Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_001639595.1	Lactiplantibacillus plantarum	Nizo2263	SAMN04525976	2013-01-01	-	-	0	0	0	2	2.00
2	GCA_031877725.1	Lactiplantibacillus plantarum	SYBC-SM3	SAMN35789079	2022-09-15	China: The east mountain location, Suzhou	-	0	0	0	1	1.00
3	GCA_001672035.1	Lactiplantibacillus plantarum	NCU116	SAMN05162259	2000-02	China: Nanchang	-	97	0	0	1	1.00
4	GCA_002173655.1	Lactiplantibacillus plantarum	SRCM102022	SAMN07125944	2017-01-09	South Korea	-	108	0	0	1	1.00
5	GCA_023108905.1	Lactiplantibacillus plantarum	M4L1	SAMN26138624	2021-06-01	China:Qingdao	-	576	0	0	2	2.00
6	GCA_030464565.1	Lactiplantibacillus plantarum	VJLHD12L4	SAMN12027231	-	China	-	591	0	0	2	2.00
7	GCA_034422915.1	Lactiplantibacillus plantarum	YW2189	SAMN38636266	2022	Taiwan	Homo sapiens	594	0	0	1	1.00
8	GCA_034478365.1	Lactiplantibacillus plantarum	S034-52w-2	SAMN38650131	2022	Taiwan	Homo sapiens	597	0	0	1	1.00
9	GCA_037966755.1	Lactiplantibacillus plantarum	ATA-LTC-Lp230198	SAMN40643420	1998-01-23	Turkey:Manisa	-	601	0	0	2	2.00
10	GCA_017963505.1	Lactiplantibacillus plantarum	XSBN-3	SAMN18607044	2020-12-05	China	-	606	0	2	2	2.83
11	GCA_049188355.1	Lactiplantibacillus plantarum	CQ01-107	SAMN46797118	2016-12	China:chongqing	-	608	0	0	1	1.00
12	GCA_002024845.1	Lactiplantibacillus plantarum	CLP0611	SAMN06240352	1900-01-01	-	-	614	0	0	1	1.00
13	GCA_002914965.1	Lactiplantibacillus plantarum	BP06	SAMN07187784	2017	Italy	-	614	0	0	2	2.00
14	GCA_003023825.1	Lactiplantibacillus plantarum	JDARSH	SAMN08741665	2016	India: Kolhapur	-	614	0	0	2	2.00
15	GCA_003053035.1	Lactiplantibacillus plantarum	DS18_9	SAMN06464105	2016-10-14	USA:MD	Homo sapiens	614	0	0	2	2.00
16	GCA_003053045.1	Lactiplantibacillus plantarum	DS23_9	SAMN06464107	2016-12-16	USA:MD	Homo sapiens	614	0	0	2	2.00
17	GCA_003061725.1	Lactiplantibacillus plantarum	DS6_9	SAMN05726897	2016-02-05	USA:MD	Homo sapiens	614	0	0	2	2.00
18	GCA_003061765.1	Lactiplantibacillus plantarum	DS14_9	SAMN05726895	2016-03-06	USA:MD	Homo sapiens	614	0	0	2	2.00
19	GCA_003061785.1	Lactiplantibacillus plantarum	DS9_9	SAMN05726899	2016-02-05	USA:MD	Homo sapiens	614	0	0	2	2.00
20	GCA_003061805.1	Lactiplantibacillus plantarum	DS11_9	SAMN05726893	2015-12-12	USA:MD	Homo sapiens	614	0	0	2	2.00
21	GCA_003143915.1	Lactiplantibacillus plantarum	HAC01	SAMN09087848	2012	South Korea	-	614	0	0	1	1.00
22	GCA_003586485.1	Lactiplantibacillus plantarum	DR7	SAMN09721150	2016-09-01	Malaysia	Bos taurus	614	0	0	1	1.00
23	GCA_003597595.1	Lactiplantibacillus plantarum	ATG-K6	SAMN10094369	2016-01-12	South Korea	-	614	0	0	1	1.00
24	GCA_003597615.1	Lactiplantibacillus plantarum	ATG-K8	SAMN10094466	2016-01-14	South Korea	-	614	0	0	1	1.00
25	GCA_006364975.1	Lactiplantibacillus plantarum	NTTN08	SAMN11952115	2016-08-08	Viet Nam	Homo sapiens	614	0	0	2	2.00
