GCA_036552845.1 - 8 region(s)

Identified primary metabolite regions

c00005_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_5)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 5.1	Putrescine2spermidine	Aliphatic_amine	1	20,734	Arginine2putrescine R. gnavus	PUTR	40%

c00036_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_36)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 36.1	succinate2propionate	SCFA	1	14,847	Succinate to propionate A. sp. KLE1797	SUC	57%

c00054_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_54)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 54.1	TPP_AA_metabolism	Putative	1	24,580

c00068_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_68)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 68.1	Rnf_complex	E-MGC	21,334	46,661	Rnf complex C. sporogenes	RNF	83%

c00103_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_103)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 103.1	Pyruvate2acetate-formate	SCFA	1	5,752	Pyruvate to acetate-formate B. thetaiotaomicron	PFL_acetate	100%

c00107_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_107)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 107.1	NADH_dehydrogenase_I	E-MGC	1	26,734	NADH dehydrogenase I Bacteroides sp.	NADHD	47%

c00111_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_111)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 111.1	OD_fatty_acids	Putative	1	20,364

c00124_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_124)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 124.1	porA	SCFA	23,741	46,387	porA C. sporogenes	POR	60%

No primary metabolite regions were found in these records:: c00001_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_1); c00002_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_2); c00003_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_3); c00004_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_4); c00006_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_6); c00007_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_7); c00008_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_8); c00009_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_9); c00010_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_10); c00011_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_11); c00012_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_12); c00013_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_13); c00014_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_14); c00015_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_15); c00016_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_16); c00017_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_17); c00018_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_18); c00019_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_19); c00020_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_20); c00021_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_21); c00022_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_22); c00023_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_23); c00024_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_24); c00025_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_25); c00026_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_26); c00027_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_27); c00028_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_28); c00029_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_29); c00030_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_30); c00031_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_31); c00032_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_32); c00033_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_33); c00034_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_34); c00035_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_35); c00037_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_37); c00038_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_38); c00039_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_39); c00040_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_40); c00041_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_41); c00042_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_42); c00043_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_43); c00044_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_44); c00045_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_45); c00046_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_46); c00047_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_47); c00048_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_48); c00049_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_49); c00050_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_50); c00051_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_51); c00052_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_52); c00053_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_53); c00055_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_55); c00056_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_56); c00057_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_57); c00058_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_58); c00059_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_59); c00060_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_60); c00061_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_61); c00062_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_62); c00063_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_63); c00064_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_64); c00065_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_65); c00066_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_66); c00067_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_67); c00069_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_69); c00070_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_70); c00071_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_71); c00072_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_72); c00073_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_73); c00074_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_74); c00075_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_75); c00076_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_76); c00077_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_77); c00078_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_78); c00079_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_79); c00080_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_80); c00081_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_81); c00082_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_82); c00083_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_83); c00084_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_84); c00085_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_85); c00086_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_86); c00087_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_87); c00088_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_88); c00089_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_89); c00090_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_90); c00091_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_91); c00092_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_92); c00093_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_93); c00094_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_94); c00095_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_95); c00096_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_96); c00097_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_97); c00098_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_98); c00099_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_99); c00100_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_100); c00101_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_101); c00102_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_102); c00104_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_104); c00105_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_105); c00106_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_106); c00108_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_108); c00109_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_109); c00110_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_110); c00112_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_112); c00113_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_113); c00114_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_114); c00115_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_115); c00116_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_116); c00117_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_117); c00118_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_118); c00119_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_119); c00120_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_120); c00121_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_121); c00122_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_122); c00123_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_123); c00125_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_125); c00126_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_126); c00127_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_127); c00128_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_128); c00129_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_129); c00130_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_130); c00131_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_131); c00132_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_132); c00133_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_133); c00134_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_134); c00135_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_135); c00136_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_136); c00137_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_137); c00138_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_138); c00139_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_139); c00140_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_140); c00141_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_141); c00142_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_142); c00143_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_143); c00144_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_144); c00145_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_145); c00146_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_146); c00147_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_147); c00148_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_148); c00149_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_149); c00150_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_150); c00151_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_151); c00152_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_152); c00153_gnlPro.. (original name was: gnl|Prokka|HEKJFJML_153)

Compact view

c00005_gnlPro.. - Region 1 - Putrescine2spermidine

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Location: 1 - 20,734 nt. (total: 20,734 nt) Show pHMM detection rules used

Region on contig edge.

Putrescine2spermidine: (minimum(2, [AdoMet_dc, Spermine_synt_N, Spermine_synth]) or (Orn_DAP_Arg_deC and Sacchrp_dh_C))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00036_gnlPro.. - Region 1 - succinate2propionate

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Location: 1 - 14,847 nt. (total: 14,847 nt) Show pHMM detection rules used

Region on contig edge.

succinate2propionate: (minimum(4, [AcetylCoA_hyd_C, AcetylCoA_hydro, B12-binding, Biotin_lipoyl, Glyoxalase_4, HMGL-like, MM_CoA_mutase, MeaB, OAD_beta, OAD_gamma, PYC_OADA]) and minimum(1, [CT_Btheta, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, CT_Vparvula]) and not Cytidylate_kin)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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KnownClusterBlast

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c00054_gnlPro.. - Region 1 - TPP_AA_metabolism

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Location: 1 - 24,580 nt. (total: 24,580 nt) Show pHMM detection rules used

Region on contig edge.

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00068_gnlPro.. - Region 1 - Rnf_complex

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Location: 21,334 - 46,661 nt. (total: 25,328 nt) Show pHMM detection rules used

Rnf_complex: (Complex1_51K and minimum(5, [FMN_bind, FeS, Fer4, Fer4_9, NQR2_RnfD_RnfE, Rnf-Nqr, RnfC_N, SLBB]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00103_gnlPro.. - Region 1 - Pyruvate2acetate-formate

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Location: 1 - 5,752 nt. (total: 5,752 nt) Show pHMM detection rules used

Region on contig edge.

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

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c00107_gnlPro.. - Region 1 - NADH_dehydrogenase_I

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Location: 1 - 26,734 nt. (total: 26,734 nt) Show pHMM detection rules used

Region on contig edge.

NADH_dehydrogenase_I: (Oxidored_q4 and Oxidored_q6 and Complex1_30kDa and Complex1_49kDa and NADHdh and Oxidored_q3 and Oxidored_q2 and minimum(4, [Fe-2S_thioredx, Fer2_4, Fer4_7, Molybdop_Fe4S4, Molydop_binding, NADH-G_4Fe-4S_3, NADH_4Fe-4S, Proton_antipo_M, Proton_antipo_N, SLBB]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

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c00111_gnlPro.. - Region 1 - OD_fatty_acids

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Location: 1 - 20,364 nt. (total: 20,364 nt) Show pHMM detection rules used

Region on contig edge.

OD_fatty_acids: (minimum(1, [PFOR_II, POR, POR_N]) and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (Gly_radical_scatole or Gly_radical or Gly_430_pcre or Gly_8-9_TMA))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00124_gnlPro.. - Region 1 - porA

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Location: 23,741 - 46,387 nt. (total: 22,647 nt) Show pHMM detection rules used

porA: (Fer4_7 and TPP_enzyme_C and POR and POR_N and PFOR_II and not (EKR or Fer4_16))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters