Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_035758325.1	Streptococcus thermophilus	SCB0351	SAMN39326816	2013-09-10	China:Guangdong	-	0	0	34	28	44.05
2	GCA_035818935.1	Streptococcus thermophilus	SIT-20.S	SAMN38454960	2017-06-23	China:Yunan	-	11	0	34	32	46.69
3	GCA_001685375.1	Streptococcus thermophilus	CS8	SAMN05281844	2015	China: Yunnan	-	12	0	34	27	43.42
4	GCA_000011845.1	Streptococcus thermophilus CNRZ1066	CNRZ1066	SAMN02603344	-	-	-	46	0	34	28	44.05
5	GCA_025739325.1	Streptococcus thermophilus	CNRZ1151	SAMN16933238	1995	Ireland	-	95	0	37	29	47.01
6	GCA_025186555.1	Streptococcus thermophilus	CIRM-BIA 1122	SAMN10365664	1979	France	-	98	0	33	33	46.67
7	GCA_903891195.1	Streptococcus thermophilus	-	SAMEA6957282	1979	France	-	98	0	33	29	43.93
8	GCA_025186945.1	Streptococcus thermophilus	CIRM-BIA 1123	SAMN10365654	1975	France	-	101	0	34	33	47.38
9	GCA_025187405.1	Streptococcus thermophilus	CIRM-BIA 29	SAMN10365639	1960	Netherlands	-	102	0	37	33	49.58
10	GCA_903886205.1	Streptococcus thermophilus	-	SAMEA6957290	1960	Netherlands	-	102	0	37	29	47.01
11	GCA_019449915.1	Streptococcus thermophilus	Brie28	SAMN19136587	2020-11-09	Ireland	-	103	0	34	33	47.38
12	GCA_025187445.1	Streptococcus thermophilus	CIRM-BIA 1364	SAMN10365636	1995	France	-	108	0	34	33	47.38
13	GCA_036923315.1	Streptococcus thermophilus	TCI633	SAMN39973063	2016-03-24	Taiwan	Homo sapiens	111	0	34	28	44.05
14	GCA_039783195.1	Streptococcus thermophilus	90730	SAMN16933235	1995	Ireland	-	115	0	34	29	44.69
15	GCA_039784985.1	Streptococcus thermophilus	4147	SAMN16933253	1996	Ireland	-	117	0	34	29	44.69
16	GCA_001514435.1	Streptococcus thermophilus	S9	SAMN04384202	2013	China	-	121	0	34	29	44.69
17	GCA_025187185.1	Streptococcus thermophilus	CIRM-BIA 1116	SAMN10365649	1973	France	-	124	0	34	33	47.38
18	GCA_903891105.1	Streptococcus thermophilus	-	SAMEA6957280	1963	France	-	124	0	34	29	44.69
19	GCA_009741815.1	Streptococcus thermophilus	ST_AVK	SAMN13198391	-	-	-	134	0	34	32	46.69
20	GCA_025187545.1	Streptococcus thermophilus	CIRM-BIA 16	SAMN10365632	1954	France	-	184	0	37	33	49.58
21	GCA_903884415.1	Streptococcus thermophilus	-	SAMEA6957285	1954	France	-	184	0	37	29	47.01
22	GCA_028864795.1	Streptococcus thermophilus	TCI633	SAMN31857476	2013-11-11	Taiwan: Taipei	Homo sapiens	278	0	34	25	42.20
23	GCA_039781665.1	Streptococcus thermophilus	4052	SAMN16933229	1995	Ireland	-	296	0	26	29	38.95
24	GCA_025187235.1	Streptococcus thermophilus	CIRM-BIA 67	SAMN10365647	1971	France	-	416	0	21	32	38.28
25	GCA_025187265.1	Streptococcus thermophilus	CIRM-BIA 65	SAMN10365646	1971	France	-	416	0	21	32	38.28
