GCA_030464485.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaCCADMIDK_12 (original name was: gnl|Prokka|CCADMIDK_12)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	RiPP-like	264,027	276,177

gnlProkkaCCADMIDK_23 (original name was: gnl|Prokka|CCADMIDK_23)

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	T3PKS	167,848	209,017

gnlProkkaCCADMIDK_33 (original name was: gnl|Prokka|CCADMIDK_33)

Region	Type	From	To	Most similar known cluster		Similarity
Region 32.1	cyclic-lactone-autoinducer	2,804	23,509

gnlProkkaCCADMIDK_36 (original name was: gnl|Prokka|CCADMIDK_36)

Region	Type	From	To	Most similar known cluster		Similarity
Region 35.1	terpene	29,875	50,756

Region	Type	From	To	Similarity
Region 12.1	RiPP-like	264,027	276,177
Region 23.1	T3PKS	167,848	209,017
Region 32.1	cyclic-lactone-autoinducer	2,804	23,509
Region 35.1	terpene	29,875	50,756

No secondary metabolite regions were found in these records:: gnlProkkaCCADMIDK_1 (original name was: gnl|Prokka|CCADMIDK_1); gnlProkkaCCADMIDK_2 (original name was: gnl|Prokka|CCADMIDK_2); gnlProkkaCCADMIDK_3 (original name was: gnl|Prokka|CCADMIDK_3); gnlProkkaCCADMIDK_4 (original name was: gnl|Prokka|CCADMIDK_4); gnlProkkaCCADMIDK_5 (original name was: gnl|Prokka|CCADMIDK_5); gnlProkkaCCADMIDK_6 (original name was: gnl|Prokka|CCADMIDK_6); gnlProkkaCCADMIDK_7 (original name was: gnl|Prokka|CCADMIDK_7); gnlProkkaCCADMIDK_8 (original name was: gnl|Prokka|CCADMIDK_8); gnlProkkaCCADMIDK_9 (original name was: gnl|Prokka|CCADMIDK_9); gnlProkkaCCADMIDK_10 (original name was: gnl|Prokka|CCADMIDK_10); gnlProkkaCCADMIDK_11 (original name was: gnl|Prokka|CCADMIDK_11); gnlProkkaCCADMIDK_13 (original name was: gnl|Prokka|CCADMIDK_13); gnlProkkaCCADMIDK_14 (original name was: gnl|Prokka|CCADMIDK_14); gnlProkkaCCADMIDK_15 (original name was: gnl|Prokka|CCADMIDK_15); gnlProkkaCCADMIDK_16 (original name was: gnl|Prokka|CCADMIDK_16); gnlProkkaCCADMIDK_17 (original name was: gnl|Prokka|CCADMIDK_17); gnlProkkaCCADMIDK_18 (original name was: gnl|Prokka|CCADMIDK_18); gnlProkkaCCADMIDK_19 (original name was: gnl|Prokka|CCADMIDK_19); gnlProkkaCCADMIDK_20 (original name was: gnl|Prokka|CCADMIDK_20); gnlProkkaCCADMIDK_21 (original name was: gnl|Prokka|CCADMIDK_21); gnlProkkaCCADMIDK_22 (original name was: gnl|Prokka|CCADMIDK_22); gnlProkkaCCADMIDK_24 (original name was: gnl|Prokka|CCADMIDK_24); gnlProkkaCCADMIDK_25 (original name was: gnl|Prokka|CCADMIDK_25); gnlProkkaCCADMIDK_26 (original name was: gnl|Prokka|CCADMIDK_26); gnlProkkaCCADMIDK_27 (original name was: gnl|Prokka|CCADMIDK_27); gnlProkkaCCADMIDK_28 (original name was: gnl|Prokka|CCADMIDK_28); gnlProkkaCCADMIDK_29 (original name was: gnl|Prokka|CCADMIDK_29); gnlProkkaCCADMIDK_31 (original name was: gnl|Prokka|CCADMIDK_31); gnlProkkaCCADMIDK_32 (original name was: gnl|Prokka|CCADMIDK_32); gnlProkkaCCADMIDK_34 (original name was: gnl|Prokka|CCADMIDK_34); gnlProkkaCCADMIDK_35 (original name was: gnl|Prokka|CCADMIDK_35)

Compact view

gnlProkkaCCADMIDK_12 - Region 1 - RiPP-like

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Location: 264,027 - 276,177 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaCCADMIDK_23 - Region 1 - T3PKS

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Location: 167,848 - 209,017 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaCCADMIDK_33 - Region 1 - cyclic-lactone-autoinducer

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Location: 2,804 - 23,509 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaCCADMIDK_36 - Region 1 - terpene

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Location: 29,875 - 50,756 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.