GCA_034127985.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaIGNFLOMI_23 (original name was: gnl|Prokka|IGNFLOMI_23)

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	RiPP-like	24,389	34,251

gnlProkkaIGNFLOMI_42 (original name was: gnl|Prokka|IGNFLOMI_42)

Region	Type	From	To	Most similar known cluster		Similarity
Region 42.1	RRE-containing	170,945	191,732

gnlProkkaIGNFLOMI_47 (original name was: gnl|Prokka|IGNFLOMI_47)

Region	Type	From	To	Most similar known cluster		Similarity
Region 47.1	arylpolyene	167,615	215,126	flexirubin	Other	36%

Region	Type	From	To	Most similar known cluster	Similarity
Region 23.1	RiPP-like	24,389	34,251
Region 42.1	RRE-containing	170,945	191,732
Region 47.1	arylpolyene	167,615	215,126	flexirubin	Other	36%

No secondary metabolite regions were found in these records:: gnlProkkaIGNFLOMI_1 (original name was: gnl|Prokka|IGNFLOMI_1); gnlProkkaIGNFLOMI_2 (original name was: gnl|Prokka|IGNFLOMI_2); gnlProkkaIGNFLOMI_3 (original name was: gnl|Prokka|IGNFLOMI_3); gnlProkkaIGNFLOMI_4 (original name was: gnl|Prokka|IGNFLOMI_4); gnlProkkaIGNFLOMI_5 (original name was: gnl|Prokka|IGNFLOMI_5); gnlProkkaIGNFLOMI_6 (original name was: gnl|Prokka|IGNFLOMI_6); gnlProkkaIGNFLOMI_7 (original name was: gnl|Prokka|IGNFLOMI_7); gnlProkkaIGNFLOMI_8 (original name was: gnl|Prokka|IGNFLOMI_8); gnlProkkaIGNFLOMI_9 (original name was: gnl|Prokka|IGNFLOMI_9); gnlProkkaIGNFLOMI_10 (original name was: gnl|Prokka|IGNFLOMI_10); gnlProkkaIGNFLOMI_11 (original name was: gnl|Prokka|IGNFLOMI_11); gnlProkkaIGNFLOMI_12 (original name was: gnl|Prokka|IGNFLOMI_12); gnlProkkaIGNFLOMI_13 (original name was: gnl|Prokka|IGNFLOMI_13); gnlProkkaIGNFLOMI_14 (original name was: gnl|Prokka|IGNFLOMI_14); gnlProkkaIGNFLOMI_15 (original name was: gnl|Prokka|IGNFLOMI_15); gnlProkkaIGNFLOMI_16 (original name was: gnl|Prokka|IGNFLOMI_16); gnlProkkaIGNFLOMI_17 (original name was: gnl|Prokka|IGNFLOMI_17); gnlProkkaIGNFLOMI_18 (original name was: gnl|Prokka|IGNFLOMI_18); gnlProkkaIGNFLOMI_19 (original name was: gnl|Prokka|IGNFLOMI_19); gnlProkkaIGNFLOMI_20 (original name was: gnl|Prokka|IGNFLOMI_20); gnlProkkaIGNFLOMI_21 (original name was: gnl|Prokka|IGNFLOMI_21); gnlProkkaIGNFLOMI_22 (original name was: gnl|Prokka|IGNFLOMI_22); gnlProkkaIGNFLOMI_24 (original name was: gnl|Prokka|IGNFLOMI_24); gnlProkkaIGNFLOMI_25 (original name was: gnl|Prokka|IGNFLOMI_25); gnlProkkaIGNFLOMI_26 (original name was: gnl|Prokka|IGNFLOMI_26); gnlProkkaIGNFLOMI_27 (original name was: gnl|Prokka|IGNFLOMI_27); gnlProkkaIGNFLOMI_28 (original name was: gnl|Prokka|IGNFLOMI_28); gnlProkkaIGNFLOMI_29 (original name was: gnl|Prokka|IGNFLOMI_29); gnlProkkaIGNFLOMI_30 (original name was: gnl|Prokka|IGNFLOMI_30); gnlProkkaIGNFLOMI_31 (original name was: gnl|Prokka|IGNFLOMI_31); gnlProkkaIGNFLOMI_32 (original name was: gnl|Prokka|IGNFLOMI_32); gnlProkkaIGNFLOMI_33 (original name was: gnl|Prokka|IGNFLOMI_33); gnlProkkaIGNFLOMI_34 (original name was: gnl|Prokka|IGNFLOMI_34); gnlProkkaIGNFLOMI_35 (original name was: gnl|Prokka|IGNFLOMI_35); gnlProkkaIGNFLOMI_36 (original name was: gnl|Prokka|IGNFLOMI_36); gnlProkkaIGNFLOMI_37 (original name was: gnl|Prokka|IGNFLOMI_37); gnlProkkaIGNFLOMI_38 (original name was: gnl|Prokka|IGNFLOMI_38); gnlProkkaIGNFLOMI_39 (original name was: gnl|Prokka|IGNFLOMI_39); gnlProkkaIGNFLOMI_40 (original name was: gnl|Prokka|IGNFLOMI_40); gnlProkkaIGNFLOMI_41 (original name was: gnl|Prokka|IGNFLOMI_41); gnlProkkaIGNFLOMI_43 (original name was: gnl|Prokka|IGNFLOMI_43); gnlProkkaIGNFLOMI_44 (original name was: gnl|Prokka|IGNFLOMI_44); gnlProkkaIGNFLOMI_45 (original name was: gnl|Prokka|IGNFLOMI_45); gnlProkkaIGNFLOMI_46 (original name was: gnl|Prokka|IGNFLOMI_46); gnlProkkaIGNFLOMI_48 (original name was: gnl|Prokka|IGNFLOMI_48); gnlProkkaIGNFLOMI_49 (original name was: gnl|Prokka|IGNFLOMI_49); gnlProkkaIGNFLOMI_50 (original name was: gnl|Prokka|IGNFLOMI_50); gnlProkkaIGNFLOMI_51 (original name was: gnl|Prokka|IGNFLOMI_51); gnlProkkaIGNFLOMI_52 (original name was: gnl|Prokka|IGNFLOMI_52); gnlProkkaIGNFLOMI_53 (original name was: gnl|Prokka|IGNFLOMI_53); gnlProkkaIGNFLOMI_54 (original name was: gnl|Prokka|IGNFLOMI_54); gnlProkkaIGNFLOMI_55 (original name was: gnl|Prokka|IGNFLOMI_55); gnlProkkaIGNFLOMI_56 (original name was: gnl|Prokka|IGNFLOMI_56); gnlProkkaIGNFLOMI_57 (original name was: gnl|Prokka|IGNFLOMI_57)

Compact view

gnlProkkaIGNFLOMI_23 - Region 1 - RiPP-like

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Location: 24,389 - 34,251 nt. (total: 9,863 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaIGNFLOMI_42 - Region 1 - RRE-containing

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Location: 170,945 - 191,732 nt. (total: 20,788 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaIGNFLOMI_47 - Region 1 - arylpolyene

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Location: 167,615 - 215,126 nt. (total: 47,512 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

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Similar known gene clusters from MIBiG 3.1