GCA_030464405.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaKAMDLPIO_6 (original name was: gnl|Prokka|KAMDLPIO_6)

Region	Type	From	To	Most similar known cluster		Similarity
Region 6.1	cyclic-lactone-autoinducer	22,105	42,810

gnlProkkaKAMDLPIO_12 (original name was: gnl|Prokka|KAMDLPIO_12)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	terpene	240,395	261,276

gnlProkkaKAMDLPIO_23 (original name was: gnl|Prokka|KAMDLPIO_23)

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	RiPP-like	107,194	119,344

gnlProkkaKAMDLPIO_36 (original name was: gnl|Prokka|KAMDLPIO_36)

Region	Type	From	To	Most similar known cluster		Similarity
Region 35.1	T3PKS	68,795	109,964

Region	Type	From	To	Similarity
Region 6.1	cyclic-lactone-autoinducer	22,105	42,810
Region 12.1	terpene	240,395	261,276
Region 23.1	RiPP-like	107,194	119,344
Region 35.1	T3PKS	68,795	109,964

No secondary metabolite regions were found in these records:: gnlProkkaKAMDLPIO_1 (original name was: gnl|Prokka|KAMDLPIO_1); gnlProkkaKAMDLPIO_2 (original name was: gnl|Prokka|KAMDLPIO_2); gnlProkkaKAMDLPIO_3 (original name was: gnl|Prokka|KAMDLPIO_3); gnlProkkaKAMDLPIO_4 (original name was: gnl|Prokka|KAMDLPIO_4); gnlProkkaKAMDLPIO_5 (original name was: gnl|Prokka|KAMDLPIO_5); gnlProkkaKAMDLPIO_7 (original name was: gnl|Prokka|KAMDLPIO_7); gnlProkkaKAMDLPIO_8 (original name was: gnl|Prokka|KAMDLPIO_8); gnlProkkaKAMDLPIO_9 (original name was: gnl|Prokka|KAMDLPIO_9); gnlProkkaKAMDLPIO_10 (original name was: gnl|Prokka|KAMDLPIO_10); gnlProkkaKAMDLPIO_11 (original name was: gnl|Prokka|KAMDLPIO_11); gnlProkkaKAMDLPIO_13 (original name was: gnl|Prokka|KAMDLPIO_13); gnlProkkaKAMDLPIO_14 (original name was: gnl|Prokka|KAMDLPIO_14); gnlProkkaKAMDLPIO_15 (original name was: gnl|Prokka|KAMDLPIO_15); gnlProkkaKAMDLPIO_16 (original name was: gnl|Prokka|KAMDLPIO_16); gnlProkkaKAMDLPIO_17 (original name was: gnl|Prokka|KAMDLPIO_17); gnlProkkaKAMDLPIO_18 (original name was: gnl|Prokka|KAMDLPIO_18); gnlProkkaKAMDLPIO_19 (original name was: gnl|Prokka|KAMDLPIO_19); gnlProkkaKAMDLPIO_20 (original name was: gnl|Prokka|KAMDLPIO_20); gnlProkkaKAMDLPIO_21 (original name was: gnl|Prokka|KAMDLPIO_21); gnlProkkaKAMDLPIO_22 (original name was: gnl|Prokka|KAMDLPIO_22); gnlProkkaKAMDLPIO_24 (original name was: gnl|Prokka|KAMDLPIO_24); gnlProkkaKAMDLPIO_25 (original name was: gnl|Prokka|KAMDLPIO_25); gnlProkkaKAMDLPIO_26 (original name was: gnl|Prokka|KAMDLPIO_26); gnlProkkaKAMDLPIO_27 (original name was: gnl|Prokka|KAMDLPIO_27); gnlProkkaKAMDLPIO_28 (original name was: gnl|Prokka|KAMDLPIO_28); gnlProkkaKAMDLPIO_29 (original name was: gnl|Prokka|KAMDLPIO_29); gnlProkkaKAMDLPIO_30 (original name was: gnl|Prokka|KAMDLPIO_30); gnlProkkaKAMDLPIO_31 (original name was: gnl|Prokka|KAMDLPIO_31); gnlProkkaKAMDLPIO_32 (original name was: gnl|Prokka|KAMDLPIO_32); gnlProkkaKAMDLPIO_34 (original name was: gnl|Prokka|KAMDLPIO_34); gnlProkkaKAMDLPIO_35 (original name was: gnl|Prokka|KAMDLPIO_35); gnlProkkaKAMDLPIO_37 (original name was: gnl|Prokka|KAMDLPIO_37); gnlProkkaKAMDLPIO_38 (original name was: gnl|Prokka|KAMDLPIO_38); gnlProkkaKAMDLPIO_39 (original name was: gnl|Prokka|KAMDLPIO_39)

Compact view

gnlProkkaKAMDLPIO_6 - Region 1 - cyclic-lactone-autoinducer

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Location: 22,105 - 42,810 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaKAMDLPIO_12 - Region 1 - terpene

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Location: 240,395 - 261,276 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaKAMDLPIO_23 - Region 1 - RiPP-like

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Location: 107,194 - 119,344 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaKAMDLPIO_36 - Region 1 - T3PKS

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Location: 68,795 - 109,964 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

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Similar known gene clusters from MIBiG 3.1

No matches found.