GCA_029855105.1 - 5 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaDNLHIAJD_1 (original name was: gnl|Prokka|DNLHIAJD_1)

Region	Type	From	To
Region 1.1	RiPP-like	381,407	393,557
Region 1.2	T3PKS	1,884,489	1,925,658
Region 1.3	terpene	2,983,109	3,003,990
Region 1.4	cyclic-lactone-autoinducer	3,256,559	3,277,264

gnlProkkaDNLHIAJD_3 (original name was: gnl|Prokka|DNLHIAJD_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	RiPP-like	23,857	35,273

Region	Type	From	To	Similarity
Region 1.1	RiPP-like	381,407	393,557
Region 1.2	T3PKS	1,884,489	1,925,658
Region 1.3	terpene	2,983,109	3,003,990
Region 1.4	cyclic-lactone-autoinducer	3,256,559	3,277,264
Region 3.1	RiPP-like	23,857	35,273

No secondary metabolite regions were found in these records:: gnlProkkaDNLHIAJD_2 (original name was: gnl|Prokka|DNLHIAJD_2)

Compact view

gnlProkkaDNLHIAJD_1 - Region 1 - RiPP-like

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Location: 381,407 - 393,557 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDNLHIAJD_1 - Region 2 - T3PKS

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Location: 1,884,489 - 1,925,658 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDNLHIAJD_1 - Region 3 - terpene

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Location: 2,983,109 - 3,003,990 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDNLHIAJD_1 - Region 4 - cyclic-lactone-autoinducer

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Location: 3,256,559 - 3,277,264 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDNLHIAJD_3 - Region 1 - RiPP-like

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Location: 23,857 - 35,273 nt. (total: 11,417 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.