QueryID	Family	Cluster	IsBegin	IsEnd	IrId	IrLen	Ngaps	OrfBegin	OrfEnd	Strand	OrfLen	Evalue	Type
JAPHLIII_1	IS21	IS21_259	36	1506	17	21	0	101	1468	+	1368	3.9e-15	p
JAPHLIII_1	IS1182	IS1182_42	107001	108804	18	19	0	0	0		1	3.5e-144	c
JAPHLIII_1	IS1182	IS1182_42	208746	210549	19	19	0	208900	210552	+	1653	3.5e-144	c
JAPHLIII_1	IS110	IS110_113	260413	261922	13	18	0	0	0		1	2.4e-53	c
JAPHLIII_1	IS1182	IS1182_42	296145	297948	19	19	0	0	0		1	3.5e-144	c
JAPHLIII_1	IS30	IS30_223	322832	323887	22	27	0	322933	323856	+	924	9.1e-101	c
JAPHLIII_1	IS30	IS30_223	353880	354937	23	28	0	353982	354905	+	924	9.1e-101	c
JAPHLIII_1	IS1380	IS1380_105	374991	375486	15	21	0	374924	375592	-	669	1e-10	p
JAPHLIII_1	IS30	IS30_223	641490	642545	22	27	0	641591	642514	+	924	9.1e-101	c
JAPHLIII_1	IS3	IS3_176	823768	825393	20	22	0	824183	825359	+	1177	2.8e-12	p
JAPHLIII_1	IS30	IS30_173	978872	980016	28	37	0	978893	979892	-	1000	1.5e-19	p
JAPHLIII_1	IS110	IS110_113	1417279	1418788	13	18	0	1417359	1418534	-	1176	2.4e-53	c
JAPHLIII_1	IS110	IS110_113	1554467	1555976	13	18	0	1554721	1555896	+	1176	2.4e-53	c
JAPHLIII_1	IS110	IS110_113	1562434	1563944	13	18	0	1562515	1563690	-	1176	2.4e-53	c
JAPHLIII_1	ISL3	ISL3_126	1751635	1753067	18	25	0	1751759	1753021	+	1263	6.8e-55	c
JAPHLIII_1	IS3	IS3_97	1832338	1833616	0	0	0	1832338	1833616	-	1279	8.3e-33	p
JAPHLIII_1	IS1182	IS1182_42	1879496	1881291	15	15	0	0	0		1	3.5e-144	c
JAPHLIII_1	IS1182	IS1182_42	1916140	1917935	15	15	0	0	0		1	3.5e-144	c
JAPHLIII_1	ISL3	ISL3_126	1923477	1924909	18	25	0	1923601	1924863	+	1263	6.8e-55	c
JAPHLIII_1	IS1182	IS1182_42	2180315	2182118	19	19	0	0	0		1	3.5e-144	c
JAPHLIII_1	ISL3	ISL3_126	2264901	2266333	18	25	0	2265025	2266287	+	1263	6.8e-55	c
JAPHLIII_1	IS1182	IS1182_42	2301461	2303258	16	16	0	0	0		1	3.5e-144	c
JAPHLIII_1	ISL3	ISL3_126	2391950	2393382	18	25	0	0	0		1	6.8e-55	c
JAPHLIII_1	IS110	IS110_113	2476259	2477768	13	18	0	2476513	2477688	+	1176	2.4e-53	c
JAPHLIII_1	IS110	IS110_113	2634987	2636497	13	18	0	2635241	2636416	+	1176	2.4e-53	c
JAPHLIII_1	IS3	IS3_97	2798344	2799416	9	9	0	0	0		1	8.3e-33	p
JAPHLIII_1	IS3	IS3_176	2824056	2825779	52	77	0	2824122	2825697	-	1576	2.9e-21	p
JAPHLIII_1	IS110	IS110_113	2969251	2970760	13	18	0	2969331	2970506	-	1176	2.4e-53	c
JAPHLIII_1	IS30	IS30_223	3120436	3121491	22	27	0	0	0		1	9.1e-101	c
JAPHLIII_1	IS30	IS30_223	3220310	3221363	21	26	0	3220410	3221333	+	924	9.1e-101	c
JAPHLIII_1	IS30	IS30_173	3222303	3223729	21	30	0	3222713	3223801	-	1089	5.5e-75	c
JAPHLIII_1	ISL3	ISL3_126	3271949	3273379	18	25	0	0	0		1	6.8e-55	c