GCA_036353265.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaABCBAAIP_9 (original name was: gnl|Prokka|ABCBAAIP_9)

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	terpene	25,532	46,413

gnlProkkaABCBAAIP_12 (original name was: gnl|Prokka|ABCBAAIP_12)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	RiPP-like	106,706	118,856

gnlProkkaABCBAAIP_34 (original name was: gnl|Prokka|ABCBAAIP_34)

Region	Type	From	To	Most similar known cluster		Similarity
Region 32.1	cyclic-lactone-autoinducer	9,233	29,938

gnlProkkaABCBAAIP_45 (original name was: gnl|Prokka|ABCBAAIP_45)

Region	Type	From	To	Most similar known cluster		Similarity
Region 33.1	T3PKS	195,005	220,592

Region	Type	From	To	Similarity
Region 9.1	terpene	25,532	46,413
Region 12.1	RiPP-like	106,706	118,856
Region 32.1	cyclic-lactone-autoinducer	9,233	29,938
Region 33.1	T3PKS	195,005	220,592

No secondary metabolite regions were found in these records:: gnlProkkaABCBAAIP_1 (original name was: gnl|Prokka|ABCBAAIP_1); gnlProkkaABCBAAIP_2 (original name was: gnl|Prokka|ABCBAAIP_2); gnlProkkaABCBAAIP_3 (original name was: gnl|Prokka|ABCBAAIP_3); gnlProkkaABCBAAIP_4 (original name was: gnl|Prokka|ABCBAAIP_4); gnlProkkaABCBAAIP_5 (original name was: gnl|Prokka|ABCBAAIP_5); gnlProkkaABCBAAIP_6 (original name was: gnl|Prokka|ABCBAAIP_6); gnlProkkaABCBAAIP_7 (original name was: gnl|Prokka|ABCBAAIP_7); gnlProkkaABCBAAIP_8 (original name was: gnl|Prokka|ABCBAAIP_8); gnlProkkaABCBAAIP_10 (original name was: gnl|Prokka|ABCBAAIP_10); gnlProkkaABCBAAIP_11 (original name was: gnl|Prokka|ABCBAAIP_11); gnlProkkaABCBAAIP_13 (original name was: gnl|Prokka|ABCBAAIP_13); gnlProkkaABCBAAIP_14 (original name was: gnl|Prokka|ABCBAAIP_14); gnlProkkaABCBAAIP_15 (original name was: gnl|Prokka|ABCBAAIP_15); gnlProkkaABCBAAIP_16 (original name was: gnl|Prokka|ABCBAAIP_16); gnlProkkaABCBAAIP_17 (original name was: gnl|Prokka|ABCBAAIP_17); gnlProkkaABCBAAIP_18 (original name was: gnl|Prokka|ABCBAAIP_18); gnlProkkaABCBAAIP_19 (original name was: gnl|Prokka|ABCBAAIP_19); gnlProkkaABCBAAIP_20 (original name was: gnl|Prokka|ABCBAAIP_20); gnlProkkaABCBAAIP_21 (original name was: gnl|Prokka|ABCBAAIP_21); gnlProkkaABCBAAIP_22 (original name was: gnl|Prokka|ABCBAAIP_22); gnlProkkaABCBAAIP_23 (original name was: gnl|Prokka|ABCBAAIP_23); gnlProkkaABCBAAIP_24 (original name was: gnl|Prokka|ABCBAAIP_24); gnlProkkaABCBAAIP_25 (original name was: gnl|Prokka|ABCBAAIP_25); gnlProkkaABCBAAIP_26 (original name was: gnl|Prokka|ABCBAAIP_26); gnlProkkaABCBAAIP_27 (original name was: gnl|Prokka|ABCBAAIP_27); gnlProkkaABCBAAIP_28 (original name was: gnl|Prokka|ABCBAAIP_28); gnlProkkaABCBAAIP_29 (original name was: gnl|Prokka|ABCBAAIP_29); gnlProkkaABCBAAIP_30 (original name was: gnl|Prokka|ABCBAAIP_30); gnlProkkaABCBAAIP_31 (original name was: gnl|Prokka|ABCBAAIP_31); gnlProkkaABCBAAIP_46 (original name was: gnl|Prokka|ABCBAAIP_46); gnlProkkaABCBAAIP_47 (original name was: gnl|Prokka|ABCBAAIP_47); gnlProkkaABCBAAIP_48 (original name was: gnl|Prokka|ABCBAAIP_48); gnlProkkaABCBAAIP_49 (original name was: gnl|Prokka|ABCBAAIP_49)

Compact view

gnlProkkaABCBAAIP_9 - Region 1 - terpene

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Location: 25,532 - 46,413 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaABCBAAIP_12 - Region 1 - RiPP-like

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Location: 106,706 - 118,856 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaABCBAAIP_34 - Region 1 - cyclic-lactone-autoinducer

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Location: 9,233 - 29,938 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaABCBAAIP_45 - Region 1 - T3PKS

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Location: 195,005 - 220,592 nt. (total: 25,588 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.