GCA_034143585.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaHEBNBDMG_11 (original name was: gnl|Prokka|HEBNBDMG_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	NRPS-like	1	19,233

gnlProkkaHEBNBDMG_18 (original name was: gnl|Prokka|HEBNBDMG_18)

Region	Type	From	To	Most similar known cluster		Similarity
Region 18.1	phosphonate	406,659	420,923	polysaccharide B	Saccharide	43%

gnlProkkaHEBNBDMG_21 (original name was: gnl|Prokka|HEBNBDMG_21)

Region	Type	From	To	Most similar known cluster		Similarity
Region 21.1	RRE-containing	94,811	115,164	polysaccharide C	Saccharide	16%

gnlProkkaHEBNBDMG_44 (original name was: gnl|Prokka|HEBNBDMG_44)

Region	Type	From	To	Most similar known cluster		Similarity
Region 44.1	lanthipeptide-class-i	12,128	45,500

Region	Type	From	To	Most similar known cluster	Similarity
Region 11.1	NRPS-like	1	19,233
Region 18.1	phosphonate	406,659	420,923	polysaccharide B	Saccharide	43%
Region 21.1	RRE-containing	94,811	115,164	polysaccharide C	Saccharide	16%
Region 44.1	lanthipeptide-class-i	12,128	45,500

