## Tue Jul 9 20:44:29 2024 ## emapper-2.1.12 ## /d223NFS/m128030022/anaconda3/envs/eggnog/bin/emapper.py -i /d223NFS/m128030014/NGP/gene_list/prokka_results/GCA_036807025.1/GCA_036807025.1.faa --temp_dir /d223NFS/m128030022/NGPs/NGPs_new/databases/NGPs_DB/NGPs_db/GCA_036807025.1/2.eggNOGmapper --output_dir /d223NFS/m128030022/NGPs/NGPs_new/databases/NGPs_DB/NGPs_db/GCA_036807025.1/2.eggNOGmapper --output eggNOG_out --override --cpu 20 -m diamond --sensmode fast ## #query seed_ortholog evalue score eggNOG_OGs max_annot_lvl COG_category Description Preferred_name GOs EC KEGG_ko KEGG_Pathway KEGG_Module KEGG_Reaction KEGG_rclass BRITE KEGG_TC CAZy BiGG_Reaction PFAMs LIIFOLDO_00001 435591.BDI_2048 1.25e-192 533.0 28U74@1|root,2ZGCS@2|Bacteria,4NN6U@976|Bacteroidetes,2FN7W@200643|Bacteroidia,22XT4@171551|Porphyromonadaceae 976|Bacteroidetes S Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl_2 LIIFOLDO_00002 435591.BDI_2049 2.96e-266 728.0 COG4733@1|root,COG4733@2|Bacteria,4PMY2@976|Bacteroidetes,2G0KB@200643|Bacteroidia 976|Bacteroidetes S Putative carbohydrate metabolism domain - - - - - - - - - - - - PCMD LIIFOLDO_00003 435591.BDI_2050 0.0 920.0 COG0673@1|root,COG0673@2|Bacteria,4NGGS@976|Bacteroidetes,2FTQH@200643|Bacteroidia 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA LIIFOLDO_00004 435591.BDI_2051 0.0 1004.0 COG3172@1|root,COG3172@2|Bacteria,4NEQF@976|Bacteroidetes,2FN8P@200643|Bacteroidia,22WZJ@171551|Porphyromonadaceae 976|Bacteroidetes H NAD metabolism ATPase kinase - - - - - - - - - - - - DUF4301 LIIFOLDO_00005 435591.BDI_2052 0.0 1419.0 COG0317@1|root,COG0317@2|Bacteria,4NESY@976|Bacteroidetes,2FKYN@200643|Bacteroidia,22WCI@171551|Porphyromonadaceae 976|Bacteroidetes KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance relA - 2.7.6.5,3.1.7.2 ko:K00951,ko:K01139 ko00230,map00230 - R00336,R00429 RC00002,RC00078 ko00000,ko00001,ko01000,ko03009 - - - ACT_4,HD_4,RelA_SpoT,TGS LIIFOLDO_00006 435591.BDI_2053 0.0 939.0 COG0617@1|root,COG0617@2|Bacteria,4NF1S@976|Bacteroidetes,2FNMZ@200643|Bacteroidia,22X29@171551|Porphyromonadaceae 976|Bacteroidetes J tRNA nucleotidyltransferase cca - 2.7.7.19,2.7.7.72 ko:K00970,ko:K00974 ko03013,ko03018,map03013,map03018 - R09382,R09383,R09384,R09386 RC00078 ko00000,ko00001,ko01000,ko03016,ko03019 - - - HD,PolyA_pol,PolyA_pol_RNAbd LIIFOLDO_00007 435591.BDI_2054 1.45e-194 541.0 2B18X@1|root,31TPD@2|Bacteria,4NRHN@976|Bacteroidetes,2G2HJ@200643|Bacteroidia,231IT@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00008 203275.BFO_1652 1.56e-06 61.2 2DUTV@1|root,33S7W@2|Bacteria,4P1VI@976|Bacteroidetes,2FWJJ@200643|Bacteroidia,22ZT0@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00010 435591.BDI_2057 1.37e-186 520.0 COG0668@1|root,COG0668@2|Bacteria,4NEPW@976|Bacteroidetes,2G3EE@200643|Bacteroidia,22XH6@171551|Porphyromonadaceae 976|Bacteroidetes M mechanosensitive ion channel - - - ko:K03442 - - - - ko00000,ko02000 1.A.23.2 - - MS_channel,TM_helix LIIFOLDO_00011 435591.BDI_2058 1.85e-108 322.0 COG0457@1|root,COG0457@2|Bacteria,4NPDH@976|Bacteroidetes,2FMNE@200643|Bacteroidia,22Y5K@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat - - - - - - - - - - - - TPR_16,TPR_2,TPR_6,TPR_7,TPR_8 LIIFOLDO_00012 435591.BDI_2059 9.47e-262 716.0 COG0473@1|root,COG0473@2|Bacteria,4NEBE@976|Bacteroidetes,2FNJ0@200643|Bacteroidia,22WT3@171551|Porphyromonadaceae 976|Bacteroidetes C Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate leuB GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 ko:K00052 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 M00432,M00535 R00994,R04426,R10052 RC00084,RC00417,RC03036 br01601,ko00000,ko00001,ko00002,ko01000 - - - Iso_dh LIIFOLDO_00013 435591.BDI_2060 2.87e-106 306.0 COG1803@1|root,COG1803@2|Bacteria,4NQJ9@976|Bacteroidetes,2FPT5@200643|Bacteroidia,22XP7@171551|Porphyromonadaceae 976|Bacteroidetes G methylglyoxal synthase mgsA - 4.2.3.3 ko:K01734 ko00640,ko01120,map00640,map01120 - R01016 RC00424 ko00000,ko00001,ko01000 - - - MGS LIIFOLDO_00014 435591.BDI_2061 0.0 995.0 COG0119@1|root,COG0119@2|Bacteria,4NF3N@976|Bacteroidetes,2FKYJ@200643|Bacteroidia,22WYH@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the alpha-IPM synthase homocitrate synthase family leuA_1 - 2.3.1.182 ko:K09011 ko00290,ko00660,ko01100,ko01210,ko01230,map00290,map00660,map01100,map01210,map01230 M00535 R07399 RC00004,RC01205 br01601,ko00000,ko00001,ko00002,ko01000 - - - HMGL-like,LeuA_dimer LIIFOLDO_00015 435591.BDI_2062 7.6e-139 392.0 COG0066@1|root,COG0066@2|Bacteria,4NDVY@976|Bacteroidetes,2FNIN@200643|Bacteroidia,22W31@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate leuD - 4.2.1.33,4.2.1.35 ko:K01704 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 M00432,M00535 R03896,R03898,R03968,R04001,R10170 RC00976,RC00977,RC01041,RC01046,RC03072 br01601,ko00000,ko00001,ko00002,ko01000 - - - Aconitase_C LIIFOLDO_00016 435591.BDI_2063 0.0 937.0 COG0065@1|root,COG0065@2|Bacteria,4NG7E@976|Bacteroidetes,2FMCX@200643|Bacteroidia,22WNV@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate leuC - 4.2.1.33,4.2.1.35 ko:K01703 ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230 M00432,M00535 R03896,R03898,R03968,R04001,R08620,R08624,R08628,R08634,R08641,R08645,R10170 RC00497,RC00976,RC00977,RC01041,RC01046,RC03072 br01601,ko00000,ko00001,ko00002,ko01000 - - - Aconitase LIIFOLDO_00017 435591.BDI_2064 0.0 971.0 COG0119@1|root,COG0119@2|Bacteria,4NEIT@976|Bacteroidetes,2FNX8@200643|Bacteroidia,22W7V@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) leuA - 2.3.3.13 ko:K01649 ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230 M00432 R01213 RC00004,RC00470,RC02754 br01601,ko00000,ko00001,ko00002,ko01000 - - - HMGL-like,LeuA_dimer LIIFOLDO_00018 435591.BDI_2065 0.0 2170.0 COG5492@1|root,COG5492@2|Bacteria 2|Bacteria N domain, Protein - - - ko:K21471 - - - - ko00000,ko01000,ko01002,ko01011 - - - BACON,Big_2,CBM9_1,CHU_C,Laminin_G_3,Peptidase_M64,SLH,SprB LIIFOLDO_00019 435591.BDI_2066 0.0 2330.0 COG4886@1|root,COG4886@2|Bacteria 2|Bacteria S regulation of response to stimulus - - - - - - - - - - - - Flg_new,LRR_5,LRR_6 LIIFOLDO_00021 435591.BDI_2068 1.21e-75 226.0 COG3668@1|root,COG3668@2|Bacteria,4P829@976|Bacteroidetes 976|Bacteroidetes S ParE toxin of type II toxin-antitoxin system, parDE - - - - - - - - - - - - ParE_toxin LIIFOLDO_00022 435591.BDI_2069 2.9e-253 694.0 COG0059@1|root,COG0059@2|Bacteria,4NFYV@976|Bacteroidetes,2FN0U@200643|Bacteroidia,22W57@171551|Porphyromonadaceae 976|Bacteroidetes E Ketol-acid reductoisomerase ilvC - 1.1.1.86 ko:K00053 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R03051,R04439,R04440,R05068,R05069,R05071 RC00726,RC00836,RC00837,RC01726 ko00000,ko00001,ko00002,ko01000 - - - IlvC,IlvN LIIFOLDO_00023 435591.BDI_2070 1.51e-179 499.0 COG3884@1|root,COG3884@2|Bacteria,4NMMY@976|Bacteroidetes,2FQ43@200643|Bacteroidia,22Y3B@171551|Porphyromonadaceae 976|Bacteroidetes I Acyl-ACP thioesterase - - 3.1.2.21 ko:K01071 ko00061,ko01100,map00061,map01100 - R04014,R08157,R08158 RC00014,RC00039 ko00000,ko00001,ko01000,ko01004 - - - Acyl-ACP_TE LIIFOLDO_00024 435591.BDI_2071 6.53e-121 346.0 COG0440@1|root,COG0440@2|Bacteria,4NIDK@976|Bacteroidetes,2FNQ4@200643|Bacteroidia,22XTP@171551|Porphyromonadaceae 976|Bacteroidetes E synthase small subunit ilvN - 2.2.1.6 ko:K01653 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R00006,R00014,R00226,R03050,R04672,R04673,R08648 RC00027,RC00106,RC01192,RC02744,RC02893 ko00000,ko00001,ko00002,ko01000 - - - ACT,ACT_5,ALS_ss_C LIIFOLDO_00025 435591.BDI_2072 0.0 1116.0 COG0028@1|root,COG0028@2|Bacteria,4NENG@976|Bacteroidetes,2FMMH@200643|Bacteroidia,22WKA@171551|Porphyromonadaceae 976|Bacteroidetes H Acetolactate synthase, large subunit ilvB - 2.2.1.6 ko:K01652 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R00006,R00014,R00226,R03050,R04672,R04673,R08648 RC00027,RC00106,RC01192,RC02744,RC02893 ko00000,ko00001,ko00002,ko01000 - - - TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N LIIFOLDO_00026 435591.BDI_2073 0.0 1203.0 COG0129@1|root,COG0129@2|Bacteria,4NFHP@976|Bacteroidetes,2FMCC@200643|Bacteroidia,22WXM@171551|Porphyromonadaceae 976|Bacteroidetes EG Belongs to the IlvD Edd family ilvD - 4.2.1.9 ko:K01687 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R01209,R04441,R05070 RC00468,RC01714 ko00000,ko00001,ko00002,ko01000 - - - ILVD_EDD LIIFOLDO_00028 435591.BDI_2080 1.64e-294 803.0 COG1168@1|root,COG1168@2|Bacteria,4NETH@976|Bacteroidetes,2FMIZ@200643|Bacteroidia,22WVZ@171551|Porphyromonadaceae 976|Bacteroidetes E Aminotransferase class I and II patB - 4.4.1.8 ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 - R00782,R01286,R02408,R04941 RC00056,RC00069,RC00382,RC00488,RC00710,RC01245,RC02303 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 LIIFOLDO_00029 435591.BDI_2081 1.32e-137 389.0 COG1047@1|root,COG1047@2|Bacteria,4NM29@976|Bacteroidetes,2FM08@200643|Bacteroidia,22XMB@171551|Porphyromonadaceae 976|Bacteroidetes O Peptidyl-prolyl cis-trans isomerase slyD - 5.2.1.8 ko:K03775 - - - - ko00000,ko01000,ko03110 - - - FKBP_C LIIFOLDO_00030 435591.BDI_2082 3.44e-262 717.0 COG0082@1|root,COG0082@2|Bacteria,4NDXJ@976|Bacteroidetes,2FNGP@200643|Bacteroidia,22VVQ@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system aroC GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 ko:K01736 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R01714 RC00586 ko00000,ko00001,ko00002,ko01000 - - - Chorismate_synt LIIFOLDO_00031 435591.BDI_2083 2.08e-66 202.0 COG2076@1|root,COG2076@2|Bacteria,4NQ4U@976|Bacteroidetes,2FTW0@200643|Bacteroidia,22YGF@171551|Porphyromonadaceae 976|Bacteroidetes P Small Multidrug Resistance protein sugE - - ko:K11741 - - - - ko00000,ko02000 2.A.7.1 - - Multi_Drug_Res LIIFOLDO_00032 435591.BDI_2084 1.82e-107 310.0 COG1576@1|root,COG1576@2|Bacteria,4NMFP@976|Bacteroidetes,2FN6G@200643|Bacteroidia,22XQY@171551|Porphyromonadaceae 976|Bacteroidetes J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA rlmH - 2.1.1.177 ko:K00783 - - - - ko00000,ko01000,ko03009 - - - SPOUT_MTase LIIFOLDO_00033 435591.BDI_2085 2.17e-76 228.0 2E4AG@1|root,32Z66@2|Bacteria,4NUXA@976|Bacteroidetes,2FSMC@200643|Bacteroidia,22YXI@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4783) - - - - - - - - - - - - DUF4783 LIIFOLDO_00034 435591.BDI_2086 4.16e-196 544.0 COG0157@1|root,COG0157@2|Bacteria,4NDXF@976|Bacteroidetes,2FMJM@200643|Bacteroidia,22X4A@171551|Porphyromonadaceae 976|Bacteroidetes H Belongs to the NadC ModD family nadC - 2.4.2.19 ko:K00767 ko00760,ko01100,map00760,map01100 M00115 R03348 RC02877 ko00000,ko00001,ko00002,ko01000 - - - QRPTase_C,QRPTase_N LIIFOLDO_00035 435591.BDI_2087 0.0 935.0 COG1012@1|root,COG1012@2|Bacteria,4NEB7@976|Bacteroidetes,2G2XR@200643|Bacteroidia,231K4@171551|Porphyromonadaceae 976|Bacteroidetes C Aldehyde dehydrogenase family - - 1.2.1.21,1.2.1.22 ko:K07248 ko00620,ko00630,ko01120,map00620,map00630,map01120 - R00203,R01333,R01446 RC00080,RC00104,RC00242 ko00000,ko00001,ko01000 - - - Aldedh LIIFOLDO_00036 435591.BDI_2088 0.0 1127.0 COG2812@1|root,COG2812@2|Bacteria,4NE8A@976|Bacteroidetes,2FN52@200643|Bacteroidia,22W32@171551|Porphyromonadaceae 976|Bacteroidetes H DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity dnaX - 2.7.7.7 ko:K02343 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_delta2,DNA_pol3_gamma3 LIIFOLDO_00037 435591.BDI_2089 4.85e-65 198.0 COG2919@1|root,COG2919@2|Bacteria,4NURQ@976|Bacteroidetes,2FTC0@200643|Bacteroidia,22YWW@171551|Porphyromonadaceae 976|Bacteroidetes D Septum formation initiator - - - - - - - - - - - - DivIC LIIFOLDO_00038 435591.BDI_2090 6.94e-70 211.0 2EAHC@1|root,334KJ@2|Bacteria,4NWVD@976|Bacteroidetes,2FUJ8@200643|Bacteroidia,22YTX@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location CytoplasmicMembrane, score - - - - - - - - - - - - - LIIFOLDO_00039 435591.BDI_2091 8.03e-128 365.0 COG2825@1|root,COG2825@2|Bacteria,4NQGG@976|Bacteroidetes,2FPTR@200643|Bacteroidia,22Y4J@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane protein (OmpH-like) - - - ko:K06142 - - - - ko00000 - - - OmpH LIIFOLDO_00040 411477.PARMER_00756 5.31e-22 87.4 2EIGM@1|root,33C80@2|Bacteria,4NXRF@976|Bacteroidetes,2FUCC@200643|Bacteroidia,22YXT@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG35566 non supervised orthologous group - - - - - - - - - - - - - LIIFOLDO_00041 435591.BDI_2092 0.0 980.0 COG2195@1|root,COG2195@2|Bacteria,4NG8I@976|Bacteroidetes,2FNVV@200643|Bacteroidia,22VWR@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the hydrolysis of Xaa-His dipeptides - - - ko:K01270 ko00480,ko01100,map00480,map01100 - R00899,R04951 RC00096,RC00141 ko00000,ko00001,ko01000,ko01002 - - - M20_dimer,Peptidase_M20 LIIFOLDO_00042 435591.BDI_2093 0.0 989.0 2DB82@1|root,2Z7PX@2|Bacteria,4NEW5@976|Bacteroidetes,2FMDV@200643|Bacteroidia,22W0B@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - Beta_helix LIIFOLDO_00043 435591.BDI_2094 1.51e-260 712.0 COG2374@1|root,COG2374@2|Bacteria,4NEHG@976|Bacteroidetes,2FP9S@200643|Bacteroidia,22X52@171551|Porphyromonadaceae 976|Bacteroidetes S Endonuclease exonuclease phosphatase family - - - - - - - - - - - - Exo_endo_phos LIIFOLDO_00044 435591.BDI_2095 4.9e-158 442.0 COG0259@1|root,COG0259@2|Bacteria,4NFH7@976|Bacteroidetes,2FPCK@200643|Bacteroidia,22XVW@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) pdxH - 1.4.3.5 ko:K00275 ko00750,ko01100,ko01120,map00750,map01100,map01120 M00124 R00277,R00278,R01710,R01711 RC00048,RC00116 ko00000,ko00001,ko00002,ko01000 - - - PNP_phzG_C,Putative_PNPOx LIIFOLDO_00045 435591.BDI_2096 0.0 1150.0 COG0739@1|root,COG0739@2|Bacteria,4NED7@976|Bacteroidetes,2FP3N@200643|Bacteroidia,22XF3@171551|Porphyromonadaceae 976|Bacteroidetes M Peptidase family M23 - - - - - - - - - - - - Peptidase_M23 LIIFOLDO_00046 435591.BDI_2097 0.0 1145.0 COG1109@1|root,COG1109@2|Bacteria,4NFU7@976|Bacteroidetes,2FM0A@200643|Bacteroidia,22WB1@171551|Porphyromonadaceae 976|Bacteroidetes G Phosphoglucomutase pgcA - 5.4.2.2 ko:K01835 ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 M00549 R00959,R01057,R08639 RC00408 ko00000,ko00001,ko00002,ko01000 - - - PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV LIIFOLDO_00047 435591.BDI_2098 2.91e-109 314.0 COG0295@1|root,COG0295@2|Bacteria,4NQED@976|Bacteroidetes,2FTBD@200643|Bacteroidia,22Y69@171551|Porphyromonadaceae 976|Bacteroidetes F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis cdd - 3.5.4.5 ko:K01489 ko00240,ko00983,ko01100,map00240,map00983,map01100 - R01878,R02485,R08221 RC00074,RC00514 ko00000,ko00001,ko01000 - - - dCMP_cyt_deam_1 LIIFOLDO_00048 435591.BDI_2099 2.22e-173 483.0 COG2227@1|root,COG2227@2|Bacteria,4PKW0@976|Bacteroidetes,2FNGZ@200643|Bacteroidia,22ZEA@171551|Porphyromonadaceae 976|Bacteroidetes H Methyltransferase domain cypM_1 - - - - - - - - - - - Methyltransf_11,Methyltransf_23,Methyltransf_25,Methyltransf_31 LIIFOLDO_00049 435591.BDI_2100 4.98e-220 606.0 COG1388@1|root,COG1705@1|root,COG1388@2|Bacteria,COG1705@2|Bacteria,4NEER@976|Bacteroidetes,2FM02@200643|Bacteroidia,22W5G@171551|Porphyromonadaceae 976|Bacteroidetes MNU N-acetylmuramoyl-L-alanine amidase lytG - - - - - - - - - - - Glucosaminidase,LysM LIIFOLDO_00050 435591.BDI_2101 1.71e-284 776.0 COG0150@1|root,COG0150@2|Bacteria,4NE4E@976|Bacteroidetes,2FM0G@200643|Bacteroidia,22VWI@171551|Porphyromonadaceae 976|Bacteroidetes F Phosphoribosylformylglycinamidine cyclo-ligase purM - 6.3.3.1 ko:K01933 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04208 RC01100 ko00000,ko00001,ko00002,ko01000 - - - AIRS,AIRS_C LIIFOLDO_00051 435591.BDI_2102 4.9e-263 721.0 COG0216@1|root,COG0216@2|Bacteria,4NF72@976|Bacteroidetes,2FNKW@200643|Bacteroidia,22VUT@171551|Porphyromonadaceae 976|Bacteroidetes J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA prfA - - ko:K02835 - - - - ko00000,ko03012 - - - PCRF,RF-1 LIIFOLDO_00052 435591.BDI_2103 2.52e-202 560.0 COG0284@1|root,COG0284@2|Bacteria,4NE12@976|Bacteroidetes,2FPJM@200643|Bacteroidia,22W6B@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the OMP decarboxylase family. Type 2 subfamily pyrF GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 ko:K01591 ko00240,ko01100,map00240,map01100 M00051 R00965 RC00409 ko00000,ko00001,ko00002,ko01000 - - - OMPdecase LIIFOLDO_00053 435591.BDI_2104 1.08e-165 473.0 COG1044@1|root,COG1044@2|Bacteria,4NE5G@976|Bacteroidetes,2FMZE@200643|Bacteroidia,22WC5@171551|Porphyromonadaceae 976|Bacteroidetes M Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell lpxD - 2.3.1.191 ko:K02536 ko00540,ko01100,map00540,map01100 M00060 R04550 RC00039,RC00166 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Hexapep,Hexapep_2,LpxD LIIFOLDO_00054 435591.BDI_2105 0.0 911.0 COG0764@1|root,COG0774@1|root,COG0764@2|Bacteria,COG0774@2|Bacteria,4NEJ3@976|Bacteroidetes,2FM6X@200643|Bacteroidia,22X7C@171551|Porphyromonadaceae 976|Bacteroidetes IM Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis fabZ - 3.5.1.108,4.2.1.59 ko:K16363 ko00061,ko00540,ko01100,ko01212,map00061,map00540,map01100,map01212 M00060,M00083 R04428,R04535,R04537,R04544,R04568,R04587,R04954,R04965 RC00166,RC00300,RC00831,RC01095 ko00000,ko00001,ko00002,ko01000,ko01004,ko01005 - - - FabA,LpxC LIIFOLDO_00055 435591.BDI_2106 4.16e-125 363.0 COG1043@1|root,COG1043@2|Bacteria,4NEBA@976|Bacteroidetes,2FKYH@200643|Bacteroidia,22WE5@171551|Porphyromonadaceae 976|Bacteroidetes M Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell lpxA - 2.3.1.129 ko:K00677 ko00540,ko01100,ko01503,map00540,map01100,map01503 M00060 R04567 RC00039,RC00055 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Acetyltransf_11,Hexapep LIIFOLDO_00056 435591.BDI_2107 7.99e-85 254.0 COG5464@1|root,COG5464@2|Bacteria,4NGSI@976|Bacteroidetes,2FN70@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - PDDEXK_2 LIIFOLDO_00057 435591.BDI_2108 4.98e-47 151.0 COG5464@1|root,COG5464@2|Bacteria,4NGSI@976|Bacteroidetes,2FN70@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - PDDEXK_2 LIIFOLDO_00058 1122931.AUAE01000017_gene4308 9.15e-51 166.0 COG0776@1|root,COG0776@2|Bacteria,4NTYU@976|Bacteroidetes,2FRNV@200643|Bacteroidia,231EN@171551|Porphyromonadaceae 