Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_036430905.1	Limosilactobacillus reuteri	FI11596	SAMN33193073	2018-01	Ghana:Mankessim	-	0	0	0	1	1.00
2	GCA_036430965.1	Limosilactobacillus reuteri	FI11586	SAMN33193071	2018-01	Ghana:Sunyani	-	0	0	0	1	1.00
3	GCA_036430925.1	Limosilactobacillus reuteri	FI11605	SAMN33193074	2018-01	Ghana:Accra	-	1	0	0	1	1.00
4	GCA_036430985.1	Limosilactobacillus reuteri	FI11571	SAMN33193075	2018-01	Ghana:Dodowa	-	1	0	0	1	1.00
5	GCA_036431085.1	Limosilactobacillus reuteri	FI11589	SAMN33193067	2018-01	Ghana:Sunyani	-	1	0	0	1	1.00
6	GCA_036431965.1	Limosilactobacillus reuteri	LMAN-Sda	SAMN35624265	2018-01	Ghana	-	6	0	0	1	1.00
7	GCA_036432135.1	Limosilactobacillus reuteri	LTAD-12f	SAMN35624259	2018-01	Ghana	-	18	0	0	1	1.00
8	GCA_036431005.1	Limosilactobacillus reuteri	FI11625	SAMN33193070	2018-01	Ghana:Mankessim	-	135	0	0	1	1.00
9	GCA_036431025.1	Limosilactobacillus reuteri	FI11606	SAMN33193068	2018-01	Ghana:Accra	-	151	0	0	1	1.00
10	GCA_036432025.1	Limosilactobacillus reuteri	LSUN-24e	SAMN35624266	2018-01	Ghana	-	157	0	0	1	1.00
11	GCA_046763525.1	Limosilactobacillus reuteri	NCDC958	SAMN46209980	2018-01-08	India	-	526	0	0	0	0.00
12	GCA_019061135.1	Limosilactobacillus reuteri	E	SAMN17833190	2005	Slovakia: Ocova	Ovis aries	532	0	0	1	1.00
13	GCA_007280535.1	Limosilactobacillus reuteri	BIO5454	SAMN12284778	-	-	-	537	0	0	1	1.00
14	GCA_020785635.1	Limosilactobacillus reuteri	Cor137_1_1	SAMN22258596	2013-10	-	Amaru Indians	537	0	0	1	1.00
15	GCA_020785735.1	Limosilactobacillus reuteri	Cor137_3_1	SAMN22258597	2013-10	-	Amaru Indians	537	0	0	1	1.00
16	GCA_025189765.1	Limosilactobacillus reuteri	CIRM-BIA 929	SAMN10365494	1980	France	-	537	0	0	1	1.00
17	GCA_040785065.1	Limosilactobacillus reuteri	gbc_i	SAMN41082104	2021	USA: Glendale, Arizona	-	537	0	0	1	1.00
18	GCA_003175025.1	Limosilactobacillus reuteri	LR19	SAMN08934323	2016	China	horse	539	0	0	1	1.00
19	GCA_020023755.1	Limosilactobacillus reuteri	SD-RD830-FR	SAMN19814905	2020-01-01	France	Homo sapiens	540	0	0	0	0.00
20	GCA_025189745.1	Limosilactobacillus reuteri	CIRM-BIA 1534	SAMN10365495	1980	France	-	542	0	0	1	1.00
21	GCA_028462605.1	Limosilactobacillus reuteri	92071	SAMN32886977	2015-01-15	Germany: Kiel	-	542	1	0	1	1.41
22	GCA_003174815.1	Limosilactobacillus reuteri	LR18	SAMN08934322	2016	China	horse	543	0	0	1	1.00
23	GCA_003174855.1	Limosilactobacillus reuteri	LR4	SAMN08934317	2016	China	cow	543	0	0	1	1.00
24	GCA_003174865.1	Limosilactobacillus reuteri	LR9	SAMN08934316	2016	China	sheep	543	0	0	1	1.00
25	GCA_003174915.1	Limosilactobacillus reuteri	LR17	SAMN08934321	2016	China	horse	543	0	0	1	1.00
26	GCA_003174935.1	Limosilactobacillus reuteri	LR3	SAMN08934310	2016	China	goat	544	0	0	1	1.00