26	GCA_013256965.1	Lactiplantibacillus plantarum subsp. plantarum	G1	SAMN14979736	2019-05-01	Brazil	-	614	0	0	1	1.00
27	GCA_021279005.2	Lactiplantibacillus plantarum	022AE	SAMN09662691	2017-01-02	India: Maharashtra	-	614	0	0	1	1.00
28	GCA_026183415.1	Lactiplantibacillus plantarum	BRD_L15	SAMN31580342	2022-08-12	South Korea:Kyungki	Canis lupus familiaris dachshund	614	0	0	1	1.00
29	GCA_026275505.1	Lactiplantibacillus plantarum	V1	SAMN31726903	2021	Israel	cow	614	0	0	1	1.00
30	GCA_028323145.1	Lactiplantibacillus plantarum	1001274st1_G7_1001274B_151102	SAMN31322645	2015-11-02	USA	Homo sapiens	614	0	0	2	2.00
31	GCA_028323205.1	Lactiplantibacillus plantarum	1001274st1_B5_1001274B_151102	SAMN31322644	2015-11-02	USA	Homo sapiens	614	0	0	2	2.00
32	GCA_040785225.1	Lactiplantibacillus plantarum	gbc_C	SAMN41082098	2021	USA: Glendale, Arizona	-	614	0	0	2	2.00
33	GCA_040790905.1	Lactiplantibacillus plantarum	AUSA004	SAMN41916868	2023-11-20	China:Longgang District, Shenzhen City, Guangdong Province	-	614	0	0	1	1.00
34	GCA_040822595.1	Lactiplantibacillus plantarum	ATA-LPC98052	SAMN41784237	1997-01-12	Turkey: Usak, Evrendede, Cokragan	-	614	0	0	2	2.00
35	GCA_040883545.1	Lactiplantibacillus plantarum	AM-LP-81	SAMN42007028	-	-	-	614	0	0	2	2.00
36	GCA_042691645.1	Lactiplantibacillus plantarum	LP01	SAMN43919990	2022	Malta	-	614	0	0	1	1.00
37	GCA_045348195.1	Lactiplantibacillus plantarum	TCI999	SAMN40716503	2018-07-10	Taiwan: Taipei	-	614	0	0	1	1.00
38	GCA_045528025.1	Lactiplantibacillus plantarum	FAM 25263	SAMN43257761	2019-11	Switzerland	-	614	0	0	2	2.00
39	GCA_046109905.1	Lactiplantibacillus plantarum	TCI227	SAMN40890045	2018-08-16	Taiwan: Taipei	-	614	0	0	1	1.00
40	GCA_047495545.1	Lactiplantibacillus plantarum	OBM7	SAMN46400537	2024-09	China:Qinghai	-	614	0	0	1	1.00
41	GCA_048657025.1	Lactiplantibacillus plantarum	RAL-4	SAMN46169820	2024-04-15	China: Zhenjiang	-	614	0	0	2	2.00
42	GCA_004101625.1	Lactiplantibacillus plantarum	SRCM103418	SAMN10743382	2018	South Korea	-	615	0	0	1	1.00
43	GCA_025212155.1	Lactiplantibacillus plantarum	CIRM-BIA 2224	SAMN10365325	1978	France	-	615	0	0	2	2.00
44	GCA_040785175.1	Lactiplantibacillus plantarum	gbc_d	SAMN41082099	2021	USA: Glendale, Arizona	-	615	0	0	2	2.00
45	GCA_047649195.1	Lactiplantibacillus plantarum	V2	SAMN46400503	2024-09	China:Qinghai	-	615	0	0	1	1.00
46	GCA_004055415.1	Lactiplantibacillus plantarum	SRCM 103305	SAMN10738671	2018	South Korea	-	617	0	0	1	1.00
47	GCA_046843265.1	Lactiplantibacillus plantarum	KM119	SAMN46082864	2016-12-01	China:Kunming	-	619	0	0	1	1.00
48	GCA_001540965.1	Lactiplantibacillus plantarum	Lp1612	SAMN03702585	2012	France	bovine	622	0	0	2	2.00
49	GCA_022810685.1	Lactiplantibacillus plantarum	SCB0151	SAMN22106488	2017-08-01	China: Guangzhou	Kefir grain	623	0	0	1	1.00
