GCA_034144515.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaCBPNCJJM_27 (original name was: gnl|Prokka|CBPNCJJM_27)

Region	Type	From	To	Most similar known cluster		Similarity
Region 27.1	RRE-containing	1	10,420

gnlProkkaCBPNCJJM_46 (original name was: gnl|Prokka|CBPNCJJM_46)

Region	Type	From	To	Most similar known cluster		Similarity
Region 46.1	RRE-containing	19,751	41,196
Region 46.2	arylpolyene	128,936	176,541	flexirubin	Other	48%

Region	Type	From	To	Most similar known cluster	Similarity
Region 27.1	RRE-containing	1	10,420
Region 46.1	RRE-containing	19,751	41,196
Region 46.2	arylpolyene	128,936	176,541	flexirubin	Other	48%

No secondary metabolite regions were found in these records:: gnlProkkaCBPNCJJM_1 (original name was: gnl|Prokka|CBPNCJJM_1); gnlProkkaCBPNCJJM_2 (original name was: gnl|Prokka|CBPNCJJM_2); gnlProkkaCBPNCJJM_3 (original name was: gnl|Prokka|CBPNCJJM_3); gnlProkkaCBPNCJJM_4 (original name was: gnl|Prokka|CBPNCJJM_4); gnlProkkaCBPNCJJM_5 (original name was: gnl|Prokka|CBPNCJJM_5); gnlProkkaCBPNCJJM_6 (original name was: gnl|Prokka|CBPNCJJM_6); gnlProkkaCBPNCJJM_7 (original name was: gnl|Prokka|CBPNCJJM_7); gnlProkkaCBPNCJJM_8 (original name was: gnl|Prokka|CBPNCJJM_8); gnlProkkaCBPNCJJM_9 (original name was: gnl|Prokka|CBPNCJJM_9); gnlProkkaCBPNCJJM_10 (original name was: gnl|Prokka|CBPNCJJM_10); gnlProkkaCBPNCJJM_11 (original name was: gnl|Prokka|CBPNCJJM_11); gnlProkkaCBPNCJJM_12 (original name was: gnl|Prokka|CBPNCJJM_12); gnlProkkaCBPNCJJM_13 (original name was: gnl|Prokka|CBPNCJJM_13); gnlProkkaCBPNCJJM_14 (original name was: gnl|Prokka|CBPNCJJM_14); gnlProkkaCBPNCJJM_15 (original name was: gnl|Prokka|CBPNCJJM_15); gnlProkkaCBPNCJJM_16 (original name was: gnl|Prokka|CBPNCJJM_16); gnlProkkaCBPNCJJM_17 (original name was: gnl|Prokka|CBPNCJJM_17); gnlProkkaCBPNCJJM_18 (original name was: gnl|Prokka|CBPNCJJM_18); gnlProkkaCBPNCJJM_19 (original name was: gnl|Prokka|CBPNCJJM_19); gnlProkkaCBPNCJJM_20 (original name was: gnl|Prokka|CBPNCJJM_20); gnlProkkaCBPNCJJM_21 (original name was: gnl|Prokka|CBPNCJJM_21); gnlProkkaCBPNCJJM_22 (original name was: gnl|Prokka|CBPNCJJM_22); gnlProkkaCBPNCJJM_23 (original name was: gnl|Prokka|CBPNCJJM_23); gnlProkkaCBPNCJJM_24 (original name was: gnl|Prokka|CBPNCJJM_24); gnlProkkaCBPNCJJM_25 (original name was: gnl|Prokka|CBPNCJJM_25); gnlProkkaCBPNCJJM_26 (original name was: gnl|Prokka|CBPNCJJM_26); gnlProkkaCBPNCJJM_28 (original name was: gnl|Prokka|CBPNCJJM_28); gnlProkkaCBPNCJJM_29 (original name was: gnl|Prokka|CBPNCJJM_29); gnlProkkaCBPNCJJM_30 (original name was: gnl|Prokka|CBPNCJJM_30); gnlProkkaCBPNCJJM_31 (original name was: gnl|Prokka|CBPNCJJM_31); gnlProkkaCBPNCJJM_32 (original name was: gnl|Prokka|CBPNCJJM_32); gnlProkkaCBPNCJJM_33 (original name was: gnl|Prokka|CBPNCJJM_33); gnlProkkaCBPNCJJM_34 (original name was: gnl|Prokka|CBPNCJJM_34); gnlProkkaCBPNCJJM_35 (original name was: gnl|Prokka|CBPNCJJM_35); gnlProkkaCBPNCJJM_36 (original name was: gnl|Prokka|CBPNCJJM_36); gnlProkkaCBPNCJJM_37 (original name was: gnl|Prokka|CBPNCJJM_37); gnlProkkaCBPNCJJM_38 (original name was: gnl|Prokka|CBPNCJJM_38); gnlProkkaCBPNCJJM_39 (original name was: gnl|Prokka|CBPNCJJM_39); gnlProkkaCBPNCJJM_40 (original name was: gnl|Prokka|CBPNCJJM_40); gnlProkkaCBPNCJJM_41 (original name was: gnl|Prokka|CBPNCJJM_41); gnlProkkaCBPNCJJM_42 (original name was: gnl|Prokka|CBPNCJJM_42); gnlProkkaCBPNCJJM_43 (original name was: gnl|Prokka|CBPNCJJM_43); gnlProkkaCBPNCJJM_44 (original name was: gnl|Prokka|CBPNCJJM_44); gnlProkkaCBPNCJJM_45 (original name was: gnl|Prokka|CBPNCJJM_45); gnlProkkaCBPNCJJM_47 (original name was: gnl|Prokka|CBPNCJJM_47); gnlProkkaCBPNCJJM_48 (original name was: gnl|Prokka|CBPNCJJM_48); gnlProkkaCBPNCJJM_49 (original name was: gnl|Prokka|CBPNCJJM_49); gnlProkkaCBPNCJJM_50 (original name was: gnl|Prokka|CBPNCJJM_50); gnlProkkaCBPNCJJM_51 (original name was: gnl|Prokka|CBPNCJJM_51); gnlProkkaCBPNCJJM_52 (original name was: gnl|Prokka|CBPNCJJM_52); gnlProkkaCBPNCJJM_53 (original name was: gnl|Prokka|CBPNCJJM_53)

Compact view

gnlProkkaCBPNCJJM_27 - Region 1 - RRE-containing

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Location: 1 - 10,420 nt. (total: 10,420 nt) Show pHMM detection rules used

Region on contig edge.

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaCBPNCJJM_46 - Region 1 - RRE-containing

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Location: 19,751 - 41,196 nt. (total: 21,446 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaCBPNCJJM_46 - Region 2 - arylpolyene

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Location: 128,936 - 176,541 nt. (total: 47,606 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

NRPS/PKS substrates

NRPS/PKS substrate predictions

ctg46_137

AMP-binding (46..308): X

nrpys: Asp, Asn, Glu, Gln, Aad

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: YMRMIITSSK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)