27	GCA_025189625.1	Limosilactobacillus reuteri	CIRM-BIA 2122	SAMN10365501	1993	-	-	544	0	0	1	1.00
28	GCA_025189645.1	Limosilactobacillus reuteri	CIRM-BIA 1439	SAMN10365500	1993	-	-	544	0	0	1	1.00
29	GCA_003174875.1	Limosilactobacillus reuteri	LR8	SAMN08934315	2016	China	sheep	545	0	0	1	1.00
30	GCA_003174945.1	Limosilactobacillus reuteri	LR13	SAMN08934320	2016	China	cow	545	0	0	1	1.00
31	GCA_003174955.1	Limosilactobacillus reuteri	LR14	SAMN08934312	2016	China	goat	545	0	0	1	1.00
32	GCA_003174995.1	Limosilactobacillus reuteri	LR11	SAMN08934311	2016	China	goat	545	0	0	1	1.00
33	GCA_003175015.1	Limosilactobacillus reuteri	LR2	SAMN08934309	2016	China	goat	545	0	0	1	1.00
34	GCA_003175125.1	Limosilactobacillus reuteri	LR1	SAMN08934308	2016	China	goat	545	0	0	1	1.00
35	GCA_003175075.1	Limosilactobacillus reuteri	LR10	SAMN08934318	2016	China	cow	546	0	0	1	1.00
36	GCA_020785545.1	Limosilactobacillus reuteri	SR14	SAMN22258601	2008	Ireland:Cork	Homo sapiens	546	0	0	1	1.00
37	GCA_020785595.1	Limosilactobacillus reuteri	SR11	SAMN22258600	2008	Ireland:Cork	Homo sapiens	546	0	0	1	1.00
38	GCA_022642805.1	Limosilactobacillus reuteri	L8	SAMN14239247	2016	Canada: Edmonton	Bos taurus	546	1	0	0	1.00
39	GCA_025189725.1	Limosilactobacillus reuteri	CIRM-BIA 911	SAMN10365496	1993	France	-	546	1	0	1	1.41
40	GCA_034424825.1	Limosilactobacillus reuteri	C4	SAMN38757438	1992-06-12	South Africa	Sus scrofa domesticus	546	1	0	1	1.41
41	GCA_020785505.1	Limosilactobacillus reuteri	ME-261	SAMN22258603	-	Japan	Homo sapiens	548	0	0	1	1.00
42	GCA_020785535.1	Limosilactobacillus reuteri	ME-262	SAMN22258602	-	Japan	Homo sapiens	548	0	0	1	1.00
43	GCA_000159475.2	Limosilactobacillus reuteri MM4-1A	MM4-1A	SAMN00001504	-	-	Homo sapiens	549	0	0	1	1.00
44	GCA_001046835.1	Limosilactobacillus reuteri	IRT	SAMN03382532	2009-04-01	South Korea: Gyeonggido, Giheung	Homo sapiens	549	0	0	0	0.00
45	GCA_001657495.1	Limosilactobacillus reuteri	CRL 1098	SAMN05182497	-	Germany	-	549	0	0	1	1.00
46	GCA_003061685.1	Limosilactobacillus reuteri	DS14_10	SAMN05942021	2016-03-06	USA:MD	Homo sapiens	549	0	0	1	1.00
47	GCA_003061745.1	Limosilactobacillus reuteri	DS13_10	SAMN05942020	2016-05-07	USA:MD	Homo sapiens	549	0	0	1	1.00
48	GCA_020785495.1	Limosilactobacillus reuteri	FJ3	SAMN22258607	2002	Japan	Homo sapiens	549	0	0	1	1.00
49	GCA_021165875.1	Limosilactobacillus reuteri	VHProbi E18	SAMN23526821	2021-01-25	China	-	549	0	0	0	0.00
50	GCA_021228055.1	Limosilactobacillus reuteri	VHProbi M07	SAMN23525688	2019-10-08	China	-	549	0	0	0	0.00
51	GCA_023078415.1	Limosilactobacillus reuteri	EFEL6901	SAMN27578393	2020-02	South Korea: Cheongju-si	-	549	0	0	0	0.00
52	GCA_025189695.1	Limosilactobacillus reuteri	CIRM-BIA 522	SAMN10365497	1972	-	-	549	0	0	1	1.00
