GCA_034129145.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaNIBMOGML_46 (original name was: gnl|Prokka|NIBMOGML_46)

Region	Type	From	To	Most similar known cluster		Similarity
Region 46.1	arylpolyene	50,317	98,099	flexirubin	Other	48%

gnlProkkaNIBMOGML_64 (original name was: gnl|Prokka|NIBMOGML_64)

Region	Type	From	To	Most similar known cluster		Similarity
Region 64.1	RRE-containing	2,027	22,257

No secondary metabolite regions were found in these records:: gnlProkkaNIBMOGML_1 (original name was: gnl|Prokka|NIBMOGML_1); gnlProkkaNIBMOGML_2 (original name was: gnl|Prokka|NIBMOGML_2); gnlProkkaNIBMOGML_3 (original name was: gnl|Prokka|NIBMOGML_3); gnlProkkaNIBMOGML_4 (original name was: gnl|Prokka|NIBMOGML_4); gnlProkkaNIBMOGML_5 (original name was: gnl|Prokka|NIBMOGML_5); gnlProkkaNIBMOGML_6 (original name was: gnl|Prokka|NIBMOGML_6); gnlProkkaNIBMOGML_7 (original name was: gnl|Prokka|NIBMOGML_7); gnlProkkaNIBMOGML_8 (original name was: gnl|Prokka|NIBMOGML_8); gnlProkkaNIBMOGML_9 (original name was: gnl|Prokka|NIBMOGML_9); gnlProkkaNIBMOGML_10 (original name was: gnl|Prokka|NIBMOGML_10); gnlProkkaNIBMOGML_11 (original name was: gnl|Prokka|NIBMOGML_11); gnlProkkaNIBMOGML_12 (original name was: gnl|Prokka|NIBMOGML_12); gnlProkkaNIBMOGML_13 (original name was: gnl|Prokka|NIBMOGML_13); gnlProkkaNIBMOGML_14 (original name was: gnl|Prokka|NIBMOGML_14); gnlProkkaNIBMOGML_15 (original name was: gnl|Prokka|NIBMOGML_15); gnlProkkaNIBMOGML_16 (original name was: gnl|Prokka|NIBMOGML_16); gnlProkkaNIBMOGML_17 (original name was: gnl|Prokka|NIBMOGML_17); gnlProkkaNIBMOGML_18 (original name was: gnl|Prokka|NIBMOGML_18); gnlProkkaNIBMOGML_19 (original name was: gnl|Prokka|NIBMOGML_19); gnlProkkaNIBMOGML_20 (original name was: gnl|Prokka|NIBMOGML_20); gnlProkkaNIBMOGML_21 (original name was: gnl|Prokka|NIBMOGML_21); gnlProkkaNIBMOGML_22 (original name was: gnl|Prokka|NIBMOGML_22); gnlProkkaNIBMOGML_23 (original name was: gnl|Prokka|NIBMOGML_23); gnlProkkaNIBMOGML_24 (original name was: gnl|Prokka|NIBMOGML_24); gnlProkkaNIBMOGML_25 (original name was: gnl|Prokka|NIBMOGML_25); gnlProkkaNIBMOGML_26 (original name was: gnl|Prokka|NIBMOGML_26); gnlProkkaNIBMOGML_27 (original name was: gnl|Prokka|NIBMOGML_27); gnlProkkaNIBMOGML_28 (original name was: gnl|Prokka|NIBMOGML_28); gnlProkkaNIBMOGML_29 (original name was: gnl|Prokka|NIBMOGML_29); gnlProkkaNIBMOGML_30 (original name was: gnl|Prokka|NIBMOGML_30); gnlProkkaNIBMOGML_31 (original name was: gnl|Prokka|NIBMOGML_31); gnlProkkaNIBMOGML_32 (original name was: gnl|Prokka|NIBMOGML_32); gnlProkkaNIBMOGML_33 (original name was: gnl|Prokka|NIBMOGML_33); gnlProkkaNIBMOGML_34 (original name was: gnl|Prokka|NIBMOGML_34); gnlProkkaNIBMOGML_35 (original name was: gnl|Prokka|NIBMOGML_35); gnlProkkaNIBMOGML_36 (original name was: gnl|Prokka|NIBMOGML_36); gnlProkkaNIBMOGML_37 (original name was: gnl|Prokka|NIBMOGML_37); gnlProkkaNIBMOGML_38 (original name was: gnl|Prokka|NIBMOGML_38); gnlProkkaNIBMOGML_39 (original name was: gnl|Prokka|NIBMOGML_39); gnlProkkaNIBMOGML_40 (original name was: gnl|Prokka|NIBMOGML_40); gnlProkkaNIBMOGML_41 (original name was: gnl|Prokka|NIBMOGML_41); gnlProkkaNIBMOGML_42 (original name was: gnl|Prokka|NIBMOGML_42); gnlProkkaNIBMOGML_43 (original name was: gnl|Prokka|NIBMOGML_43); gnlProkkaNIBMOGML_44 (original name was: gnl|Prokka|NIBMOGML_44); gnlProkkaNIBMOGML_45 (original name was: gnl|Prokka|NIBMOGML_45); gnlProkkaNIBMOGML_47 (original name was: gnl|Prokka|NIBMOGML_47); gnlProkkaNIBMOGML_48 (original name was: gnl|Prokka|NIBMOGML_48); gnlProkkaNIBMOGML_49 (original name was: gnl|Prokka|NIBMOGML_49); gnlProkkaNIBMOGML_50 (original name was: gnl|Prokka|NIBMOGML_50); gnlProkkaNIBMOGML_51 (original name was: gnl|Prokka|NIBMOGML_51); gnlProkkaNIBMOGML_52 (original name was: gnl|Prokka|NIBMOGML_52); gnlProkkaNIBMOGML_53 (original name was: gnl|Prokka|NIBMOGML_53); gnlProkkaNIBMOGML_54 (original name was: gnl|Prokka|NIBMOGML_54); gnlProkkaNIBMOGML_55 (original name was: gnl|Prokka|NIBMOGML_55); gnlProkkaNIBMOGML_56 (original name was: gnl|Prokka|NIBMOGML_56); gnlProkkaNIBMOGML_57 (original name was: gnl|Prokka|NIBMOGML_57); gnlProkkaNIBMOGML_58 (original name was: gnl|Prokka|NIBMOGML_58); gnlProkkaNIBMOGML_59 (original name was: gnl|Prokka|NIBMOGML_59); gnlProkkaNIBMOGML_60 (original name was: gnl|Prokka|NIBMOGML_60); gnlProkkaNIBMOGML_61 (original name was: gnl|Prokka|NIBMOGML_61); gnlProkkaNIBMOGML_62 (original name was: gnl|Prokka|NIBMOGML_62); gnlProkkaNIBMOGML_63 (original name was: gnl|Prokka|NIBMOGML_63); gnlProkkaNIBMOGML_65 (original name was: gnl|Prokka|NIBMOGML_65); gnlProkkaNIBMOGML_66 (original name was: gnl|Prokka|NIBMOGML_66); gnlProkkaNIBMOGML_67 (original name was: gnl|Prokka|NIBMOGML_67); gnlProkkaNIBMOGML_68 (original name was: gnl|Prokka|NIBMOGML_68); gnlProkkaNIBMOGML_69 (original name was: gnl|Prokka|NIBMOGML_69); gnlProkkaNIBMOGML_70 (original name was: gnl|Prokka|NIBMOGML_70); gnlProkkaNIBMOGML_71 (original name was: gnl|Prokka|NIBMOGML_71); gnlProkkaNIBMOGML_72 (original name was: gnl|Prokka|NIBMOGML_72); gnlProkkaNIBMOGML_73 (original name was: gnl|Prokka|NIBMOGML_73); gnlProkkaNIBMOGML_74 (original name was: gnl|Prokka|NIBMOGML_74); gnlProkkaNIBMOGML_75 (original name was: gnl|Prokka|NIBMOGML_75)

Compact view

gnlProkkaNIBMOGML_46 - Region 1 - arylpolyene

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Location: 50,317 - 98,099 nt. (total: 47,783 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

NRPS/PKS substrates

NRPS/PKS substrate predictions

ctg46_59

AMP-binding (56..290): X

nrpys: Asp, Asn, Glu, Gln, Aad

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: YMRMIITSSK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

gnlProkkaNIBMOGML_64 - Region 1 - RRE-containing

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Location: 2,027 - 22,257 nt. (total: 20,231 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.