976|Bacteroidetes L Bacterial DNA-binding protein - - - - - - - - - - - - Bac_DNA_binding LIIFOLDO_00060 435591.BDI_2410 0.0 1816.0 COG5492@1|root,COG5492@2|Bacteria,4PKTM@976|Bacteroidetes,2G048@200643|Bacteroidia,22ZZ6@171551|Porphyromonadaceae 976|Bacteroidetes N Bacterial Ig-like domain 2 - - - - - - - - - - - - Big_2 LIIFOLDO_00061 435591.BDI_2110 7.36e-128 363.0 29CCT@1|root,2ZZB9@2|Bacteria,4NM9K@976|Bacteroidetes,2FNRJ@200643|Bacteroidia,22Y1R@171551|Porphyromonadaceae 976|Bacteroidetes S Plasmid pRiA4b ORF-3-like protein - - - - - - - - - - - - PRiA4_ORF3 LIIFOLDO_00062 435591.BDI_2111 2.19e-217 599.0 COG0324@1|root,COG0324@2|Bacteria,4NEAE@976|Bacteroidetes,2FNES@200643|Bacteroidia,22WDD@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) miaA GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 - R01122 RC02820 ko00000,ko00001,ko01000,ko01006,ko03016 - - - IPPT LIIFOLDO_00063 435591.BDI_2112 8.85e-85 249.0 COG3169@1|root,COG3169@2|Bacteria,4NQH4@976|Bacteroidetes,2FT44@200643|Bacteroidia,22Y4C@171551|Porphyromonadaceae 976|Bacteroidetes S Putative member of DMT superfamily (DUF486) - - - ko:K09922 - - - - ko00000 - - - DMT_6 LIIFOLDO_00064 435591.BDI_2113 4.87e-184 511.0 COG0037@1|root,COG0037@2|Bacteria,4NIQB@976|Bacteroidetes,2FP5K@200643|Bacteroidia,22X1Q@171551|Porphyromonadaceae 976|Bacteroidetes H Belongs to the TtcA family ttcA - - ko:K14058 - - - - ko00000,ko03016 - - - ATP_bind_3 LIIFOLDO_00065 435591.BDI_2114 0.0 958.0 COG0457@1|root,COG0457@2|Bacteria,4NHH0@976|Bacteroidetes,2FP90@200643|Bacteroidia,22WWE@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat protein - - - - - - - - - - - - PD40,TPR_16 LIIFOLDO_00066 435591.BDI_2115 5.54e-100 291.0 COG1030@1|root,COG1030@2|Bacteria,4NW09@976|Bacteroidetes,2FRYF@200643|Bacteroidia,22YD4@171551|Porphyromonadaceae 976|Bacteroidetes O NfeD-like C-terminal, partner-binding - - - - - - - - - - - - NfeD LIIFOLDO_00067 435591.BDI_2116 1.94e-206 574.0 COG4864@1|root,COG4864@2|Bacteria,4NGG6@976|Bacteroidetes,2FPNC@200643|Bacteroidia,22WRB@171551|Porphyromonadaceae 976|Bacteroidetes S UPF0365 protein - - - - - - - - - - - - YdfA_immunity LIIFOLDO_00068 435591.BDI_2117 4.05e-208 575.0 COG2820@1|root,COG2820@2|Bacteria,4NG5S@976|Bacteroidetes,2FM75@200643|Bacteroidia,22W39@171551|Porphyromonadaceae 976|Bacteroidetes F phosphorylase udp - 2.4.2.3 ko:K00757 ko00240,ko00983,ko01100,map00240,map00983,map01100 - R01876,R02484,R08229 RC00063 ko00000,ko00001,ko01000 - - - PNP_UDP_1 LIIFOLDO_00069 435591.BDI_2118 1.61e-10 59.7 COG0120@1|root,COG0120@2|Bacteria,4NMB9@976|Bacteroidetes,2FPDP@200643|Bacteroidia,23005@171551|Porphyromonadaceae 976|Bacteroidetes G Ribose 5-phosphate isomerase A (phosphoriboisomerase A) rpiA - 5.3.1.6 ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007,M00165,M00167,M00580 R01056 RC00434 ko00000,ko00001,ko00002,ko01000 - - - Rib_5-P_isom_A LIIFOLDO_00070 435591.BDI_2118 1.17e-19 84.3 COG0120@1|root,COG0120@2|Bacteria,4NMB9@976|Bacteroidetes,2FPDP@200643|Bacteroidia,23005@171551|Porphyromonadaceae 976|Bacteroidetes G Ribose 5-phosphate isomerase A (phosphoriboisomerase A) rpiA - 5.3.1.6 ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007,M00165,M00167,M00580 R01056 RC00434 ko00000,ko00001,ko00002,ko01000 - - - Rib_5-P_isom_A LIIFOLDO_00071 435591.BDI_2119 1.09e-171 479.0 COG0778@1|root,COG0778@2|Bacteria,4NJ80@976|Bacteroidetes,2FNX6@200643|Bacteroidia,22XFS@171551|Porphyromonadaceae 976|Bacteroidetes C Nitroreductase family - - 1.5.1.38,1.5.1.39 ko:K19285,ko:K19286 ko00740,ko01100,map00740,map01100 - R05705,R05706 RC00126 ko00000,ko00001,ko01000 - - - Nitroreductase LIIFOLDO_00072 435591.BDI_2120 8.31e-293 799.0 COG1373@1|root,COG1373@2|Bacteria,4NE3E@976|Bacteroidetes,2FP33@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - ko:K07133 - - - - ko00000 - - - AAA_14 LIIFOLDO_00073 435591.BDI_2121 1.77e-262 719.0 COG2768@1|root,COG2768@2|Bacteria,4NGYC@976|Bacteroidetes,2FPAI@200643|Bacteroidia,22X67@171551|Porphyromonadaceae 976|Bacteroidetes C Domain of unknown function (DUF362) - - - ko:K07138 - - - - ko00000 - - - DUF362,Fer4 LIIFOLDO_00074 435591.BDI_2122 0.0 884.0 COG0486@1|root,COG0486@2|Bacteria,4NECT@976|Bacteroidetes,2FMER@200643|Bacteroidia,22WKU@171551|Porphyromonadaceae 976|Bacteroidetes S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 mnmE - - ko:K03650 - - R08701 RC00053,RC00209,RC00870 ko00000,ko01000,ko03016 - - - MMR_HSR1,MnmE_helical,TrmE_N LIIFOLDO_00075 742817.HMPREF9449_00085 1.47e-59 183.0 2F8HM@1|root,340WF@2|Bacteria,4P4Q7@976|Bacteroidetes,2FTJM@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00077 1121129.KB903359_gene1089 4.29e-197 548.0 COG3550@1|root,COG3550@2|Bacteria,4NG6N@976|Bacteroidetes,2FMN8@200643|Bacteroidia,22VZC@171551|Porphyromonadaceae 976|Bacteroidetes S Pfam:HipA_N - - 2.7.11.1 ko:K07154 - - - - ko00000,ko01000,ko01001,ko02048 - - - HipA_C LIIFOLDO_00078 1121129.KB903359_gene1090 3.11e-73 219.0 COG3550@1|root,COG3550@2|Bacteria,4NTCR@976|Bacteroidetes,2FU8R@200643|Bacteroidia,22YGM@171551|Porphyromonadaceae 976|Bacteroidetes S HipA N-terminal domain - - 2.7.11.1 ko:K07154 - - - - ko00000,ko01000,ko01001,ko02048 - - - Couple_hipA LIIFOLDO_00079 1077285.AGDG01000022_gene1191 7.8e-38 127.0 COG3620@1|root,COG3620@2|Bacteria,4NV6Z@976|Bacteroidetes,2FUN7@200643|Bacteroidia,4ASIA@815|Bacteroidaceae 976|Bacteroidetes K transcriptional regulator, y4mF family - - - - - - - - - - - - HTH_3,HTH_31 LIIFOLDO_00081 435591.BDI_2161 2.44e-155 443.0 COG1409@1|root,COG1409@2|Bacteria,4NNCZ@976|Bacteroidetes,2FPNW@200643|Bacteroidia,22WHD@171551|Porphyromonadaceae 976|Bacteroidetes S Calcineurin-like phosphoesterase - - - - - - - - - - - - Metallophos LIIFOLDO_00082 435591.BDI_2162 3.94e-144 405.0 COG4186@1|root,COG4186@2|Bacteria,4NMM1@976|Bacteroidetes,2FNPX@200643|Bacteroidia,22XJ2@171551|Porphyromonadaceae 976|Bacteroidetes S Calcineurin-like phosphoesterase superfamily domain - - - - - - - - - - - - Metallophos,Metallophos_2 LIIFOLDO_00083 1235803.C825_01594 7.96e-16 70.1 2ES6V@1|root,33JRM@2|Bacteria,4P9Q0@976|Bacteroidetes,2FV8T@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00084 435591.BDI_2165 6.22e-146 410.0 COG0693@1|root,COG0693@2|Bacteria,4NKD1@976|Bacteroidetes,2FPMS@200643|Bacteroidia,22Y9J@171551|Porphyromonadaceae 976|Bacteroidetes S DJ-1/PfpI family - - - - - - - - - - - - DJ-1_PfpI LIIFOLDO_00085 435591.BDI_2166 0.0 1377.0 COG5545@1|root,COG5545@2|Bacteria,4NZWD@976|Bacteroidetes,2G30T@200643|Bacteroidia 976|Bacteroidetes S Domain of unknonw function from B. Theta Gene description (DUF3874) - - - - - - - - - - - - DUF3874,VirE,VirE_N LIIFOLDO_00086 435591.BDI_2167 3.57e-102 295.0 2DWZ4@1|root,342MK@2|Bacteria,4P4DY@976|Bacteroidetes,2FT7K@200643|Bacteroidia,230NB@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00087 999419.HMPREF1077_02722 0.0 1860.0 COG0610@1|root,COG0610@2|Bacteria,4NFJ8@976|Bacteroidetes,2FMP6@200643|Bacteroidia,22XGG@171551|Porphyromonadaceae 976|Bacteroidetes V Subunit R is required for both nuclease and ATPase activities, but not for modification hsdR - 3.1.21.3 ko:K01153 - - - - ko00000,ko01000,ko02048 - - - EcoR124_C,HSDR_N,ResIII LIIFOLDO_00088 1161902.HMPREF0378_0486 4.76e-101 311.0 COG0732@1|root,COG0732@2|Bacteria,1V88S@1239|Firmicutes 1239|Firmicutes L Type I restriction modification DNA specificity domain - - - - - - - - - - - - Methylase_S LIIFOLDO_00089 999419.HMPREF1077_02724 1.16e-266 730.0 COG1131@1|root,COG1131@2|Bacteria,4NH9G@976|Bacteroidetes,2FTKA@200643|Bacteroidia,22Z7H@171551|Porphyromonadaceae 976|Bacteroidetes V AAA domain - - - - - - - - - - - - AAA_13 LIIFOLDO_00090 999419.HMPREF1077_02725 0.0 1061.0 COG0286@1|root,COG0286@2|Bacteria,4NGGB@976|Bacteroidetes,2FPN7@200643|Bacteroidia,22WK5@171551|Porphyromonadaceae 976|Bacteroidetes L HsdM N-terminal domain hsdM - 2.1.1.72 ko:K03427 - - - - ko00000,ko01000,ko02048 - - - HsdM_N,N6_Mtase LIIFOLDO_00091 435591.BDI_0689 8.05e-178 495.0 COG0095@1|root,COG0095@2|Bacteria,4NE5F@976|Bacteroidetes,2FMDJ@200643|Bacteroidia,23090@171551|Porphyromonadaceae 976|Bacteroidetes H Lipoate-protein ligase lplA - 6.3.1.20 ko:K03800 ko00785,ko01100,map00785,map01100 - R07770,R07771,R11143 RC00043,RC00070,RC00090,RC00992,RC02896 ko00000,ko00001,ko01000 - - - BPL_LplA_LipB,Lip_prot_lig_C LIIFOLDO_00092 435591.BDI_0690 0.0 882.0 COG1249@1|root,COG1249@2|Bacteria,4NDVC@976|Bacteroidetes,2FM8Y@200643|Bacteroidia,22WRR@171551|Porphyromonadaceae 976|Bacteroidetes C Dihydrolipoyl dehydrogenase lpdA - 1.8.1.4 ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00036,M00307,M00532 R00209,R01221,R01698,R03815,R07618,R08549 RC00004,RC00022,RC00583,RC02742,RC02833,RC02834 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 - - - Pyr_redox_2,Pyr_redox_dim LIIFOLDO_00093 435591.BDI_0691 8.75e-146 410.0 COG3560@1|root,COG3560@2|Bacteria,4NJPC@976|Bacteroidetes,2FMUS@200643|Bacteroidia,22XJ1@171551|Porphyromonadaceae 976|Bacteroidetes S Nitroreductase family - - - ko:K07078 - - - - ko00000 - - - Nitroreductase