GCA_029278325.1 - 12 region(s)

Region	Type	From	To	Most similar known cluster	Similarity
Region 1	NRPS	322,200	387,607	surfactin	NRP:Lipopeptide	82%
Region 2	PKS-like	936,303	977,547	butirosin A/butirosin B	Saccharide	7%
Region 3	terpene	1,059,591	1,080,331
Region 4	lanthipeptide-class-ii	1,200,824	1,229,712
Region 5	transAT-PKS	1,396,275	1,484,508	macrolactin H	Polyketide	100%
Region 6	transAT-PKS,T3PKS,NRPS	1,703,199	1,813,292	bacillaene	Polyketide+NRP	100%
Region 7	NRPS,transAT-PKS,betalactone	1,877,923	2,015,724	fengycin	NRP	100%
Region 8	terpene	2,040,951	2,062,834
Region 9	T3PKS	2,126,152	2,167,252
Region 10	transAT-PKS	2,282,238	2,388,420	difficidin	Polyketide	100%
Region 11	NRP-metallophore,NRPS,RiPP-like	3,013,124	3,064,915	bacillibactin	NRP	100%
Region 12	other	3,601,225	3,642,643	bacilysin	Other	100%

gnlProkkaEHHPBMKL_1 - Region 1 - NRPS

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Location: 322,200 - 387,607 nt. (total: 65,408 nt) Show pHMM detection rules used

NRPS: cds(Condensation and (AMP-binding or A-OX))

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core biosynthetic genes

additional biosynthetic genes

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gnlProkkaEHHPBMKL_1 - Region 2 - PKS-like

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Location: 936,303 - 977,547 nt. (total: 41,245 nt) Show pHMM detection rules used

PKS-like: (t2pks2 or ksIII)

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gnlProkkaEHHPBMKL_1 - Region 3 - terpene

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Location: 1,059,591 - 1,080,331 nt. (total: 20,741 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaEHHPBMKL_1 - Region 4 - lanthipeptide-class-ii

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Location: 1,200,824 - 1,229,712 nt. (total: 28,889 nt) Show pHMM detection rules used

lanthipeptide-class-ii: cds(LANC_like and DUF4135)

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core biosynthetic genes

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resistance

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gnlProkkaEHHPBMKL_1 - Region 5 - transAT-PKS

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Location: 1,396,275 - 1,484,508 nt. (total: 88,234 nt) Show pHMM detection rules used

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core biosynthetic genes

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resistance

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gnlProkkaEHHPBMKL_1 - Region 6 - NRPS,T3PKS,transAT-PKS

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Location: 1,703,199 - 1,813,292 nt. (total: 110,094 nt) Show pHMM detection rules used

transAT-PKS: (cds(PKS_AT and not (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS)) and (cds(ATd and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS)) or cds(tra_KS and PP-binding)))
T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)
NRPS: cds(Condensation and (AMP-binding or A-OX))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

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resistance

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gnlProkkaEHHPBMKL_1 - Region 7 - NRPS,betalactone,transAT-PKS

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Location: 1,877,923 - 2,015,724 nt. (total: 137,802 nt) Show pHMM detection rules used

NRPS: cds(Condensation and (AMP-binding or A-OX))
transAT-PKS: (cds(PKS_AT and not (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS)) and (cds(ATd and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS)) or cds(tra_KS and PP-binding)))
betalactone: (HMGL-like and AMP-binding)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaEHHPBMKL_1 - Region 8 - terpene

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Location: 2,040,951 - 2,062,834 nt. (total: 21,884 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaEHHPBMKL_1 - Region 9 - T3PKS

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Location: 2,126,152 - 2,167,252 nt. (total: 41,101 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

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other genes

resistance

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gnlProkkaEHHPBMKL_1 - Region 10 - transAT-PKS

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Location: 2,282,238 - 2,388,420 nt. (total: 106,183 nt) Show pHMM detection rules used

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

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resistance

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gnlProkkaEHHPBMKL_1 - Region 11 - NRP-metallophore,NRPS,RiPP-like

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Location: 3,013,124 - 3,064,915 nt. (total: 51,792 nt) Show pHMM detection rules used

NRP-metallophore: (VibH_like or Cy_tandem or (cds(Condensation and AMP-binding) and ((IBH_Asp and not SBH_Asp) or IBH_His or TBH_Asp or CyanoBH_Asp1 or CyanoBH_Asp2 or IPL or SalSyn or (EntA and EntC) or (GrbD and GrbE) or (FbnL and FbnM) or PvdO or PvdP or (Orn_monoox and not (KtzT or MetRS-like)) or Lys_monoox or VbsL)))
NRPS: cds(Condensation and (AMP-binding or A-OX))
RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaEHHPBMKL_1 - Region 12 - other

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Location: 3,601,225 - 3,642,643 nt. (total: 41,419 nt) Show pHMM detection rules used

other: (LmbU or Neocarzinostat or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin or orf2_PTase)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Identified secondary metabolite regions using strictness 'relaxed'

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Lanthipeptide(s) for ctg1_1188

MIBiG 3.1 matches for ctg1_1187

antiSMASH-DB 4.0 matches for ctg1_1187

MIBiG 3.1 matches for ctg1_1190

antiSMASH-DB 4.0 matches for ctg1_1190

MIBiG 3.1 matches for ctg1_1191

antiSMASH-DB 4.0 matches for ctg1_1191

Lanthipeptide(s) for ctg1_1192

MIBiG 3.1 matches for ctg1_1187

antiSMASH-DB 4.0 matches for ctg1_1187

MIBiG 3.1 matches for ctg1_1190

antiSMASH-DB 4.0 matches for ctg1_1190

MIBiG 3.1 matches for ctg1_1191

antiSMASH-DB 4.0 matches for ctg1_1191

MIBiG 3.1 matches for ctg1_1204

antiSMASH-DB 4.0 matches for ctg1_1204

MIBiG 3.1 matches for allorf_1216145_1216327

antiSMASH-DB 4.0 matches for allorf_1216145_1216327

antiSMASH-DB 4.0 matches for allorf_1222638_1222715

antiSMASH-DB 4.0 matches for allorf_1226459_1226662

antiSMASH-DB 4.0 matches for allorf_1229350_1229451

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