GCA_036780525.1 - 8 region(s)

Identified primary metabolite regions

c00007_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_7)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 7.1	Rnf_complex	E-MGC	3,933	29,048	Rnf complex C. sporogenes	RNF	83%

c00010_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_10)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 10.1	NADH_dehydrogenase_I	E-MGC	9,510	32,284	NADH dehydrogenase I Bacteroides sp.	NADHD	47%

c00019_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_19)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 19.1	Putrescine2spermidine	Aliphatic_amine	1	22,701	Arginine2putrescine R. gnavus	PUTR	40%

c00031_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_31)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 31.1	Fumarate2succinate	SCFA	4,075	21,968	Fumarate to succinate B. thetaiotaomicron	SUC	100%

c00044_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_44)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 44.1	OD_fatty_acids	Putative	1	16,967

c00168_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_168)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 168.1	Pyruvate2acetate-formate	SCFA	1	5,225	Pyruvate to acetate-formate B. thetaiotaomicron	PFL_acetate	100%

c00174_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_174)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 174.1	TPP_AA_metabolism	Putative	1	5,054

c00216_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_216)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 216.1	porA	SCFA	1	3,044	porA C. sporogenes	POR	60%

No primary metabolite regions were found in these records:: c00001_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_1); c00002_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_2); c00003_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_3); c00004_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_4); c00005_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_5); c00006_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_6); c00008_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_8); c00009_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_9); c00011_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_11); c00012_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_12); c00013_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_13); c00014_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_14); c00015_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_15); c00016_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_16); c00017_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_17); c00018_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_18); c00020_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_20); c00021_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_21); c00022_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_22); c00023_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_23); c00024_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_24); c00025_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_25); c00026_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_26); c00027_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_27); c00028_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_28); c00029_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_29); c00030_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_30); c00032_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_32); c00033_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_33); c00034_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_34); c00035_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_35); c00036_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_36); c00037_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_37); c00038_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_38); c00039_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_39); c00040_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_40); c00041_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_41); c00042_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_42); c00043_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_43); c00045_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_45); c00046_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_46); c00047_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_47); c00048_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_48); c00049_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_49); c00050_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_50); c00051_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_51); c00052_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_52); c00053_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_53); c00054_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_54); c00055_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_55); c00056_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_56); c00057_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_57); c00058_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_58); c00059_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_59); c00060_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_60); c00061_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_61); c00062_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_62); c00063_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_63); c00064_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_64); c00065_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_65); c00066_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_66); c00067_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_67); c00068_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_68); c00069_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_69); c00070_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_70); c00071_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_71); c00072_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_72); c00073_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_73); c00074_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_74); c00075_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_75); c00076_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_76); c00077_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_77); c00078_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_78); c00079_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_79); c00080_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_80); c00081_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_81); c00082_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_82); c00083_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_83); c00084_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_84); c00085_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_85); c00086_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_86); c00087_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_87); c00088_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_88); c00089_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_89); c00090_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_90); c00091_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_91); c00092_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_92); c00093_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_93); c00094_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_94); c00095_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_95); c00096_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_96); c00097_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_97); c00098_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_98); c00099_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_99); c00100_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_100); c00101_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_101); c00102_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_102); c00103_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_103); c00104_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_104); c00105_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_105); c00106_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_106); c00107_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_107); c00108_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_108); c00109_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_109); c00110_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_110); c00111_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_111); c00112_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_112); c00113_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_113); c00114_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_114); c00115_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_115); c00116_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_116); c00117_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_117); c00118_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_118); c00119_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_119); c00120_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_120); c00121_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_121); c00122_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_122); c00123_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_123); c00124_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_124); c00125_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_125); c00126_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_126); c00127_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_127); c00128_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_128); c00129_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_129); c00130_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_130); c00131_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_131); c00132_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_132); c00133_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_133); c00134_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_134); c00135_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_135); c00136_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_136); c00137_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_137); c00138_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_138); c00139_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_139); c00140_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_140); c00141_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_141); c00142_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_142); c00143_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_143); c00144_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_144); c00145_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_145); c00146_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_146); c00147_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_147); c00148_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_148); c00149_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_149); c00150_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_150); c00151_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_151); c00152_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_152); c00153_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_153); c00154_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_154); c00155_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_155); c00156_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_156); c00157_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_157); c00158_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_158); c00159_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_159); c00160_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_160); c00161_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_161); c00162_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_162); c00163_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_163); c00164_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_164); c00165_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_165); c00166_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_166); c00167_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_167); c00169_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_169); c00170_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_170); c00171_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_171); c00172_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_172); c00173_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_173); c00175_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_175); c00176_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_176); c00177_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_177); c00178_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_178); c00179_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_179); c00180_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_180); c00181_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_181); c00182_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_182); c00183_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_183); c00184_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_184); c00185_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_185); c00186_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_186); c00187_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_187); c00188_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_188); c00189_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_189); c00190_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_190); c00191_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_191); c00192_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_192); c00193_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_193); c00194_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_194); c00195_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_195); c00196_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_196); c00197_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_197); c00198_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_198); c00199_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_199); c00200_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_200); c00201_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_201); c00202_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_202); c00203_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_203); c00204_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_204); c00205_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_205); c00206_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_206); c00207_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_207); c00208_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_208); c00209_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_209); c00210_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_210); c00211_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_211); c00212_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_212); c00213_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_213); c00214_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_214); c00215_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_215); c00217_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_217); c00218_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_218); c00219_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_219); c00220_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_220); c00221_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_221); c00222_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_222); c00223_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_223); c00224_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_224); c00225_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_225); c00226_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_226); c00227_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_227); c00228_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_228); c00229_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_229); c00230_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_230); c00231_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_231); c00232_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_232); c00233_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_233); c00234_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_234); c00235_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_235); c00236_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_236); c00237_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_237); c00238_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_238); c00239_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_239); c00240_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_240); c00241_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_241); c00242_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_242); c00243_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_243); c00244_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_244); c00245_gnlPro.. (original name was: gnl|Prokka|ANJMKACL_245)