53	GCA_028462635.1	Limosilactobacillus reuteri	92126	SAMN32886981	2015-01-15	Germany: Kiel	-	549	0	0	1	1.00
54	GCA_028462705.1	Limosilactobacillus reuteri	92128	SAMN32886982	2015-01-15	Germany: Kiel	-	549	0	0	1	1.00
55	GCA_030418275.1	Limosilactobacillus reuteri	ATCC PTA 4659	SAMN33733576	1997	Finland	Homo sapiens	549	0	0	0	0.00
56	GCA_035928175.1	Limosilactobacillus reuteri	VHProbi V43	SAMN39437308	2021-01-25	China:Qingdao	-	549	0	0	0	0.00
57	GCA_037966725.1	Limosilactobacillus reuteri	ATA-LTC-Lr050600	SAMN40643421	2000-06-05	Turkey:Balikesir	Homo sapiens	549	0	0	1	1.00
58	GCA_040961095.1	Limosilactobacillus reuteri	BG-R33 (DSM 33633)	SAMN42748060	-	-	Homo sapiens	549	0	0	0	0.00
59	GCA_040962025.1	Limosilactobacillus reuteri	ATCC PTA 5289	SAMN42748000	-	-	Homo sapiens	549	0	0	0	0.00
60	GCA_049808515.1	Limosilactobacillus reuteri	6132	SAMN47931717	2022-10-31	China: Beijing	Homo sapiens	549	0	0	1	1.00
61	GCA_000010005.1	Limosilactobacillus reuteri subsp. reuteri JCM 1112	-	SAMD00060920	-	-	-	550	0	0	0	0.00
62	GCA_000016825.1	Limosilactobacillus reuteri subsp. reuteri	DSM 20016	SAMN02598351	-	-	-	550	0	0	0	0.00
63	GCA_000160715.1	Limosilactobacillus reuteri MM2-3	MM2-3	SAMN00002242	-	-	Homo sapiens	550	1	0	1	1.41
64	GCA_001434615.1	Limosilactobacillus reuteri subsp. reuteri	DSM 20016	SAMN02369412	1982	-	-	550	0	0	1	1.00
65	GCA_004208615.1	Limosilactobacillus reuteri	ATG-F4	SAMN10888479	2018	South Korea	Homo sapiens	550	0	0	0	0.00
66	GCA_015377805.1	Limosilactobacillus reuteri	TK-F8A	SAMN13106284	2019-02-26	China:Zhejiang province	-	550	0	0	0	0.00
67	GCA_018884225.1	Limosilactobacillus reuteri	YLR001	SAMN16987598	2019-06	China: Qinghai Province	Yak	550	0	0	0	0.00
68	GCA_040142685.1	Limosilactobacillus reuteri	LU150	SAMN39639085	1998	Italy	Homo sapiens	550	0	0	0	0.00
69	GCA_033181025.1	Limosilactobacillus reuteri	RGW1	SAMN30465350	2017-07-20	China: Zhejiang	bovine	551	4	0	1	4.12
70	GCA_020785575.1	Limosilactobacillus reuteri	LMS11-1	SAMN22258599	-	USA	Homo sapiens	552	0	0	1	1.00
71	GCA_020785585.1	Limosilactobacillus reuteri	LMS11-3	SAMN22258598	-	USA	Homo sapiens	563	0	0	1	1.00
72	GCA_025369755.1	Limosilactobacillus reuteri	AM_LB1	SAMN30836479	2019	USA: Georgia	Gallus gallus	567	0	0	0	0.00
73	GCA_001756765.1	Limosilactobacillus reuteri	HI24	SAMN05257121	2015-09-22	India: Pune	-	573	0	0	1	1.00
74	GCA_020023775.1	Limosilactobacillus reuteri	SD-LRE2-IT	SAMN19814906	2020-01-01	Italy	Homo sapiens	588	1	0	0	1.00
75	GCA_022642025.1	Limosilactobacillus reuteri	L11	SAMN14239249	2016	Canada: Edmonton	Bos taurus	593	0	0	1	1.00
76	GCA_036323925.1	Limosilactobacillus reuteri	LRA7	SAMN39585552	2022-07-20	China	dog	636	2	0	0	2.00
77	GCA_011009765.1	Limosilactobacillus reuteri	D4	SAMN10822529	2017	United Kingdom	Meles meles	644	1	0	1	1.41
