GCA_034123365.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaPBHCGJCE_11 (original name was: gnl|Prokka|PBHCGJCE_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	phosphonate	141,515	155,074	polysaccharide B	Saccharide	13%

gnlProkkaPBHCGJCE_14 (original name was: gnl|Prokka|PBHCGJCE_14)

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	lanthipeptide-class-i	79,698	109,902

gnlProkkaPBHCGJCE_29 (original name was: gnl|Prokka|PBHCGJCE_29)

Region	Type	From	To	Most similar known cluster		Similarity
Region 29.1	RRE-containing	135,237	155,590	polysaccharide C	Saccharide	20%

No secondary metabolite regions were found in these records:: gnlProkkaPBHCGJCE_1 (original name was: gnl|Prokka|PBHCGJCE_1); gnlProkkaPBHCGJCE_2 (original name was: gnl|Prokka|PBHCGJCE_2); gnlProkkaPBHCGJCE_3 (original name was: gnl|Prokka|PBHCGJCE_3); gnlProkkaPBHCGJCE_4 (original name was: gnl|Prokka|PBHCGJCE_4); gnlProkkaPBHCGJCE_5 (original name was: gnl|Prokka|PBHCGJCE_5); gnlProkkaPBHCGJCE_6 (original name was: gnl|Prokka|PBHCGJCE_6); gnlProkkaPBHCGJCE_7 (original name was: gnl|Prokka|PBHCGJCE_7); gnlProkkaPBHCGJCE_8 (original name was: gnl|Prokka|PBHCGJCE_8); gnlProkkaPBHCGJCE_9 (original name was: gnl|Prokka|PBHCGJCE_9); gnlProkkaPBHCGJCE_10 (original name was: gnl|Prokka|PBHCGJCE_10); gnlProkkaPBHCGJCE_12 (original name was: gnl|Prokka|PBHCGJCE_12); gnlProkkaPBHCGJCE_13 (original name was: gnl|Prokka|PBHCGJCE_13); gnlProkkaPBHCGJCE_15 (original name was: gnl|Prokka|PBHCGJCE_15); gnlProkkaPBHCGJCE_16 (original name was: gnl|Prokka|PBHCGJCE_16); gnlProkkaPBHCGJCE_17 (original name was: gnl|Prokka|PBHCGJCE_17); gnlProkkaPBHCGJCE_18 (original name was: gnl|Prokka|PBHCGJCE_18); gnlProkkaPBHCGJCE_19 (original name was: gnl|Prokka|PBHCGJCE_19); gnlProkkaPBHCGJCE_20 (original name was: gnl|Prokka|PBHCGJCE_20); gnlProkkaPBHCGJCE_21 (original name was: gnl|Prokka|PBHCGJCE_21); gnlProkkaPBHCGJCE_22 (original name was: gnl|Prokka|PBHCGJCE_22); gnlProkkaPBHCGJCE_23 (original name was: gnl|Prokka|PBHCGJCE_23); gnlProkkaPBHCGJCE_24 (original name was: gnl|Prokka|PBHCGJCE_24); gnlProkkaPBHCGJCE_25 (original name was: gnl|Prokka|PBHCGJCE_25); gnlProkkaPBHCGJCE_26 (original name was: gnl|Prokka|PBHCGJCE_26); gnlProkkaPBHCGJCE_27 (original name was: gnl|Prokka|PBHCGJCE_27); gnlProkkaPBHCGJCE_28 (original name was: gnl|Prokka|PBHCGJCE_28); gnlProkkaPBHCGJCE_30 (original name was: gnl|Prokka|PBHCGJCE_30); gnlProkkaPBHCGJCE_31 (original name was: gnl|Prokka|PBHCGJCE_31); gnlProkkaPBHCGJCE_32 (original name was: gnl|Prokka|PBHCGJCE_32); gnlProkkaPBHCGJCE_33 (original name was: gnl|Prokka|PBHCGJCE_33); gnlProkkaPBHCGJCE_34 (original name was: gnl|Prokka|PBHCGJCE_34); gnlProkkaPBHCGJCE_35 (original name was: gnl|Prokka|PBHCGJCE_35); gnlProkkaPBHCGJCE_36 (original name was: gnl|Prokka|PBHCGJCE_36); gnlProkkaPBHCGJCE_37 (original name was: gnl|Prokka|PBHCGJCE_37); gnlProkkaPBHCGJCE_38 (original name was: gnl|Prokka|PBHCGJCE_38); gnlProkkaPBHCGJCE_39 (original name was: gnl|Prokka|PBHCGJCE_39); gnlProkkaPBHCGJCE_40 (original name was: gnl|Prokka|PBHCGJCE_40); gnlProkkaPBHCGJCE_41 (original name was: gnl|Prokka|PBHCGJCE_41); gnlProkkaPBHCGJCE_42 (original name was: gnl|Prokka|PBHCGJCE_42); gnlProkkaPBHCGJCE_43 (original name was: gnl|Prokka|PBHCGJCE_43)

Compact view

gnlProkkaPBHCGJCE_11 - Region 1 - phosphonate

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Location: 141,515 - 155,074 nt. (total: 13,560 nt) Show pHMM detection rules used

phosphonate: (phosphonates and minimum(1, [2-Hacid_dh_C, Aldedh, Aminotran_1_2, Aminotran_5, AurF, CTP_transf_like, DUF4992, Fe-ADH, HMGL-like, Metallophos_2, NTP_transf_3, NTP_transf_5, PALP, PEP_mutase, TPP_enzyme_C, TPP_enzyme_N, phosphonates]) and not (phosphonatesHydrolase or phosphonatesMeIsocitrateLyase))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

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Gene overview

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Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaPBHCGJCE_14 - Region 1 - lanthipeptide-class-i

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Location: 79,698 - 109,902 nt. (total: 30,205 nt) Show pHMM detection rules used

lanthipeptide-class-i: ((LANC_like and (Lant_dehydr_N or Lant_dehydr_C)) and not (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.

gnlProkkaPBHCGJCE_29 - Region 1 - RRE-containing

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Location: 135,237 - 155,590 nt. (total: 20,354 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1