LIIFOLDO_00094 435591.BDI_0692 1.8e-50 159.0 COG0227@1|root,COG0227@2|Bacteria,4NS7Q@976|Bacteroidetes,2FTTQ@200643|Bacteroidia,22YGD@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the bacterial ribosomal protein bL28 family rpmB GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - ko:K02902 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L28 LIIFOLDO_00095 1235803.C825_04915 1.58e-27 99.8 2E359@1|root,32Y58@2|Bacteria,4NUXM@976|Bacteroidetes,2FUJX@200643|Bacteroidia,22YQ0@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4295) - - - - - - - - - - - - DUF4295 LIIFOLDO_00096 435591.BDI_0694 2.42e-261 717.0 COG0592@1|root,COG0592@2|Bacteria,4NESB@976|Bacteroidetes,2FMPF@200643|Bacteroidia,22X93@171551|Porphyromonadaceae 976|Bacteroidetes L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria dnaN - 2.7.7.7 ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_beta,DNA_pol3_beta_2,DNA_pol3_beta_3 LIIFOLDO_00097 435591.BDI_0695 6.92e-188 521.0 COG0847@1|root,COG0847@2|Bacteria,4NE82@976|Bacteroidetes,2FMQF@200643|Bacteroidia,22WYR@171551|Porphyromonadaceae 976|Bacteroidetes L DNA polymerase III subunit epsilon dnaQ - 2.7.7.7 ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - RNase_T LIIFOLDO_00098 435591.BDI_0696 1.02e-278 761.0 COG1979@1|root,COG1979@2|Bacteria,4NF1D@976|Bacteroidetes,2FPAW@200643|Bacteroidia,22W7C@171551|Porphyromonadaceae 976|Bacteroidetes C alcohol dehydrogenase yqhD - - ko:K08325 ko00640,map00640 - R02528 RC00739 ko00000,ko00001,ko01000 - - - Fe-ADH LIIFOLDO_00099 435591.BDI_0697 3.88e-283 774.0 COG0452@1|root,COG0452@2|Bacteria,4NE46@976|Bacteroidetes,2FNDG@200643|Bacteroidia,22X4T@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine coaBC - 4.1.1.36,6.3.2.5 ko:K13038 ko00770,ko01100,map00770,map01100 M00120 R03269,R04231 RC00064,RC00090,RC00822 ko00000,ko00001,ko00002,ko01000 - - - DFP,Flavoprotein LIIFOLDO_00100 435591.BDI_0698 3.63e-218 602.0 28HA8@1|root,2Z7MQ@2|Bacteria,4NEJD@976|Bacteroidetes,2FP92@200643|Bacteroidia,22WNR@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4835) - - - - - - - - - - - - DUF4835 LIIFOLDO_00101 435591.BDI_0699 0.0 1029.0 COG0497@1|root,COG0497@2|Bacteria,4NE3I@976|Bacteroidetes,2FMIG@200643|Bacteroidia,22W29@171551|Porphyromonadaceae 976|Bacteroidetes L May be involved in recombinational repair of damaged DNA recN - - ko:K03631 - - - - ko00000,ko03400 - - - SMC_N LIIFOLDO_00103 226186.BT_1076 2.56e-121 353.0 COG3279@1|root,COG3279@2|Bacteria,4NGBF@976|Bacteroidetes,2FMKB@200643|Bacteroidia,4ANGK@815|Bacteroidaceae 976|Bacteroidetes K LytTr DNA-binding domain protein - - - ko:K02477 - - - - ko00000,ko02022 - - - LytTR,Response_reg LIIFOLDO_00104 435591.BDI_0703 3.75e-244 671.0 COG2972@1|root,COG2972@2|Bacteria,4NFDP@976|Bacteroidetes,2FPUC@200643|Bacteroidia,22YGS@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase - - - - - - - - - - - - His_kinase LIIFOLDO_00105 435591.BDI_0704 2.57e-308 841.0 COG1538@1|root,COG1538@2|Bacteria,4NKK6@976|Bacteroidetes,2FM1A@200643|Bacteroidia 976|Bacteroidetes MU Psort location OuterMembrane, score - - - - - - - - - - - - OEP LIIFOLDO_00106 435591.BDI_0705 0.0 1891.0 COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,2FMG1@200643|Bacteroidia,22W2A@171551|Porphyromonadaceae 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - - - - - - - - - - ACR_tran LIIFOLDO_00107 435591.BDI_0706 8.84e-243 667.0 COG0845@1|root,COG0845@2|Bacteria,4NWC8@976|Bacteroidetes,2FMAM@200643|Bacteroidia 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - - - - - - - - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 LIIFOLDO_00108 435591.BDI_0707 3.34e-138 390.0 COG1435@1|root,COG1435@2|Bacteria,4NE5R@976|Bacteroidetes,2FN2K@200643|Bacteroidia,22W1X@171551|Porphyromonadaceae 976|Bacteroidetes F thymidine kinase tdk GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 ko:K00857 ko00240,ko00983,ko01100,map00240,map00983,map01100 - R01567,R02099,R08233 RC00002,RC00017 ko00000,ko00001,ko01000 - - - TK LIIFOLDO_00109 435591.BDI_0708 2.63e-164 461.0 COG0566@1|root,COG0566@2|Bacteria,4NF6H@976|Bacteroidetes,2FMSI@200643|Bacteroidia,22X8Y@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family trmH - 2.1.1.185 ko:K03218,ko:K03437 - - - - ko00000,ko01000,ko03009,ko03016 - - - SpoU_methylase,SpoU_sub_bind LIIFOLDO_00110 435591.BDI_0709 1.45e-80 239.0 COG0251@1|root,COG0251@2|Bacteria,4NQ8M@976|Bacteroidetes,2FT8J@200643|Bacteroidia,22YB1@171551|Porphyromonadaceae 976|Bacteroidetes J Has endoribonuclease activity on mRNA - - 3.5.99.10 ko:K09022 - - R11098,R11099 RC03275,RC03354 ko00000,ko01000 - - - Ribonuc_L-PSP LIIFOLDO_00111 435591.BDI_0710 0.0 1231.0 COG1032@1|root,COG1032@2|Bacteria,4NGYA@976|Bacteroidetes,2FKYB@200643|Bacteroidia,22WXC@171551|Porphyromonadaceae 976|Bacteroidetes C UPF0313 protein - - - - - - - - - - - - DUF3362,Radical_SAM,Radical_SAM_N LIIFOLDO_00112 435591.BDI_0711 7.56e-242 664.0 COG0039@1|root,COG0039@2|Bacteria,4NEJ7@976|Bacteroidetes,2FNZ4@200643|Bacteroidia,22VZT@171551|Porphyromonadaceae 976|Bacteroidetes C Belongs to the LDH MDH superfamily mdh - 1.1.1.37 ko:K00024 ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00012,M00168,M00173,M00346,M00374,M00620,M00740 R00342,R07136 RC00031 ko00000,ko00001,ko00002,ko01000 - - - Ldh_1_C,Ldh_1_N LIIFOLDO_00113 435591.BDI_0712 2.34e-275 755.0 COG0599@1|root,COG1359@1|root,COG0599@2|Bacteria,COG1359@2|Bacteria,4NH7X@976|Bacteroidetes,2G2QM@200643|Bacteroidia,22WBI@171551|Porphyromonadaceae 976|Bacteroidetes S Carboxymuconolactone decarboxylase family - - 4.1.1.44 ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 - R03470 RC00938 ko00000,ko00001,ko01000 - - - ABM,CMD,Cupin_2 LIIFOLDO_00114 435591.BDI_0713 0.0 1664.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,4NJW1@976|Bacteroidetes,2FNET@200643|Bacteroidia,22WN6@171551|Porphyromonadaceae 976|Bacteroidetes EU Peptidase, S9A B C family, catalytic domain protein - - - - - - - - - - - - PD40,Peptidase_S9 LIIFOLDO_00115 435591.BDI_0714 3.23e-139 393.0 COG0500@1|root,COG2226@2|Bacteria,4NV0Z@976|Bacteroidetes,2FV9K@200643|Bacteroidia,22YVQ@171551|Porphyromonadaceae 976|Bacteroidetes Q Mycolic acid cyclopropane synthetase - - - - - - - - - - - - Methyltransf_11,Methyltransf_23,Methyltransf_31 LIIFOLDO_00116 435591.BDI_0715 2.33e-198 549.0 COG1947@1|root,COG1947@2|Bacteria,4NGFC@976|Bacteroidetes,2FM2B@200643|Bacteroidia,22X69@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol ispE GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 ko:K00919 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05634 RC00002,RC01439 ko00000,ko00001,ko00002,ko01000 - - - GHMP_kinases_C,GHMP_kinases_N LIIFOLDO_00117 742767.HMPREF9456_00512 1.34e-51 166.0 COG1396@1|root,COG1396@2|Bacteria,4NVQ0@976|Bacteroidetes,2G3CW@200643|Bacteroidia,22YSW@171551|Porphyromonadaceae 976|Bacteroidetes K Helix-turn-helix domain - - - - - - - - - - - - HTH_19,HTH_3 LIIFOLDO_00119 435591.BDI_0760 0.0 896.0 COG2271@1|root,COG2271@2|Bacteria,4PKTC@976|Bacteroidetes,2G3HT@200643|Bacteroidia,23233@171551|Porphyromonadaceae 976|Bacteroidetes G Major Facilitator Superfamily - - - - - - - - - - - - MFS_1 LIIFOLDO_00120 435591.BDI_0761 0.0 877.0 COG0285@1|root,COG0285@2|Bacteria,4NES8@976|Bacteroidetes,2FNFB@200643|Bacteroidia,22VZ3@171551|Porphyromonadaceae 976|Bacteroidetes H Belongs to the folylpolyglutamate synthase family folC - 6.3.2.12,6.3.2.17 ko:K11754 ko00790,ko01100,map00790,map01100 M00126,M00841 R00942,R02237,R04241 RC00064,RC00090,RC00162 ko00000,ko00001,ko00002,ko01000 - - - Mur_ligase_M LIIFOLDO_00121 435591.BDI_0762 6.46e-58 179.0 2E3FD@1|root,32YE7@2|Bacteria,4NV0S@976|Bacteroidetes,2FUN0@200643|Bacteroidia,22YSC@171551|Porphyromonadaceae 976|Bacteroidetes S TSCPD domain - - - - - - - - - - - - TSCPD LIIFOLDO_00122 435591.BDI_0763 1.89e-157 442.0 COG0745@1|root,COG0745@2|Bacteria,4NGNK@976|Bacteroidetes,2FNUC@200643|Bacteroidia,22ZQ4@171551|Porphyromonadaceae 976|Bacteroidetes T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - - - - - - - - - - Response_reg,Trans_reg_C LIIFOLDO_00123 435591.BDI_0764 0.0 915.0 COG0642@1|root,COG2205@2|Bacteria,4NIC6@976|Bacteroidetes,2FNX0@200643|Bacteroidia,2309I@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - HATPase_c,HisKA LIIFOLDO_00124 435591.BDI_0765 1.11e-95 300.0 COG0642@1|root,COG0784@1|root,COG2202@1|root,COG0784@2|Bacteria,COG2202@2|Bacteria,COG2205@2|Bacteria,4NDXU@976|Bacteroidetes,2FXAU@200643|Bacteroidia,231GG@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - 7TMR-DISMED2,AAA_16,GAF,HATPase_c,HisKA,PAS_3,PAS_9,Pkinase,Response_reg,SpoIIE,Y_Y_Y LIIFOLDO_00125 435591.BDI_0765 0.0 1145.0 COG0642@1|root,COG0784@1|root,COG2202@1|root,COG0784@2|Bacteria,COG2202@2|Bacteria,COG2205@2|Bacteria,4NDXU@976|Bacteroidetes,2FXAU@200643|Bacteroidia,231GG@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - 7TMR-DISMED2,AAA_16,GAF,HATPase_c,HisKA,PAS_3,PAS_9,Pkinase,Response_reg,SpoIIE,Y_Y_Y LIIFOLDO_00126 435591.BDI_0766 1.41e-210 582.0 COG2169@1|root,COG2169@2|Bacteria,4P21T@976|Bacteroidetes,2FR6F@200643|Bacteroidia 