GCA_034139065.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaJFNKMGDA_22 (original name was: gnl|Prokka|JFNKMGDA_22)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	arylpolyene	53,112	100,894	flexirubin	Other	48%

gnlProkkaJFNKMGDA_32 (original name was: gnl|Prokka|JFNKMGDA_32)

Region	Type	From	To	Most similar known cluster		Similarity
Region 32.1	RRE-containing	1,850	22,080

No secondary metabolite regions were found in these records:: gnlProkkaJFNKMGDA_1 (original name was: gnl|Prokka|JFNKMGDA_1); gnlProkkaJFNKMGDA_2 (original name was: gnl|Prokka|JFNKMGDA_2); gnlProkkaJFNKMGDA_3 (original name was: gnl|Prokka|JFNKMGDA_3); gnlProkkaJFNKMGDA_4 (original name was: gnl|Prokka|JFNKMGDA_4); gnlProkkaJFNKMGDA_5 (original name was: gnl|Prokka|JFNKMGDA_5); gnlProkkaJFNKMGDA_6 (original name was: gnl|Prokka|JFNKMGDA_6); gnlProkkaJFNKMGDA_7 (original name was: gnl|Prokka|JFNKMGDA_7); gnlProkkaJFNKMGDA_8 (original name was: gnl|Prokka|JFNKMGDA_8); gnlProkkaJFNKMGDA_9 (original name was: gnl|Prokka|JFNKMGDA_9); gnlProkkaJFNKMGDA_10 (original name was: gnl|Prokka|JFNKMGDA_10); gnlProkkaJFNKMGDA_11 (original name was: gnl|Prokka|JFNKMGDA_11); gnlProkkaJFNKMGDA_12 (original name was: gnl|Prokka|JFNKMGDA_12); gnlProkkaJFNKMGDA_13 (original name was: gnl|Prokka|JFNKMGDA_13); gnlProkkaJFNKMGDA_14 (original name was: gnl|Prokka|JFNKMGDA_14); gnlProkkaJFNKMGDA_15 (original name was: gnl|Prokka|JFNKMGDA_15); gnlProkkaJFNKMGDA_16 (original name was: gnl|Prokka|JFNKMGDA_16); gnlProkkaJFNKMGDA_17 (original name was: gnl|Prokka|JFNKMGDA_17); gnlProkkaJFNKMGDA_18 (original name was: gnl|Prokka|JFNKMGDA_18); gnlProkkaJFNKMGDA_19 (original name was: gnl|Prokka|JFNKMGDA_19); gnlProkkaJFNKMGDA_20 (original name was: gnl|Prokka|JFNKMGDA_20); gnlProkkaJFNKMGDA_21 (original name was: gnl|Prokka|JFNKMGDA_21); gnlProkkaJFNKMGDA_23 (original name was: gnl|Prokka|JFNKMGDA_23); gnlProkkaJFNKMGDA_24 (original name was: gnl|Prokka|JFNKMGDA_24); gnlProkkaJFNKMGDA_25 (original name was: gnl|Prokka|JFNKMGDA_25); gnlProkkaJFNKMGDA_26 (original name was: gnl|Prokka|JFNKMGDA_26); gnlProkkaJFNKMGDA_27 (original name was: gnl|Prokka|JFNKMGDA_27); gnlProkkaJFNKMGDA_28 (original name was: gnl|Prokka|JFNKMGDA_28); gnlProkkaJFNKMGDA_29 (original name was: gnl|Prokka|JFNKMGDA_29); gnlProkkaJFNKMGDA_30 (original name was: gnl|Prokka|JFNKMGDA_30); gnlProkkaJFNKMGDA_31 (original name was: gnl|Prokka|JFNKMGDA_31); gnlProkkaJFNKMGDA_33 (original name was: gnl|Prokka|JFNKMGDA_33); gnlProkkaJFNKMGDA_34 (original name was: gnl|Prokka|JFNKMGDA_34); gnlProkkaJFNKMGDA_35 (original name was: gnl|Prokka|JFNKMGDA_35); gnlProkkaJFNKMGDA_36 (original name was: gnl|Prokka|JFNKMGDA_36); gnlProkkaJFNKMGDA_37 (original name was: gnl|Prokka|JFNKMGDA_37); gnlProkkaJFNKMGDA_38 (original name was: gnl|Prokka|JFNKMGDA_38); gnlProkkaJFNKMGDA_39 (original name was: gnl|Prokka|JFNKMGDA_39); gnlProkkaJFNKMGDA_40 (original name was: gnl|Prokka|JFNKMGDA_40); gnlProkkaJFNKMGDA_41 (original name was: gnl|Prokka|JFNKMGDA_41); gnlProkkaJFNKMGDA_42 (original name was: gnl|Prokka|JFNKMGDA_42); gnlProkkaJFNKMGDA_43 (original name was: gnl|Prokka|JFNKMGDA_43); gnlProkkaJFNKMGDA_44 (original name was: gnl|Prokka|JFNKMGDA_44); gnlProkkaJFNKMGDA_45 (original name was: gnl|Prokka|JFNKMGDA_45); gnlProkkaJFNKMGDA_46 (original name was: gnl|Prokka|JFNKMGDA_46); gnlProkkaJFNKMGDA_47 (original name was: gnl|Prokka|JFNKMGDA_47); gnlProkkaJFNKMGDA_48 (original name was: gnl|Prokka|JFNKMGDA_48); gnlProkkaJFNKMGDA_49 (original name was: gnl|Prokka|JFNKMGDA_49); gnlProkkaJFNKMGDA_50 (original name was: gnl|Prokka|JFNKMGDA_50); gnlProkkaJFNKMGDA_51 (original name was: gnl|Prokka|JFNKMGDA_51); gnlProkkaJFNKMGDA_52 (original name was: gnl|Prokka|JFNKMGDA_52); gnlProkkaJFNKMGDA_53 (original name was: gnl|Prokka|JFNKMGDA_53); gnlProkkaJFNKMGDA_54 (original name was: gnl|Prokka|JFNKMGDA_54); gnlProkkaJFNKMGDA_55 (original name was: gnl|Prokka|JFNKMGDA_55); gnlProkkaJFNKMGDA_56 (original name was: gnl|Prokka|JFNKMGDA_56); gnlProkkaJFNKMGDA_57 (original name was: gnl|Prokka|JFNKMGDA_57); gnlProkkaJFNKMGDA_58 (original name was: gnl|Prokka|JFNKMGDA_58); gnlProkkaJFNKMGDA_59 (original name was: gnl|Prokka|JFNKMGDA_59); gnlProkkaJFNKMGDA_60 (original name was: gnl|Prokka|JFNKMGDA_60); gnlProkkaJFNKMGDA_61 (original name was: gnl|Prokka|JFNKMGDA_61); gnlProkkaJFNKMGDA_62 (original name was: gnl|Prokka|JFNKMGDA_62); gnlProkkaJFNKMGDA_63 (original name was: gnl|Prokka|JFNKMGDA_63); gnlProkkaJFNKMGDA_64 (original name was: gnl|Prokka|JFNKMGDA_64); gnlProkkaJFNKMGDA_65 (original name was: gnl|Prokka|JFNKMGDA_65)

Compact view

gnlProkkaJFNKMGDA_22 - Region 1 - arylpolyene

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Location: 53,112 - 100,894 nt. (total: 47,783 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

NRPS/PKS substrates

NRPS/PKS substrate predictions

ctg22_63

AMP-binding (56..290): X

nrpys: Asp, Asn, Glu, Gln, Aad

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: YMRMIITSSK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

gnlProkkaJFNKMGDA_32 - Region 1 - RRE-containing

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Location: 1,850 - 22,080 nt. (total: 20,231 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.