GCA_030929905.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaIBFGDDND_2 (original name was: gnl|Prokka|IBFGDDND_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	RiPP-like	1,290	11,475

gnlProkkaIBFGDDND_4 (original name was: gnl|Prokka|IBFGDDND_4)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	RiPP-like	81,132	87,783

gnlProkkaIBFGDDND_11 (original name was: gnl|Prokka|IBFGDDND_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	T3PKS	35,319	76,491

Region	Type	From	To	Similarity
Region 2.1	RiPP-like	1,290	11,475
Region 4.1	RiPP-like	81,132	87,783
Region 11.1	T3PKS	35,319	76,491

No secondary metabolite regions were found in these records:: gnlProkkaIBFGDDND_1 (original name was: gnl|Prokka|IBFGDDND_1); gnlProkkaIBFGDDND_3 (original name was: gnl|Prokka|IBFGDDND_3); gnlProkkaIBFGDDND_5 (original name was: gnl|Prokka|IBFGDDND_5); gnlProkkaIBFGDDND_6 (original name was: gnl|Prokka|IBFGDDND_6); gnlProkkaIBFGDDND_7 (original name was: gnl|Prokka|IBFGDDND_7); gnlProkkaIBFGDDND_8 (original name was: gnl|Prokka|IBFGDDND_8); gnlProkkaIBFGDDND_9 (original name was: gnl|Prokka|IBFGDDND_9); gnlProkkaIBFGDDND_10 (original name was: gnl|Prokka|IBFGDDND_10); gnlProkkaIBFGDDND_12 (original name was: gnl|Prokka|IBFGDDND_12); gnlProkkaIBFGDDND_13 (original name was: gnl|Prokka|IBFGDDND_13); gnlProkkaIBFGDDND_14 (original name was: gnl|Prokka|IBFGDDND_14); gnlProkkaIBFGDDND_15 (original name was: gnl|Prokka|IBFGDDND_15); gnlProkkaIBFGDDND_16 (original name was: gnl|Prokka|IBFGDDND_16); gnlProkkaIBFGDDND_17 (original name was: gnl|Prokka|IBFGDDND_17); gnlProkkaIBFGDDND_18 (original name was: gnl|Prokka|IBFGDDND_18); gnlProkkaIBFGDDND_19 (original name was: gnl|Prokka|IBFGDDND_19); gnlProkkaIBFGDDND_20 (original name was: gnl|Prokka|IBFGDDND_20); gnlProkkaIBFGDDND_21 (original name was: gnl|Prokka|IBFGDDND_21); gnlProkkaIBFGDDND_22 (original name was: gnl|Prokka|IBFGDDND_22); gnlProkkaIBFGDDND_23 (original name was: gnl|Prokka|IBFGDDND_23); gnlProkkaIBFGDDND_24 (original name was: gnl|Prokka|IBFGDDND_24); gnlProkkaIBFGDDND_29 (original name was: gnl|Prokka|IBFGDDND_29); gnlProkkaIBFGDDND_30 (original name was: gnl|Prokka|IBFGDDND_30); gnlProkkaIBFGDDND_31 (original name was: gnl|Prokka|IBFGDDND_31); gnlProkkaIBFGDDND_32 (original name was: gnl|Prokka|IBFGDDND_32); gnlProkkaIBFGDDND_33 (original name was: gnl|Prokka|IBFGDDND_33); gnlProkkaIBFGDDND_34 (original name was: gnl|Prokka|IBFGDDND_34); gnlProkkaIBFGDDND_35 (original name was: gnl|Prokka|IBFGDDND_35)

Compact view

gnlProkkaIBFGDDND_2 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 1,290 - 11,475 nt. (total: 10,186 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaIBFGDDND_4 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 81,132 - 87,783 nt. (total: 6,652 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaIBFGDDND_11 - Region 1 - T3PKS

Download region GenBank file

Download region SVG

Location: 35,319 - 76,491 nt. (total: 41,173 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.