GCA_034124945.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaAPNHNFNG_34 (original name was: gnl|Prokka|APNHNFNG_34)

Region	Type	From	To	Most similar known cluster		Similarity
Region 34.1	RRE-containing	1,772	22,559

gnlProkkaAPNHNFNG_65 (original name was: gnl|Prokka|APNHNFNG_65)

Region	Type	From	To	Most similar known cluster		Similarity
Region 65.1	RiPP-like	1	8,690
Region 65.2	arylpolyene	186,511	234,022	flexirubin	Other	48%

Region	Type	From	To	Most similar known cluster	Similarity
Region 34.1	RRE-containing	1,772	22,559
Region 65.1	RiPP-like	1	8,690
Region 65.2	arylpolyene	186,511	234,022	flexirubin	Other	48%

No secondary metabolite regions were found in these records:: gnlProkkaAPNHNFNG_1 (original name was: gnl|Prokka|APNHNFNG_1); gnlProkkaAPNHNFNG_2 (original name was: gnl|Prokka|APNHNFNG_2); gnlProkkaAPNHNFNG_3 (original name was: gnl|Prokka|APNHNFNG_3); gnlProkkaAPNHNFNG_4 (original name was: gnl|Prokka|APNHNFNG_4); gnlProkkaAPNHNFNG_5 (original name was: gnl|Prokka|APNHNFNG_5); gnlProkkaAPNHNFNG_6 (original name was: gnl|Prokka|APNHNFNG_6); gnlProkkaAPNHNFNG_7 (original name was: gnl|Prokka|APNHNFNG_7); gnlProkkaAPNHNFNG_8 (original name was: gnl|Prokka|APNHNFNG_8); gnlProkkaAPNHNFNG_9 (original name was: gnl|Prokka|APNHNFNG_9); gnlProkkaAPNHNFNG_10 (original name was: gnl|Prokka|APNHNFNG_10); gnlProkkaAPNHNFNG_11 (original name was: gnl|Prokka|APNHNFNG_11); gnlProkkaAPNHNFNG_12 (original name was: gnl|Prokka|APNHNFNG_12); gnlProkkaAPNHNFNG_13 (original name was: gnl|Prokka|APNHNFNG_13); gnlProkkaAPNHNFNG_14 (original name was: gnl|Prokka|APNHNFNG_14); gnlProkkaAPNHNFNG_15 (original name was: gnl|Prokka|APNHNFNG_15); gnlProkkaAPNHNFNG_16 (original name was: gnl|Prokka|APNHNFNG_16); gnlProkkaAPNHNFNG_17 (original name was: gnl|Prokka|APNHNFNG_17); gnlProkkaAPNHNFNG_18 (original name was: gnl|Prokka|APNHNFNG_18); gnlProkkaAPNHNFNG_19 (original name was: gnl|Prokka|APNHNFNG_19); gnlProkkaAPNHNFNG_20 (original name was: gnl|Prokka|APNHNFNG_20); gnlProkkaAPNHNFNG_21 (original name was: gnl|Prokka|APNHNFNG_21); gnlProkkaAPNHNFNG_22 (original name was: gnl|Prokka|APNHNFNG_22); gnlProkkaAPNHNFNG_23 (original name was: gnl|Prokka|APNHNFNG_23); gnlProkkaAPNHNFNG_24 (original name was: gnl|Prokka|APNHNFNG_24); gnlProkkaAPNHNFNG_25 (original name was: gnl|Prokka|APNHNFNG_25); gnlProkkaAPNHNFNG_26 (original name was: gnl|Prokka|APNHNFNG_26); gnlProkkaAPNHNFNG_27 (original name was: gnl|Prokka|APNHNFNG_27); gnlProkkaAPNHNFNG_28 (original name was: gnl|Prokka|APNHNFNG_28); gnlProkkaAPNHNFNG_29 (original name was: gnl|Prokka|APNHNFNG_29); gnlProkkaAPNHNFNG_30 (original name was: gnl|Prokka|APNHNFNG_30); gnlProkkaAPNHNFNG_31 (original name was: gnl|Prokka|APNHNFNG_31); gnlProkkaAPNHNFNG_32 (original name was: gnl|Prokka|APNHNFNG_32); gnlProkkaAPNHNFNG_33 (original name was: gnl|Prokka|APNHNFNG_33); gnlProkkaAPNHNFNG_35 (original name was: gnl|Prokka|APNHNFNG_35); gnlProkkaAPNHNFNG_36 (original name was: gnl|Prokka|APNHNFNG_36); gnlProkkaAPNHNFNG_37 (original name was: gnl|Prokka|APNHNFNG_37); gnlProkkaAPNHNFNG_38 (original name was: gnl|Prokka|APNHNFNG_38); gnlProkkaAPNHNFNG_39 (original name was: gnl|Prokka|APNHNFNG_39); gnlProkkaAPNHNFNG_40 (original name was: gnl|Prokka|APNHNFNG_40); gnlProkkaAPNHNFNG_41 (original name was: gnl|Prokka|APNHNFNG_41); gnlProkkaAPNHNFNG_42 (original name was: gnl|Prokka|APNHNFNG_42); gnlProkkaAPNHNFNG_43 (original name was: gnl|Prokka|APNHNFNG_43); gnlProkkaAPNHNFNG_44 (original name was: gnl|Prokka|APNHNFNG_44); gnlProkkaAPNHNFNG_45 (original name was: gnl|Prokka|APNHNFNG_45); gnlProkkaAPNHNFNG_46 (original name was: gnl|Prokka|APNHNFNG_46); gnlProkkaAPNHNFNG_47 (original name was: gnl|Prokka|APNHNFNG_47); gnlProkkaAPNHNFNG_48 (original name was: gnl|Prokka|APNHNFNG_48); gnlProkkaAPNHNFNG_49 (original name was: gnl|Prokka|APNHNFNG_49); gnlProkkaAPNHNFNG_50 (original name was: gnl|Prokka|APNHNFNG_50); gnlProkkaAPNHNFNG_51 (original name was: gnl|Prokka|APNHNFNG_51); gnlProkkaAPNHNFNG_52 (original name was: gnl|Prokka|APNHNFNG_52); gnlProkkaAPNHNFNG_53 (original name was: gnl|Prokka|APNHNFNG_53); gnlProkkaAPNHNFNG_54 (original name was: gnl|Prokka|APNHNFNG_54); gnlProkkaAPNHNFNG_55 (original name was: gnl|Prokka|APNHNFNG_55); gnlProkkaAPNHNFNG_56 (original name was: gnl|Prokka|APNHNFNG_56); gnlProkkaAPNHNFNG_57 (original name was: gnl|Prokka|APNHNFNG_57); gnlProkkaAPNHNFNG_58 (original name was: gnl|Prokka|APNHNFNG_58); gnlProkkaAPNHNFNG_59 (original name was: gnl|Prokka|APNHNFNG_59); gnlProkkaAPNHNFNG_60 (original name was: gnl|Prokka|APNHNFNG_60); gnlProkkaAPNHNFNG_61 (original name was: gnl|Prokka|APNHNFNG_61); gnlProkkaAPNHNFNG_62 (original name was: gnl|Prokka|APNHNFNG_62); gnlProkkaAPNHNFNG_63 (original name was: gnl|Prokka|APNHNFNG_63); gnlProkkaAPNHNFNG_64 (original name was: gnl|Prokka|APNHNFNG_64); gnlProkkaAPNHNFNG_66 (original name was: gnl|Prokka|APNHNFNG_66)

Compact view

gnlProkkaAPNHNFNG_34 - Region 1 - RRE-containing

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Location: 1,772 - 22,559 nt. (total: 20,788 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaAPNHNFNG_65 - Region 1 - RiPP-like

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Location: 1 - 8,690 nt. (total: 8,690 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaAPNHNFNG_65 - Region 2 - arylpolyene

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Location: 186,511 - 234,022 nt. (total: 47,512 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

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Similar known gene clusters from MIBiG 3.1

NRPS/PKS substrates

NRPS/PKS substrate predictions

ctg65_132

AMP-binding (55..293): X

nrpys: Asp, Asn, Glu, Gln, Aad

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: YMRMVITSSK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)