Select genomic region:
Overview
20.1
25.1
25.2
64.1
81.1
110.1

### Identified primary metabolite regions

c00020_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_20)

Region | Type | Class | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | --- | ---
Region 20.1 | NADH_dehydrogenase_I | E-MGC | 54,747 | 84,938 | NADH dehydrogenase I Bacteroides sp. | NADHD | 66%

c00025_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_25)

Region | Type | Class | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | --- | ---
Region 25.1 | Pyruvate2acetate-formate | SCFA | 1 | 13,087 | Pyruvate to acetate-formate B. thetaiotaomicron | PFL_acetate | 100%
Region 25.2 | TPP_fatty_acids | Putative | 31,168 | 56,024 |

c00064_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_64)

Region | Type | Class | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | --- | ---
Region 64.1 | TPP_AA_metabolism | Putative | 33,221 | 59,104 |

c00081_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_81)

Region | Type | Class | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | --- | ---
Region 81.1 | Rnf_complex | E-MGC | 1 | 3,191 | Rnf complex C. sporogenes | RNF | 50%

c00110_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_110)

Region | Type | Class | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | --- | ---
Region 110.1 | succinate2propionate | SCFA | 1 | 17,473 | Succinate to propionate B. theta | PRO | 66%

Region | Type | Class | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | --- | ---
Region 20.1 | NADH_dehydrogenase_I | E-MGC | 54,747 | 84,938 | NADH dehydrogenase I Bacteroides sp. | NADHD | 66%
Region 25.1 | Pyruvate2acetate-formate | SCFA | 1 | 13,087 | Pyruvate to acetate-formate B. thetaiotaomicron | PFL_acetate | 100%
Region 25.2 | TPP_fatty_acids | Putative | 31,168 | 56,024 |
Region 64.1 | TPP_AA_metabolism | Putative | 33,221 | 59,104 |
Region 81.1 | Rnf_complex | E-MGC | 1 | 3,191 | Rnf complex C. sporogenes | RNF | 50%
Region 110.1 | succinate2propionate | SCFA | 1 | 17,473 | Succinate to propionate B. theta | PRO | 66%

No primary metabolite regions were found in these records:
  c00001_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_1)
  c00002_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_2)
  c00003_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_3)
  c00004_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_4)
  c00005_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_5)
  c00006_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_6)
  c00007_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_7)
  c00008_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_8)
  c00009_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_9)
  c00010_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_10)
  c00011_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_11)
  c00012_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_12)
  c00013_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_13)
  c00014_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_14)
  c00015_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_15)
  c00016_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_16)
  c00017_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_17)
  c00018_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_18)
  c00019_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_19)
  c00021_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_21)
  c00022_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_22)
  c00023_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_23)
  c00024_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_24)
  c00026_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_26)
  c00027_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_27)
  c00028_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_28)
  c00029_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_29)
  c00030_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_30)
  c00031_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_31)
  c00032_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_32)
  c00033_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_33)
  c00034_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_34)
  c00035_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_35)
  c00036_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_36)
  c00037_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_37)
  c00038_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_38)
  c00039_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_39)
  c00040_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_40)
  c00041_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_41)
  c00042_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_42)
  c00043_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_43)
  c00044_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_44)
  c00045_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_45)
  c00046_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_46)
  c00047_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_47)
  c00048_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_48)
  c00049_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_49)
  c00050_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_50)
  c00051_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_51)
  c00052_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_52)
  c00053_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_53)
  c00054_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_54)
  c00055_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_55)
  c00056_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_56)
  c00057_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_57)
  c00058_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_58)
  c00059_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_59)
  c00060_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_60)
  c00061_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_61)
  c00062_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_62)
  c00063_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_63)
  c00065_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_65)
  c00066_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_66)
  c00067_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_67)
  c00068_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_68)
  c00069_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_69)
  c00070_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_70)
  c00071_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_71)
  c00072_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_72)
  c00073_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_73)
  c00074_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_74)
  c00075_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_75)
  c00076_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_76)
  c00077_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_77)
  c00078_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_78)
  c00079_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_79)
  c00080_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_80)
  c00082_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_82)
  c00083_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_83)
  c00084_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_84)
  c00085_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_85)
  c00086_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_86)
  c00087_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_87)
  c00088_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_88)
  c00089_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_89)
  c00090_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_90)
  c00091_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_91)
  c00092_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_92)
  c00093_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_93)
  c00094_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_94)
  c00095_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_95)
  c00096_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_96)
  c00097_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_97)
  c00098_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_98)
  c00099_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_99)
  c00100_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_100)
  c00101_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_101)
  c00102_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_102)
  c00103_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_103)
  c00104_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_104)
  c00105_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_105)
  c00106_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_106)
  c00107_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_107)
  c00108_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_108)
  c00109_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_109)
  c00111_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_111)
  c00112_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_112)
  c00113_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_113)
  c00114_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_114)
  c00115_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_115)
  c00116_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_116)
  c00117_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_117)
  c00118_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_118)
  c00119_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_119)
  c00120_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_120)
  c00121_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_121)
  c00122_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_122)
  c00123_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_123)
  c00124_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_124)
  c00125_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_125)
  c00126_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_126)
  c00127_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_127)
  c00128_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_128)
  c00129_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_129)
  c00130_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_130)
  c00131_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_131)
  c00132_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_132)
  c00133_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_133)
  c00134_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_134)
  c00135_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_135)
  c00136_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_136)
  c00137_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_137)
  c00138_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_138)
  c00139_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_139)
  c00140_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_140)
  c00141_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_141)
  c00142_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_142)
  c00143_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_143)
  c00144_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_144)
  c00145_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_145)
  c00146_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_146)
  c00147_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_147)
  c00148_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_148)
  c00149_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_149)
  c00150_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_150)
  c00151_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_151)
  c00152_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_152)
  c00153_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_153)
  c00154_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_154)
  c00155_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_155)
  c00156_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_156)
  c00157_gnlPro.. (original name was: gnl|Prokka|PGELHKDB_157)