976|Bacteroidetes K transcriptional regulator (AraC family) - - - - - - - - - - - - HTH_18 LIIFOLDO_00127 1347393.HG726022_gene3700 3.48e-06 47.8 COG1335@1|root,COG1335@2|Bacteria,4NM75@976|Bacteroidetes,2FQTB@200643|Bacteroidia,4APA2@815|Bacteroidaceae 976|Bacteroidetes Q Isochorismatase family - - - - - - - - - - - - Isochorismatase LIIFOLDO_00128 435591.BDI_0768 0.0 1548.0 COG1629@1|root,COG4771@2|Bacteria,4PKE2@976|Bacteroidetes,2G3DZ@200643|Bacteroidia,22WQS@171551|Porphyromonadaceae 976|Bacteroidetes P Outer membrane protein beta-barrel family - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3 LIIFOLDO_00129 435591.BDI_0769 4.44e-126 360.0 COG2095@1|root,COG2095@2|Bacteria,4NG94@976|Bacteroidetes,2FNCS@200643|Bacteroidia,22XUU@171551|Porphyromonadaceae 976|Bacteroidetes U UPF0056 membrane protein marC - - ko:K05595 - - - - ko00000,ko02000 2.A.95.1 - - MarC LIIFOLDO_00130 435591.BDI_0770 9.43e-317 863.0 COG1875@1|root,COG1875@2|Bacteria,4NDUI@976|Bacteroidetes,2FP3H@200643|Bacteroidia,22W36@171551|Porphyromonadaceae 976|Bacteroidetes T Phosphate starvation protein PhoH ybeZ_1 - - ko:K07175 - - - - ko00000 - - - PIN_4,PhoH LIIFOLDO_00131 435591.BDI_0771 1.33e-91 267.0 COG1359@1|root,COG1359@2|Bacteria 2|Bacteria S Antibiotic biosynthesis monooxygenase - - 1.5.1.40 ko:K06988 - - - - ko00000,ko01000 - - - ABM,MFS_3 LIIFOLDO_00132 1122931.AUAE01000001_gene720 5.27e-13 77.4 2DVIX@1|root,33W44@2|Bacteria,4P3PR@976|Bacteroidetes,2FRJ1@200643|Bacteroidia,230PS@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4925) - - - - - - - - - - - - DUF4925 LIIFOLDO_00133 435591.BDI_0773 9.47e-241 664.0 COG0795@1|root,COG0795@2|Bacteria,4NF8Y@976|Bacteroidetes,2FM2K@200643|Bacteroidia,22WPG@171551|Porphyromonadaceae 976|Bacteroidetes S Permease, YjgP YjgQ family lptG - - ko:K11720 ko02010,map02010 M00320 - - ko00000,ko00001,ko00002,ko02000 1.B.42.1 - - YjgP_YjgQ LIIFOLDO_00134 435591.BDI_0774 1.64e-285 778.0 COG0343@1|root,COG0343@2|Bacteria,4NE15@976|Bacteroidetes,2FMUM@200643|Bacteroidia,22VYI@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) tgt - 2.4.2.29 ko:K00773 - - R03789,R10209 RC00063 ko00000,ko01000,ko03016 - - - TGT LIIFOLDO_00135 435591.BDI_0775 0.0 962.0 COG0348@1|root,COG1143@1|root,COG0348@2|Bacteria,COG1143@2|Bacteria,4NHSX@976|Bacteroidetes,2FN5F@200643|Bacteroidia,22W4S@171551|Porphyromonadaceae 976|Bacteroidetes C 4Fe-4S binding domain - - - - - - - - - - - - Fer4,Fer4_5,Fer4_7,Fer4_9 LIIFOLDO_00136 435591.BDI_0776 8.64e-225 619.0 COG2006@1|root,COG2006@2|Bacteria,4NH1F@976|Bacteroidetes,2FP1X@200643|Bacteroidia,22X7D@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF362) - - - - - - - - - - - - DUF362,TAT_signal LIIFOLDO_00138 435591.BDI_0778 2.47e-220 606.0 COG2017@1|root,COG2017@2|Bacteria,4NMWB@976|Bacteroidetes,2FNID@200643|Bacteroidia,22ZWD@171551|Porphyromonadaceae 976|Bacteroidetes G Aldose 1-epimerase lacX - - - - - - - - - - - Aldose_epim LIIFOLDO_00139 435591.BDI_0779 1.32e-153 432.0 COG0569@1|root,COG0569@2|Bacteria,4NGRQ@976|Bacteroidetes,2FMQT@200643|Bacteroidia,22YIR@171551|Porphyromonadaceae 976|Bacteroidetes P COG0569 K transport systems NAD-binding component ktrA - - ko:K03499 - - - - ko00000,ko02000 2.A.38.1,2.A.38.4 - - TrkA_C,TrkA_N LIIFOLDO_00140 435591.BDI_0780 0.0 1137.0 COG0168@1|root,COG0168@2|Bacteria,4NF7R@976|Bacteroidetes,2FPRA@200643|Bacteroidia,22WUJ@171551|Porphyromonadaceae 976|Bacteroidetes P COG0168 Trk-type K transport systems, membrane components ktrB - - ko:K03498 - - - - ko00000,ko02000 2.A.38.1,2.A.38.4 - - TrkH LIIFOLDO_00141 435591.BDI_0781 7.76e-180 500.0 COG1051@1|root,COG4111@1|root,COG1051@2|Bacteria,COG4111@2|Bacteria,4NIBP@976|Bacteroidetes,2FNT4@200643|Bacteroidia,22XT1@171551|Porphyromonadaceae 976|Bacteroidetes F NUDIX domain - - - - - - - - - - - - NUDIX LIIFOLDO_00142 435591.BDI_0782 0.0 987.0 COG1070@1|root,COG1070@2|Bacteria,4NFBZ@976|Bacteroidetes,2FPIS@200643|Bacteroidia,22WNJ@171551|Porphyromonadaceae 976|Bacteroidetes G FGGY family of carbohydrate kinases, N-terminal domain xylB_2 - 2.7.1.17 ko:K00854 ko00040,ko01100,map00040,map01100 M00014 R01639 RC00002,RC00538 ko00000,ko00001,ko00002,ko01000 - - - FGGY_C,FGGY_N LIIFOLDO_00143 435591.BDI_0783 0.0 912.0 COG2115@1|root,COG2115@2|Bacteria,4NEBQ@976|Bacteroidetes,2FN9P@200643|Bacteroidia,22WI3@171551|Porphyromonadaceae 976|Bacteroidetes G Xylose isomerase xylA GO:0003674,GO:0003824,GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0009045,GO:0009056,GO:0016052,GO:0016853,GO:0016860,GO:0016861,GO:0019321,GO:0019323,GO:0042732,GO:0042843,GO:0044238,GO:0044281,GO:0044282,GO:0046365,GO:0071704,GO:1901575 5.3.1.5 ko:K01805 ko00040,ko00051,ko01100,map00040,map00051,map01100 - R00878,R01432 RC00376,RC00516 ko00000,ko00001,ko01000 - - - - LIIFOLDO_00144 435591.BDI_0784 0.0 989.0 COG0477@1|root,COG0477@2|Bacteria,4PKTJ@976|Bacteroidetes,2FNZ0@200643|Bacteroidia,22W9K@171551|Porphyromonadaceae 976|Bacteroidetes EGP Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family - - - ko:K08138 - - - - ko00000,ko02000 2.A.1.1.3 - - Sugar_tr LIIFOLDO_00145 435591.BDI_0785 0.0 1570.0 COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,2FN9Q@200643|Bacteroidia 976|Bacteroidetes V Efflux ABC transporter, permease protein - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD LIIFOLDO_00146 435591.BDI_0786 0.0 1644.0 COG1882@1|root,COG1882@2|Bacteria,4NDWW@976|Bacteroidetes,2FMC2@200643|Bacteroidia,22WNW@171551|Porphyromonadaceae 976|Bacteroidetes C Pyruvate formate lyase-like - - 2.3.1.54,4.1.1.83 ko:K00656,ko:K18427 ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120 - R00212,R06987 RC00004,RC01181,RC02742,RC02833 ko00000,ko00001,ko01000 - - - Gly_radical,PFL-like LIIFOLDO_00147 435591.BDI_0787 1.59e-211 585.0 COG1180@1|root,COG1180@2|Bacteria,4NIUZ@976|Bacteroidetes,2FP2R@200643|Bacteroidia,22XIT@171551|Porphyromonadaceae 976|Bacteroidetes C 4Fe-4S single cluster domain - - 1.97.1.4 ko:K04069 - - R04710 - ko00000,ko01000 - - - Fer4,Fer4_12,Radical_SAM LIIFOLDO_00148 435591.BDI_0788 7.89e-212 585.0 COG2207@1|root,COG2207@2|Bacteria,4NG4P@976|Bacteroidetes,2FN04@200643|Bacteroidia,22Y0X@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix, arabinose operon control protein - - - - - - - - - - - - AraC_binding,HTH_18 LIIFOLDO_00149 435591.BDI_0789 1.84e-238 656.0 COG0845@1|root,COG0845@2|Bacteria,4NERP@976|Bacteroidetes,2FPPN@200643|Bacteroidia,22WZ1@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - - - - - - - - - - HlyD_D23 LIIFOLDO_00150 435591.BDI_0790 0.0 1931.0 COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,2FMG1@200643|Bacteroidia,22W2A@171551|Porphyromonadaceae 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - - - - - - - - - - ACR_tran LIIFOLDO_00151 435591.BDI_0791 8.24e-307 837.0 COG1538@1|root,COG1538@2|Bacteria,4NITS@976|Bacteroidetes,2FP1H@200643|Bacteroidia,22X49@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - - - - - - - - - - OEP LIIFOLDO_00152 435591.BDI_0792 3.05e-193 536.0 COG1218@1|root,COG1218@2|Bacteria,4NFHY@976|Bacteroidetes,2FP00@200643|Bacteroidia,22X12@171551|Porphyromonadaceae 976|Bacteroidetes P Inositol monophosphatase family cysQ - 3.1.3.7 ko:K01082 ko00920,ko01100,ko01120,ko01130,map00920,map01100,map01120,map01130 - R00188,R00508 RC00078 ko00000,ko00001,ko01000,ko03016 - - - Inositol_P LIIFOLDO_00153 435591.BDI_0793 0.0 1003.0 COG0471@1|root,COG0471@2|Bacteria,4NF52@976|Bacteroidetes,2FNWH@200643|Bacteroidia,22X6C@171551|Porphyromonadaceae 976|Bacteroidetes P Citrate transporter - - - - - - - - - - - - CitMHS,TrkA_C LIIFOLDO_00154 435591.BDI_0794 9.87e-139 392.0 COG0529@1|root,COG0529@2|Bacteria,4NGCU@976|Bacteroidetes,2FMA4@200643|Bacteroidia,22XG5@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the synthesis of activated sulfate cysC GO:0003674,GO:0003824,GO:0004020,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237 2.7.1.25 ko:K00860 ko00230,ko00920,ko01100,ko01120,map00230,map00920,map01100,map01120 M00176 R00509,R04928 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 - - - APS_kinase LIIFOLDO_00155 435591.BDI_0795 2.47e-220 607.0 COG0175@1|root,COG0175@2|Bacteria,4NEPD@976|Bacteroidetes,2FM2X@200643|Bacteroidia,22WIA@171551|Porphyromonadaceae 976|Bacteroidetes H COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase) FAD synthetase cysD - 2.7.7.4 ko:K00957 ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130 M00176,M00596 R00529,R04929 RC02809,RC02889 ko00000,ko00001,ko00002,ko01000 - - - PAPS_reduct LIIFOLDO_00156 435591.BDI_0796 0.0 950.0 COG2895@1|root,COG2895@2|Bacteria,4NETI@976|Bacteroidetes,2FP06@200643|Bacteroidia,22X3Y@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily cysN GO:0006790,GO:0008150,GO:0008152,GO:0009987,GO:0044237 2.7.1.25,2.7.7.4 ko:K00955,ko:K00956 ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130 M00176,M00596 R00509,R00529,R04928,R04929 RC00002,RC00078,RC02809,RC02889 ko00000,ko00001,ko00002,ko01000 - - - APS_kinase,GTP_EFTU LIIFOLDO_00157 435591.BDI_0797 3.39e-278 759.0 