GCA_029906245.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaNJDHGFIL_2 (original name was: gnl|Prokka|NJDHGFIL_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	cyclic-lactone-autoinducer	24,441	45,037

gnlProkkaNJDHGFIL_3 (original name was: gnl|Prokka|NJDHGFIL_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	RiPP-like	106,779	115,529

gnlProkkaNJDHGFIL_4 (original name was: gnl|Prokka|NJDHGFIL_4)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	T3PKS	1	31,227

gnlProkkaNJDHGFIL_51 (original name was: gnl|Prokka|NJDHGFIL_51)

Region	Type	From	To	Most similar known cluster		Similarity
Region 44.1	terpene	26,198	47,079

Region	Type	From	To	Similarity
Region 2.1	cyclic-lactone-autoinducer	24,441	45,037
Region 3.1	RiPP-like	106,779	115,529
Region 4.1	T3PKS	1	31,227
Region 44.1	terpene	26,198	47,079

No secondary metabolite regions were found in these records:: gnlProkkaNJDHGFIL_1 (original name was: gnl|Prokka|NJDHGFIL_1); gnlProkkaNJDHGFIL_5 (original name was: gnl|Prokka|NJDHGFIL_5); gnlProkkaNJDHGFIL_6 (original name was: gnl|Prokka|NJDHGFIL_6); gnlProkkaNJDHGFIL_7 (original name was: gnl|Prokka|NJDHGFIL_7); gnlProkkaNJDHGFIL_8 (original name was: gnl|Prokka|NJDHGFIL_8); gnlProkkaNJDHGFIL_9 (original name was: gnl|Prokka|NJDHGFIL_9); gnlProkkaNJDHGFIL_10 (original name was: gnl|Prokka|NJDHGFIL_10); gnlProkkaNJDHGFIL_11 (original name was: gnl|Prokka|NJDHGFIL_11); gnlProkkaNJDHGFIL_12 (original name was: gnl|Prokka|NJDHGFIL_12); gnlProkkaNJDHGFIL_13 (original name was: gnl|Prokka|NJDHGFIL_13); gnlProkkaNJDHGFIL_14 (original name was: gnl|Prokka|NJDHGFIL_14); gnlProkkaNJDHGFIL_15 (original name was: gnl|Prokka|NJDHGFIL_15); gnlProkkaNJDHGFIL_16 (original name was: gnl|Prokka|NJDHGFIL_16); gnlProkkaNJDHGFIL_17 (original name was: gnl|Prokka|NJDHGFIL_17); gnlProkkaNJDHGFIL_18 (original name was: gnl|Prokka|NJDHGFIL_18); gnlProkkaNJDHGFIL_19 (original name was: gnl|Prokka|NJDHGFIL_19); gnlProkkaNJDHGFIL_20 (original name was: gnl|Prokka|NJDHGFIL_20); gnlProkkaNJDHGFIL_21 (original name was: gnl|Prokka|NJDHGFIL_21); gnlProkkaNJDHGFIL_22 (original name was: gnl|Prokka|NJDHGFIL_22); gnlProkkaNJDHGFIL_23 (original name was: gnl|Prokka|NJDHGFIL_23); gnlProkkaNJDHGFIL_24 (original name was: gnl|Prokka|NJDHGFIL_24); gnlProkkaNJDHGFIL_25 (original name was: gnl|Prokka|NJDHGFIL_25); gnlProkkaNJDHGFIL_26 (original name was: gnl|Prokka|NJDHGFIL_26); gnlProkkaNJDHGFIL_27 (original name was: gnl|Prokka|NJDHGFIL_27); gnlProkkaNJDHGFIL_28 (original name was: gnl|Prokka|NJDHGFIL_28); gnlProkkaNJDHGFIL_29 (original name was: gnl|Prokka|NJDHGFIL_29); gnlProkkaNJDHGFIL_30 (original name was: gnl|Prokka|NJDHGFIL_30); gnlProkkaNJDHGFIL_31 (original name was: gnl|Prokka|NJDHGFIL_31); gnlProkkaNJDHGFIL_32 (original name was: gnl|Prokka|NJDHGFIL_32); gnlProkkaNJDHGFIL_33 (original name was: gnl|Prokka|NJDHGFIL_33); gnlProkkaNJDHGFIL_34 (original name was: gnl|Prokka|NJDHGFIL_34); gnlProkkaNJDHGFIL_35 (original name was: gnl|Prokka|NJDHGFIL_35); gnlProkkaNJDHGFIL_36 (original name was: gnl|Prokka|NJDHGFIL_36); gnlProkkaNJDHGFIL_37 (original name was: gnl|Prokka|NJDHGFIL_37); gnlProkkaNJDHGFIL_38 (original name was: gnl|Prokka|NJDHGFIL_38); gnlProkkaNJDHGFIL_39 (original name was: gnl|Prokka|NJDHGFIL_39); gnlProkkaNJDHGFIL_40 (original name was: gnl|Prokka|NJDHGFIL_40); gnlProkkaNJDHGFIL_41 (original name was: gnl|Prokka|NJDHGFIL_41); gnlProkkaNJDHGFIL_42 (original name was: gnl|Prokka|NJDHGFIL_42); gnlProkkaNJDHGFIL_44 (original name was: gnl|Prokka|NJDHGFIL_44); gnlProkkaNJDHGFIL_52 (original name was: gnl|Prokka|NJDHGFIL_52); gnlProkkaNJDHGFIL_53 (original name was: gnl|Prokka|NJDHGFIL_53); gnlProkkaNJDHGFIL_54 (original name was: gnl|Prokka|NJDHGFIL_54); gnlProkkaNJDHGFIL_55 (original name was: gnl|Prokka|NJDHGFIL_55)

Compact view

gnlProkkaNJDHGFIL_2 - Region 1 - cyclic-lactone-autoinducer

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Location: 24,441 - 45,037 nt. (total: 20,597 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNJDHGFIL_3 - Region 1 - RiPP-like

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Location: 106,779 - 115,529 nt. (total: 8,751 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNJDHGFIL_4 - Region 1 - T3PKS

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Location: 1 - 31,227 nt. (total: 31,227 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNJDHGFIL_51 - Region 1 - terpene

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Location: 26,198 - 47,079 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.