GCA_030504815.1 - 6 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaJINGBCCN_23 (original name was: gnl|Prokka|JINGBCCN_23)

Region	Type	From	To	Most similar known cluster		Similarity
Region 6.1	terpene	29,899	50,780

gnlProkkaJINGBCCN_27 (original name was: gnl|Prokka|JINGBCCN_27)

Region	Type	From	To	Most similar known cluster		Similarity
Region 10.1	lanthipeptide-class-iii	1	20,095

gnlProkkaJINGBCCN_28 (original name was: gnl|Prokka|JINGBCCN_28)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	RiPP-like	1	10,457
Region 11.2	cyclic-lactone-autoinducer	395,495	416,200

gnlProkkaJINGBCCN_48 (original name was: gnl|Prokka|JINGBCCN_48)

Region	Type	From	To	Most similar known cluster		Similarity
Region 31.1	RiPP-like	1	10,382

gnlProkkaJINGBCCN_61 (original name was: gnl|Prokka|JINGBCCN_61)

Region	Type	From	To	Most similar known cluster		Similarity
Region 44.1	T3PKS	1	28,584

Region	Type	From	To	Similarity
Region 6.1	terpene	29,899	50,780
Region 10.1	lanthipeptide-class-iii	1	20,095
Region 11.1	RiPP-like	1	10,457
Region 11.2	cyclic-lactone-autoinducer	395,495	416,200
Region 31.1	RiPP-like	1	10,382
Region 44.1	T3PKS	1	28,584