COG0438@1|root,COG0438@2|Bacteria,4PMXT@976|Bacteroidetes,2G0JY@200643|Bacteroidia,231CH@171551|Porphyromonadaceae 976|Bacteroidetes M Sulfotransferase domain - - - - - - - - - - - - Sulfotransfer_3 LIIFOLDO_00158 435591.BDI_0798 4.54e-240 659.0 28HM4@1|root,2Z7VS@2|Bacteria,4NGBW@976|Bacteroidetes,2FPDI@200643|Bacteroidia,22WES@171551|Porphyromonadaceae 976|Bacteroidetes S Putative carbohydrate metabolism domain - - - - - - - - - - - - PCMD LIIFOLDO_00159 435591.BDI_0799 0.0 1299.0 COG0272@1|root,COG0272@2|Bacteria,4NE2X@976|Bacteroidetes,2FKZZ@200643|Bacteroidia,22WHC@171551|Porphyromonadaceae 976|Bacteroidetes L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA ligA GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 - R00382 RC00005 ko00000,ko00001,ko01000,ko03032,ko03400 - - - BRCT,DNA_ligase_OB,DNA_ligase_ZBD,DNA_ligase_aden,HHH_2,HHH_5 LIIFOLDO_00160 435591.BDI_0800 1.46e-123 352.0 2ENX1@1|root,33GHZ@2|Bacteria,4NXFU@976|Bacteroidetes 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00161 435591.BDI_0801 7.85e-210 580.0 COG0329@1|root,COG0329@2|Bacteria,4NFP9@976|Bacteroidetes,2FMFC@200643|Bacteroidia,22WYN@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) dapA - 4.3.3.7 ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R10147 RC03062,RC03063 ko00000,ko00001,ko00002,ko01000 - - - DHDPS LIIFOLDO_00162 435591.BDI_0802 0.0 2710.0 COG1538@1|root,COG3696@1|root,COG1538@2|Bacteria,COG3696@2|Bacteria,4P36A@976|Bacteroidetes,2FMH3@200643|Bacteroidia,22VYK@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family czcA - - ko:K15726 - - - - ko00000,ko02000 2.A.6.1.2 - - ACR_tran,OEP LIIFOLDO_00163 435591.BDI_0803 4.33e-208 577.0 COG0845@1|root,COG0845@2|Bacteria,4NDW5@976|Bacteroidetes,2FN0F@200643|Bacteroidia,22Y3F@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K15727 - - - - ko00000,ko02000 8.A.1.2.1 - - HlyD_D23 LIIFOLDO_00164 435591.BDI_0804 1.04e-243 670.0 COG2972@1|root,COG2972@2|Bacteria,4NFDP@976|Bacteroidetes,2FPUC@200643|Bacteroidia,22Y42@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase - - - - - - - - - - - - His_kinase LIIFOLDO_00165 435591.BDI_0805 6.85e-178 496.0 COG3279@1|root,COG3279@2|Bacteria,4NGBF@976|Bacteroidetes,2FMKB@200643|Bacteroidia,22XZT@171551|Porphyromonadaceae 976|Bacteroidetes T LytTr DNA-binding domain - - - ko:K02477 - - - - ko00000,ko02022 - - - LytTR,Response_reg LIIFOLDO_00166 435591.BDI_0806 0.0 1295.0 COG0457@1|root,COG0642@1|root,COG0457@2|Bacteria,COG2205@2|Bacteria,4NZXR@976|Bacteroidetes,2FN6M@200643|Bacteroidia,231GH@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - HATPase_c,HisKA LIIFOLDO_00167 435591.BDI_0807 0.0 1148.0 COG5002@1|root,COG5002@2|Bacteria,4NETP@976|Bacteroidetes,2FKYG@200643|Bacteroidia,22W46@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase - - 2.7.13.3 ko:K02484,ko:K07636 ko02020,map02020 M00434 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - HATPase_c,HisKA LIIFOLDO_00168 435591.BDI_0808 6.84e-156 438.0 COG0745@1|root,COG0745@2|Bacteria,4NG7D@976|Bacteroidetes,2FMJH@200643|Bacteroidia,22X7P@171551|Porphyromonadaceae 976|Bacteroidetes T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain srrA - - ko:K07657,ko:K07658 ko02020,map02020 M00434 - - ko00000,ko00001,ko00002,ko02022 - - - Response_reg,Trans_reg_C LIIFOLDO_00169 435591.BDI_0809 1.11e-239 658.0 COG0860@1|root,COG0860@2|Bacteria,4NHZA@976|Bacteroidetes,2FP3Y@200643|Bacteroidia,22X0I@171551|Porphyromonadaceae 976|Bacteroidetes M N-acetylmuramoyl-L-alanine amidase - - 3.5.1.28 ko:K01448 ko01503,map01503 M00727 R04112 RC00064,RC00141 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 - - - Amidase_3 LIIFOLDO_00170 435591.BDI_0810 1.22e-138 391.0 COG0847@1|root,COG0847@2|Bacteria,4NPNG@976|Bacteroidetes,2FS7S@200643|Bacteroidia 976|Bacteroidetes L Exonuclease - - 2.7.7.7 ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - RNase_T LIIFOLDO_00171 435591.BDI_0811 2.97e-95 278.0 COG1278@1|root,COG1278@2|Bacteria,4NNNH@976|Bacteroidetes,2FSAQ@200643|Bacteroidia,22YBN@171551|Porphyromonadaceae 976|Bacteroidetes K 'Cold-shock' DNA-binding domain cspG - - - - - - - - - - - CSD LIIFOLDO_00172 435591.BDI_0812 3.14e-188 523.0 COG0413@1|root,COG0413@2|Bacteria,4NDX4@976|Bacteroidetes,2FNNC@200643|Bacteroidia,22WEU@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate panB - 2.1.2.11 ko:K00606 ko00770,ko01100,ko01110,map00770,map01100,map01110 M00119 R01226 RC00022,RC00200 ko00000,ko00001,ko00002,ko01000 - - - Pantoate_transf LIIFOLDO_00173 435591.BDI_0813 0.0 904.0 COG0671@1|root,COG0671@2|Bacteria,4NKUR@976|Bacteroidetes,2FQBW@200643|Bacteroidia,22XJ4@171551|Porphyromonadaceae 976|Bacteroidetes I Acid phosphatase homologues - GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0042578,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - - - - - - - - - - OMP_b-brl,PAP2 LIIFOLDO_00174 435591.BDI_1915 2.54e-286 782.0 COG0156@1|root,COG0156@2|Bacteria,4NEXI@976|Bacteroidetes,2FM2U@200643|Bacteroidia,22X1Z@171551|Porphyromonadaceae 976|Bacteroidetes E 8-amino-7-oxononanoate synthase bioF - 2.3.1.29,2.3.1.47 ko:K00639,ko:K00652 ko00260,ko00780,ko01100,map00260,map00780,map01100 M00123,M00573,M00577 R00371,R03210,R10124 RC00004,RC00039,RC00394,RC02725 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_1_2 LIIFOLDO_00175 435591.BDI_1914 3.32e-315 857.0 COG0161@1|root,COG0161@2|Bacteria,4NEJN@976|Bacteroidetes,2FNNH@200643|Bacteroidia,22W4J@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor bioA - 2.6.1.62 ko:K00833 ko00780,ko01100,map00780,map01100 M00123,M00573,M00577 R03231 RC00006,RC00887 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_3 LIIFOLDO_00176 435591.BDI_1913 4e-234 644.0 COG0502@1|root,COG0502@2|Bacteria,4NEMA@976|Bacteroidetes,2FN6Q@200643|Bacteroidia,22WH5@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism bioB - 2.8.1.6 ko:K01012 ko00780,ko01100,map00780,map01100 M00123,M00573,M00577 R01078 RC00441 ko00000,ko00001,ko00002,ko01000 - - - BATS,Radical_SAM LIIFOLDO_00177 435591.BDI_1912 1.48e-92 271.0 28YFF@1|root,32NQS@2|Bacteria,4P9U6@976|Bacteroidetes,2FVGN@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00178 435591.BDI_1911 0.0 1058.0 COG3104@1|root,COG3104@2|Bacteria,4NE8R@976|Bacteroidetes,2FNB6@200643|Bacteroidia,22WY5@171551|Porphyromonadaceae 976|Bacteroidetes E amino acid peptide transporter - - - ko:K03305 - - - - ko00000 2.A.17 - - PTR2 LIIFOLDO_00179 435591.BDI_1910 1.37e-246 678.0 28M15@1|root,2ZAG0@2|Bacteria,4NJBY@976|Bacteroidetes,2FMGZ@200643|Bacteroidia,22WHH@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4831) - - - - - - - - - - - - DUF4831 LIIFOLDO_00180 435591.BDI_1909 3.92e-164 460.0 COG3568@1|root,COG3568@2|Bacteria,4NEIF@976|Bacteroidetes,2FMWV@200643|Bacteroidia,22XIF@171551|Porphyromonadaceae 976|Bacteroidetes S Endonuclease/Exonuclease/phosphatase family - - - - - - - - - - - - Exo_endo_phos,Metallophos,Pur_ac_phosph_N LIIFOLDO_00181 435591.BDI_1908 0.0 1104.0 COG0561@1|root,COG0561@2|Bacteria,4PMY0@976|Bacteroidetes,2FM3S@200643|Bacteroidia,2300K@171551|Porphyromonadaceae 976|Bacteroidetes S SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_00182 435591.BDI_1907 0.0 2185.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FWS8@200643|Bacteroidia,2324W@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec LIIFOLDO_00183 435591.BDI_1906 2.87e-52 164.0 COG1595@1|root,COG1595@2|Bacteria 2|Bacteria K DNA-templated transcription, initiation - - - ko:K03088 - - - - ko00000,ko03021 - - - Glyco_hydro_cc,Sigma70_r2,Sigma70_r4_2 LIIFOLDO_00184 435591.BDI_1905 3.06e-203 563.0 COG3712@1|root,COG3712@2|Bacteria,4NKTC@976|Bacteroidetes,2FMS6@200643|Bacteroidia 976|Bacteroidetes PT Sigma factor regulatory protein, FecR PupR family - - - - - - - - - - - - DUF4974,FecR LIIFOLDO_00185 435591.BDI_1904 8.25e-66 199.0 COG1595@1|root,COG1595@2|Bacteria 2|Bacteria K DNA-templated transcription, initiation - - - ko:K03088 - - - - ko00000,ko03021 - - - Glyco_hydro_cc,Sigma70_r2,Sigma70_r4_2 LIIFOLDO_00186 435591.BDI_1903 1.08e-214 591.0 COG1082@1|root,COG1082@2|Bacteria,4NJJZ@976|Bacteroidetes,2FQWU@200643|Bacteroidia,22WTW@171551|Porphyromonadaceae 976|Bacteroidetes G Xylose isomerase-like TIM barrel - - - - - - - - - - - - AP_endonuc_2 LIIFOLDO_00187 435591.BDI_1902 0.0 1071.0 COG0673@1|root,COG0673@2|Bacteria,4NEN5@976|Bacteroidetes,2FQ0Q@200643|Bacteroidia,22Z6K@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA,GFO_IDH_MocA_C,TAT_signal LIIFOLDO_00188 435591.BDI_1901 0.0 897.0 COG1082@1|root,COG2133@1|root,COG1082@2|Bacteria,COG2133@2|Bacteria,4NFKF@976|Bacteroidetes,2FRR2@200643|Bacteroidia,22XIX@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080 LIIFOLDO_00190 435591.BDI_1900 0.0 938.0 COG0062@1|root,COG0063@1|root,COG0062@2|Bacteria,COG0063@2|Bacteria,4NG2F@976|Bacteroidetes,2FQ4K@200643|Bacteroidia,22W49@171551|Porphyromonadaceae 976|Bacteroidetes H Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration nnrD - 4.2.1.136,5.1.99.6 ko:K17758,ko:K17759 - - - - ko00000,ko01000 - - - Carb_kinase,YjeF_N LIIFOLDO_00191 435591.BDI_1899 1.25e-140 397.0 