No secondary metabolite regions were found in these records:: gnlProkkaHEBNBDMG_1 (original name was: gnl|Prokka|HEBNBDMG_1); gnlProkkaHEBNBDMG_2 (original name was: gnl|Prokka|HEBNBDMG_2); gnlProkkaHEBNBDMG_3 (original name was: gnl|Prokka|HEBNBDMG_3); gnlProkkaHEBNBDMG_4 (original name was: gnl|Prokka|HEBNBDMG_4); gnlProkkaHEBNBDMG_5 (original name was: gnl|Prokka|HEBNBDMG_5); gnlProkkaHEBNBDMG_6 (original name was: gnl|Prokka|HEBNBDMG_6); gnlProkkaHEBNBDMG_7 (original name was: gnl|Prokka|HEBNBDMG_7); gnlProkkaHEBNBDMG_8 (original name was: gnl|Prokka|HEBNBDMG_8); gnlProkkaHEBNBDMG_9 (original name was: gnl|Prokka|HEBNBDMG_9); gnlProkkaHEBNBDMG_10 (original name was: gnl|Prokka|HEBNBDMG_10); gnlProkkaHEBNBDMG_12 (original name was: gnl|Prokka|HEBNBDMG_12); gnlProkkaHEBNBDMG_13 (original name was: gnl|Prokka|HEBNBDMG_13); gnlProkkaHEBNBDMG_14 (original name was: gnl|Prokka|HEBNBDMG_14); gnlProkkaHEBNBDMG_15 (original name was: gnl|Prokka|HEBNBDMG_15); gnlProkkaHEBNBDMG_16 (original name was: gnl|Prokka|HEBNBDMG_16); gnlProkkaHEBNBDMG_17 (original name was: gnl|Prokka|HEBNBDMG_17); gnlProkkaHEBNBDMG_19 (original name was: gnl|Prokka|HEBNBDMG_19); gnlProkkaHEBNBDMG_20 (original name was: gnl|Prokka|HEBNBDMG_20); gnlProkkaHEBNBDMG_22 (original name was: gnl|Prokka|HEBNBDMG_22); gnlProkkaHEBNBDMG_23 (original name was: gnl|Prokka|HEBNBDMG_23); gnlProkkaHEBNBDMG_24 (original name was: gnl|Prokka|HEBNBDMG_24); gnlProkkaHEBNBDMG_25 (original name was: gnl|Prokka|HEBNBDMG_25); gnlProkkaHEBNBDMG_26 (original name was: gnl|Prokka|HEBNBDMG_26); gnlProkkaHEBNBDMG_27 (original name was: gnl|Prokka|HEBNBDMG_27); gnlProkkaHEBNBDMG_28 (original name was: gnl|Prokka|HEBNBDMG_28); gnlProkkaHEBNBDMG_29 (original name was: gnl|Prokka|HEBNBDMG_29); gnlProkkaHEBNBDMG_30 (original name was: gnl|Prokka|HEBNBDMG_30); gnlProkkaHEBNBDMG_31 (original name was: gnl|Prokka|HEBNBDMG_31); gnlProkkaHEBNBDMG_32 (original name was: gnl|Prokka|HEBNBDMG_32); gnlProkkaHEBNBDMG_33 (original name was: gnl|Prokka|HEBNBDMG_33); gnlProkkaHEBNBDMG_34 (original name was: gnl|Prokka|HEBNBDMG_34); gnlProkkaHEBNBDMG_35 (original name was: gnl|Prokka|HEBNBDMG_35); gnlProkkaHEBNBDMG_36 (original name was: gnl|Prokka|HEBNBDMG_36); gnlProkkaHEBNBDMG_37 (original name was: gnl|Prokka|HEBNBDMG_37); gnlProkkaHEBNBDMG_38 (original name was: gnl|Prokka|HEBNBDMG_38); gnlProkkaHEBNBDMG_39 (original name was: gnl|Prokka|HEBNBDMG_39); gnlProkkaHEBNBDMG_40 (original name was: gnl|Prokka|HEBNBDMG_40); gnlProkkaHEBNBDMG_41 (original name was: gnl|Prokka|HEBNBDMG_41); gnlProkkaHEBNBDMG_42 (original name was: gnl|Prokka|HEBNBDMG_42); gnlProkkaHEBNBDMG_43 (original name was: gnl|Prokka|HEBNBDMG_43); gnlProkkaHEBNBDMG_45 (original name was: gnl|Prokka|HEBNBDMG_45); gnlProkkaHEBNBDMG_46 (original name was: gnl|Prokka|HEBNBDMG_46); gnlProkkaHEBNBDMG_47 (original name was: gnl|Prokka|HEBNBDMG_47); gnlProkkaHEBNBDMG_48 (original name was: gnl|Prokka|HEBNBDMG_48); gnlProkkaHEBNBDMG_49 (original name was: gnl|Prokka|HEBNBDMG_49); gnlProkkaHEBNBDMG_50 (original name was: gnl|Prokka|HEBNBDMG_50); gnlProkkaHEBNBDMG_51 (original name was: gnl|Prokka|HEBNBDMG_51); gnlProkkaHEBNBDMG_52 (original name was: gnl|Prokka|HEBNBDMG_52); gnlProkkaHEBNBDMG_53 (original name was: gnl|Prokka|HEBNBDMG_53); gnlProkkaHEBNBDMG_54 (original name was: gnl|Prokka|HEBNBDMG_54); gnlProkkaHEBNBDMG_55 (original name was: gnl|Prokka|HEBNBDMG_55); gnlProkkaHEBNBDMG_56 (original name was: gnl|Prokka|HEBNBDMG_56); gnlProkkaHEBNBDMG_57 (original name was: gnl|Prokka|HEBNBDMG_57); gnlProkkaHEBNBDMG_58 (original name was: gnl|Prokka|HEBNBDMG_58); gnlProkkaHEBNBDMG_59 (original name was: gnl|Prokka|HEBNBDMG_59); gnlProkkaHEBNBDMG_60 (original name was: gnl|Prokka|HEBNBDMG_60); gnlProkkaHEBNBDMG_61 (original name was: gnl|Prokka|HEBNBDMG_61); gnlProkkaHEBNBDMG_62 (original name was: gnl|Prokka|HEBNBDMG_62); gnlProkkaHEBNBDMG_63 (original name was: gnl|Prokka|HEBNBDMG_63); gnlProkkaHEBNBDMG_64 (original name was: gnl|Prokka|HEBNBDMG_64); gnlProkkaHEBNBDMG_65 (original name was: gnl|Prokka|HEBNBDMG_65); gnlProkkaHEBNBDMG_66 (original name was: gnl|Prokka|HEBNBDMG_66); gnlProkkaHEBNBDMG_67 (original name was: gnl|Prokka|HEBNBDMG_67); gnlProkkaHEBNBDMG_68 (original name was: gnl|Prokka|HEBNBDMG_68); gnlProkkaHEBNBDMG_69 (original name was: gnl|Prokka|HEBNBDMG_69); gnlProkkaHEBNBDMG_70 (original name was: gnl|Prokka|HEBNBDMG_70); gnlProkkaHEBNBDMG_71 (original name was: gnl|Prokka|HEBNBDMG_71); gnlProkkaHEBNBDMG_72 (original name was: gnl|Prokka|HEBNBDMG_72); gnlProkkaHEBNBDMG_73 (original name was: gnl|Prokka|HEBNBDMG_73); gnlProkkaHEBNBDMG_74 (original name was: gnl|Prokka|HEBNBDMG_74); gnlProkkaHEBNBDMG_75 (original name was: gnl|Prokka|HEBNBDMG_75); gnlProkkaHEBNBDMG_76 (original name was: gnl|Prokka|HEBNBDMG_76); gnlProkkaHEBNBDMG_77 (original name was: gnl|Prokka|HEBNBDMG_77); gnlProkkaHEBNBDMG_78 (original name was: gnl|Prokka|HEBNBDMG_78); gnlProkkaHEBNBDMG_79 (original name was: gnl|Prokka|HEBNBDMG_79); gnlProkkaHEBNBDMG_80 (original name was: gnl|Prokka|HEBNBDMG_80); gnlProkkaHEBNBDMG_81 (original name was: gnl|Prokka|HEBNBDMG_81); gnlProkkaHEBNBDMG_82 (original name was: gnl|Prokka|HEBNBDMG_82); gnlProkkaHEBNBDMG_83 (original name was: gnl|Prokka|HEBNBDMG_83); gnlProkkaHEBNBDMG_84 (original name was: gnl|Prokka|HEBNBDMG_84); gnlProkkaHEBNBDMG_85 (original name was: gnl|Prokka|HEBNBDMG_85); gnlProkkaHEBNBDMG_86 (original name was: gnl|Prokka|HEBNBDMG_86); gnlProkkaHEBNBDMG_87 (original name was: gnl|Prokka|HEBNBDMG_87); gnlProkkaHEBNBDMG_88 (original name was: gnl|Prokka|HEBNBDMG_88); gnlProkkaHEBNBDMG_89 (original name was: gnl|Prokka|HEBNBDMG_89); gnlProkkaHEBNBDMG_90 (original name was: gnl|Prokka|HEBNBDMG_90); gnlProkkaHEBNBDMG_91 (original name was: gnl|Prokka|HEBNBDMG_91); gnlProkkaHEBNBDMG_92 (original name was: gnl|Prokka|HEBNBDMG_92); gnlProkkaHEBNBDMG_93 (original name was: gnl|Prokka|HEBNBDMG_93); gnlProkkaHEBNBDMG_94 (original name was: gnl|Prokka|HEBNBDMG_94); gnlProkkaHEBNBDMG_95 (original name was: gnl|Prokka|HEBNBDMG_95); gnlProkkaHEBNBDMG_96 (original name was: gnl|Prokka|HEBNBDMG_96); gnlProkkaHEBNBDMG_97 (original name was: gnl|Prokka|HEBNBDMG_97); gnlProkkaHEBNBDMG_98 (original name was: gnl|Prokka|HEBNBDMG_98); gnlProkkaHEBNBDMG_99 (original name was: gnl|Prokka|HEBNBDMG_99); gnlProkkaHEBNBDMG_100 (original name was: gnl|Prokka|HEBNBDMG_100); gnlProkkaHEBNBDMG_101 (original name was: gnl|Prokka|HEBNBDMG_101); gnlProkkaHEBNBDMG_102 (original name was: gnl|Prokka|HEBNBDMG_102); gnlProkkaHEBNBDMG_103 (original name was: gnl|Prokka|HEBNBDMG_103); gnlProkkaHEBNBDMG_104 (original name was: gnl|Prokka|HEBNBDMG_104); gnlProkkaHEBNBDMG_105 (original name was: gnl|Prokka|HEBNBDMG_105); gnlProkkaHEBNBDMG_106 (original name was: gnl|Prokka|HEBNBDMG_106); gnlProkkaHEBNBDMG_107 (original name was: gnl|Prokka|HEBNBDMG_107); gnlProkkaHEBNBDMG_108 (original name was: gnl|Prokka|HEBNBDMG_108); gnlProkkaHEBNBDMG_109 (original name was: gnl|Prokka|HEBNBDMG_109); gnlProkkaHEBNBDMG_110 (original name was: gnl|Prokka|HEBNBDMG_110); gnlProkkaHEBNBDMG_111 (original name was: gnl|Prokka|HEBNBDMG_111); gnlProkkaHEBNBDMG_112 (original name was: gnl|Prokka|HEBNBDMG_112)

