl|Prokka|MFDPGOOF_47); gnlProkkaMFDPGOOF_48 (original name was: gnl|Prokka|MFDPGOOF_48); gnlProkkaMFDPGOOF_49 (original name was: gnl|Prokka|MFDPGOOF_49); gnlProkkaMFDPGOOF_50 (original name was: gnl|Prokka|MFDPGOOF_50); gnlProkkaMFDPGOOF_51 (original name was: gnl|Prokka|MFDPGOOF_51); gnlProkkaMFDPGOOF_52 (original name was: gnl|Prokka|MFDPGOOF_52); gnlProkkaMFDPGOOF_53 (original name was: gnl|Prokka|MFDPGOOF_53); gnlProkkaMFDPGOOF_54 (original name was: gnl|Prokka|MFDPGOOF_54); gnlProkkaMFDPGOOF_55 (original name was: gnl|Prokka|MFDPGOOF_55); gnlProkkaMFDPGOOF_56 (original name was: gnl|Prokka|MFDPGOOF_56); gnlProkkaMFDPGOOF_57 (original name was: gnl|Prokka|MFDPGOOF_57); gnlProkkaMFDPGOOF_58 (original name was: gnl|Prokka|MFDPGOOF_58); gnlProkkaMFDPGOOF_59 (original name was: gnl|Prokka|MFDPGOOF_59); gnlProkkaMFDPGOOF_60 (original name was: gnl|Prokka|MFDPGOOF_60); gnlProkkaMFDPGOOF_61 (original name was: gnl|Prokka|MFDPGOOF_61); gnlProkkaMFDPGOOF_62 (original name was: gnl|Prokka|MFDPGOOF_62); gnlProkkaMFDPGOOF_63 (original name was: gnl|Prokka|MFDPGOOF_63); gnlProkkaMFDPGOOF_64 (original name was: gnl|Prokka|MFDPGOOF_64); gnlProkkaMFDPGOOF_65 (original name was: gnl|Prokka|MFDPGOOF_65); gnlProkkaMFDPGOOF_66 (original name was: gnl|Prokka|MFDPGOOF_66); gnlProkkaMFDPGOOF_67 (original name was: gnl|Prokka|MFDPGOOF_67); gnlProkkaMFDPGOOF_68 (original name was: gnl|Prokka|MFDPGOOF_68); gnlProkkaMFDPGOOF_69 (original name was: gnl|Prokka|MFDPGOOF_69); gnlProkkaMFDPGOOF_70 (original name was: gnl|Prokka|MFDPGOOF_70); gnlProkkaMFDPGOOF_71 (original name was: gnl|Prokka|MFDPGOOF_71)

Compact view

gnlProkkaMFDPGOOF_2 - Region 1 - RRE-containing

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Location: 67,034 - 87,384 nt. (total: 20,351 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMFDPGOOF_10 - Region 1 - arylpolyene

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Location: 66,479 - 112,356 nt. (total: 45,878 nt) Show pHMM detection rules used

Region on contig edge.

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

NRPS/PKS substrates

NRPS/PKS substrate predictions

ctg10_69

AMP-binding (46..335): X

nrpys: Asp, Asn, Glu, Gln, Aad

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: YMRMIITSSK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)