Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_028609745.1	Lacticaseibacillus paracasei	CLP-Y5	SAMN14686377	2018-12	China	-	0	0	0	1	1.00
2	GCA_003712825.1	Lacticaseibacillus paracasei	FAM8374	SAMN04088896	-	Switzerland	-	522	0	0	2	2.00
3	GCA_025190485.1	Lacticaseibacillus paracasei	CIRM-BIA 1869	SAMN10365453	2015	France	-	522	0	0	2	2.00
4	GCA_000409995.1	Lacticaseibacillus paracasei subsp. paracasei Lpp228	Lpp228	SAMN02469720	2008	-	Homo sapiens	539	0	0	2	2.00
5	GCA_000410475.1	Lacticaseibacillus paracasei subsp. paracasei Lpp125	Lpp125	SAMN02641495	2003	-	-	540	0	0	2	2.00
6	GCA_003712755.1	Lacticaseibacillus paracasei	FAM3257	SAMN04088888	1990	Switzerland	-	540	0	0	2	2.00
7	GCA_005864195.1	Lacticaseibacillus paracasei	FAM 3257	SAMN11653942	1990	Switzerland	-	540	0	0	2	2.00
8	GCA_012241605.1	Lacticaseibacillus paracasei	DTA81	SAMN14517101	2016-10-22	Brazil	Homo sapiens	542	0	0	1	1.00
9	GCA_000410295.1	Lacticaseibacillus paracasei subsp. paracasei Lpp189	Lpp189	SAMN02469702	2005	-	-	546	0	0	2	2.00
10	GCA_000409895.1	Lacticaseibacillus paracasei subsp. paracasei Lpp226	Lpp226	SAMN02469716	2009	-	-	548	0	0	2	2.00
11	GCA_008016825.1	Lacticaseibacillus paracasei	SA5	SAMN11812296	2017	Spain	wild boar	550	0	0	2	2.00
12	GCA_001469115.1	Lacticaseibacillus paracasei	DPC6800	SAMN03840869	2013-02-25	Ireland	-	553	0	0	1	1.00
13	GCA_000410215.1	Lacticaseibacillus paracasei subsp. paracasei Lpp229	Lpp229	SAMN02469727	-	-	Homo sapiens	556	0	0	2	2.00
14	GCA_023656965.1	Lacticaseibacillus paracasei	ATCC 27092	SAMN11309554	1970	Japan: Kanzaki	Homo sapiens	557	0	0	2	2.00
15	GCA_030061895.1	Lacticaseibacillus paracasei	GM-080	SAMN27485237	2019-01	Taiwan: GenMont Biotech (Tainan)	Homo sapiens	557	0	0	1	1.00
16	GCA_000026485.1	Lacticaseibacillus paracasei	BL23	SAMEA2272724	-	-	-	558	0	0	1	1.00
17	GCA_965138865.1	Lacticaseibacillus paracasei	CIP109805	SAMEA117660480	-	-	-	558	0	0	2	2.00
18	GCA_002849575.1	Lacticaseibacillus paracasei	DUP 13076	SAMN08239980	2013	USA	-	559	0	0	2	2.00
19	GCA_000410415.1	Lacticaseibacillus paracasei subsp. paracasei Lpp37	Lpp37	SAMN02469718	1994	-	Homo sapiens	564	0	0	2	2.00
20	GCA_022478075.1	Lacticaseibacillus paracasei	VHProbi F22	SAMN23765140	2019-11-18	China:Inner Mongolia Autonomous Region	-	565	0	0	1	1.00
21	GCA_024665815.1	Lacticaseibacillus paracasei subsp. paracasei	01	SAMN29862210	-	-	Homo sapiens	565	0	0	1	1.00
22	GCA_024999945.1	Lacticaseibacillus paracasei	88	SAMN10365669	2003	-	-	565	0	0	2	2.00
23	GCA_025190575.1	Lacticaseibacillus paracasei	CIRM-BIA 770	SAMN10365448	1971	Japan	-	565	0	0	2	2.00
24	GCA_025190635.1	Lacticaseibacillus paracasei	CIRM-BIA 1444	SAMN10365444	2001	France	-	565	0	0	2	2.00
25	GCA_025190705.1	Lacticaseibacillus paracasei	CIRM-BIA 2130	SAMN10365441	1995	France	-	565	0	0	2	2.00
