GCA_036317965.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaADFADJAD_4 (original name was: gnl|Prokka|ADFADJAD_4)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	phosphonate	324,804	339,068	polysaccharide B	Saccharide	43%

gnlProkkaADFADJAD_7 (original name was: gnl|Prokka|ADFADJAD_7)

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	RRE-containing	108,891	129,244	polysaccharide C	Saccharide	16%

gnlProkkaADFADJAD_15 (original name was: gnl|Prokka|ADFADJAD_15)

Region	Type	From	To	Most similar known cluster		Similarity
Region 15.1	NRPS-like	73,181	115,610

No secondary metabolite regions were found in these records:: gnlProkkaADFADJAD_1 (original name was: gnl|Prokka|ADFADJAD_1); gnlProkkaADFADJAD_2 (original name was: gnl|Prokka|ADFADJAD_2); gnlProkkaADFADJAD_3 (original name was: gnl|Prokka|ADFADJAD_3); gnlProkkaADFADJAD_5 (original name was: gnl|Prokka|ADFADJAD_5); gnlProkkaADFADJAD_6 (original name was: gnl|Prokka|ADFADJAD_6); gnlProkkaADFADJAD_8 (original name was: gnl|Prokka|ADFADJAD_8); gnlProkkaADFADJAD_9 (original name was: gnl|Prokka|ADFADJAD_9); gnlProkkaADFADJAD_10 (original name was: gnl|Prokka|ADFADJAD_10); gnlProkkaADFADJAD_11 (original name was: gnl|Prokka|ADFADJAD_11); gnlProkkaADFADJAD_12 (original name was: gnl|Prokka|ADFADJAD_12); gnlProkkaADFADJAD_13 (original name was: gnl|Prokka|ADFADJAD_13); gnlProkkaADFADJAD_14 (original name was: gnl|Prokka|ADFADJAD_14); gnlProkkaADFADJAD_16 (original name was: gnl|Prokka|ADFADJAD_16); gnlProkkaADFADJAD_17 (original name was: gnl|Prokka|ADFADJAD_17); gnlProkkaADFADJAD_18 (original name was: gnl|Prokka|ADFADJAD_18); gnlProkkaADFADJAD_19 (original name was: gnl|Prokka|ADFADJAD_19); gnlProkkaADFADJAD_20 (original name was: gnl|Prokka|ADFADJAD_20); gnlProkkaADFADJAD_21 (original name was: gnl|Prokka|ADFADJAD_21); gnlProkkaADFADJAD_22 (original name was: gnl|Prokka|ADFADJAD_22); gnlProkkaADFADJAD_23 (original name was: gnl|Prokka|ADFADJAD_23); gnlProkkaADFADJAD_24 (original name was: gnl|Prokka|ADFADJAD_24); gnlProkkaADFADJAD_25 (original name was: gnl|Prokka|ADFADJAD_25); gnlProkkaADFADJAD_26 (original name was: gnl|Prokka|ADFADJAD_26); gnlProkkaADFADJAD_27 (original name was: gnl|Prokka|ADFADJAD_27); gnlProkkaADFADJAD_28 (original name was: gnl|Prokka|ADFADJAD_28); gnlProkkaADFADJAD_29 (original name was: gnl|Prokka|ADFADJAD_29); gnlProkkaADFADJAD_30 (original name was: gnl|Prokka|ADFADJAD_30); gnlProkkaADFADJAD_31 (original name was: gnl|Prokka|ADFADJAD_31); gnlProkkaADFADJAD_32 (original name was: gnl|Prokka|ADFADJAD_32); gnlProkkaADFADJAD_33 (original name was: gnl|Prokka|ADFADJAD_33); gnlProkkaADFADJAD_34 (original name was: gnl|Prokka|ADFADJAD_34); gnlProkkaADFADJAD_35 (original name was: gnl|Prokka|ADFADJAD_35); gnlProkkaADFADJAD_36 (original name was: gnl|Prokka|ADFADJAD_36); gnlProkkaADFADJAD_37 (original name was: gnl|Prokka|ADFADJAD_37); gnlProkkaADFADJAD_38 (original name was: gnl|Prokka|ADFADJAD_38); gnlProkkaADFADJAD_39 (original name was: gnl|Prokka|ADFADJAD_39); gnlProkkaADFADJAD_40 (original name was: gnl|Prokka|ADFADJAD_40); gnlProkkaADFADJAD_41 (original name was: gnl|Prokka|ADFADJAD_41); gnlProkkaADFADJAD_42 (original name was: gnl|Prokka|ADFADJAD_42); gnlProkkaADFADJAD_43 (original name was: gnl|Prokka|ADFADJAD_43); gnlProkkaADFADJAD_44 (original name was: gnl|Prokka|ADFADJAD_44)

Compact view

gnlProkkaADFADJAD_4 - Region 1 - phosphonate

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Location: 324,804 - 339,068 nt. (total: 14,265 nt) Show pHMM detection rules used

phosphonate: (phosphonates and minimum(1, [2-Hacid_dh_C, Aldedh, Aminotran_1_2, Aminotran_5, AurF, CTP_transf_like, DUF4992, Fe-ADH, HMGL-like, Metallophos_2, NTP_transf_3, NTP_transf_5, PALP, PEP_mutase, TPP_enzyme_C, TPP_enzyme_N, phosphonates]) and not (phosphonatesHydrolase or phosphonatesMeIsocitrateLyase))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaADFADJAD_7 - Region 1 - RRE-containing

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Location: 108,891 - 129,244 nt. (total: 20,354 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaADFADJAD_15 - Region 1 - NRPS-like

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Location: 73,181 - 115,610 nt. (total: 42,430 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

No matches found.

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Legend

NRPS/PKS products

NRPS/PKS substrates

Predicted core structure(s)

For candidate cluster 1, location 73180 - 115610:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS substrate predictions

ctg15_77

AMP-binding (12..401): X

nrpys: Leu, Ile

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
Small clusters prediction:: Aliphatic, branched hydrophobic (Val, Leu, Ile, Abu, Ival)
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DALFLGVVLK
Nearest Stachelhaus code(s):: Leu or Ile DAIYLGVVLK (59% 8Å match); aIle DALVFGVVLK (56% 8Å match)
Stachelhaus code match:: 80% (moderate)