GCA_029874435.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaGNCPCLFG_9 (original name was: gnl|Prokka|GNCPCLFG_9)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	RiPP-like	78,148	94,369

gnlProkkaGNCPCLFG_71 (original name was: gnl|Prokka|GNCPCLFG_71)

Region	Type	From	To	Most similar known cluster		Similarity
Region 67.1	lanthipeptide-class-iv	104,843	127,470

gnlProkkaGNCPCLFG_82 (original name was: gnl|Prokka|GNCPCLFG_82)

Region	Type	From	To	Most similar known cluster		Similarity
Region 78.1	T3PKS	75,305	115,117

Region	Type	From	To	Similarity
Region 5.1	RiPP-like	78,148	94,369
Region 67.1	lanthipeptide-class-iv	104,843	127,470
Region 78.1	T3PKS	75,305	115,117

No secondary metabolite regions were found in these records:: gnlProkkaGNCPCLFG_1 (original name was: gnl|Prokka|GNCPCLFG_1); gnlProkkaGNCPCLFG_2 (original name was: gnl|Prokka|GNCPCLFG_2); gnlProkkaGNCPCLFG_7 (original name was: gnl|Prokka|GNCPCLFG_7); gnlProkkaGNCPCLFG_8 (original name was: gnl|Prokka|GNCPCLFG_8); gnlProkkaGNCPCLFG_10 (original name was: gnl|Prokka|GNCPCLFG_10); gnlProkkaGNCPCLFG_11 (original name was: gnl|Prokka|GNCPCLFG_11); gnlProkkaGNCPCLFG_12 (original name was: gnl|Prokka|GNCPCLFG_12); gnlProkkaGNCPCLFG_13 (original name was: gnl|Prokka|GNCPCLFG_13); gnlProkkaGNCPCLFG_14 (original name was: gnl|Prokka|GNCPCLFG_14); gnlProkkaGNCPCLFG_15 (original name was: gnl|Prokka|GNCPCLFG_15); gnlProkkaGNCPCLFG_16 (original name was: gnl|Prokka|GNCPCLFG_16); gnlProkkaGNCPCLFG_17 (original name was: gnl|Prokka|GNCPCLFG_17); gnlProkkaGNCPCLFG_18 (original name was: gnl|Prokka|GNCPCLFG_18); gnlProkkaGNCPCLFG_19 (original name was: gnl|Prokka|GNCPCLFG_19); gnlProkkaGNCPCLFG_20 (original name was: gnl|Prokka|GNCPCLFG_20); gnlProkkaGNCPCLFG_21 (original name was: gnl|Prokka|GNCPCLFG_21); gnlProkkaGNCPCLFG_22 (original name was: gnl|Prokka|GNCPCLFG_22); gnlProkkaGNCPCLFG_23 (original name was: gnl|Prokka|GNCPCLFG_23); gnlProkkaGNCPCLFG_24 (original name was: gnl|Prokka|GNCPCLFG_24); gnlProkkaGNCPCLFG_25 (original name was: gnl|Prokka|GNCPCLFG_25); gnlProkkaGNCPCLFG_26 (original name was: gnl|Prokka|GNCPCLFG_26); gnlProkkaGNCPCLFG_27 (original name was: gnl|Prokka|GNCPCLFG_27); gnlProkkaGNCPCLFG_28 (original name was: gnl|Prokka|GNCPCLFG_28); gnlProkkaGNCPCLFG_29 (original name was: gnl|Prokka|GNCPCLFG_29); gnlProkkaGNCPCLFG_30 (original name was: gnl|Prokka|GNCPCLFG_30); gnlProkkaGNCPCLFG_31 (original name was: gnl|Prokka|GNCPCLFG_31); gnlProkkaGNCPCLFG_32 (original name was: gnl|Prokka|GNCPCLFG_32); gnlProkkaGNCPCLFG_33 (original name was: gnl|Prokka|GNCPCLFG_33); gnlProkkaGNCPCLFG_34 (original name was: gnl|Prokka|GNCPCLFG_34); gnlProkkaGNCPCLFG_35 (original name was: gnl|Prokka|GNCPCLFG_35); gnlProkkaGNCPCLFG_36 (original name was: gnl|Prokka|GNCPCLFG_36); gnlProkkaGNCPCLFG_37 (original name was: gnl|Prokka|GNCPCLFG_37); gnlProkkaGNCPCLFG_38 (original name was: gnl|Prokka|GNCPCLFG_38); gnlProkkaGNCPCLFG_39 (original name was: gnl|Prokka|GNCPCLFG_39); gnlProkkaGNCPCLFG_40 (original name was: gnl|Prokka|GNCPCLFG_40); gnlProkkaGNCPCLFG_41 (original name was: gnl|Prokka|GNCPCLFG_41); gnlProkkaGNCPCLFG_42 (original name was: gnl|Prokka|GNCPCLFG_42); gnlProkkaGNCPCLFG_43 (original name was: gnl|Prokka|GNCPCLFG_43); gnlProkkaGNCPCLFG_44 (original name was: gnl|Prokka|GNCPCLFG_44); gnlProkkaGNCPCLFG_45 (original name was: gnl|Prokka|GNCPCLFG_45); gnlProkkaGNCPCLFG_46 (original name was: gnl|Prokka|GNCPCLFG_46); gnlProkkaGNCPCLFG_47 (original name was: gnl|Prokka|GNCPCLFG_47); gnlProkkaGNCPCLFG_48 (original name was: gnl|Prokka|GNCPCLFG_48); gnlProkkaGNCPCLFG_49 (original name was: gnl|Prokka|GNCPCLFG_49); gnlProkkaGNCPCLFG_50 (original name was: gnl|Prokka|GNCPCLFG_50); gnlProkkaGNCPCLFG_51 (original name was: gnl|Prokka|GNCPCLFG_51); gnlProkkaGNCPCLFG_52 (original name was: gnl|Prokka|GNCPCLFG_52); gnlProkkaGNCPCLFG_53 (original name was: gnl|Prokka|GNCPCLFG_53); gnlProkkaGNCPCLFG_54 (original name was: gnl|Prokka|GNCPCLFG_54); gnlProkkaGNCPCLFG_55 (original name was: gnl|Prokka|GNCPCLFG_55); gnlProkkaGNCPCLFG_56 (original name was: gnl|Prokka|GNCPCLFG_56); gnlProkkaGNCPCLFG_57 (original name was: gnl|Prokka|GNCPCLFG_57); gnlProkkaGNCPCLFG_58 (original name was: gnl|Prokka|GNCPCLFG_58); gnlProkkaGNCPCLFG_59 (original name was: gnl|Prokka|GNCPCLFG_59); gnlProkkaGNCPCLFG_60 (original name was: gnl|Prokka|GNCPCLFG_60); gnlProkkaGNCPCLFG_61 (original name was: gnl|Prokka|GNCPCLFG_61); gnlProkkaGNCPCLFG_62 (original name was: gnl|Prokka|GNCPCLFG_62); gnlProkkaGNCPCLFG_63 (original name was: gnl|Prokka|GNCPCLFG_63); gnlProkkaGNCPCLFG_64 (original name was: gnl|Prokka|GNCPCLFG_64); gnlProkkaGNCPCLFG_65 (original name was: gnl|Prokka|GNCPCLFG_65); gnlProkkaGNCPCLFG_66 (original name was: gnl|Prokka|GNCPCLFG_66); gnlProkkaGNCPCLFG_67 (original name was: gnl|Prokka|GNCPCLFG_67); gnlProkkaGNCPCLFG_68 (original name was: gnl|Prokka|GNCPCLFG_68); gnlProkkaGNCPCLFG_69 (original name was: gnl|Prokka|GNCPCLFG_69); gnlProkkaGNCPCLFG_70 (original name was: gnl|Prokka|GNCPCLFG_70); gnlProkkaGNCPCLFG_72 (original name was: gnl|Prokka|GNCPCLFG_72); gnlProkkaGNCPCLFG_73 (original name was: gnl|Prokka|GNCPCLFG_73); gnlProkkaGNCPCLFG_74 (original name was: gnl|Prokka|GNCPCLFG_74); gnlProkkaGNCPCLFG_75 (original name was: gnl|Prokka|GNCPCLFG_75); gnlProkkaGNCPCLFG_76 (original name was: gnl|Prokka|GNCPCLFG_76); gnlProkkaGNCPCLFG_77 (original name was: gnl|Prokka|GNCPCLFG_77); gnlProkkaGNCPCLFG_78 (original name was: gnl|Prokka|GNCPCLFG_78); gnlProkkaGNCPCLFG_79 (original name was: gnl|Prokka|GNCPCLFG_79); gnlProkkaGNCPCLFG_80 (original name was: gnl|Prokka|GNCPCLFG_80); gnlProkkaGNCPCLFG_81 (original name was: gnl|Prokka|GNCPCLFG_81); gnlProkkaGNCPCLFG_83 (original name was: gnl|Prokka|GNCPCLFG_83); gnlProkkaGNCPCLFG_84 (original name was: gnl|Prokka|GNCPCLFG_84); gnlProkkaGNCPCLFG_85 (original name was: gnl|Prokka|GNCPCLFG_85); gnlProkkaGNCPCLFG_86 (original name was: gnl|Prokka|GNCPCLFG_86); gnlProkkaGNCPCLFG_87 (original name was: gnl|Prokka|GNCPCLFG_87); gnlProkkaGNCPCLFG_93 (original name was: gnl|Prokka|GNCPCLFG_93)

Compact view

gnlProkkaGNCPCLFG_9 - Region 1 - RiPP-like

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Location: 78,148 - 94,369 nt. (total: 16,222 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaGNCPCLFG_71 - Region 1 - lanthipeptide-class-iv

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Location: 104,843 - 127,470 nt. (total: 22,628 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-iv: (cds(LANC_like and Pkinase) and not micKC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.

gnlProkkaGNCPCLFG_82 - Region 1 - T3PKS

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Location: 75,305 - 115,117 nt. (total: 39,813 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.