26	GCA_007292115.1	Lacticaseibacillus paracasei	CBA3611	SAMN11890849	2018-11	South Korea: Gwangju	Homo sapiens	566	0	0	1	1.00
27	GCA_011031945.1	Lacticaseibacillus paracasei	VA02-1AN	SAMN14087235	2015-08	Thailand: Khon Kean	Homo sapiens	566	0	0	2	2.00
28	GCA_022614635.1	Lacticaseibacillus paracasei	GMNL-855	SAMN22548462	2018-10-01	Taiwan: GenMont Biotech (Tainan)	Homo sapiens	566	0	0	1	1.00
29	GCA_025660485.1	Lacticaseibacillus paracasei	PB5	SAMN31096048	2022-08-25	Canada: Ontario	-	566	0	0	2	2.00
30	GCA_028320445.1	Lacticaseibacillus paracasei	1001095st2_H2_1025SCRN_200924	SAMN31322629	2020-09-24	USA	Homo sapiens	566	0	0	2	2.00
31	GCA_028321445.1	Lacticaseibacillus paracasei	1001095st2_D7_1025SCRN_200924	SAMN31322627	2020-09-24	USA	Homo sapiens	566	0	0	2	2.00
32	GCA_032290425.1	Lacticaseibacillus paracasei	ASM82903v1	SAMN37553482	2022-10-13	China	Homo sapiens	566	0	0	2	2.00
33	GCA_039650495.1	Lacticaseibacillus paracasei	DDS12	SAMN41053268	2023-11-20	India: Tamil Nadu	-	566	0	0	1	1.00
34	GCA_042657205.1	Lacticaseibacillus paracasei	L45	SAMN43851867	-	Thailand: Bangkok	Human (Breastfed infant)	566	0	0	1	1.00
35	GCA_000194765.1	Lacticaseibacillus paracasei	BD-II	SAMN02603876	-	China	-	567	0	0	1	1.00
36	GCA_000194785.1	Lacticaseibacillus paracasei	LC2W	SAMN02603877	-	China: Inner Mongolia	-	567	0	0	1	1.00
37	GCA_025631055.1	Lacticaseibacillus paracasei	PB6	SAMN31096049	2022-08-25	Canada: Ontario	-	567	0	0	2	2.00
38	GCA_028878155.1	Lacticaseibacillus paracasei	DIALYac	SAMN23708207	2012-01-30	Italy	-	567	0	0	2	2.00
39	GCA_041734755.1	Lacticaseibacillus paracasei	YGRT25	SAMN43028910	2024-07-12	South Korea	-	567	0	0	1	1.00
40	GCA_000409955.1	Lacticaseibacillus paracasei subsp. paracasei Lpp223	Lpp223	SAMN02469706	2008	-	Homo sapiens	568	0	0	2	2.00
41	GCA_003957435.1	Lacticaseibacillus paracasei subsp. tolerans	AO356	SAMN08200884	2016-10-13	South Korea: Seoul	-	569	0	0	1	1.00
42	GCA_000318035.1	Lacticaseibacillus paracasei	W56	SAMEA2271945	-	-	-	570	0	0	1	1.00
43	GCA_000410035.1	Lacticaseibacillus paracasei subsp. paracasei Lpp49	Lpp49	SAMN02469726	1996	-	-	571	0	0	2	2.00
44	GCA_039838605.1	Lacticaseibacillus paracasei	1001095st2_F6_1025SCRN_200924	SAMN31322628	2020-09-24	USA	Homo sapiens	572	0	0	2	2.00
45	GCA_033447265.1	Lacticaseibacillus paracasei	MCC 0258	SAMN38085101	2012-02	India: Maharashtra	-	573	0	0	2	2.00
46	GCA_034555135.1	Lacticaseibacillus paracasei	BF3	SAMN38857134	2021	Spain:Galicia	Brachionus plicatilis	592	0	0	2	2.00
47	GCA_000958505.1	Lacticaseibacillus paracasei NRIC 1917	-	SAMD00000557	-	-	-	594	0	0	2	2.00
48	GCA_000958525.1	Lacticaseibacillus paracasei NRIC 0644	-	SAMD00000556	-	-	-	596	0	0	2	2.00
49	GCA_028609725.1	Lacticaseibacillus paracasei	CLP-C10	SAMN14677579	2018-12	China	-	598	0	0	1	1.00
50	GCA_029625355.1	Lacticaseibacillus paracasei	VHProbi OF10	SAMN26144441	2021-01-25	China:Qingdao	-	599	0	0	1	1.00
51	GCA_007637635.1	Lacticaseibacillus paracasei	NJ	SAMN12319598	2013-06-12	China:Hubei	-	600	0	0	1	1.00
52	GCA_002079285.1	Lacticaseibacillus paracasei	IIA	SAMN04571918	2014-05-05	Indonesia: Bogor	-	601	0	0	1	1.00
53	GCA_003713005.1	Lacticaseibacillus paracasei	FAM7821	SAMN04088894	-	Switzerland	-	601	0	0	2	2.00
54	GCA_001895185.1	Lacticaseibacillus paracasei	-	SAMD00029052	-	-	-	603	0	0	2	2.00
55	GCA_003712785.1	Lacticaseibacillus paracasei	FAM6161	SAMN04088891	-	Switzerland	-	603	0	0	2	2.00
56	GCA_012932835.1	Lacticaseibacillus paracasei	CRF28	SAMN05660651	-	USA	-	604	0	0	2	2.00
57	GCA_030361365.1	Lacticaseibacillus paracasei	TOM.9	SAMN35776875	2022-04	Russia: North Ossetia	-	604	0	0	2	2.00
58	GCA_009931715.1	Lacticaseibacillus paracasei	CACC 566	SAMN13871807	2018-10	South Korea:Jeongeup-si	Canine	605	0	0	1	1.00
59	GCA_012955485.1	Lacticaseibacillus paracasei	347-16	SAMN13259076	2016	Russia: Kislovodsk	Homo sapiens	605	0	0	1	1.00
60	GCA_024637915.1	Lacticaseibacillus paracasei	VHProbi F11	SAMN27160580	2021-01-25	China:Qingdao	Homo sapiens	605	0	0	1	1.00
61	GCA_028322945.1	Lacticaseibacillus paracasei	1001295st1_G5_1001295H_181012	SAMN31322639	2018-10-12	USA	Homo sapiens	605	0	0	2	2.00
62	GCA_029906365.1	Lacticaseibacillus paracasei subsp. paracasei	MI3	SAMN34106059	2022-09-01	South Korea	Homo sapiens	605	0	0	1	1.00
63	GCA_037283365.1	Lacticaseibacillus paracasei	NRC_P5	SAMN32629232	2020-03	Egypt:Qalyubia	buffalo	605	0	0	2	2.00
64	GCA_037283435.1	Lacticaseibacillus paracasei	NRC_P6	SAMN32629233	2020-03	Egypt:Giza	buffalo	605	0	0	2	2.00
65	GCA_037283545.1	Lacticaseibacillus paracasei	NRC_P3	SAMN32629230	2020-03	Egypt:Sohag	cow	605	0	0	2	2.00
66	GCA_002904305.1	Lacticaseibacillus paracasei	CCC B1205	SAMN03813856	-	USA	-	606	0	0	2	2.00
67	GCA_000309645.1	Lacticaseibacillus paracasei	CRF28	SAMN02472005	-	USA	Homo sapiens	608	0	0	2	2.00
68	GCA_012932815.1	Lacticaseibacillus paracasei	UW1	SAMN05660434	-	USA: Wisconsin	-	608	0	0	2	2.00
69	GCA_017638905.1	Lacticaseibacillus paracasei	HL182	SAMN18236778	2005	South Korea	Homo sapiens	609	0	0	1	1.00
70	GCA_026013725.1	Lacticaseibacillus paracasei	ATG-E1	SAMN31433209	2016-01-07	South Korea: Deajeon	Hono sapiens	609	0	0	1	1.00
71	GCA_044990665.1	Lacticaseibacillus paracasei	FNCPS K7	SAMN44657157	1987-08-12	Russia: Kislovodsk	-	609	0	0	2	2.00
72	GCA_000410455.1	Lacticaseibacillus paracasei subsp. paracasei Lpp43	Lpp43	SAMN02469725	1995	-	-	610	0	0	2	2.00
73	GCA_002148805.1	Lacticaseibacillus paracasei	DPC4206	SAMN06220137	1995-07	Ireland	-	610	0	0	2	2.00
74	GCA_002148885.1	Lacticaseibacillus paracasei	DPC4536	SAMN06463780	1995-11	Ireland	-	610	0	0	2	2.00
75	GCA_003434205.1	Lacticaseibacillus paracasei	AM33-2AC	SAMN09736452	2013-12-01	China: Shenzhen	Homo sapiens	610	0	0	2	2.00