No secondary metabolite regions were found in these records:: gnlProkkaJINGBCCN_11 (original name was: gnl|Prokka|JINGBCCN_11); gnlProkkaJINGBCCN_19 (original name was: gnl|Prokka|JINGBCCN_19); gnlProkkaJINGBCCN_20 (original name was: gnl|Prokka|JINGBCCN_20); gnlProkkaJINGBCCN_21 (original name was: gnl|Prokka|JINGBCCN_21); gnlProkkaJINGBCCN_22 (original name was: gnl|Prokka|JINGBCCN_22); gnlProkkaJINGBCCN_24 (original name was: gnl|Prokka|JINGBCCN_24); gnlProkkaJINGBCCN_25 (original name was: gnl|Prokka|JINGBCCN_25); gnlProkkaJINGBCCN_26 (original name was: gnl|Prokka|JINGBCCN_26); gnlProkkaJINGBCCN_29 (original name was: gnl|Prokka|JINGBCCN_29); gnlProkkaJINGBCCN_30 (original name was: gnl|Prokka|JINGBCCN_30); gnlProkkaJINGBCCN_31 (original name was: gnl|Prokka|JINGBCCN_31); gnlProkkaJINGBCCN_32 (original name was: gnl|Prokka|JINGBCCN_32); gnlProkkaJINGBCCN_33 (original name was: gnl|Prokka|JINGBCCN_33); gnlProkkaJINGBCCN_34 (original name was: gnl|Prokka|JINGBCCN_34); gnlProkkaJINGBCCN_35 (original name was: gnl|Prokka|JINGBCCN_35); gnlProkkaJINGBCCN_36 (original name was: gnl|Prokka|JINGBCCN_36); gnlProkkaJINGBCCN_37 (original name was: gnl|Prokka|JINGBCCN_37); gnlProkkaJINGBCCN_38 (original name was: gnl|Prokka|JINGBCCN_38); gnlProkkaJINGBCCN_39 (original name was: gnl|Prokka|JINGBCCN_39); gnlProkkaJINGBCCN_40 (original name was: gnl|Prokka|JINGBCCN_40); gnlProkkaJINGBCCN_41 (original name was: gnl|Prokka|JINGBCCN_41); gnlProkkaJINGBCCN_42 (original name was: gnl|Prokka|JINGBCCN_42); gnlProkkaJINGBCCN_43 (original name was: gnl|Prokka|JINGBCCN_43); gnlProkkaJINGBCCN_44 (original name was: gnl|Prokka|JINGBCCN_44); gnlProkkaJINGBCCN_45 (original name was: gnl|Prokka|JINGBCCN_45); gnlProkkaJINGBCCN_46 (original name was: gnl|Prokka|JINGBCCN_46); gnlProkkaJINGBCCN_47 (original name was: gnl|Prokka|JINGBCCN_47); gnlProkkaJINGBCCN_49 (original name was: gnl|Prokka|JINGBCCN_49); gnlProkkaJINGBCCN_50 (original name was: gnl|Prokka|JINGBCCN_50); gnlProkkaJINGBCCN_51 (original name was: gnl|Prokka|JINGBCCN_51); gnlProkkaJINGBCCN_52 (original name was: gnl|Prokka|JINGBCCN_52); gnlProkkaJINGBCCN_53 (original name was: gnl|Prokka|JINGBCCN_53); gnlProkkaJINGBCCN_54 (original name was: gnl|Prokka|JINGBCCN_54); gnlProkkaJINGBCCN_55 (original name was: gnl|Prokka|JINGBCCN_55); gnlProkkaJINGBCCN_56 (original name was: gnl|Prokka|JINGBCCN_56); gnlProkkaJINGBCCN_57 (original name was: gnl|Prokka|JINGBCCN_57); gnlProkkaJINGBCCN_58 (original name was: gnl|Prokka|JINGBCCN_58); gnlProkkaJINGBCCN_59 (original name was: gnl|Prokka|JINGBCCN_59); gnlProkkaJINGBCCN_60 (original name was: gnl|Prokka|JINGBCCN_60); gnlProkkaJINGBCCN_62 (original name was: gnl|Prokka|JINGBCCN_62); gnlProkkaJINGBCCN_63 (original name was: gnl|Prokka|JINGBCCN_63); gnlProkkaJINGBCCN_64 (original name was: gnl|Prokka|JINGBCCN_64); gnlProkkaJINGBCCN_65 (original name was: gnl|Prokka|JINGBCCN_65); gnlProkkaJINGBCCN_66 (original name was: gnl|Prokka|JINGBCCN_66); gnlProkkaJINGBCCN_67 (original name was: gnl|Prokka|JINGBCCN_67); gnlProkkaJINGBCCN_68 (original name was: gnl|Prokka|JINGBCCN_68); gnlProkkaJINGBCCN_69 (original name was: gnl|Prokka|JINGBCCN_69); gnlProkkaJINGBCCN_70 (original name was: gnl|Prokka|JINGBCCN_70); gnlProkkaJINGBCCN_71 (original name was: gnl|Prokka|JINGBCCN_71); gnlProkkaJINGBCCN_72 (original name was: gnl|Prokka|JINGBCCN_72); gnlProkkaJINGBCCN_73 (original name was: gnl|Prokka|JINGBCCN_73); gnlProkkaJINGBCCN_74 (original name was: gnl|Prokka|JINGBCCN_74); gnlProkkaJINGBCCN_75 (original name was: gnl|Prokka|JINGBCCN_75); gnlProkkaJINGBCCN_76 (original name was: gnl|Prokka|JINGBCCN_76); gnlProkkaJINGBCCN_77 (original name was: gnl|Prokka|JINGBCCN_77); gnlProkkaJINGBCCN_78 (original name was: gnl|Prokka|JINGBCCN_78); gnlProkkaJINGBCCN_79 (original name was: gnl|Prokka|JINGBCCN_79); gnlProkkaJINGBCCN_80 (original name was: gnl|Prokka|JINGBCCN_80); gnlProkkaJINGBCCN_81 (original name was: gnl|Prokka|JINGBCCN_81); gnlProkkaJINGBCCN_82 (original name was: gnl|Prokka|JINGBCCN_82); gnlProkkaJINGBCCN_83 (original name was: gnl|Prokka|JINGBCCN_83); gnlProkkaJINGBCCN_84 (original name was: gnl|Prokka|JINGBCCN_84); gnlProkkaJINGBCCN_85 (original name was: gnl|Prokka|JINGBCCN_85); gnlProkkaJINGBCCN_86 (original name was: gnl|Prokka|JINGBCCN_86); gnlProkkaJINGBCCN_87 (original name was: gnl|Prokka|JINGBCCN_87); gnlProkkaJINGBCCN_88 (original name was: gnl|Prokka|JINGBCCN_88); gnlProkkaJINGBCCN_89 (original name was: gnl|Prokka|JINGBCCN_89); gnlProkkaJINGBCCN_90 (original name was: gnl|Prokka|JINGBCCN_90); gnlProkkaJINGBCCN_91 (original name was: gnl|Prokka|JINGBCCN_91); gnlProkkaJINGBCCN_94 (original name was: gnl|Prokka|JINGBCCN_94); gnlProkkaJINGBCCN_105 (original name was: gnl|Prokka|JINGBCCN_105); gnlProkkaJINGBCCN_116 (original name was: gnl|Prokka|JINGBCCN_116)

Compact view

gnlProkkaJINGBCCN_23 - Region 1 - terpene

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Location: 29,899 - 50,780 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJINGBCCN_27 - Region 1 - lanthipeptide-class-iii

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Location: 1 - 20,095 nt. (total: 20,095 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-iii: (micKC and not PKS_KS)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.

gnlProkkaJINGBCCN_28 - Region 1 - RiPP-like

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Location: 1 - 10,457 nt. (total: 10,457 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJINGBCCN_28 - Region 2 - cyclic-lactone-autoinducer

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Location: 395,495 - 416,200 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJINGBCCN_48 - Region 1 - RiPP-like

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Location: 1 - 10,382 nt. (total: 10,382 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJINGBCCN_61 - Region 1 - T3PKS

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Location: 1 - 28,584 nt. (total: 28,584 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.