COG0634@1|root,COG0634@2|Bacteria,4NNIB@976|Bacteroidetes,2FN5J@200643|Bacteroidia,22Y0N@171551|Porphyromonadaceae 976|Bacteroidetes F Hypoxanthine phosphoribosyltransferase hpt - 2.4.2.8 ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 - R00190,R01132,R01229,R02142,R08237,R08238,R08245 RC00063,RC00122 ko00000,ko00001,ko01000 - - - Pribosyltran LIIFOLDO_00192 435591.BDI_1898 1.8e-130 370.0 COG0563@1|root,COG0563@2|Bacteria,4NG7J@976|Bacteroidetes,2FM8T@200643|Bacteroidia,22XNF@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism adk - 2.7.4.3 ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 M00049 R00127,R01547,R11319 RC00002 ko00000,ko00001,ko00002,ko01000,ko04147 - - - ADK,Pribosyltran LIIFOLDO_00193 435591.BDI_1897 2.85e-266 730.0 COG0536@1|root,COG0536@2|Bacteria,4NEK4@976|Bacteroidetes,2FM6Z@200643|Bacteroidia,22W3F@171551|Porphyromonadaceae 976|Bacteroidetes S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control obg - - ko:K03979 - - - - ko00000,ko01000,ko03009 - - - GTP1_OBG,MMR_HSR1 LIIFOLDO_00194 435591.BDI_1896 1.56e-191 532.0 COG1496@1|root,COG1496@2|Bacteria,4NM9H@976|Bacteroidetes,2FN7X@200643|Bacteroidia,22XMH@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the multicopper oxidase YfiH RL5 family - GO:0003674,GO:0003824,GO:0005488,GO:0005507,GO:0005515,GO:0008150,GO:0008152,GO:0016491,GO:0016679,GO:0016682,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0046983,GO:0055114 - ko:K05810 - - - - ko00000,ko01000 - - - Cu-oxidase_4 LIIFOLDO_00195 435591.BDI_1895 3.27e-159 446.0 COG3382@1|root,COG3382@2|Bacteria,4NMUG@976|Bacteroidetes,2FNY7@200643|Bacteroidia,22XQA@171551|Porphyromonadaceae 976|Bacteroidetes S B3/4 domain - - - - - - - - - - - - B3_4 LIIFOLDO_00196 435591.BDI_1894 7.03e-40 132.0 2DQMQ@1|root,337NM@2|Bacteria,4NX13@976|Bacteroidetes,2FUJV@200643|Bacteroidia,22YU8@171551|Porphyromonadaceae 976|Bacteroidetes S Winged helix-turn-helix domain (DUF2582) - - - - - - - - - - - - DUF2582 LIIFOLDO_00197 435591.BDI_1893 1.32e-58 181.0 2EGWR@1|root,33ANW@2|Bacteria,4NYKH@976|Bacteroidetes,2FT4M@200643|Bacteroidia,22YZ7@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - LIIFOLDO_00198 435591.BDI_1892 7.65e-62 189.0 COG3027@1|root,COG3027@2|Bacteria,4NSA5@976|Bacteroidetes,2FUYF@200643|Bacteroidia,231RA@171551|Porphyromonadaceae 976|Bacteroidetes D Cell division protein ZapA zapA - - ko:K09888 - - - - ko00000,ko03036 - - - ZapA LIIFOLDO_00199 435591.BDI_1891 0.0 906.0 COG1418@1|root,COG1418@2|Bacteria,4NE3V@976|Bacteroidetes,2FKZ6@200643|Bacteroidia,22XBS@171551|Porphyromonadaceae 976|Bacteroidetes S Endoribonuclease that initiates mRNA decay rny - - ko:K18682 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03019 - - - DUF3552,HD,KH_1 LIIFOLDO_00200 435591.BDI_1890 0.0 1247.0 COG1368@1|root,COG1368@2|Bacteria,4NFI9@976|Bacteroidetes,2FN88@200643|Bacteroidia,22X9H@171551|Porphyromonadaceae 976|Bacteroidetes M Sulfatase ltaS2 - - - - - - - - - - - Sulfatase LIIFOLDO_00201 435591.BDI_1889 0.0 1067.0 COG0488@1|root,COG0488@2|Bacteria,4NEHU@976|Bacteroidetes,2FMW7@200643|Bacteroidia,22VV9@171551|Porphyromonadaceae 976|Bacteroidetes S ABC transporter, ATP-binding protein - - - - - - - - - - - - ABC_tran,ABC_tran_Xtn LIIFOLDO_00202 435591.BDI_1888 3.42e-196 544.0 COG3617@1|root,COG3617@2|Bacteria,4NIG0@976|Bacteroidetes,2G3ES@200643|Bacteroidia 976|Bacteroidetes K BRO family, N-terminal domain - - - - - - - - - - - - Bro-N LIIFOLDO_00203 435591.BDI_1887 7.29e-61 187.0 COG1669@1|root,COG1669@2|Bacteria,4PA6W@976|Bacteroidetes,2FTND@200643|Bacteroidia 976|Bacteroidetes S Nucleotidyltransferase domain - - - ko:K07075 - - - - ko00000 - - - NTP_transf_2 LIIFOLDO_00204 1236514.BAKL01000024_gene2296 1.56e-52 167.0 COG2361@1|root,COG2361@2|Bacteria,4NV8D@976|Bacteroidetes,2FVJ2@200643|Bacteroidia 976|Bacteroidetes S Protein of unknown function DUF86 - - - - - - - - - - - - DUF86 LIIFOLDO_00205 693979.Bache_2305 9.2e-95 294.0 COG1835@1|root,COG1835@2|Bacteria,4NT8V@976|Bacteroidetes,2FTF3@200643|Bacteroidia,4ARCJ@815|Bacteroidaceae 976|Bacteroidetes I Acyltransferase family - - - - - - - - - - - - Acyl_transf_3 LIIFOLDO_00206 435591.BDI_1885 0.0 995.0 COG0138@1|root,COG0138@2|Bacteria,4NEZD@976|Bacteroidetes,2FN3G@200643|Bacteroidia,22WKZ@171551|Porphyromonadaceae 976|Bacteroidetes F Bifunctional purine biosynthesis protein PurH purH - 2.1.2.3,3.5.4.10 ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 M00048 R01127,R04560 RC00026,RC00263,RC00456 ko00000,ko00001,ko00002,ko01000,ko04147 - - - AICARFT_IMPCHas,MGS LIIFOLDO_00207 435591.BDI_1884 1.35e-238 656.0 COG1077@1|root,COG1077@2|Bacteria,4NETQ@976|Bacteroidetes,2FM2I@200643|Bacteroidia,22W6A@171551|Porphyromonadaceae 976|Bacteroidetes D Rod shape-determining protein MreB mreB - - ko:K03569 - - - - ko00000,ko02048,ko03036,ko04812 1.A.33.1,9.B.157.1 - - MreB_Mbl LIIFOLDO_00208 435591.BDI_1883 1.1e-198 551.0 COG1792@1|root,COG1792@2|Bacteria,4NF14@976|Bacteroidetes,2FMWS@200643|Bacteroidia,22WND@171551|Porphyromonadaceae 976|Bacteroidetes M shape-determining protein MreC mreC - - ko:K03570 - - - - ko00000,ko03036 9.B.157.1 - - MreC LIIFOLDO_00209 435591.BDI_1882 1.83e-112 323.0 2AFDM@1|root,315DF@2|Bacteria,4NQ5K@976|Bacteroidetes,2FPJA@200643|Bacteroidia,22YUU@171551|Porphyromonadaceae 976|Bacteroidetes S rod shape-determining protein MreD mreD - - - - - - - - - - - - LIIFOLDO_00210 435591.BDI_1881 0.0 1273.0 COG0768@1|root,COG0768@2|Bacteria,4NE47@976|Bacteroidetes,2FM4X@200643|Bacteroidia,22WGF@171551|Porphyromonadaceae 976|Bacteroidetes M Penicillin-binding Protein mrdA - 3.4.16.4 ko:K05515 ko00550,ko01501,map00550,map01501 - - - ko00000,ko00001,ko01000,ko01011 - - - PBP_dimer,Transpeptidase LIIFOLDO_00211 435591.BDI_1880 0.0 919.0 COG0772@1|root,COG0772@2|Bacteria,4NDZD@976|Bacteroidetes,2FNA1@200643|Bacteroidia,22W55@171551|Porphyromonadaceae 976|Bacteroidetes D Belongs to the SEDS family rodA - - ko:K05837 - - - - ko00000,ko03036 - - - FTSW_RODA_SPOVE LIIFOLDO_00212 435591.BDI_1878 6.46e-269 746.0 COG1774@1|root,COG1774@2|Bacteria,4NENX@976|Bacteroidetes,2FNYP@200643|Bacteroidia,22WXP@171551|Porphyromonadaceae 976|Bacteroidetes S PSP1 C-terminal domain protein yaaT - - - - - - - - - - - PSP1 LIIFOLDO_00213 435591.BDI_1877 1.31e-287 785.0 COG0156@1|root,COG0156@2|Bacteria,4NFBU@976|Bacteroidetes,2FM0N@200643|Bacteroidia,22W8W@171551|Porphyromonadaceae 976|Bacteroidetes E 2-amino-3-ketobutyrate CoA ligase bioF - 2.3.1.29,2.3.1.47 ko:K00639,ko:K00652 ko00260,ko00780,ko01100,map00260,map00780,map01100 M00123,M00573,M00577 R00371,R03210,R10124 RC00004,RC00039,RC00394,RC02725 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_1_2 LIIFOLDO_00214 435591.BDI_1876 8.4e-234 643.0 COG1597@1|root,COG1597@2|Bacteria,4NJWB@976|Bacteroidetes,2FMGJ@200643|Bacteroidia,22WEB@171551|Porphyromonadaceae 976|Bacteroidetes I Lipid kinase - - - - - - - - - - - - DAGK_cat LIIFOLDO_00215 435591.BDI_1875 1.04e-148 423.0 COG4123@1|root,COG4123@2|Bacteria,4NG1X@976|Bacteroidetes,2FMHH@200643|Bacteroidia,22Y0T@171551|Porphyromonadaceae 976|Bacteroidetes J Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) smtA GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016426,GO:0016430,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.223 ko:K15460 - - - - ko00000,ko01000,ko03016 - - - MTS LIIFOLDO_00216 435591.BDI_1874 0.0 1597.0 COG0466@1|root,COG0466@2|Bacteria,4NE1G@976|Bacteroidetes,2FNKR@200643|Bacteroidia,22X0E@171551|Porphyromonadaceae 976|Bacteroidetes O ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner lon - 3.4.21.53 ko:K01338 ko04112,map04112 - - - ko00000,ko00001,ko01000,ko01002 - - - AAA,LON_substr_bdg,Lon_C LIIFOLDO_00217 435591.BDI_1873 2.35e-188 523.0 COG1082@1|root,COG1082@2|Bacteria,4NJJZ@976|Bacteroidetes,2FV0S@200643|Bacteroidia,22ZJR@171551|Porphyromonadaceae 976|Bacteroidetes G Xylose isomerase-like TIM barrel - - - - - - - - - - - - AP_endonuc_2 LIIFOLDO_00218 435591.BDI_1872 0.0 1050.0 COG0673@1|root,COG0673@2|Bacteria,4NEN5@976|Bacteroidetes,2FQ0Q@200643|Bacteroidia,22Z5Q@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA,GFO_IDH_MocA_C,TAT_signal LIIFOLDO_00219 435591.BDI_1871 2.39e-228 627.0 COG0708@1|root,COG0708@2|Bacteria,4PKV5@976|Bacteroidetes,2G04P@200643|Bacteroidia,22ZHZ@171551|Porphyromonadaceae 976|Bacteroidetes L Endonuclease/Exonuclease/phosphatase family - - - - - - - - - - - - Exo_endo_phos,Laminin_G_3 LIIFOLDO_00220 435591.BDI_1870 8.87e-291 792.0 COG0673@1|root,COG0673@2|Bacteria,4NENY@976|Bacteroidetes,2FWYJ@200643|Bacteroidia,22ZV9@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA LIIFOLDO_00221 435591.BDI_1869 8.77e-192 531.0 COG2133@1|root,COG2133@2|Bacteria,4PMXZ@976|Bacteroidetes,2G0K9@200643|Bacteroidia,2324V@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080 LIIFOLDO_00222 435591.BDI_1868 2.03e-221 609.0 COG1917@1|root,COG4977@1|root,COG1917@2|Bacteria,COG4977@2|Bacteria,4PKXD@976|Bacteroidetes,2G07Q@200643|Bacteroidia,2324U@171551|Porphyromonadaceae 976|Bacteroidetes K AraC-like ligand binding domain - - - - - - - - - - - - AraC_binding,HTH_AraC LIIFOLDO_00223 435591.BDI_1867 2.1e-141 