GCA_029823585.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaMHGNJJNM_3 (original name was: gnl|Prokka|MHGNJJNM_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	lanthipeptide-class-iv	8,068	30,263

gnlProkkaMHGNJJNM_7 (original name was: gnl|Prokka|MHGNJJNM_7)

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	RiPP-like	70,433	81,398

gnlProkkaMHGNJJNM_45 (original name was: gnl|Prokka|MHGNJJNM_45)

Region	Type	From	To	Most similar known cluster		Similarity
Region 40.1	lanthipeptide-class-iii	32,728	55,229

Region	Type	From	To	Similarity
Region 3.1	lanthipeptide-class-iv	8,068	30,263
Region 7.1	RiPP-like	70,433	81,398
Region 40.1	lanthipeptide-class-iii	32,728	55,229

No secondary metabolite regions were found in these records:: gnlProkkaMHGNJJNM_1 (original name was: gnl|Prokka|MHGNJJNM_1); gnlProkkaMHGNJJNM_2 (original name was: gnl|Prokka|MHGNJJNM_2); gnlProkkaMHGNJJNM_4 (original name was: gnl|Prokka|MHGNJJNM_4); gnlProkkaMHGNJJNM_5 (original name was: gnl|Prokka|MHGNJJNM_5); gnlProkkaMHGNJJNM_6 (original name was: gnl|Prokka|MHGNJJNM_6); gnlProkkaMHGNJJNM_9 (original name was: gnl|Prokka|MHGNJJNM_9); gnlProkkaMHGNJJNM_10 (original name was: gnl|Prokka|MHGNJJNM_10); gnlProkkaMHGNJJNM_11 (original name was: gnl|Prokka|MHGNJJNM_11); gnlProkkaMHGNJJNM_12 (original name was: gnl|Prokka|MHGNJJNM_12); gnlProkkaMHGNJJNM_13 (original name was: gnl|Prokka|MHGNJJNM_13); gnlProkkaMHGNJJNM_14 (original name was: gnl|Prokka|MHGNJJNM_14); gnlProkkaMHGNJJNM_15 (original name was: gnl|Prokka|MHGNJJNM_15); gnlProkkaMHGNJJNM_16 (original name was: gnl|Prokka|MHGNJJNM_16); gnlProkkaMHGNJJNM_17 (original name was: gnl|Prokka|MHGNJJNM_17); gnlProkkaMHGNJJNM_18 (original name was: gnl|Prokka|MHGNJJNM_18); gnlProkkaMHGNJJNM_19 (original name was: gnl|Prokka|MHGNJJNM_19); gnlProkkaMHGNJJNM_20 (original name was: gnl|Prokka|MHGNJJNM_20); gnlProkkaMHGNJJNM_21 (original name was: gnl|Prokka|MHGNJJNM_21); gnlProkkaMHGNJJNM_22 (original name was: gnl|Prokka|MHGNJJNM_22); gnlProkkaMHGNJJNM_23 (original name was: gnl|Prokka|MHGNJJNM_23); gnlProkkaMHGNJJNM_24 (original name was: gnl|Prokka|MHGNJJNM_24); gnlProkkaMHGNJJNM_25 (original name was: gnl|Prokka|MHGNJJNM_25); gnlProkkaMHGNJJNM_26 (original name was: gnl|Prokka|MHGNJJNM_26); gnlProkkaMHGNJJNM_27 (original name was: gnl|Prokka|MHGNJJNM_27); gnlProkkaMHGNJJNM_28 (original name was: gnl|Prokka|MHGNJJNM_28); gnlProkkaMHGNJJNM_29 (original name was: gnl|Prokka|MHGNJJNM_29); gnlProkkaMHGNJJNM_30 (original name was: gnl|Prokka|MHGNJJNM_30); gnlProkkaMHGNJJNM_32 (original name was: gnl|Prokka|MHGNJJNM_32); gnlProkkaMHGNJJNM_33 (original name was: gnl|Prokka|MHGNJJNM_33); gnlProkkaMHGNJJNM_34 (original name was: gnl|Prokka|MHGNJJNM_34); gnlProkkaMHGNJJNM_35 (original name was: gnl|Prokka|MHGNJJNM_35); gnlProkkaMHGNJJNM_36 (original name was: gnl|Prokka|MHGNJJNM_36); gnlProkkaMHGNJJNM_37 (original name was: gnl|Prokka|MHGNJJNM_37); gnlProkkaMHGNJJNM_39 (original name was: gnl|Prokka|MHGNJJNM_39); gnlProkkaMHGNJJNM_40 (original name was: gnl|Prokka|MHGNJJNM_40); gnlProkkaMHGNJJNM_41 (original name was: gnl|Prokka|MHGNJJNM_41); gnlProkkaMHGNJJNM_43 (original name was: gnl|Prokka|MHGNJJNM_43); gnlProkkaMHGNJJNM_46 (original name was: gnl|Prokka|MHGNJJNM_46); gnlProkkaMHGNJJNM_47 (original name was: gnl|Prokka|MHGNJJNM_47); gnlProkkaMHGNJJNM_48 (original name was: gnl|Prokka|MHGNJJNM_48); gnlProkkaMHGNJJNM_49 (original name was: gnl|Prokka|MHGNJJNM_49); gnlProkkaMHGNJJNM_50 (original name was: gnl|Prokka|MHGNJJNM_50); gnlProkkaMHGNJJNM_51 (original name was: gnl|Prokka|MHGNJJNM_51); gnlProkkaMHGNJJNM_52 (original name was: gnl|Prokka|MHGNJJNM_52); gnlProkkaMHGNJJNM_53 (original name was: gnl|Prokka|MHGNJJNM_53); gnlProkkaMHGNJJNM_55 (original name was: gnl|Prokka|MHGNJJNM_55); gnlProkkaMHGNJJNM_56 (original name was: gnl|Prokka|MHGNJJNM_56); gnlProkkaMHGNJJNM_57 (original name was: gnl|Prokka|MHGNJJNM_57); gnlProkkaMHGNJJNM_69 (original name was: gnl|Prokka|MHGNJJNM_69); gnlProkkaMHGNJJNM_71 (original name was: gnl|Prokka|MHGNJJNM_71); gnlProkkaMHGNJJNM_73 (original name was: gnl|Prokka|MHGNJJNM_73); gnlProkkaMHGNJJNM_78 (original name was: gnl|Prokka|MHGNJJNM_78)

Compact view

gnlProkkaMHGNJJNM_3 - Region 1 - lanthipeptide-class-iv

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Location: 8,068 - 30,263 nt. (total: 22,196 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-iv: (cds(LANC_like and Pkinase) and not micKC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.

gnlProkkaMHGNJJNM_7 - Region 1 - RiPP-like

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Location: 70,433 - 81,398 nt. (total: 10,966 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMHGNJJNM_45 - Region 1 - lanthipeptide-class-iii

Download region GenBank file

Download region SVG

Location: 32,728 - 55,229 nt. (total: 22,502 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-iii: (micKC and not PKS_KS)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.