GCA_028462625.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaBADCKHFG_2 (original name was: gnl|Prokka|BADCKHFG_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	T3PKS	78,350	107,994

gnlProkkaBADCKHFG_5 (original name was: gnl|Prokka|BADCKHFG_5)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	terpene	77,136	92,746

gnlProkkaBADCKHFG_11 (original name was: gnl|Prokka|BADCKHFG_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	RiPP-like	352,257	364,407

gnlProkkaBADCKHFG_30 (original name was: gnl|Prokka|BADCKHFG_30)

Region	Type	From	To	Most similar known cluster		Similarity
Region 28.1	cyclic-lactone-autoinducer	227,750	248,455

Region	Type	From	To	Similarity
Region 2.1	T3PKS	78,350	107,994
Region 5.1	terpene	77,136	92,746
Region 11.1	RiPP-like	352,257	364,407
Region 28.1	cyclic-lactone-autoinducer	227,750	248,455

No secondary metabolite regions were found in these records:: gnlProkkaBADCKHFG_1 (original name was: gnl|Prokka|BADCKHFG_1); gnlProkkaBADCKHFG_3 (original name was: gnl|Prokka|BADCKHFG_3); gnlProkkaBADCKHFG_4 (original name was: gnl|Prokka|BADCKHFG_4); gnlProkkaBADCKHFG_6 (original name was: gnl|Prokka|BADCKHFG_6); gnlProkkaBADCKHFG_7 (original name was: gnl|Prokka|BADCKHFG_7); gnlProkkaBADCKHFG_8 (original name was: gnl|Prokka|BADCKHFG_8); gnlProkkaBADCKHFG_9 (original name was: gnl|Prokka|BADCKHFG_9); gnlProkkaBADCKHFG_10 (original name was: gnl|Prokka|BADCKHFG_10); gnlProkkaBADCKHFG_12 (original name was: gnl|Prokka|BADCKHFG_12); gnlProkkaBADCKHFG_13 (original name was: gnl|Prokka|BADCKHFG_13); gnlProkkaBADCKHFG_14 (original name was: gnl|Prokka|BADCKHFG_14); gnlProkkaBADCKHFG_15 (original name was: gnl|Prokka|BADCKHFG_15); gnlProkkaBADCKHFG_16 (original name was: gnl|Prokka|BADCKHFG_16); gnlProkkaBADCKHFG_17 (original name was: gnl|Prokka|BADCKHFG_17); gnlProkkaBADCKHFG_18 (original name was: gnl|Prokka|BADCKHFG_18); gnlProkkaBADCKHFG_19 (original name was: gnl|Prokka|BADCKHFG_19); gnlProkkaBADCKHFG_20 (original name was: gnl|Prokka|BADCKHFG_20); gnlProkkaBADCKHFG_21 (original name was: gnl|Prokka|BADCKHFG_21); gnlProkkaBADCKHFG_22 (original name was: gnl|Prokka|BADCKHFG_22); gnlProkkaBADCKHFG_23 (original name was: gnl|Prokka|BADCKHFG_23); gnlProkkaBADCKHFG_24 (original name was: gnl|Prokka|BADCKHFG_24); gnlProkkaBADCKHFG_25 (original name was: gnl|Prokka|BADCKHFG_25); gnlProkkaBADCKHFG_28 (original name was: gnl|Prokka|BADCKHFG_28); gnlProkkaBADCKHFG_29 (original name was: gnl|Prokka|BADCKHFG_29); gnlProkkaBADCKHFG_31 (original name was: gnl|Prokka|BADCKHFG_31); gnlProkkaBADCKHFG_32 (original name was: gnl|Prokka|BADCKHFG_32); gnlProkkaBADCKHFG_33 (original name was: gnl|Prokka|BADCKHFG_33); gnlProkkaBADCKHFG_34 (original name was: gnl|Prokka|BADCKHFG_34)

Compact view

gnlProkkaBADCKHFG_2 - Region 1 - T3PKS

Download region GenBank file

Download region SVG

Location: 78,350 - 107,994 nt. (total: 29,645 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaBADCKHFG_5 - Region 1 - terpene

Download region GenBank file

Download region SVG

Location: 77,136 - 92,746 nt. (total: 15,611 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaBADCKHFG_11 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 352,257 - 364,407 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaBADCKHFG_30 - Region 1 - cyclic-lactone-autoinducer

Download region GenBank file

Download region SVG

Location: 227,750 - 248,455 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.