GCA_030464545.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaNEHPDDFL_1 (original name was: gnl|Prokka|NEHPDDFL_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	cyclic-lactone-autoinducer	215,987	236,692

gnlProkkaNEHPDDFL_2 (original name was: gnl|Prokka|NEHPDDFL_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	terpene	84,731	97,066

gnlProkkaNEHPDDFL_12 (original name was: gnl|Prokka|NEHPDDFL_12)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	T3PKS	167,868	209,037

gnlProkkaNEHPDDFL_34 (original name was: gnl|Prokka|NEHPDDFL_34)

Region	Type	From	To	Most similar known cluster		Similarity
Region 30.1	RiPP-like	20,300	32,450

Region	Type	From	To	Similarity
Region 1.1	cyclic-lactone-autoinducer	215,987	236,692
Region 2.1	terpene	84,731	97,066
Region 12.1	T3PKS	167,868	209,037
Region 30.1	RiPP-like	20,300	32,450

No secondary metabolite regions were found in these records:: gnlProkkaNEHPDDFL_3 (original name was: gnl|Prokka|NEHPDDFL_3); gnlProkkaNEHPDDFL_4 (original name was: gnl|Prokka|NEHPDDFL_4); gnlProkkaNEHPDDFL_5 (original name was: gnl|Prokka|NEHPDDFL_5); gnlProkkaNEHPDDFL_6 (original name was: gnl|Prokka|NEHPDDFL_6); gnlProkkaNEHPDDFL_7 (original name was: gnl|Prokka|NEHPDDFL_7); gnlProkkaNEHPDDFL_8 (original name was: gnl|Prokka|NEHPDDFL_8); gnlProkkaNEHPDDFL_9 (original name was: gnl|Prokka|NEHPDDFL_9); gnlProkkaNEHPDDFL_10 (original name was: gnl|Prokka|NEHPDDFL_10); gnlProkkaNEHPDDFL_11 (original name was: gnl|Prokka|NEHPDDFL_11); gnlProkkaNEHPDDFL_13 (original name was: gnl|Prokka|NEHPDDFL_13); gnlProkkaNEHPDDFL_14 (original name was: gnl|Prokka|NEHPDDFL_14); gnlProkkaNEHPDDFL_15 (original name was: gnl|Prokka|NEHPDDFL_15); gnlProkkaNEHPDDFL_16 (original name was: gnl|Prokka|NEHPDDFL_16); gnlProkkaNEHPDDFL_17 (original name was: gnl|Prokka|NEHPDDFL_17); gnlProkkaNEHPDDFL_18 (original name was: gnl|Prokka|NEHPDDFL_18); gnlProkkaNEHPDDFL_19 (original name was: gnl|Prokka|NEHPDDFL_19); gnlProkkaNEHPDDFL_20 (original name was: gnl|Prokka|NEHPDDFL_20); gnlProkkaNEHPDDFL_21 (original name was: gnl|Prokka|NEHPDDFL_21); gnlProkkaNEHPDDFL_22 (original name was: gnl|Prokka|NEHPDDFL_22); gnlProkkaNEHPDDFL_23 (original name was: gnl|Prokka|NEHPDDFL_23); gnlProkkaNEHPDDFL_24 (original name was: gnl|Prokka|NEHPDDFL_24); gnlProkkaNEHPDDFL_25 (original name was: gnl|Prokka|NEHPDDFL_25); gnlProkkaNEHPDDFL_30 (original name was: gnl|Prokka|NEHPDDFL_30); gnlProkkaNEHPDDFL_31 (original name was: gnl|Prokka|NEHPDDFL_31); gnlProkkaNEHPDDFL_32 (original name was: gnl|Prokka|NEHPDDFL_32); gnlProkkaNEHPDDFL_33 (original name was: gnl|Prokka|NEHPDDFL_33); gnlProkkaNEHPDDFL_35 (original name was: gnl|Prokka|NEHPDDFL_35)

Compact view

gnlProkkaNEHPDDFL_1 - Region 1 - cyclic-lactone-autoinducer

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Location: 215,987 - 236,692 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNEHPDDFL_2 - Region 1 - terpene

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Location: 84,731 - 97,066 nt. (total: 12,336 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNEHPDDFL_12 - Region 1 - T3PKS

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Location: 167,868 - 209,037 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNEHPDDFL_34 - Region 1 - RiPP-like

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Location: 20,300 - 32,450 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.