GCA_034555095.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaJJOMJCOB_1 (original name was: gnl|Prokka|JJOMJCOB_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	RiPP-like	105,187	117,337
Region 1.2	cyclic-lactone-autoinducer	579,709	600,420

gnlProkkaJJOMJCOB_8 (original name was: gnl|Prokka|JJOMJCOB_8)

Region	Type	From	To	Most similar known cluster		Similarity
Region 8.1	T3PKS	1	26,714

gnlProkkaJJOMJCOB_9 (original name was: gnl|Prokka|JJOMJCOB_9)

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	terpene	97,910	110,094

Region	Type	From	To	Similarity
Region 1.1	RiPP-like	105,187	117,337
Region 1.2	cyclic-lactone-autoinducer	579,709	600,420
Region 8.1	T3PKS	1	26,714
Region 9.1	terpene	97,910	110,094

No secondary metabolite regions were found in these records:: gnlProkkaJJOMJCOB_2 (original name was: gnl|Prokka|JJOMJCOB_2); gnlProkkaJJOMJCOB_3 (original name was: gnl|Prokka|JJOMJCOB_3); gnlProkkaJJOMJCOB_4 (original name was: gnl|Prokka|JJOMJCOB_4); gnlProkkaJJOMJCOB_5 (original name was: gnl|Prokka|JJOMJCOB_5); gnlProkkaJJOMJCOB_6 (original name was: gnl|Prokka|JJOMJCOB_6); gnlProkkaJJOMJCOB_7 (original name was: gnl|Prokka|JJOMJCOB_7); gnlProkkaJJOMJCOB_10 (original name was: gnl|Prokka|JJOMJCOB_10); gnlProkkaJJOMJCOB_11 (original name was: gnl|Prokka|JJOMJCOB_11); gnlProkkaJJOMJCOB_12 (original name was: gnl|Prokka|JJOMJCOB_12); gnlProkkaJJOMJCOB_13 (original name was: gnl|Prokka|JJOMJCOB_13); gnlProkkaJJOMJCOB_14 (original name was: gnl|Prokka|JJOMJCOB_14); gnlProkkaJJOMJCOB_15 (original name was: gnl|Prokka|JJOMJCOB_15); gnlProkkaJJOMJCOB_16 (original name was: gnl|Prokka|JJOMJCOB_16); gnlProkkaJJOMJCOB_17 (original name was: gnl|Prokka|JJOMJCOB_17); gnlProkkaJJOMJCOB_18 (original name was: gnl|Prokka|JJOMJCOB_18); gnlProkkaJJOMJCOB_19 (original name was: gnl|Prokka|JJOMJCOB_19); gnlProkkaJJOMJCOB_20 (original name was: gnl|Prokka|JJOMJCOB_20); gnlProkkaJJOMJCOB_21 (original name was: gnl|Prokka|JJOMJCOB_21); gnlProkkaJJOMJCOB_22 (original name was: gnl|Prokka|JJOMJCOB_22); gnlProkkaJJOMJCOB_23 (original name was: gnl|Prokka|JJOMJCOB_23); gnlProkkaJJOMJCOB_24 (original name was: gnl|Prokka|JJOMJCOB_24); gnlProkkaJJOMJCOB_25 (original name was: gnl|Prokka|JJOMJCOB_25); gnlProkkaJJOMJCOB_26 (original name was: gnl|Prokka|JJOMJCOB_26); gnlProkkaJJOMJCOB_27 (original name was: gnl|Prokka|JJOMJCOB_27); gnlProkkaJJOMJCOB_28 (original name was: gnl|Prokka|JJOMJCOB_28); gnlProkkaJJOMJCOB_29 (original name was: gnl|Prokka|JJOMJCOB_29); gnlProkkaJJOMJCOB_30 (original name was: gnl|Prokka|JJOMJCOB_30); gnlProkkaJJOMJCOB_31 (original name was: gnl|Prokka|JJOMJCOB_31); gnlProkkaJJOMJCOB_32 (original name was: gnl|Prokka|JJOMJCOB_32); gnlProkkaJJOMJCOB_33 (original name was: gnl|Prokka|JJOMJCOB_33); gnlProkkaJJOMJCOB_34 (original name was: gnl|Prokka|JJOMJCOB_34)

Compact view

gnlProkkaJJOMJCOB_1 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 105,187 - 117,337 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJJOMJCOB_1 - Region 2 - cyclic-lactone-autoinducer

Download region GenBank file

Download region SVG

Location: 579,709 - 600,420 nt. (total: 20,712 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJJOMJCOB_8 - Region 1 - T3PKS

Download region GenBank file

Download region SVG

Location: 1 - 26,714 nt. (total: 26,714 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJJOMJCOB_9 - Region 1 - terpene

Download region GenBank file

Download region SVG

Location: 97,910 - 110,094 nt. (total: 12,185 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.