GCA_030403475.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaBIFABIKF_2 (original name was: gnl|Prokka|BIFABIKF_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	cyclic-lactone-autoinducer	24,719	45,315

gnlProkkaBIFABIKF_3 (original name was: gnl|Prokka|BIFABIKF_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	RiPP-like	106,779	115,571

gnlProkkaBIFABIKF_4 (original name was: gnl|Prokka|BIFABIKF_4)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	T3PKS	80,723	106,561

gnlProkkaBIFABIKF_49 (original name was: gnl|Prokka|BIFABIKF_49)

Region	Type	From	To	Most similar known cluster		Similarity
Region 42.1	terpene	26,198	47,079

Region	Type	From	To	Similarity
Region 2.1	cyclic-lactone-autoinducer	24,719	45,315
Region 3.1	RiPP-like	106,779	115,571
Region 4.1	T3PKS	80,723	106,561
Region 42.1	terpene	26,198	47,079

No secondary metabolite regions were found in these records:: gnlProkkaBIFABIKF_1 (original name was: gnl|Prokka|BIFABIKF_1); gnlProkkaBIFABIKF_5 (original name was: gnl|Prokka|BIFABIKF_5); gnlProkkaBIFABIKF_6 (original name was: gnl|Prokka|BIFABIKF_6); gnlProkkaBIFABIKF_7 (original name was: gnl|Prokka|BIFABIKF_7); gnlProkkaBIFABIKF_8 (original name was: gnl|Prokka|BIFABIKF_8); gnlProkkaBIFABIKF_9 (original name was: gnl|Prokka|BIFABIKF_9); gnlProkkaBIFABIKF_10 (original name was: gnl|Prokka|BIFABIKF_10); gnlProkkaBIFABIKF_11 (original name was: gnl|Prokka|BIFABIKF_11); gnlProkkaBIFABIKF_12 (original name was: gnl|Prokka|BIFABIKF_12); gnlProkkaBIFABIKF_13 (original name was: gnl|Prokka|BIFABIKF_13); gnlProkkaBIFABIKF_14 (original name was: gnl|Prokka|BIFABIKF_14); gnlProkkaBIFABIKF_15 (original name was: gnl|Prokka|BIFABIKF_15); gnlProkkaBIFABIKF_16 (original name was: gnl|Prokka|BIFABIKF_16); gnlProkkaBIFABIKF_17 (original name was: gnl|Prokka|BIFABIKF_17); gnlProkkaBIFABIKF_18 (original name was: gnl|Prokka|BIFABIKF_18); gnlProkkaBIFABIKF_19 (original name was: gnl|Prokka|BIFABIKF_19); gnlProkkaBIFABIKF_20 (original name was: gnl|Prokka|BIFABIKF_20); gnlProkkaBIFABIKF_21 (original name was: gnl|Prokka|BIFABIKF_21); gnlProkkaBIFABIKF_22 (original name was: gnl|Prokka|BIFABIKF_22); gnlProkkaBIFABIKF_23 (original name was: gnl|Prokka|BIFABIKF_23); gnlProkkaBIFABIKF_24 (original name was: gnl|Prokka|BIFABIKF_24); gnlProkkaBIFABIKF_25 (original name was: gnl|Prokka|BIFABIKF_25); gnlProkkaBIFABIKF_26 (original name was: gnl|Prokka|BIFABIKF_26); gnlProkkaBIFABIKF_27 (original name was: gnl|Prokka|BIFABIKF_27); gnlProkkaBIFABIKF_28 (original name was: gnl|Prokka|BIFABIKF_28); gnlProkkaBIFABIKF_29 (original name was: gnl|Prokka|BIFABIKF_29); gnlProkkaBIFABIKF_30 (original name was: gnl|Prokka|BIFABIKF_30); gnlProkkaBIFABIKF_31 (original name was: gnl|Prokka|BIFABIKF_31); gnlProkkaBIFABIKF_32 (original name was: gnl|Prokka|BIFABIKF_32); gnlProkkaBIFABIKF_33 (original name was: gnl|Prokka|BIFABIKF_33); gnlProkkaBIFABIKF_34 (original name was: gnl|Prokka|BIFABIKF_34); gnlProkkaBIFABIKF_35 (original name was: gnl|Prokka|BIFABIKF_35); gnlProkkaBIFABIKF_36 (original name was: gnl|Prokka|BIFABIKF_36); gnlProkkaBIFABIKF_37 (original name was: gnl|Prokka|BIFABIKF_37); gnlProkkaBIFABIKF_44 (original name was: gnl|Prokka|BIFABIKF_44); gnlProkkaBIFABIKF_46 (original name was: gnl|Prokka|BIFABIKF_46); gnlProkkaBIFABIKF_47 (original name was: gnl|Prokka|BIFABIKF_47); gnlProkkaBIFABIKF_48 (original name was: gnl|Prokka|BIFABIKF_48); gnlProkkaBIFABIKF_50 (original name was: gnl|Prokka|BIFABIKF_50)

Compact view

gnlProkkaBIFABIKF_2 - Region 1 - cyclic-lactone-autoinducer

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Location: 24,719 - 45,315 nt. (total: 20,597 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaBIFABIKF_3 - Region 1 - RiPP-like

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Location: 106,779 - 115,571 nt. (total: 8,793 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaBIFABIKF_4 - Region 1 - T3PKS

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Location: 80,723 - 106,561 nt. (total: 25,839 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaBIFABIKF_49 - Region 1 - terpene

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Location: 26,198 - 47,079 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.