76	GCA_024498315.1	Lacticaseibacillus paracasei	SMN-LBK	SAMN29933592	2016-11-21	China: Xinjiang	-	610	0	0	1	1.00
77	GCA_024622515.1	Lacticaseibacillus paracasei	DSM 28675	SAMN29593134	2012	Germany: Freising	Mus musculus	610	0	0	2	2.00
78	GCA_028320385.1	Lacticaseibacillus paracasei	1001270st1_F8_1001270H_150608	SAMN31322638	2015-06-08	USA	Homo sapiens	610	0	0	2	2.00
79	GCA_028878105.1	Lacticaseibacillus paracasei	TMW 1.300	SAMN23708206	2012-01-30	Italy	-	610	0	0	2	2.00
80	GCA_035586595.1	Lacticaseibacillus paracasei	HP-B1337	SAMN38922877	2023-12-15	China	-	610	0	0	1	1.00
81	GCA_036281375.1	Lacticaseibacillus paracasei	CUL07A	SAMN09708453	-	-	-	610	0	0	2	2.00
82	GCA_040785095.1	Lacticaseibacillus paracasei	gbc_f	SAMN41082101	2021	USA: Glendale, Arizona	-	610	0	0	2	2.00
83	GCA_041283745.2	Lacticaseibacillus paracasei	ORD 0998	SAMN43000418	2016-01	Spain: Sevilla	Homo sapiens	610	0	0	1	1.00
84	GCA_045808845.1	Lacticaseibacillus paracasei	MSR2	SAMN45146297	2024	Bangladesh	-	610	0	0	2	2.00
85	GCA_048282615.1	Lacticaseibacillus paracasei	439	SAMN46889214	2023-12-12	China	-	610	0	0	1	1.00
86	GCA_049191845.1	Lacticaseibacillus paracasei	IATA110	SAMN45053973	2022	Spain:Valencia	Homo sapiens	610	0	0	2	2.00
87	GCA_049205075.1	Lacticaseibacillus paracasei	IATA109	SAMN45053972	2022	Spain:Valencia	Homo sapiens	610	0	0	2	2.00
88	GCA_000309785.1	Lacticaseibacillus paracasei	Lpc-37	SAMN02472013	-	-	-	611	0	0	2	2.00
89	GCA_016757675.1	Lacticaseibacillus paracasei subsp. tolerans	S-NA5	SAMN17359331	2017-12	China: Xinjiang	-	611	0	0	1	1.00
90	GCA_016757695.1	Lacticaseibacillus paracasei subsp. tolerans	S-NB	SAMN17359333	2017-12	China: Xinjiang	-	611	0	0	1	1.00
91	GCA_016890245.1	Lacticaseibacillus paracasei	YT170	SAMN17818118	2020-10-11	China: Chengdu	Rex rabbit	611	0	0	2	2.00
92	GCA_001244395.1	Lacticaseibacillus paracasei	L9	SAMN03853751	2006-10-30	China: village Bama, guangxi	Homo sapiens	612	0	0	1	1.00
93	GCA_025757505.1	Lacticaseibacillus paracasei	NG-LCU-ST2	SAMN31037893	2022-03-03	Nigeria: Ibadan, Oyo State	Maize	612	0	0	1	1.00
94	GCA_036430865.1	Lacticaseibacillus paracasei	FI11579	SAMN33193087	2018-01	Ghana:Tamale	-	612	0	0	2	2.00
95	GCA_042015765.1	Lacticaseibacillus paracasei	ZJUZ2-3	SAMN43503360	2024-02-04	China: Hangzhou	Homo sapiens	613	0	0	1	1.00
96	GCA_000410235.1	Lacticaseibacillus paracasei subsp. paracasei Lpp74	Lpp74	SAMN02469728	2000	-	-	614	0	0	2	2.00
97	GCA_001540885.1	Lacticaseibacillus paracasei	Lc1542	SAMN03702539	2012	France	bovine	614	0	0	2	2.00
98	GCA_008369945.1	Lacticaseibacillus paracasei	DTA93	SAMN12661681	2016-10-22	Brazil	Homo sapiens	615	0	0	2	2.00
99	GCA_015319235.1	Lacticaseibacillus paracasei subsp. tolerans	MGB0543	SAMN16657553	-	South Korea	-	615	0	0	1	1.00
100	GCA_025190525.1	Lacticaseibacillus paracasei	CIRM-BIA 1517	SAMN10365450	2012	France	-	615	0	0	2	2.00