GCA_029764995.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaNPODODPC_2 (original name was: gnl|Prokka|NPODODPC_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	cyclic-lactone-autoinducer	24,719	45,315

gnlProkkaNPODODPC_3 (original name was: gnl|Prokka|NPODODPC_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	RiPP-like	106,779	115,529

gnlProkkaNPODODPC_4 (original name was: gnl|Prokka|NPODODPC_4)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	T3PKS	80,723	106,561

gnlProkkaNPODODPC_49 (original name was: gnl|Prokka|NPODODPC_49)

Region	Type	From	To	Most similar known cluster		Similarity
Region 43.1	terpene	26,198	47,079

Region	Type	From	To	Similarity
Region 2.1	cyclic-lactone-autoinducer	24,719	45,315
Region 3.1	RiPP-like	106,779	115,529
Region 4.1	T3PKS	80,723	106,561
Region 43.1	terpene	26,198	47,079

No secondary metabolite regions were found in these records:: gnlProkkaNPODODPC_1 (original name was: gnl|Prokka|NPODODPC_1); gnlProkkaNPODODPC_5 (original name was: gnl|Prokka|NPODODPC_5); gnlProkkaNPODODPC_6 (original name was: gnl|Prokka|NPODODPC_6); gnlProkkaNPODODPC_7 (original name was: gnl|Prokka|NPODODPC_7); gnlProkkaNPODODPC_8 (original name was: gnl|Prokka|NPODODPC_8); gnlProkkaNPODODPC_9 (original name was: gnl|Prokka|NPODODPC_9); gnlProkkaNPODODPC_10 (original name was: gnl|Prokka|NPODODPC_10); gnlProkkaNPODODPC_11 (original name was: gnl|Prokka|NPODODPC_11); gnlProkkaNPODODPC_12 (original name was: gnl|Prokka|NPODODPC_12); gnlProkkaNPODODPC_13 (original name was: gnl|Prokka|NPODODPC_13); gnlProkkaNPODODPC_14 (original name was: gnl|Prokka|NPODODPC_14); gnlProkkaNPODODPC_15 (original name was: gnl|Prokka|NPODODPC_15); gnlProkkaNPODODPC_16 (original name was: gnl|Prokka|NPODODPC_16); gnlProkkaNPODODPC_17 (original name was: gnl|Prokka|NPODODPC_17); gnlProkkaNPODODPC_18 (original name was: gnl|Prokka|NPODODPC_18); gnlProkkaNPODODPC_19 (original name was: gnl|Prokka|NPODODPC_19); gnlProkkaNPODODPC_20 (original name was: gnl|Prokka|NPODODPC_20); gnlProkkaNPODODPC_21 (original name was: gnl|Prokka|NPODODPC_21); gnlProkkaNPODODPC_22 (original name was: gnl|Prokka|NPODODPC_22); gnlProkkaNPODODPC_23 (original name was: gnl|Prokka|NPODODPC_23); gnlProkkaNPODODPC_24 (original name was: gnl|Prokka|NPODODPC_24); gnlProkkaNPODODPC_25 (original name was: gnl|Prokka|NPODODPC_25); gnlProkkaNPODODPC_26 (original name was: gnl|Prokka|NPODODPC_26); gnlProkkaNPODODPC_27 (original name was: gnl|Prokka|NPODODPC_27); gnlProkkaNPODODPC_28 (original name was: gnl|Prokka|NPODODPC_28); gnlProkkaNPODODPC_29 (original name was: gnl|Prokka|NPODODPC_29); gnlProkkaNPODODPC_30 (original name was: gnl|Prokka|NPODODPC_30); gnlProkkaNPODODPC_31 (original name was: gnl|Prokka|NPODODPC_31); gnlProkkaNPODODPC_32 (original name was: gnl|Prokka|NPODODPC_32); gnlProkkaNPODODPC_33 (original name was: gnl|Prokka|NPODODPC_33); gnlProkkaNPODODPC_34 (original name was: gnl|Prokka|NPODODPC_34); gnlProkkaNPODODPC_35 (original name was: gnl|Prokka|NPODODPC_35); gnlProkkaNPODODPC_36 (original name was: gnl|Prokka|NPODODPC_36); gnlProkkaNPODODPC_37 (original name was: gnl|Prokka|NPODODPC_37); gnlProkkaNPODODPC_38 (original name was: gnl|Prokka|NPODODPC_38); gnlProkkaNPODODPC_44 (original name was: gnl|Prokka|NPODODPC_44); gnlProkkaNPODODPC_46 (original name was: gnl|Prokka|NPODODPC_46); gnlProkkaNPODODPC_47 (original name was: gnl|Prokka|NPODODPC_47); gnlProkkaNPODODPC_48 (original name was: gnl|Prokka|NPODODPC_48); gnlProkkaNPODODPC_50 (original name was: gnl|Prokka|NPODODPC_50)

Compact view

gnlProkkaNPODODPC_2 - Region 1 - cyclic-lactone-autoinducer

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Location: 24,719 - 45,315 nt. (total: 20,597 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

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core biosynthetic genes

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNPODODPC_3 - Region 1 - RiPP-like

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Location: 106,779 - 115,529 nt. (total: 8,751 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNPODODPC_4 - Region 1 - T3PKS

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Location: 80,723 - 106,561 nt. (total: 25,839 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNPODODPC_49 - Region 1 - terpene

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Location: 26,198 - 47,079 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.