GCA_030464525.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaPGPBBNNF_9 (original name was: gnl|Prokka|PGPBBNNF_9)

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	RiPP-like	109,036	121,186

gnlProkkaPGPBBNNF_11 (original name was: gnl|Prokka|PGPBBNNF_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	terpene	26,248	47,129

gnlProkkaPGPBBNNF_13 (original name was: gnl|Prokka|PGPBBNNF_13)

Region	Type	From	To	Most similar known cluster		Similarity
Region 13.1	cyclic-lactone-autoinducer	9,763	30,468

gnlProkkaPGPBBNNF_14 (original name was: gnl|Prokka|PGPBBNNF_14)

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	T3PKS	1	35,689

Region	Type	From	To	Similarity
Region 9.1	RiPP-like	109,036	121,186
Region 11.1	terpene	26,248	47,129
Region 13.1	cyclic-lactone-autoinducer	9,763	30,468
Region 14.1	T3PKS	1	35,689

No secondary metabolite regions were found in these records:: gnlProkkaPGPBBNNF_1 (original name was: gnl|Prokka|PGPBBNNF_1); gnlProkkaPGPBBNNF_2 (original name was: gnl|Prokka|PGPBBNNF_2); gnlProkkaPGPBBNNF_3 (original name was: gnl|Prokka|PGPBBNNF_3); gnlProkkaPGPBBNNF_4 (original name was: gnl|Prokka|PGPBBNNF_4); gnlProkkaPGPBBNNF_5 (original name was: gnl|Prokka|PGPBBNNF_5); gnlProkkaPGPBBNNF_6 (original name was: gnl|Prokka|PGPBBNNF_6); gnlProkkaPGPBBNNF_7 (original name was: gnl|Prokka|PGPBBNNF_7); gnlProkkaPGPBBNNF_8 (original name was: gnl|Prokka|PGPBBNNF_8); gnlProkkaPGPBBNNF_10 (original name was: gnl|Prokka|PGPBBNNF_10); gnlProkkaPGPBBNNF_12 (original name was: gnl|Prokka|PGPBBNNF_12); gnlProkkaPGPBBNNF_15 (original name was: gnl|Prokka|PGPBBNNF_15); gnlProkkaPGPBBNNF_16 (original name was: gnl|Prokka|PGPBBNNF_16)

Compact view

gnlProkkaPGPBBNNF_9 - Region 1 - RiPP-like

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Location: 109,036 - 121,186 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPGPBBNNF_11 - Region 1 - terpene

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Location: 26,248 - 47,129 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPGPBBNNF_13 - Region 1 - cyclic-lactone-autoinducer

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Location: 9,763 - 30,468 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPGPBBNNF_14 - Region 1 - T3PKS

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Location: 1 - 35,689 nt. (total: 35,689 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.