GCA_034129485.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaFHFOCMON_15 (original name was: gnl|Prokka|FHFOCMON_15)

Region	Type	From	To	Most similar known cluster		Similarity
Region 15.1	arylpolyene	465,890	513,428	flexirubin	Other	48%

gnlProkkaFHFOCMON_33 (original name was: gnl|Prokka|FHFOCMON_33)

Region	Type	From	To	Most similar known cluster		Similarity
Region 33.1	RRE-containing	334,776	350,821

gnlProkkaFHFOCMON_36 (original name was: gnl|Prokka|FHFOCMON_36)

Region	Type	From	To	Most similar known cluster		Similarity
Region 36.1	RiPP-like	90,276	102,450

No secondary metabolite regions were found in these records:: gnlProkkaFHFOCMON_1 (original name was: gnl|Prokka|FHFOCMON_1); gnlProkkaFHFOCMON_2 (original name was: gnl|Prokka|FHFOCMON_2); gnlProkkaFHFOCMON_3 (original name was: gnl|Prokka|FHFOCMON_3); gnlProkkaFHFOCMON_4 (original name was: gnl|Prokka|FHFOCMON_4); gnlProkkaFHFOCMON_5 (original name was: gnl|Prokka|FHFOCMON_5); gnlProkkaFHFOCMON_6 (original name was: gnl|Prokka|FHFOCMON_6); gnlProkkaFHFOCMON_7 (original name was: gnl|Prokka|FHFOCMON_7); gnlProkkaFHFOCMON_8 (original name was: gnl|Prokka|FHFOCMON_8); gnlProkkaFHFOCMON_9 (original name was: gnl|Prokka|FHFOCMON_9); gnlProkkaFHFOCMON_10 (original name was: gnl|Prokka|FHFOCMON_10); gnlProkkaFHFOCMON_11 (original name was: gnl|Prokka|FHFOCMON_11); gnlProkkaFHFOCMON_12 (original name was: gnl|Prokka|FHFOCMON_12); gnlProkkaFHFOCMON_13 (original name was: gnl|Prokka|FHFOCMON_13); gnlProkkaFHFOCMON_14 (original name was: gnl|Prokka|FHFOCMON_14); gnlProkkaFHFOCMON_16 (original name was: gnl|Prokka|FHFOCMON_16); gnlProkkaFHFOCMON_17 (original name was: gnl|Prokka|FHFOCMON_17); gnlProkkaFHFOCMON_18 (original name was: gnl|Prokka|FHFOCMON_18); gnlProkkaFHFOCMON_19 (original name was: gnl|Prokka|FHFOCMON_19); gnlProkkaFHFOCMON_20 (original name was: gnl|Prokka|FHFOCMON_20); gnlProkkaFHFOCMON_21 (original name was: gnl|Prokka|FHFOCMON_21); gnlProkkaFHFOCMON_22 (original name was: gnl|Prokka|FHFOCMON_22); gnlProkkaFHFOCMON_23 (original name was: gnl|Prokka|FHFOCMON_23); gnlProkkaFHFOCMON_24 (original name was: gnl|Prokka|FHFOCMON_24); gnlProkkaFHFOCMON_25 (original name was: gnl|Prokka|FHFOCMON_25); gnlProkkaFHFOCMON_26 (original name was: gnl|Prokka|FHFOCMON_26); gnlProkkaFHFOCMON_27 (original name was: gnl|Prokka|FHFOCMON_27); gnlProkkaFHFOCMON_28 (original name was: gnl|Prokka|FHFOCMON_28); gnlProkkaFHFOCMON_29 (original name was: gnl|Prokka|FHFOCMON_29); gnlProkkaFHFOCMON_30 (original name was: gnl|Prokka|FHFOCMON_30); gnlProkkaFHFOCMON_31 (original name was: gnl|Prokka|FHFOCMON_31); gnlProkkaFHFOCMON_32 (original name was: gnl|Prokka|FHFOCMON_32); gnlProkkaFHFOCMON_34 (original name was: gnl|Prokka|FHFOCMON_34); gnlProkkaFHFOCMON_35 (original name was: gnl|Prokka|FHFOCMON_35); gnlProkkaFHFOCMON_37 (original name was: gnl|Prokka|FHFOCMON_37); gnlProkkaFHFOCMON_38 (original name was: gnl|Prokka|FHFOCMON_38); gnlProkkaFHFOCMON_39 (original name was: gnl|Prokka|FHFOCMON_39); gnlProkkaFHFOCMON_40 (original name was: gnl|Prokka|FHFOCMON_40); gnlProkkaFHFOCMON_41 (original name was: gnl|Prokka|FHFOCMON_41); gnlProkkaFHFOCMON_42 (original name was: gnl|Prokka|FHFOCMON_42); gnlProkkaFHFOCMON_43 (original name was: gnl|Prokka|FHFOCMON_43); gnlProkkaFHFOCMON_44 (original name was: gnl|Prokka|FHFOCMON_44); gnlProkkaFHFOCMON_45 (original name was: gnl|Prokka|FHFOCMON_45); gnlProkkaFHFOCMON_46 (original name was: gnl|Prokka|FHFOCMON_46); gnlProkkaFHFOCMON_47 (original name was: gnl|Prokka|FHFOCMON_47); gnlProkkaFHFOCMON_48 (original name was: gnl|Prokka|FHFOCMON_48); gnlProkkaFHFOCMON_49 (original name was: gnl|Prokka|FHFOCMON_49)

Compact view

gnlProkkaFHFOCMON_15 - Region 1 - arylpolyene

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Location: 465,890 - 513,428 nt. (total: 47,539 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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Gene overview

NRPS/PKS domains

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

NRPS/PKS substrates

NRPS/PKS substrate predictions

ctg15_432

AMP-binding (59..293): X

nrpys: Asp, Asn, Glu, Gln, Aad

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: YMRMVITSSK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

gnlProkkaFHFOCMON_33 - Region 1 - RRE-containing

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Location: 334,776 - 350,821 nt. (total: 16,046 nt) Show pHMM detection rules used

Region on contig edge.

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaFHFOCMON_36 - Region 1 - RiPP-like

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Location: 90,276 - 102,450 nt. (total: 12,175 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.