GCA_034139765.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaADIJIICD_44 (original name was: gnl|Prokka|ADIJIICD_44)

Region	Type	From	To	Most similar known cluster		Similarity
Region 44.1	phosphonate	53,400	66,959	polysaccharide B	Saccharide	13%

gnlProkkaADIJIICD_81 (original name was: gnl|Prokka|ADIJIICD_81)

Region	Type	From	To	Most similar known cluster		Similarity
Region 81.1	NRPS-like	29,347	71,776

gnlProkkaADIJIICD_84 (original name was: gnl|Prokka|ADIJIICD_84)

Region	Type	From	To	Most similar known cluster		Similarity
Region 84.1	RRE-containing	28,324	40,716	polysaccharide C	Saccharide	16%

No secondary metabolite regions were found in these records:: gnlProkkaADIJIICD_1 (original name was: gnl|Prokka|ADIJIICD_1); gnlProkkaADIJIICD_2 (original name was: gnl|Prokka|ADIJIICD_2); gnlProkkaADIJIICD_3 (original name was: gnl|Prokka|ADIJIICD_3); gnlProkkaADIJIICD_4 (original name was: gnl|Prokka|ADIJIICD_4); gnlProkkaADIJIICD_5 (original name was: gnl|Prokka|ADIJIICD_5); gnlProkkaADIJIICD_6 (original name was: gnl|Prokka|ADIJIICD_6); gnlProkkaADIJIICD_7 (original name was: gnl|Prokka|ADIJIICD_7); gnlProkkaADIJIICD_8 (original name was: gnl|Prokka|ADIJIICD_8); gnlProkkaADIJIICD_9 (original name was: gnl|Prokka|ADIJIICD_9); gnlProkkaADIJIICD_10 (original name was: gnl|Prokka|ADIJIICD_10); gnlProkkaADIJIICD_11 (original name was: gnl|Prokka|ADIJIICD_11); gnlProkkaADIJIICD_12 (original name was: gnl|Prokka|ADIJIICD_12); gnlProkkaADIJIICD_13 (original name was: gnl|Prokka|ADIJIICD_13); gnlProkkaADIJIICD_14 (original name was: gnl|Prokka|ADIJIICD_14); gnlProkkaADIJIICD_15 (original name was: gnl|Prokka|ADIJIICD_15); gnlProkkaADIJIICD_16 (original name was: gnl|Prokka|ADIJIICD_16); gnlProkkaADIJIICD_17 (original name was: gnl|Prokka|ADIJIICD_17); gnlProkkaADIJIICD_18 (original name was: gnl|Prokka|ADIJIICD_18); gnlProkkaADIJIICD_19 (original name was: gnl|Prokka|ADIJIICD_19); gnlProkkaADIJIICD_20 (original name was: gnl|Prokka|ADIJIICD_20); gnlProkkaADIJIICD_21 (original name was: gnl|Prokka|ADIJIICD_21); gnlProkkaADIJIICD_22 (original name was: gnl|Prokka|ADIJIICD_22); gnlProkkaADIJIICD_23 (original name was: gnl|Prokka|ADIJIICD_23); gnlProkkaADIJIICD_24 (original name was: gnl|Prokka|ADIJIICD_24); gnlProkkaADIJIICD_25 (original name was: gnl|Prokka|ADIJIICD_25); gnlProkkaADIJIICD_26 (original name was: gnl|Prokka|ADIJIICD_26); gnlProkkaADIJIICD_27 (original name was: gnl|Prokka|ADIJIICD_27); gnlProkkaADIJIICD_28 (original name was: gnl|Prokka|ADIJIICD_28); gnlProkkaADIJIICD_29 (original name was: gnl|Prokka|ADIJIICD_29); gnlProkkaADIJIICD_30 (original name was: gnl|Prokka|ADIJIICD_30); gnlProkkaADIJIICD_31 (original name was: gnl|Prokka|ADIJIICD_31); gnlProkkaADIJIICD_32 (original name was: gnl|Prokka|ADIJIICD_32); gnlProkkaADIJIICD_33 (original name was: gnl|Prokka|ADIJIICD_33); gnlProkkaADIJIICD_34 (original name was: gnl|Prokka|ADIJIICD_34); gnlProkkaADIJIICD_35 (original name was: gnl|Prokka|ADIJIICD_35); gnlProkkaADIJIICD_36 (original name was: gnl|Prokka|ADIJIICD_36); gnlProkkaADIJIICD_37 (original name was: gnl|Prokka|ADIJIICD_37); gnlProkkaADIJIICD_38 (original name was: gnl|Prokka|ADIJIICD_38); gnlProkkaADIJIICD_39 (original name was: gnl|Prokka|ADIJIICD_39); gnlProkkaADIJIICD_40 (original name was: gnl|Prokka|ADIJIICD_40); gnlProkkaADIJIICD_41 (original name was: gnl|Prokka|ADIJIICD_41); gnlProkkaADIJIICD_42 (original