Compact view
c00020_gnlPro.. - Region 1 - NADH_dehydrogenase_I
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Download region GenBank file
Location: 54,747 - 84,938 nt. (total: 30,192 nt) Show pHMM detection rules used
NADH_dehydrogenase_I: (Oxidored_q4 and Oxidored_q6 and Complex1_30kDa and Complex1_49kDa and NADHdh and Oxidored_q3 and Oxidored_q2 and minimum(4, [Fe-2S_thioredx, Fer2_4, Fer4_7, Molybdop_Fe4S4, Molydop_binding, NADH-G_4Fe-4S_3, NADH_4Fe-4S, Proton_antipo_M, Proton_antipo_N, SLBB]))

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
resistance genes
encapsulation genes
electron transport genes
other genes
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
KnownClusterBlast
Similar known gene clusters
Shows clusters from the gutSMASH KnownClusterBlast database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
c00025_gnlPro.. - Region 1 - Pyruvate2acetate-formate
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Download region GenBank file
Location: 1 - 13,087 nt. (total: 13,087 nt) Show pHMM detection rules used
Region on contig edge.
Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
resistance genes
encapsulation genes
electron transport genes
other genes
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
KnownClusterBlast
Similar known gene clusters
Shows clusters from the gutSMASH KnownClusterBlast database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
c00025_gnlPro.. - Region 2 - TPP_fatty_acids
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Download region GenBank file
Location: 31,168 - 56,024 nt. (total: 24,857 nt) Show pHMM detection rules used
TPP_fatty_acids: (TPP_enzyme_C and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and not (POR or POR_N))

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
resistance genes
encapsulation genes
electron transport genes
other genes
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
KnownClusterBlast
Similar known gene clusters
Shows clusters from the gutSMASH KnownClusterBlast database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.

No matches found.

c00064_gnlPro.. - Region 1 - TPP_AA_metabolism
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Download region GenBank file
Location: 33,221 - 59,104 nt. (total: 25,884 nt) Show pHMM detection rules used
TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
resistance genes
encapsulation genes
electron transport genes
other genes
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
KnownClusterBlast
Similar known gene clusters
Shows clusters from the gutSMASH KnownClusterBlast database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.

No matches found.

c00081_gnlPro.. - Region 1 - Rnf_complex
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Download region GenBank file
Location: 1 - 3,191 nt. (total: 3,191 nt) Show pHMM detection rules used
Region on contig edge.
Rnf_complex: (Complex1_51K and minimum(5, [FMN_bind, FeS, Fer4, Fer4_9, NQR2_RnfD_RnfE, Rnf-Nqr, RnfC_N, SLBB]))

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
resistance genes
encapsulation genes
electron transport genes
other genes
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
KnownClusterBlast
Similar known gene clusters
Shows clusters from the gutSMASH KnownClusterBlast database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
c00110_gnlPro.. - Region 1 - succinate2propionate
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Download region GenBank file
Location: 1 - 17,473 nt. (total: 17,473 nt) Show pHMM detection rules used
Region on contig edge.
succinate2propionate: (minimum(4, [AcetylCoA_hyd_C, AcetylCoA_hydro, B12-binding, Biotin_lipoyl, Glyoxalase_4, HMGL-like, MM_CoA_mutase, MeaB, OAD_beta, OAD_gamma, PYC_OADA]) and minimum(1, [CT_Btheta, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, CT_Vparvula]) and not Cytidylate_kin)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
resistance genes
encapsulation genes
electron transport genes
other genes
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
KnownClusterBlast
Similar known gene clusters
Shows clusters from the gutSMASH KnownClusterBlast database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.