26	GCA_903886475.1	Streptococcus thermophilus	-	SAMEA6957296	1971	France	-	416	0	21	28	35.00
27	GCA_903960675.1	Streptococcus thermophilus	-	SAMEA6957297	1971	France	-	416	0	21	27	34.21
28	GCA_039783785.1	Streptococcus thermophilus	CNRZ887	SAMN16933249	1995	Ireland	-	417	0	21	28	35.00
29	GCA_025187015.1	Streptococcus thermophilus	CIRM-BIA 2101	SAMN10365652	1975	Germany	-	418	0	21	32	38.28
30	GCA_025187645.1	Streptococcus thermophilus	CIRM-BIA 1056	SAMN10365627	1990	Indonesia	-	418	0	21	32	38.28
31	GCA_903891305.1	Streptococcus thermophilus	-	SAMEA6957288	1975	Germany	-	418	0	21	28	35.00
32	GCA_025187275.1	Streptococcus thermophilus	CIRM-BIA 36	SAMN10365645	1971	France	-	419	0	21	32	38.28
33	GCA_903886385.1	Streptococcus thermophilus	-	SAMEA6957294	1971	France	-	419	0	21	28	35.00
34	GCA_025186965.1	Streptococcus thermophilus	CIRM-BIA 23	SAMN10365655	1958	France	-	469	0	26	33	42.01
35	GCA_903886195.1	Streptococcus thermophilus	-	SAMEA6957289	1955	France	-	469	0	26	29	38.95
36	GCA_000011825.1	Streptococcus thermophilus LMG 18311	LMG 18311	SAMN02604079	-	-	-	481	0	37	29	47.01
37	GCA_025187195.1	Streptococcus thermophilus	CIRM-BIA 1117	SAMN10365648	1973	France	-	494	0	21	32	38.28
38	GCA_025739385.1	Streptococcus thermophilus	4067	SAMN16933230	1996	Ireland	-	673	0	22	28	35.61
39	GCA_020076015.1	Streptococcus thermophilus	CF13_14	SAMN15078605	2018-03-12	USA:MD	Homo sapiens	683	0	22	34	40.50
40	GCA_039783225.1	Streptococcus thermophilus	CNRZ760	SAMN16933237	1995	Ireland	-	683	0	22	30	37.20
41	GCA_025186565.1	Streptococcus thermophilus	CIRM-BIA 1049	SAMN10365665	1979	France	-	685	0	22	34	40.50
42	GCA_025186625.1	Streptococcus thermophilus	CIRM-BIA 1048	SAMN10365662	1978	Bulgaria	-	685	0	22	33	39.66
43	GCA_903890905.1	Streptococcus thermophilus	-	SAMEA6957275	1978	Bulgaria	-	685	0	22	29	36.40
44	GCA_903890925.1	Streptococcus thermophilus	-	SAMEA6957276	1978	France	-	685	0	22	30	37.20
45	GCA_020075875.1	Streptococcus thermophilus	CF1_14	SAMN06464116	2016-10-15	USA:MD	Homo sapiens	687	0	21	33	39.12
46	GCA_025187145.1	Streptococcus thermophilus	CIRM-BIA 772	SAMN10365650	1973	France	-	699	0	22	32	38.83
47	GCA_903886635.1	Streptococcus thermophilus	-	SAMEA6957298	1963	France	-	699	0	22	28	35.61
48	GCA_025186525.1	Streptococcus thermophilus	CIRM-BIA 1121	SAMN10365663	1978	France	-	702	0	27	32	41.87
49	GCA_903891135.1	Streptococcus thermophilus	-	SAMEA6957281	1978	France	-	702	0	27	28	38.90
50	GCA_002443035.1	Streptococcus thermophilus	B59671	SAMN07369158	-	USA:ERRC at Wyndmoor, PA	-	708	0	26	29	38.95