name was: gnl|Prokka|ADIJIICD_42); gnlProkkaADIJIICD_43 (original name was: gnl|Prokka|ADIJIICD_43); gnlProkkaADIJIICD_45 (original name was: gnl|Prokka|ADIJIICD_45); gnlProkkaADIJIICD_46 (original name was: gnl|Prokka|ADIJIICD_46); gnlProkkaADIJIICD_47 (original name was: gnl|Prokka|ADIJIICD_47); gnlProkkaADIJIICD_48 (original name was: gnl|Prokka|ADIJIICD_48); gnlProkkaADIJIICD_49 (original name was: gnl|Prokka|ADIJIICD_49); gnlProkkaADIJIICD_50 (original name was: gnl|Prokka|ADIJIICD_50); gnlProkkaADIJIICD_51 (original name was: gnl|Prokka|ADIJIICD_51); gnlProkkaADIJIICD_52 (original name was: gnl|Prokka|ADIJIICD_52); gnlProkkaADIJIICD_53 (original name was: gnl|Prokka|ADIJIICD_53); gnlProkkaADIJIICD_54 (original name was: gnl|Prokka|ADIJIICD_54); gnlProkkaADIJIICD_55 (original name was: gnl|Prokka|ADIJIICD_55); gnlProkkaADIJIICD_56 (original name was: gnl|Prokka|ADIJIICD_56); gnlProkkaADIJIICD_57 (original name was: gnl|Prokka|ADIJIICD_57); gnlProkkaADIJIICD_58 (original name was: gnl|Prokka|ADIJIICD_58); gnlProkkaADIJIICD_59 (original name was: gnl|Prokka|ADIJIICD_59); gnlProkkaADIJIICD_60 (original name was: gnl|Prokka|ADIJIICD_60); gnlProkkaADIJIICD_61 (original name was: gnl|Prokka|ADIJIICD_61); gnlProkkaADIJIICD_62 (original name was: gnl|Prokka|ADIJIICD_62); gnlProkkaADIJIICD_63 (original name was: gnl|Prokka|ADIJIICD_63); gnlProkkaADIJIICD_64 (original name was: gnl|Prokka|ADIJIICD_64); gnlProkkaADIJIICD_65 (original name was: gnl|Prokka|ADIJIICD_65); gnlProkkaADIJIICD_66 (original name was: gnl|Prokka|ADIJIICD_66); gnlProkkaADIJIICD_67 (original name was: gnl|Prokka|ADIJIICD_67); gnlProkkaADIJIICD_68 (original name was: gnl|Prokka|ADIJIICD_68); gnlProkkaADIJIICD_69 (original name was: gnl|Prokka|ADIJIICD_69); gnlProkkaADIJIICD_70 (original name was: gnl|Prokka|ADIJIICD_70); gnlProkkaADIJIICD_71 (original name was: gnl|Prokka|ADIJIICD_71); gnlProkkaADIJIICD_72 (original name was: gnl|Prokka|ADIJIICD_72); gnlProkkaADIJIICD_73 (original name was: gnl|Prokka|ADIJIICD_73); gnlProkkaADIJIICD_74 (original name was: gnl|Prokka|ADIJIICD_74); gnlProkkaADIJIICD_75 (original name was: gnl|Prokka|ADIJIICD_75); gnlProkkaADIJIICD_76 (original name was: gnl|Prokka|ADIJIICD_76); gnlProkkaADIJIICD_77 (original name was: gnl|Prokka|ADIJIICD_77); gnlProkkaADIJIICD_78 (original name was: gnl|Prokka|ADIJIICD_78); gnlProkkaADIJIICD_79 (original name was: gnl|Prokka|ADIJIICD_79); gnlProkkaADIJIICD_80 (original name was: gnl|Prokka|ADIJIICD_80); gnlProkkaADIJIICD_82 (original name was: gnl|Prokka|ADIJIICD_82); gnlProkkaADIJIICD_83 (original name was: gnl|Prokka|ADIJIICD_83); gnlProkkaADIJIICD_85 (original name was: gnl|Prokka|ADIJIICD_85); gnlProkkaADIJIICD_86 (original name was: gnl|Prokka|ADIJIICD_86); gnlProkkaADIJIICD_87 (original name was: gnl|Prokka|ADIJIICD_87); gnlProkkaADIJIICD_88 (original name was: gnl|Prokka|ADIJIICD_88); gnlProkkaADIJIICD_89 (original name was: gnl|Prokka|ADIJIICD_89); gnlProkkaADIJIICD_90 (original name was: gnl|Prokka|ADIJIICD_90); gnlProkkaADIJIICD_91 (original name was: gnl|Prokka|ADIJIICD_91); gnlProkkaADIJIICD_92 (original name was: gnl|Prokka|ADIJIICD_92); gnlProkkaADIJIICD_93 (original name was: gnl|Prokka|ADIJIICD_93); gnlProkkaADIJIICD_94 (original name was: gnl|Prokka|ADIJIICD_94); gnlProkkaADIJIICD_95 (original name was: gnl|Prokka|ADIJIICD_95); gnlProkkaADIJIICD_96 (original name was: gnl|Prokka|ADIJIICD_96)