50	GCA_044731905.1	Lactiplantibacillus plantarum	DSM 12028	SAMN41278858	-	Portugal: Beira Baixa	-	623	0	0	2	2.00
51	GCA_002117285.1	Lactiplantibacillus plantarum	TMW 1.708	SAMN05805046	-	Germany	-	624	0	0	1	1.00
52	GCA_004103495.1	Lactiplantibacillus plantarum	SRCM103472	SAMN10754018	2018	South Korea	-	624	0	0	1	1.00
53	GCA_025189965.1	Lactiplantibacillus plantarum	CIRM-BIA 653	SAMN10365483	1972	France	-	625	0	0	2	2.00
54	GCA_009756965.1	Lactiplantibacillus plantarum	BK-022	SAMN11655668	2016-06-30	South Korea: Pohang City	-	626	0	0	1	1.00
55	GCA_004103515.1	Lactiplantibacillus plantarum	SRCM103473	SAMN10754056	2018	South Korea	-	627	0	0	1	1.00
56	GCA_041344945.1	Lactiplantibacillus plantarum	MD159	SAMN43087929	2021-04-16	South Korea: Pyeongtaek	-	627	0	0	1	1.00
57	GCA_022558425.1	Lactiplantibacillus plantarum	ST	SAMN24424940	2016-07	China: Yunnan Province	-	628	1	0	1	1.41
58	GCA_034333585.1	Lactiplantibacillus plantarum	cqf-43	SAMN37720970	2021-12-01	China:Chongqing	sow feces	628	0	0	1	1.00
59	GCA_036321505.1	Lactiplantibacillus plantarum	CGMCC 14177	SAMN39555870	2017-03	China:Shanghai	-	628	0	0	1	1.00
60	GCA_017576965.1	Lactiplantibacillus plantarum	KLDS1.0386	SAMN18323758	2012-10	China:Inner Mongolia	-	629	0	0	1	1.00
61	GCA_020844665.1	Lactiplantibacillus plantarum	FUA3428	SAMN21235229	2013	Italy	-	629	0	0	2	2.00
62	GCA_020844685.1	Lactiplantibacillus plantarum	FUA3302	SAMN21227964	2009	Germany	-	629	0	0	2	2.00
63	GCA_026127685.1	Lactiplantibacillus plantarum	FUA3302	SAMN21845655	2009	-	-	629	0	0	2	2.00
64	GCA_026127775.1	Lactiplantibacillus plantarum	FUA3428	SAMN21845660	2013	-	-	629	0	0	2	2.00
65	GCA_001272315.2	Lactiplantibacillus plantarum subsp. plantarum	CGMCC 1.557	SAMN03976562	2014-12	China	-	630	0	0	1	1.00
66	GCA_017580935.1	Lactiplantibacillus plantarum	EL11	SAMN13735608	2009-12	USA: California	-	630	0	0	2	2.00
67	GCA_019599425.1	Lactiplantibacillus plantarum	JZ6	SAMN20526383	2021-02-23	China:Henan	-	630	0	0	2	2.00
68	GCA_024181685.1	Lactiplantibacillus plantarum	P9	SAMN15795378	2008	China:Inner Mongolia	-	630	0	0	1	1.00
69	GCA_021559675.1	Lactiplantibacillus plantarum	P9	SAMN15461261	2006-07-20	China:Nei Monggol Autonomous Region	-	631	0	0	1	1.00
70	GCA_001639485.1	Lactiplantibacillus plantarum	Nizo2029	SAMN04525416	2013-01-01	Italy	-	632	0	0	2	2.00
71	GCA_001720285.1	Lactiplantibacillus plantarum	JSA22	SAMN05520948	2015-01-05	South Korea	-	632	0	0	1	1.00
72	GCA_003990985.1	Lactiplantibacillus plantarum	Curd	SAMN10659804	2016-10-26	India:Sikkim	-	632	0	0	2	2.00
73	GCA_004118615.1	Lactiplantibacillus plantarum	dkp1	SAMN10791424	2017-11-26	India: Sikkim	-	632	0	0	2	2.00
74	GCA_009759845.1	Lactiplantibacillus plantarum	123-17	SAMN13526508	2017-05-12	Russia: Kislovodsk	-	632	0	0	1	1.00