78	GCA_020784255.1	Limosilactobacillus reuteri	2A	SAMN22258665	2015	Canada:Calgary	Porqupine	674	0	0	1	1.00
79	GCA_020784455.1	Limosilactobacillus reuteri	FUA 3048	SAMN22258655	2005	Canada:Edmonton	Rat	676	0	0	1	1.00
80	GCA_020785095.1	Limosilactobacillus reuteri	LTM_Jesus_1_1	SAMN22258625	2014-02	USA:California	Lion-tailed Macaque	676	0	0	1	1.00
81	GCA_030262475.1	Limosilactobacillus reuteri	BIO7251	SAMN35621297	2021-01	France	-	678	0	0	1	1.00
82	GCA_020785035.1	Limosilactobacillus reuteri	LTM_Jesus_5_1	SAMN22258626	2014-02	USA:California	Lion-tailed Macaque	680	0	0	1	1.00
83	GCA_003703885.1	Limosilactobacillus reuteri	2010	SAMN08615538	-	-	rat	682	1	0	1	1.41
84	GCA_004684995.1	Limosilactobacillus reuteri	I8-5	SAMN11294217	2017	USA: San Francisco	Mus musculus	682	0	0	1	1.00
85	GCA_020785115.1	Limosilactobacillus reuteri	BHM_Lincecum_1_1	SAMN22258621	2014-02	USA:California	Black Howler Monkey	682	0	0	1	1.00
86	GCA_000758185.1	Limosilactobacillus reuteri	LTH5448	SAMN02869572	1998	Germany	-	683	0	0	1	1.00
87	GCA_020784595.1	Limosilactobacillus reuteri	C4	SAMN22258648	2015	Canada:Vancouver	Capy C	683	0	0	1	1.00
88	GCA_020784605.1	Limosilactobacillus reuteri	C3	SAMN22258647	2015	Canada:Vancouver	Capy C	683	0	0	1	1.00
89	GCA_030226325.1	Limosilactobacillus reuteri	UMB5704	SAMN34998689	2019-10	USA: Maywood, IL	Homo sapiens	683	0	0	1	1.00
90	GCA_020785255.1	Limosilactobacillus reuteri	PNG008C_M	SAMN22258614	2015-03	Papua New Guinea	Homo sapiens	684	0	0	1	1.00
91	GCA_020785325.1	Limosilactobacillus reuteri	PNG008A_M	SAMN22258612	2015-03	Papua New Guinea	Homo sapiens	684	0	0	1	1.00
92	GCA_020785335.1	Limosilactobacillus reuteri	PNG008_ANA	SAMN22258611	2015-03	Papua New Guinea	Homo sapiens	684	0	0	1	1.00
93	GCA_020785355.1	Limosilactobacillus reuteri	PB-W1	SAMN22258610	2015-03	Papua New Guinea	Homo sapiens	684	0	0	1	1.00
94	GCA_020785415.1	Limosilactobacillus reuteri	PNG008_48h	SAMN22258609	2015-03	Papua New Guinea	Homo sapiens	684	0	0	1	1.00
95	GCA_020785475.1	Limosilactobacillus reuteri	PNG008_24h	SAMN22258608	2015-03	Papua New Guinea	Homo sapiens	684	0	0	1	1.00
96	GCA_020784795.1	Limosilactobacillus reuteri	apa71	SAMN22258639	-	Sweden	Monkey	685	1	0	1	1.41
97	GCA_020784555.1	Limosilactobacillus reuteri	D.l.1-B	SAMN22258650	2015	Canada:Edmonton	Dasyprocta leporina	686	0	0	1	1.00
98	GCA_020784575.1	Limosilactobacillus reuteri	C.p.1-C	SAMN22258649	2015	Canada:Edmonton	Coendou prehensilis	686	0	0	1	1.00
99	GCA_020784635.1	Limosilactobacillus reuteri	D.l.3-A	SAMN22258651	2015	Canada:Edmonton	Dasyprocta leporina	686	0	0	1	1.00
100	GCA_020784355.1	Limosilactobacillus reuteri	S_1_1	SAMN22258659	2014-02	USA:Nebraska	Springhaas	687	0	0	1	1.00