Compact view

c00007_gnlPro.. - Region 1 - Rnf_complex

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Location: 3,933 - 29,048 nt. (total: 25,116 nt) Show pHMM detection rules used

Rnf_complex: (Complex1_51K and minimum(5, [FMN_bind, FeS, Fer4, Fer4_9, NQR2_RnfD_RnfE, Rnf-Nqr, RnfC_N, SLBB]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00010_gnlPro.. - Region 1 - NADH_dehydrogenase_I

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Location: 9,510 - 32,284 nt. (total: 22,775 nt) Show pHMM detection rules used

Region on contig edge.

NADH_dehydrogenase_I: (Oxidored_q4 and Oxidored_q6 and Complex1_30kDa and Complex1_49kDa and NADHdh and Oxidored_q3 and Oxidored_q2 and minimum(4, [Fe-2S_thioredx, Fer2_4, Fer4_7, Molybdop_Fe4S4, Molydop_binding, NADH-G_4Fe-4S_3, NADH_4Fe-4S, Proton_antipo_M, Proton_antipo_N, SLBB]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

c00019_gnlPro.. - Region 1 - Putrescine2spermidine

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Location: 1 - 22,701 nt. (total: 22,701 nt) Show pHMM detection rules used

Region on contig edge.

Putrescine2spermidine: (minimum(2, [AdoMet_dc, Spermine_synt_N, Spermine_synth]) or (Orn_DAP_Arg_deC and Sacchrp_dh_C))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

c00031_gnlPro.. - Region 1 - Fumarate2succinate

Download region GenBank file

Location: 4,075 - 21,968 nt. (total: 17,894 nt) Show pHMM detection rules used

Region on contig edge.

Fumarate2succinate: (Succ_DH_flav_C and FAD_binding_2 and (Fer2_3 or Fer4_7 or SucD_FumR))

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c00044_gnlPro.. - Region 1 - OD_fatty_acids

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Location: 1 - 16,967 nt. (total: 16,967 nt) Show pHMM detection rules used

Region on contig edge.

OD_fatty_acids: (minimum(1, [PFOR_II, POR, POR_N]) and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (Gly_radical_scatole or Gly_radical or Gly_430_pcre or Gly_8-9_TMA))

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No matches found.

c00168_gnlPro.. - Region 1 - Pyruvate2acetate-formate

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Location: 1 - 5,225 nt. (total: 5,225 nt) Show pHMM detection rules used

Region on contig edge.

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

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c00174_gnlPro.. - Region 1 - TPP_AA_metabolism

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Location: 1 - 5,054 nt. (total: 5,054 nt) Show pHMM detection rules used

Region on contig edge.

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

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c00216_gnlPro.. - Region 1 - porA

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Location: 1 - 3,044 nt. (total: 3,044 nt) Show pHMM detection rules used

Region on contig edge.

porA: (Fer4_7 and TPP_enzyme_C and POR and POR_N and PFOR_II and not (EKR or Fer4_16))

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