51	GCA_006539425.1	Streptococcus thermophilus	-	SAMD00097243	-	-	-	710	0	26	32	41.23
52	GCA_013307265.1	Streptococcus thermophilus	CS9	SAMN09536719	2014	China	-	711	0	26	30	39.70
53	GCA_025186665.1	Streptococcus thermophilus	CIRM-BIA 1119	SAMN10365661	1978	Bulgaria	-	711	0	23	34	41.05
54	GCA_027947275.1	Streptococcus thermophilus	TSGB 4240	SAMN32339319	2020-07	Turkey	-	711	0	17	34	38.01
55	GCA_039783105.1	Streptococcus thermophilus	90729	SAMN16933234	1995	Ireland	-	711	0	22	30	37.20
56	GCA_039784895.1	Streptococcus thermophilus	ST55	SAMN16933245	1995	Ireland	-	711	0	26	30	39.70
57	GCA_025186785.1	Streptococcus thermophilus	CIRM-BIA 1050	SAMN10365657	1973	Greece	-	712	0	25	33	41.40
58	GCA_039782795.1	Streptococcus thermophilus	90728	SAMN16933233	1995	Ireland	-	712	0	23	30	37.80
59	GCA_903890945.1	Streptococcus thermophilus	-	SAMEA6957277	1973	Greece	-	712	0	25	29	38.29
60	GCA_029983065.1	Streptococcus thermophilus	FUA329	SAMN31530271	2020-05-27	China:Lianyungang	Homo sapiens	714	0	26	32	41.23
61	GCA_025187585.1	Streptococcus thermophilus	CIRM-BIA 1860	SAMN10365630	1979	Austria	-	715	0	23	33	40.22
62	GCA_025132955.1	Streptococcus thermophilus	1047	SAMN10365132	2007	Kenya	-	718	0	26	33	42.01
63	GCA_025186725.1	Streptococcus thermophilus	CIRM-BIA 1124	SAMN10365660	1978	France	-	718	0	26	33	42.01
64	GCA_025186805.1	Streptococcus thermophilus	CIRM-BIA 1047	SAMN10365659	1978	France	-	718	0	26	33	42.01
65	GCA_903890825.1	Streptococcus thermophilus	-	SAMEA6957274	1978	France	-	718	0	26	29	38.95
66	GCA_025187565.1	Streptococcus thermophilus	CIRM-BIA 1057	SAMN10365631	1991	France	-	719	0	26	33	42.01
67	GCA_038049945.1	Streptococcus thermophilus	TCI125	SAMN40642328	2013-11	Taiwan:Taipei	-	719	0	26	29	38.95
68	GCA_039784855.1	Streptococcus thermophilus	CNRZ1202	SAMN16933239	1995	Ireland	-	720	0	25	29	38.29
69	GCA_040883385.1	Streptococcus thermophilus	AM-ST-89	SAMN42007031	-	-	-	720	0	25	34	42.20
70	GCA_045159855.1	Streptococcus thermophilus	MM8	SAMN16933250	2017	Ireland	-	720	0	26	28	38.21
71	GCA_021229135.1	Streptococcus thermophilus	8253 (205)	SAMN23827835	2001	Bulgaria: Balkan Mountains	-	722	0	24	33	40.80
72	GCA_025122495.1	Streptococcus thermophilus	CIRM-BIA 1131	SAMN10365212	1987	Greece	-	723	0	24	33	40.80
73	GCA_900094135.1	Streptococcus thermophilus	ACA-DC 2	SAMEA4355128	-	-	-	724	0	28	29	40.31
74	GCA_039784805.1	Streptococcus thermophilus	AVA116	SAMN16933236	1996	Ireland	-	725	0	28	29	40.31
75	GCA_025187705.1	Streptococcus thermophilus	CIRM-BIA 1125	SAMN10365625	1987	Greece	-	729	0	23	32	39.41
76	GCA_903891205.1	Streptococcus thermophilus	-	SAMEA6957283	1987	Greece	-	729	0	23	28	36.24
