GCA_034121055.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaCAADCJHL_28 (original name was: gnl|Prokka|CAADCJHL_28)

Region	Type	From	To	Most similar known cluster		Similarity
Region 28.1	RRE-containing	47,335	59,856

gnlProkkaCAADCJHL_34 (original name was: gnl|Prokka|CAADCJHL_34)

Region	Type	From	To	Most similar known cluster		Similarity
Region 34.1	RiPP-like	1	10,026

gnlProkkaCAADCJHL_48 (original name was: gnl|Prokka|CAADCJHL_48)

Region	Type	From	To	Most similar known cluster		Similarity
Region 48.1	arylpolyene	119,754	167,358	flexirubin	Other	48%

Region	Type	From	To	Most similar known cluster	Similarity
Region 28.1	RRE-containing	47,335	59,856
Region 34.1	RiPP-like	1	10,026
Region 48.1	arylpolyene	119,754	167,358	flexirubin	Other	48%

No secondary metabolite regions were found in these records:: gnlProkkaCAADCJHL_1 (original name was: gnl|Prokka|CAADCJHL_1); gnlProkkaCAADCJHL_2 (original name was: gnl|Prokka|CAADCJHL_2); gnlProkkaCAADCJHL_3 (original name was: gnl|Prokka|CAADCJHL_3); gnlProkkaCAADCJHL_4 (original name was: gnl|Prokka|CAADCJHL_4); gnlProkkaCAADCJHL_5 (original name was: gnl|Prokka|CAADCJHL_5); gnlProkkaCAADCJHL_6 (original name was: gnl|Prokka|CAADCJHL_6); gnlProkkaCAADCJHL_7 (original name was: gnl|Prokka|CAADCJHL_7); gnlProkkaCAADCJHL_8 (original name was: gnl|Prokka|CAADCJHL_8); gnlProkkaCAADCJHL_9 (original name was: gnl|Prokka|CAADCJHL_9); gnlProkkaCAADCJHL_10 (original name was: gnl|Prokka|CAADCJHL_10); gnlProkkaCAADCJHL_11 (original name was: gnl|Prokka|CAADCJHL_11); gnlProkkaCAADCJHL_12 (original name was: gnl|Prokka|CAADCJHL_12); gnlProkkaCAADCJHL_13 (original name was: gnl|Prokka|CAADCJHL_13); gnlProkkaCAADCJHL_14 (original name was: gnl|Prokka|CAADCJHL_14); gnlProkkaCAADCJHL_15 (original name was: gnl|Prokka|CAADCJHL_15); gnlProkkaCAADCJHL_16 (original name was: gnl|Prokka|CAADCJHL_16); gnlProkkaCAADCJHL_17 (original name was: gnl|Prokka|CAADCJHL_17); gnlProkkaCAADCJHL_18 (original name was: gnl|Prokka|CAADCJHL_18); gnlProkkaCAADCJHL_19 (original name was: gnl|Prokka|CAADCJHL_19); gnlProkkaCAADCJHL_20 (original name was: gnl|Prokka|CAADCJHL_20); gnlProkkaCAADCJHL_21 (original name was: gnl|Prokka|CAADCJHL_21); gnlProkkaCAADCJHL_22 (original name was: gnl|Prokka|CAADCJHL_22); gnlProkkaCAADCJHL_23 (original name was: gnl|Prokka|CAADCJHL_23); gnlProkkaCAADCJHL_24 (original name was: gnl|Prokka|CAADCJHL_24); gnlProkkaCAADCJHL_25 (original name was: gnl|Prokka|CAADCJHL_25); gnlProkkaCAADCJHL_26 (original name was: gnl|Prokka|CAADCJHL_26); gnlProkkaCAADCJHL_27 (original name was: gnl|Prokka|CAADCJHL_27); gnlProkkaCAADCJHL_29 (original name was: gnl|Prokka|CAADCJHL_29); gnlProkkaCAADCJHL_30 (original name was: gnl|Prokka|CAADCJHL_30); gnlProkkaCAADCJHL_31 (original name was: gnl|Prokka|CAADCJHL_31); gnlProkkaCAADCJHL_32 (original name was: gnl|Prokka|CAADCJHL_32); gnlProkkaCAADCJHL_33 (original name was: gnl|Prokka|CAADCJHL_33); gnlProkkaCAADCJHL_35 (original name was: gnl|Prokka|CAADCJHL_35); gnlProkkaCAADCJHL_36 (original name was: gnl|Prokka|CAADCJHL_36); gnlProkkaCAADCJHL_37 (original name was: gnl|Prokka|CAADCJHL_37); gnlProkkaCAADCJHL_38 (original name was: gnl|Prokka|CAADCJHL_38); gnlProkkaCAADCJHL_39 (original name was: gnl|Prokka|CAADCJHL_39); gnlProkkaCAADCJHL_40 (original name was: gnl|Prokka|CAADCJHL_40); gnlProkkaCAADCJHL_41 (original name was: gnl|Prokka|CAADCJHL_41); gnlProkkaCAADCJHL_42 (original name was: gnl|Prokka|CAADCJHL_42); gnlProkkaCAADCJHL_43 (original name was: gnl|Prokka|CAADCJHL_43); gnlProkkaCAADCJHL_44 (original name was: gnl|Prokka|CAADCJHL_44); gnlProkkaCAADCJHL_45 (original name was: gnl|Prokka|CAADCJHL_45); gnlProkkaCAADCJHL_46 (original name was: gnl|Prokka|CAADCJHL_46); gnlProkkaCAADCJHL_47 (original name was: gnl|Prokka|CAADCJHL_47); gnlProkkaCAADCJHL_49 (original name was: gnl|Prokka|CAADCJHL_49); gnlProkkaCAADCJHL_50 (original name was: gnl|Prokka|CAADCJHL_50); gnlProkkaCAADCJHL_51 (original name was: gnl|Prokka|CAADCJHL_51); gnlProkkaCAADCJHL_52 (original name was: gnl|Prokka|CAADCJHL_52); gnlProkkaCAADCJHL_53 (original name was: gnl|Prokka|CAADCJHL_53); gnlProkkaCAADCJHL_54 (original name was: gnl|Prokka|CAADCJHL_54); gnlProkkaCAADCJHL_55 (original name was: gnl|Prokka|CAADCJHL_55); gnlProkkaCAADCJHL_56 (original name was: gnl|Prokka|CAADCJHL_56); gnlProkkaCAADCJHL_57 (original name was: gnl|Prokka|CAADCJHL_57); gnlProkkaCAADCJHL_58 (original name was: gnl|Prokka|CAADCJHL_58); gnlProkkaCAADCJHL_59 (original name was: gnl|Prokka|CAADCJHL_59)

Compact view

gnlProkkaCAADCJHL_28 - Region 1 - RRE-containing

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Location: 47,335 - 59,856 nt. (total: 12,522 nt) Show pHMM detection rules used

Region on contig edge.

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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resistance

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaCAADCJHL_34 - Region 1 - RiPP-like

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Location: 1 - 10,026 nt. (total: 10,026 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaCAADCJHL_48 - Region 1 - arylpolyene

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Location: 119,754 - 167,358 nt. (total: 47,605 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

NRPS/PKS substrates

NRPS/PKS substrate predictions

ctg48_104

AMP-binding (18..335): X

nrpys: Asp, Asn, Glu, Gln, Aad

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: YMRMIITSSK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)