75	GCA_030464485.1	Lactiplantibacillus plantarum	FCQNA32M4	SAMN12027236	-	China	Homo sapiens	632	0	0	2	2.00
76	GCA_049241955.1	Lactiplantibacillus plantarum	BLP3	SAMN47502531	2022-05-15	South Korea: Suwon	Food Crop	632	0	0	1	1.00
77	GCA_003966855.1	Lactiplantibacillus plantarum	-	SAMD00097254	-	-	-	633	0	0	1	1.00
78	GCA_009913695.1	Lactiplantibacillus plantarum	SRCM101105	SAMN08707600	2017-09-03	South Korea	-	634	0	0	1	1.00
79	GCA_044129425.1	Lactiplantibacillus plantarum	LVS14	SAMN37186726	2022	Egypt: Alexandria	-	634	0	0	2	2.00
80	GCA_004319665.1	Lactiplantibacillus plantarum	IRG1	SAMN08290306	2016-10-24	South Korea: Seoul	-	635	0	0	1	1.00
81	GCA_001633565.1	Lactiplantibacillus plantarum	Nizo2801	SAMN04528826	2013-01-01	Japan	-	636	0	0	2	2.00
82	GCA_009913975.1	Lactiplantibacillus plantarum	SRCM102737	SAMN08707612	2017-09-03	South Korea	-	636	0	0	1	1.00
83	GCA_026127625.1	Lactiplantibacillus plantarum	FUA3247	SAMN21845652	2008	-	-	636	0	0	2	2.00
84	GCA_026976315.1	Lactiplantibacillus plantarum	SRCM101587	SAMN31762478	2017-05	South Korea	-	636	0	0	1	1.00
85	GCA_030464405.1	Lactiplantibacillus plantarum	PCQZX1M2	SAMN12027239	-	China	-	636	0	0	2	2.00
86	GCA_030464575.1	Lactiplantibacillus plantarum	PCQYC1M1	SAMN12027230	-	China	-	636	0	0	2	2.00
87	GCA_030464605.1	Lactiplantibacillus plantarum	PCQYB1M3	SAMN12027229	-	China	-	636	0	0	2	2.00
88	GCA_030464625.1	Lactiplantibacillus plantarum	PCQWS1M2	SAMN12027228	-	China	-	636	0	0	2	2.00
89	GCA_030464645.1	Lactiplantibacillus plantarum	PCQLP6M2	SAMN12027227	-	China	-	636	0	0	2	2.00
90	GCA_030464665.1	Lactiplantibacillus plantarum	PCQKX1M2	SAMN12027226	-	China	-	636	0	0	2	2.00
91	GCA_030464685.1	Lactiplantibacillus plantarum	PCQDJ1M5	SAMN12027225	-	China	-	636	0	0	2	2.00
92	GCA_008868495.1	Lactiplantibacillus plantarum	BIO1096	SAMN12856541	-	-	-	637	0	0	2	2.00
93	GCA_009913675.1	Lactiplantibacillus plantarum	SRCM100995	SAMN08707599	2017-09-03	South Korea	-	637	0	0	1	1.00
94	GCA_031085385.1	Lactiplantibacillus plantarum	BRD3A	SAMN33981270	2019-03-12	India: Manipur	-	637	0	0	2	2.00
95	GCA_036321605.1	Lactiplantibacillus plantarum	CGMCC 15358	SAMN39564528	2017-03	China:Shanghai	Cornus officinalis	637	0	0	1	1.00
96	GCA_001880185.2	Lactiplantibacillus plantarum	MF1298	SAMN04251328	2004	Norway	-	638	0	0	1	1.00
97	GCA_030297695.1	Lactiplantibacillus plantarum	IYO2065	SAMD00599669	2020	Japan:Ehime	-	638	0	0	1	1.00
98	GCA_017351995.1	Lactiplantibacillus plantarum	AR195	SAMN18137751	2014-04-27	China:shanghai	-	639	0	0	1	1.00
99	GCA_030297715.1	Lactiplantibacillus plantarum	AWA2013	SAMD00599670	2020	Japan:Tokushima	-	639	0	0	0	0.00
100	GCA_043951895.1	Lactiplantibacillus plantarum	LP3-9	SAMN44321994	2022-10	China:Hubei	-	639	0	0	2	2.00