GCA_034086125.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaBMEMOCOC_2 (original name was: gnl|Prokka|BMEMOCOC_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	terpene	1	12,286

gnlProkkaBMEMOCOC_4 (original name was: gnl|Prokka|BMEMOCOC_4)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	T3PKS	119,764	160,933

gnlProkkaBMEMOCOC_12 (original name was: gnl|Prokka|BMEMOCOC_12)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	RiPP-like	106,880	119,030

gnlProkkaBMEMOCOC_14 (original name was: gnl|Prokka|BMEMOCOC_14)

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	cyclic-lactone-autoinducer	58,131	78,836

Region	Type	From	To	Similarity
Region 2.1	terpene	1	12,286
Region 4.1	T3PKS	119,764	160,933
Region 12.1	RiPP-like	106,880	119,030
Region 14.1	cyclic-lactone-autoinducer	58,131	78,836

No secondary metabolite regions were found in these records:: gnlProkkaBMEMOCOC_1 (original name was: gnl|Prokka|BMEMOCOC_1); gnlProkkaBMEMOCOC_3 (original name was: gnl|Prokka|BMEMOCOC_3); gnlProkkaBMEMOCOC_5 (original name was: gnl|Prokka|BMEMOCOC_5); gnlProkkaBMEMOCOC_6 (original name was: gnl|Prokka|BMEMOCOC_6); gnlProkkaBMEMOCOC_7 (original name was: gnl|Prokka|BMEMOCOC_7); gnlProkkaBMEMOCOC_8 (original name was: gnl|Prokka|BMEMOCOC_8); gnlProkkaBMEMOCOC_9 (original name was: gnl|Prokka|BMEMOCOC_9); gnlProkkaBMEMOCOC_10 (original name was: gnl|Prokka|BMEMOCOC_10); gnlProkkaBMEMOCOC_11 (original name was: gnl|Prokka|BMEMOCOC_11); gnlProkkaBMEMOCOC_13 (original name was: gnl|Prokka|BMEMOCOC_13); gnlProkkaBMEMOCOC_15 (original name was: gnl|Prokka|BMEMOCOC_15); gnlProkkaBMEMOCOC_16 (original name was: gnl|Prokka|BMEMOCOC_16); gnlProkkaBMEMOCOC_17 (original name was: gnl|Prokka|BMEMOCOC_17); gnlProkkaBMEMOCOC_18 (original name was: gnl|Prokka|BMEMOCOC_18); gnlProkkaBMEMOCOC_19 (original name was: gnl|Prokka|BMEMOCOC_19); gnlProkkaBMEMOCOC_20 (original name was: gnl|Prokka|BMEMOCOC_20); gnlProkkaBMEMOCOC_21 (original name was: gnl|Prokka|BMEMOCOC_21); gnlProkkaBMEMOCOC_22 (original name was: gnl|Prokka|BMEMOCOC_22); gnlProkkaBMEMOCOC_23 (original name was: gnl|Prokka|BMEMOCOC_23); gnlProkkaBMEMOCOC_24 (original name was: gnl|Prokka|BMEMOCOC_24); gnlProkkaBMEMOCOC_25 (original name was: gnl|Prokka|BMEMOCOC_25); gnlProkkaBMEMOCOC_26 (original name was: gnl|Prokka|BMEMOCOC_26); gnlProkkaBMEMOCOC_27 (original name was: gnl|Prokka|BMEMOCOC_27); gnlProkkaBMEMOCOC_28 (original name was: gnl|Prokka|BMEMOCOC_28); gnlProkkaBMEMOCOC_29 (original name was: gnl|Prokka|BMEMOCOC_29); gnlProkkaBMEMOCOC_30 (original name was: gnl|Prokka|BMEMOCOC_30); gnlProkkaBMEMOCOC_31 (original name was: gnl|Prokka|BMEMOCOC_31); gnlProkkaBMEMOCOC_32 (original name was: gnl|Prokka|BMEMOCOC_32); gnlProkkaBMEMOCOC_33 (original name was: gnl|Prokka|BMEMOCOC_33); gnlProkkaBMEMOCOC_34 (original name was: gnl|Prokka|BMEMOCOC_34); gnlProkkaBMEMOCOC_35 (original name was: gnl|Prokka|BMEMOCOC_35); gnlProkkaBMEMOCOC_36 (original name was: gnl|Prokka|BMEMOCOC_36)

Compact view

gnlProkkaBMEMOCOC_2 - Region 1 - terpene

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Location: 1 - 12,286 nt. (total: 12,286 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaBMEMOCOC_4 - Region 1 - T3PKS

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Location: 119,764 - 160,933 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaBMEMOCOC_12 - Region 1 - RiPP-like

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Location: 106,880 - 119,030 nt. (total: 12,151 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaBMEMOCOC_14 - Region 1 - cyclic-lactone-autoinducer

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Location: 58,131 - 78,836 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.