GCA_032918205.1 - 14 region(s)

Region	Type	From	To	Most similar known cluster	Similarity
Region 1	PKS-like	62,263	103,507	butirosin A/butirosin B	Saccharide	7%
Region 2	terpene	185,521	206,261
Region 3	lanthipeptide-class-ii	327,191	356,080
Region 4	transAT-PKS	519,677	607,883	macrolactin H	Polyketide	100%
Region 5	transAT-PKS,T3PKS,NRPS	828,756	938,876	bacillaene	Polyketide+NRP	100%
Region 6	NRPS,transAT-PKS,betalactone	994,097	1,115,721	fengycin	NRP	66%
Region 7	other	1,770,179	1,811,597	bacilysin	Other	100%
Region 8	NRPS,transAT-PKS	2,120,550	2,198,278	locillomycin/locillomycin B/locillomycin C	NRP+Polyketide	35%
Region 9	NRPS	2,268,351	2,333,758	surfactin	NRP:Lipopeptide	82%
Region 10	transAT-PKS-like	2,502,432	2,568,115	difficidin	Polyketide	53%
Region 11	T3PKS	2,683,659	2,724,759
Region 12	terpene	2,793,386	2,815,269
Region 13	RiPP-like,NRP-metallophore,NRPS	3,282,620	3,334,412	bacillibactin	NRP	100%
Region 14	transAT-PKS-like,NRPS	3,796,583	3,919,985	plipastatin	NRP	30%

gnlProkkaKPBDMEBA_1 - Region 1 - PKS-like

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Location: 62,263 - 103,507 nt. (total: 41,245 nt) Show pHMM detection rules used

PKS-like: (t2pks2 or ksIII)

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gnlProkkaKPBDMEBA_1 - Region 2 - terpene

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Location: 185,521 - 206,261 nt. (total: 20,741 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaKPBDMEBA_1 - Region 3 - lanthipeptide-class-ii

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Location: 327,191 - 356,080 nt. (total: 28,890 nt) Show pHMM detection rules used

lanthipeptide-class-ii: cds(LANC_like and DUF4135)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

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resistance

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gnlProkkaKPBDMEBA_1 - Region 4 - transAT-PKS

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Location: 519,677 - 607,883 nt. (total: 88,207 nt) Show pHMM detection rules used

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core biosynthetic genes

additional biosynthetic genes

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resistance

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gnlProkkaKPBDMEBA_1 - Region 5 - NRPS,T3PKS,transAT-PKS

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Location: 828,756 - 938,876 nt. (total: 110,121 nt) Show pHMM detection rules used

transAT-PKS: (cds(PKS_AT and not (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS)) and (cds(ATd and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS)) or cds(tra_KS and PP-binding)))
T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)
NRPS: cds(Condensation and (AMP-binding or A-OX))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

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resistance

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gnlProkkaKPBDMEBA_1 - Region 6 - NRPS,betalactone,transAT-PKS

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Location: 994,097 - 1,115,721 nt. (total: 121,625 nt) Show pHMM detection rules used

NRPS: cds(Condensation and (AMP-binding or A-OX))
transAT-PKS: (cds(PKS_AT and not (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS)) and (cds(ATd and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS)) or cds(tra_KS and PP-binding)))
betalactone: (HMGL-like and AMP-binding)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaKPBDMEBA_1 - Region 7 - other

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Location: 1,770,179 - 1,811,597 nt. (total: 41,419 nt) Show pHMM detection rules used

other: (LmbU or Neocarzinostat or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin or orf2_PTase)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaKPBDMEBA_1 - Region 8 - NRPS,transAT-PKS

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Location: 2,120,550 - 2,198,278 nt. (total: 77,729 nt) Show pHMM detection rules used

Legend:

core biosynthetic genes

additional biosynthetic genes

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resistance

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gnlProkkaKPBDMEBA_1 - Region 9 - NRPS

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Location: 2,268,351 - 2,333,758 nt. (total: 65,408 nt) Show pHMM detection rules used

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaKPBDMEBA_1 - Region 10 - transAT-PKS-like

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Location: 2,502,432 - 2,568,115 nt. (total: 65,684 nt) Show pHMM detection rules used

transAT-PKS-like: cds(ATd and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS) and not PKS_AT)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaKPBDMEBA_1 - Region 11 - T3PKS

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Location: 2,683,659 - 2,724,759 nt. (total: 41,101 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaKPBDMEBA_1 - Region 12 - terpene

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Location: 2,793,386 - 2,815,269 nt. (total: 21,884 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaKPBDMEBA_1 - Region 13 - NRP-metallophore,NRPS,RiPP-like

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Location: 3,282,620 - 3,334,412 nt. (total: 51,793 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))
NRP-metallophore: (VibH_like or Cy_tandem or (cds(Condensation and AMP-binding) and ((IBH_Asp and not SBH_Asp) or IBH_His or TBH_Asp or CyanoBH_Asp1 or CyanoBH_Asp2 or IPL or SalSyn or (EntA and EntC) or (GrbD and GrbE) or (FbnL and FbnM) or PvdO or PvdP or (Orn_monoox and not (KtzT or MetRS-like)) or Lys_monoox or VbsL)))
NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaKPBDMEBA_1 - Region 14 - NRPS,transAT-PKS-like

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Location: 3,796,583 - 3,919,985 nt. (total: 123,403 nt) Show pHMM detection rules used

transAT-PKS-like: cds(ATd and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS) and not PKS_AT)
NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Identified secondary metabolite regions using strictness 'relaxed'

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Lanthipeptide(s) for ctg1_354

MIBiG 3.1 matches for ctg1_353

antiSMASH-DB 4.0 matches for ctg1_353

MIBiG 3.1 matches for ctg1_356

antiSMASH-DB 4.0 matches for ctg1_356

MIBiG 3.1 matches for ctg1_357

antiSMASH-DB 4.0 matches for ctg1_357

Lanthipeptide(s) for ctg1_358

MIBiG 3.1 matches for ctg1_353

antiSMASH-DB 4.0 matches for ctg1_353

MIBiG 3.1 matches for ctg1_356

antiSMASH-DB 4.0 matches for ctg1_356

MIBiG 3.1 matches for ctg1_357

antiSMASH-DB 4.0 matches for ctg1_357

MIBiG 3.1 matches for ctg1_371

antiSMASH-DB 4.0 matches for ctg1_371

MIBiG 3.1 matches for allorf_0342512_0342694

antiSMASH-DB 4.0 matches for allorf_0342512_0342694

antiSMASH-DB 4.0 matches for allorf_0352896_0353093

antiSMASH-DB 4.0 matches for allorf_0355744_0355845

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