Compact view

gnlProkkaHEBNBDMG_11 - Region 1 - NRPS-like

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Location: 1 - 19,233 nt. (total: 19,233 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS substrates

Predicted core structure(s)

For candidate cluster 1, location 0 - 19233:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS substrate predictions

ctg11_12

AMP-binding (12..401): X

nrpys: Leu, Ile

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
Small clusters prediction:: Aliphatic, branched hydrophobic (Val, Leu, Ile, Abu, Ival)
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DALFLGVVLK
Nearest Stachelhaus code(s):: Leu or Ile DAIYLGVVLK (59% 8Å match); aIle DALVFGVVLK (56% 8Å match)
Stachelhaus code match:: 80% (moderate)

gnlProkkaHEBNBDMG_18 - Region 1 - phosphonate

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Location: 406,659 - 420,923 nt. (total: 14,265 nt) Show pHMM detection rules used

Region on contig edge.

phosphonate: (phosphonates and minimum(1, [2-Hacid_dh_C, Aldedh, Aminotran_1_2, Aminotran_5, AurF, CTP_transf_like, DUF4992, Fe-ADH, HMGL-like, Metallophos_2, NTP_transf_3, NTP_transf_5, PALP, PEP_mutase, TPP_enzyme_C, TPP_enzyme_N, phosphonates]) and not (phosphonatesHydrolase or phosphonatesMeIsocitrateLyase))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaHEBNBDMG_21 - Region 1 - RRE-containing

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Location: 94,811 - 115,164 nt. (total: 20,354 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaHEBNBDMG_44 - Region 1 - lanthipeptide-class-i

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Location: 12,128 - 45,500 nt. (total: 33,373 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-i: ((LANC_like and (Lant_dehydr_N or Lant_dehydr_C)) and not (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.