Compact view

gnlProkkaADIJIICD_44 - Region 1 - phosphonate

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Location: 53,400 - 66,959 nt. (total: 13,560 nt) Show pHMM detection rules used

Region on contig edge.

phosphonate: (phosphonates and minimum(1, [2-Hacid_dh_C, Aldedh, Aminotran_1_2, Aminotran_5, AurF, CTP_transf_like, DUF4992, Fe-ADH, HMGL-like, Metallophos_2, NTP_transf_3, NTP_transf_5, PALP, PEP_mutase, TPP_enzyme_C, TPP_enzyme_N, phosphonates]) and not (phosphonatesHydrolase or phosphonatesMeIsocitrateLyase))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaADIJIICD_81 - Region 1 - NRPS-like

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Location: 29,347 - 71,776 nt. (total: 42,430 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS substrates

Predicted core structure(s)

For candidate cluster 1, location 29346 - 71776:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS substrate predictions

ctg81_43

AMP-binding (12..401): X

nrpys: Ile, Leu

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
Small clusters prediction:: Aliphatic, branched hydrophobic (Val, Leu, Ile, Abu, Ival)
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DALFLGVVLK
Nearest Stachelhaus code(s):: Leu or Ile DAIYLGVVLK (59% 8Å match); aIle DALVFGVVLK (56% 8Å match)
Stachelhaus code match:: 80% (moderate)

gnlProkkaADIJIICD_84 - Region 1 - RRE-containing

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Location: 28,324 - 40,716 nt. (total: 12,393 nt) Show pHMM detection rules used

Region on contig edge.

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1