77	GCA_019449675.1	Streptococcus thermophilus	Vach57	SAMN19116181	2020-11-09	Ireland	-	730	0	23	33	40.22
78	GCA_013370965.1	Streptococcus thermophilus	CBC-S77	SAMN15249454	1977-05-02	Bulgaria: West Rhode Mountain	-	731	0	30	33	44.60
79	GCA_027947295.1	Streptococcus thermophilus	TSGB 4236	SAMN32339317	2020-07	Turkey	-	731	0	21	32	38.28
80	GCA_027947245.1	Streptococcus thermophilus	TSGB 4251	SAMN32339323	2020-07	Turkey	-	733	0	23	33	40.22
81	GCA_027947375.1	Streptococcus thermophilus	TSGB 4231	SAMN32339314	2020-07	Turkey	-	733	0	23	33	40.22
82	GCA_028463905.1	Streptococcus thermophilus	strain TSGB 4141	SAMN32902037	2020-07	Turkey	-	733	0	23	29	37.01
83	GCA_000182875.1	Streptococcus thermophilus ND03	ND03	SAMN02603938	-	-	-	734	0	22	29	36.40
84	GCA_001266475.1	Streptococcus thermophilus	KLDS3.1012	SAMN03957073	2009-02-02	China: Inner Mongolia	-	734	0	22	29	36.40
85	GCA_002012365.1	Streptococcus thermophilus	APC151	SAMN06349996	2015-02-13	Ireland	fish	734	0	22	29	36.40
86	GCA_003129655.1	Streptococcus thermophilus	KU30	SAMN09099014	2009-10-01	China:Hebei	-	734	0	22	32	38.83
87	GCA_020844005.1	Streptococcus thermophilus	4078	SAMN16933231	1996	Ireland	-	734	0	22	29	36.40
88	GCA_025187665.1	Streptococcus thermophilus	CIRM-BIA 1055	SAMN10365626	1990	France	-	734	0	22	33	39.66
89	GCA_041514265.1	Streptococcus thermophilus	S24735	SAMN18478710	2019	Switzerland	-	734	0	23	27	35.47
90	GCA_903891025.1	Streptococcus thermophilus	-	SAMEA6957279	1990	France	-	734	0	22	29	36.40
91	GCA_019449755.1	Streptococcus thermophilus	Brie1	SAMN19116153	2020-11-09	Ireland	-	735	0	22	33	39.66
92	GCA_020075895.1	Streptococcus thermophilus	CF2_14	SAMN06464117	2016-10-15	USA:MD	Homo sapiens	735	0	22	33	39.66
93	GCA_020829055.1	Streptococcus thermophilus	B4	SAMN18713779	2019	Ireland: Cork	-	735	0	22	33	39.66
94	GCA_020829085.1	Streptococcus thermophilus	B2	SAMN18523655	2019	Ireland: Cork City	-	735	0	22	33	39.66
95	GCA_020829095.1	Streptococcus thermophilus	B9	SAMN18713787	2020	Ireland: Cork	-	735	0	22	33	39.66
96	GCA_020829125.1	Streptococcus thermophilus	B1	SAMN18523653	2019	Ireland: Cork city	-	735	0	22	33	39.66
97	GCA_024334065.1	Streptococcus thermophilus	CH8	SAMN07809268	2005-02-07	Denmark	-	735	0	26	28	38.21
98	GCA_025187465.1	Streptococcus thermophilus	CIRM-BIA 1058	SAMN10365637	1995	France	-	735	0	22	33	39.66
99	GCA_027947325.1	Streptococcus thermophilus	TSGB 4232	SAMN32339315	2020-07	Turkey	-	735	0	25	32	40.61
100	GCA_003443395.1	Streptococcus thermophilus	ST106	SAMN09909637	-	USA:ERRC at Wyndmoor, PA	-	736	0	26	27	37.48