GCA_034146305.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaENANELEA_10 (original name was: gnl|Prokka|ENANELEA_10)

Region	Type	From	To	Most similar known cluster		Similarity
Region 10.1	RRE-containing	1	10,420

gnlProkkaENANELEA_48 (original name was: gnl|Prokka|ENANELEA_48)

Region	Type	From	To	Most similar known cluster		Similarity
Region 48.1	arylpolyene	15,296	62,901	flexirubin	Other	48%

Region	Type	From	To	Most similar known cluster	Similarity
Region 10.1	RRE-containing	1	10,420
Region 48.1	arylpolyene	15,296	62,901	flexirubin	Other	48%

No secondary metabolite regions were found in these records:: gnlProkkaENANELEA_1 (original name was: gnl|Prokka|ENANELEA_1); gnlProkkaENANELEA_2 (original name was: gnl|Prokka|ENANELEA_2); gnlProkkaENANELEA_3 (original name was: gnl|Prokka|ENANELEA_3); gnlProkkaENANELEA_4 (original name was: gnl|Prokka|ENANELEA_4); gnlProkkaENANELEA_5 (original name was: gnl|Prokka|ENANELEA_5); gnlProkkaENANELEA_6 (original name was: gnl|Prokka|ENANELEA_6); gnlProkkaENANELEA_7 (original name was: gnl|Prokka|ENANELEA_7); gnlProkkaENANELEA_8 (original name was: gnl|Prokka|ENANELEA_8); gnlProkkaENANELEA_9 (original name was: gnl|Prokka|ENANELEA_9); gnlProkkaENANELEA_11 (original name was: gnl|Prokka|ENANELEA_11); gnlProkkaENANELEA_12 (original name was: gnl|Prokka|ENANELEA_12); gnlProkkaENANELEA_13 (original name was: gnl|Prokka|ENANELEA_13); gnlProkkaENANELEA_14 (original name was: gnl|Prokka|ENANELEA_14); gnlProkkaENANELEA_15 (original name was: gnl|Prokka|ENANELEA_15); gnlProkkaENANELEA_16 (original name was: gnl|Prokka|ENANELEA_16); gnlProkkaENANELEA_17 (original name was: gnl|Prokka|ENANELEA_17); gnlProkkaENANELEA_18 (original name was: gnl|Prokka|ENANELEA_18); gnlProkkaENANELEA_19 (original name was: gnl|Prokka|ENANELEA_19); gnlProkkaENANELEA_20 (original name was: gnl|Prokka|ENANELEA_20); gnlProkkaENANELEA_21 (original name was: gnl|Prokka|ENANELEA_21); gnlProkkaENANELEA_22 (original name was: gnl|Prokka|ENANELEA_22); gnlProkkaENANELEA_23 (original name was: gnl|Prokka|ENANELEA_23); gnlProkkaENANELEA_24 (original name was: gnl|Prokka|ENANELEA_24); gnlProkkaENANELEA_25 (original name was: gnl|Prokka|ENANELEA_25); gnlProkkaENANELEA_26 (original name was: gnl|Prokka|ENANELEA_26); gnlProkkaENANELEA_27 (original name was: gnl|Prokka|ENANELEA_27); gnlProkkaENANELEA_28 (original name was: gnl|Prokka|ENANELEA_28); gnlProkkaENANELEA_29 (original name was: gnl|Prokka|ENANELEA_29); gnlProkkaENANELEA_30 (original name was: gnl|Prokka|ENANELEA_30); gnlProkkaENANELEA_31 (original name was: gnl|Prokka|ENANELEA_31); gnlProkkaENANELEA_32 (original name was: gnl|Prokka|ENANELEA_32); gnlProkkaENANELEA_33 (original name was: gnl|Prokka|ENANELEA_33); gnlProkkaENANELEA_34 (original name was: gnl|Prokka|ENANELEA_34); gnlProkkaENANELEA_35 (original name was: gnl|Prokka|ENANELEA_35); gnlProkkaENANELEA_36 (original name was: gnl|Prokka|ENANELEA_36); gnlProkkaENANELEA_37 (original name was: gnl|Prokka|ENANELEA_37); gnlProkkaENANELEA_38 (original name was: gnl|Prokka|ENANELEA_38); gnlProkkaENANELEA_39 (original name was: gnl|Prokka|ENANELEA_39); gnlProkkaENANELEA_40 (original name was: gnl|Prokka|ENANELEA_40); gnlProkkaENANELEA_41 (original name was: gnl|Prokka|ENANELEA_41); gnlProkkaENANELEA_42 (original name was: gnl|Prokka|ENANELEA_42); gnlProkkaENANELEA_43 (original name was: gnl|Prokka|ENANELEA_43); gnlProkkaENANELEA_44 (original name was: gnl|Prokka|ENANELEA_44); gnlProkkaENANELEA_45 (original name was: gnl|Prokka|ENANELEA_45); gnlProkkaENANELEA_46 (original name was: gnl|Prokka|ENANELEA_46); gnlProkkaENANELEA_47 (original name was: gnl|Prokka|ENANELEA_47); gnlProkkaENANELEA_49 (original name was: gnl|Prokka|ENANELEA_49); gnlProkkaENANELEA_50 (original name was: gnl|Prokka|ENANELEA_50); gnlProkkaENANELEA_51 (original name was: gnl|Prokka|ENANELEA_51); gnlProkkaENANELEA_52 (original name was: gnl|Prokka|ENANELEA_52); gnlProkkaENANELEA_53 (original name was: gnl|Prokka|ENANELEA_53); gnlProkkaENANELEA_54 (original name was: gnl|Prokka|ENANELEA_54); gnlProkkaENANELEA_55 (original name was: gnl|Prokka|ENANELEA_55); gnlProkkaENANELEA_56 (original name was: gnl|Prokka|ENANELEA_56); gnlProkkaENANELEA_57 (original name was: gnl|Prokka|ENANELEA_57); gnlProkkaENANELEA_58 (original name was: gnl|Prokka|ENANELEA_58); gnlProkkaENANELEA_59 (original name was: gnl|Prokka|ENANELEA_59); gnlProkkaENANELEA_60 (original name was: gnl|Prokka|ENANELEA_60)

Compact view

gnlProkkaENANELEA_10 - Region 1 - RRE-containing

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Location: 1 - 10,420 nt. (total: 10,420 nt) Show pHMM detection rules used

Region on contig edge.

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaENANELEA_48 - Region 1 - arylpolyene

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Location: 15,296 - 62,901 nt. (total: 47,606 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

NRPS/PKS substrates

NRPS/PKS substrate predictions

ctg48_61

AMP-binding (46..308): X

nrpys: Asp, Asn, Glu, Gln, Aad

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: YMRMIITSSK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)