399.0 COG0110@1|root,COG0110@2|Bacteria,4NNWE@976|Bacteroidetes,2G32A@200643|Bacteroidia,231ZM@171551|Porphyromonadaceae 976|Bacteroidetes S Maltose acetyltransferase maa - 2.3.1.79 ko:K00661 - - - - ko00000,ko01000 - - - Hexapep,Hexapep_2,Mac LIIFOLDO_00224 435591.BDI_1866 1.42e-218 603.0 COG1180@1|root,COG1180@2|Bacteria,4NIUZ@976|Bacteroidetes,2FP2R@200643|Bacteroidia,22XIT@171551|Porphyromonadaceae 976|Bacteroidetes C 4Fe-4S single cluster domain pflA - 1.97.1.4 ko:K04069 - - R04710 - ko00000,ko01000 - - - Fer4,Fer4_12,Radical_SAM LIIFOLDO_00225 435591.BDI_1865 0.0 1523.0 COG1882@1|root,COG1882@2|Bacteria,4NDWW@976|Bacteroidetes,2FMC2@200643|Bacteroidia,22WNW@171551|Porphyromonadaceae 976|Bacteroidetes C Pyruvate formate lyase-like - - 2.3.1.54,4.1.1.83 ko:K00656,ko:K18427 ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120 - R00212,R06987 RC00004,RC01181,RC02742,RC02833 ko00000,ko00001,ko01000 - - - Gly_radical,PFL-like LIIFOLDO_00226 435591.BDI_1864 1.15e-181 504.0 COG3010@1|root,COG3010@2|Bacteria,4P2CZ@976|Bacteroidetes,2FUFS@200643|Bacteroidia 976|Bacteroidetes G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P) - - 5.1.3.9 ko:K01788 ko00520,map00520 - R02087 RC00290 ko00000,ko00001,ko01000 - - - NanE LIIFOLDO_00227 435591.BDI_1863 2.41e-232 639.0 COG1940@1|root,COG1940@2|Bacteria,4NFZ1@976|Bacteroidetes,2FNGN@200643|Bacteroidia,22WUD@171551|Porphyromonadaceae 976|Bacteroidetes G glucokinase - - 2.7.1.2 ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 M00001,M00549 R00299,R01600,R01786 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - ROK LIIFOLDO_00228 435591.BDI_1862 5.81e-96 280.0 2DEYG@1|root,2ZPSM@2|Bacteria,4NNJW@976|Bacteroidetes,2FTAK@200643|Bacteroidia,22Y3E@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG14473 non supervised orthologous group - - - - - - - - - - - - - LIIFOLDO_00229 435591.BDI_1861 7.88e-131 372.0 COG0237@1|root,COG0237@2|Bacteria,4NQKS@976|Bacteroidetes,2FSP8@200643|Bacteroidia,22Y5U@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A coaE GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 ko:K00859 ko00770,ko01100,map00770,map01100 M00120 R00130 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 - - - CoaE LIIFOLDO_00230 435591.BDI_1860 9.49e-238 654.0 COG4856@1|root,COG4856@2|Bacteria,4NHJQ@976|Bacteroidetes,2FM3I@200643|Bacteroidia,22Y6Y@171551|Porphyromonadaceae 976|Bacteroidetes S YbbR-like protein - - - - - - - - - - - - YbbR LIIFOLDO_00231 435591.BDI_1859 3.22e-51 163.0 COG1862@1|root,COG1862@2|Bacteria,4NUT4@976|Bacteroidetes,2FTXK@200643|Bacteroidia,22YDB@171551|Porphyromonadaceae 976|Bacteroidetes U Preprotein translocase subunit YajC yajC - - ko:K03210 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2 - - YajC LIIFOLDO_00232 435591.BDI_1858 1.26e-216 598.0 COG0781@1|root,COG0781@2|Bacteria,4NDVR@976|Bacteroidetes,2FMU4@200643|Bacteroidia,22WGB@171551|Porphyromonadaceae 976|Bacteroidetes K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons nusB - - ko:K03625 - - - - ko00000,ko03009,ko03021 - - - NusB LIIFOLDO_00233 435591.BDI_1857 6.6e-83 245.0 2ASD9@1|root,31HSR@2|Bacteria,4NQ71@976|Bacteroidetes,2FS2B@200643|Bacteroidia,22YPC@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3276) - - - - - - - - - - - - DUF3276 LIIFOLDO_00234 411477.PARMER_03888 2.13e-21 84.7 COG2768@1|root,COG2768@2|Bacteria,4NUN8@976|Bacteroidetes,2FUIC@200643|Bacteroidia,22YQ1@171551|Porphyromonadaceae 976|Bacteroidetes C 4Fe-4S binding domain - - - - - - - - - - - - Fer4 LIIFOLDO_00235 435591.BDI_1856 1.07e-162 455.0 2C52N@1|root,2Z7U1@2|Bacteria,4NEZW@976|Bacteroidetes,2FNRZ@200643|Bacteroidia,22XME@171551|Porphyromonadaceae 976|Bacteroidetes S PorT protein porT - - - - - - - - - - - OMP_b-brl_2 LIIFOLDO_00236 435591.BDI_1855 2.33e-201 557.0 COG4589@1|root,COG4589@2|Bacteria,4NIPM@976|Bacteroidetes,2FMKC@200643|Bacteroidia,22XR3@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the CDS family cdsA - 2.7.7.41 ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 M00093 R01799 RC00002 ko00000,ko00001,ko00002,ko01000 - - - CTP_transf_1 LIIFOLDO_00237 435591.BDI_1854 0.0 1321.0 COG0465@1|root,COG0465@2|Bacteria,4NF0E@976|Bacteroidetes,2FNEA@200643|Bacteroidia,22X35@171551|Porphyromonadaceae 976|Bacteroidetes O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins ftsH - - ko:K03798 - M00742 - - ko00000,ko00002,ko01000,ko01002,ko03110 - - - AAA,FtsH_ext,Peptidase_M41 LIIFOLDO_00238 435591.BDI_1853 2.58e-82 243.0 COG0799@1|root,COG0799@2|Bacteria,4NSKK@976|Bacteroidetes,2FSG4@200643|Bacteroidia,22YHP@171551|Porphyromonadaceae 976|Bacteroidetes J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation rsfS - - ko:K09710 - - - - ko00000,ko03009 - - - RsfS LIIFOLDO_00240 435591.BDI_1850 3.66e-309 843.0 COG1668@1|root,COG1668@2|Bacteria,4NFSZ@976|Bacteroidetes,2FMUF@200643|Bacteroidia,22WPZ@171551|Porphyromonadaceae 976|Bacteroidetes CP ABC transporter permease natB - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_3 LIIFOLDO_00241 435591.BDI_1849 7.25e-207 572.0 COG4152@1|root,COG4152@2|Bacteria,4NEJE@976|Bacteroidetes,2FMK3@200643|Bacteroidia,22WQV@171551|Porphyromonadaceae 976|Bacteroidetes S ABC transporter, ATP-binding protein natA - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran,DUF4162 LIIFOLDO_00242 435591.BDI_1848 0.0 1327.0 COG0358@1|root,COG0358@2|Bacteria,4NENT@976|Bacteroidetes,2FMV1@200643|Bacteroidia,22WQI@171551|Porphyromonadaceae 976|Bacteroidetes L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication dnaG - - ko:K02316 ko03030,map03030 - - - ko00000,ko00001,ko01000,ko03032 - - - DnaB_bind,Toprim_2,Toprim_4,Toprim_N,zf-CHC2 LIIFOLDO_00243 435591.BDI_1847 3.4e-120 343.0 COG0250@1|root,COG0250@2|Bacteria,4NUFS@976|Bacteroidetes,2FPHC@200643|Bacteroidia 976|Bacteroidetes K Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - NusG LIIFOLDO_00244 435591.BDI_1404 8.26e-21 86.3 COG1669@1|root,COG1669@2|Bacteria,4NVCI@976|Bacteroidetes,2FT93@200643|Bacteroidia,22YPB@171551|Porphyromonadaceae 976|Bacteroidetes S Nucleotidyltransferase domain - - - ko:K07075 - - - - ko00000 - - - NTP_transf_2 LIIFOLDO_00247 435591.BDI_3615 0.0 1235.0 COG1086@1|root,COG1086@2|Bacteria,4NERY@976|Bacteroidetes,2FMAA@200643|Bacteroidia,22WNH@171551|Porphyromonadaceae 976|Bacteroidetes GM Polysaccharide biosynthesis protein wbpM - - - - - - - - - - - CoA_binding_3,Polysacc_synt_2 LIIFOLDO_00248 435591.BDI_0300 4.3e-172 498.0 COG2244@1|root,COG2244@2|Bacteria,4NNEZ@976|Bacteroidetes,2FQEF@200643|Bacteroidia 976|Bacteroidetes S Polysaccharide biosynthesis protein - - - - - - - - - - - - Polysacc_synt,Polysacc_synt_C LIIFOLDO_00249 435591.BDI_0957 3.74e-142 401.0 COG0705@1|root,COG0705@2|Bacteria,4NECA@976|Bacteroidetes,2FSA6@200643|Bacteroidia,22XQC@171551|Porphyromonadaceae 976|Bacteroidetes S Rhomboid family - - - - - - - - - - - - Rhomboid LIIFOLDO_00250 435591.BDI_0958 0.0 941.0 COG2755@1|root,COG2755@2|Bacteria,4NK39@976|Bacteroidetes,2FMHM@200643|Bacteroidia,22WFB@171551|Porphyromonadaceae 976|Bacteroidetes E COG COG2755 Lysophospholipase L1 and related esterases - - - - - - - - - - - - Lipase_GDSL,Lipase_GDSL_2 LIIFOLDO_00251 435591.BDI_0959 0.0 878.0 COG2755@1|root,COG2755@2|Bacteria,4NGW6@976|Bacteroidetes,2FN21@200643|Bacteroidia,22XZQ@171551|Porphyromonadaceae 976|Bacteroidetes E GDSL-like Lipase/Acylhydrolase - - - - - - - - - - - - Lipase_GDSL,Lipase_GDSL_2,LysM LIIFOLDO_00252 435591.BDI_0960 0.0 1006.0 COG1696@1|root,COG1696@2|Bacteria,4NFK5@976|Bacteroidetes,2FM3F@200643|Bacteroidia,22X7T@171551|Porphyromonadaceae 976|Bacteroidetes M alginate O-acetyltransferase algI - - - - - - - - - - - MBOAT LIIFOLDO_00253 435591.BDI_0961 1.59e-304 831.0 COG0668@1|root,COG0668@2|Bacteria,4NE4R@976|Bacteroidetes,2FN78@200643|Bacteroidia,22X9A@171551|Porphyromonadaceae 976|Bacteroidetes M Mechanosensitive ion channel ybdG_2 - - ko:K16053 - - - - ko00000,ko02000 1.A.23.4.5 - - MS_channel LIIFOLDO_00254 435591.BDI_0962 1.05e-274 752.0 COG0668@1|root,COG0668@2|Bacteria,4NE4R@976|Bacteroidetes,2FMKI@200643|Bacteroidia,231UB@171551|Porphyromonadaceae 976|Bacteroidetes M Mechanosensitive ion channel ybdG_1 - - ko:K16053 - - - - ko00000,ko02000 1.A.23.4.5 - - MS_channel LIIFOLDO_00255 435591.BDI_0963 0.0 1859.0 COG0612@1|root,COG0612@2|Bacteria,4NDXM@976|Bacteroidetes,2FNQC@200643|Bacteroidia,22WU8@171551|Porphyromonadaceae 976|Bacteroidetes S Insulinase (Peptidase family M16) - - - - - - - - - - - - Peptidase_M16,Peptidase_M16_C LIIFOLDO_00256 435591.BDI_0964 1.2e-109 315.0 2ATIR@1|root,31J2R@2|Bacteria,4NR1Z@976|Bacteroidetes,2FUCT@200643|Bacteroidia,22YN9@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4268) - - - - - - - - - - - - DUF4268 LIIFOLDO_00257 435591.BDI_0965 0.0 1669.0 COG0308@1|root,COG0308@2|Bacteria,4NGTZ@976|Bacteroidetes,2FQE9@200643|Bacteroidia,22X2F@171551|Porphyromonadaceae 976|Bacteroidetes E Peptidase family M1 domain pepN - 3.4.11.2 ko:K01256 ko00480,ko01100,map00480,map01100 - R00899,R04951 RC00096,RC00141 ko00000,ko00001,ko01000,ko01002 - - - ERAP1_C,Peptidase_M1 LIIFOLDO_00258 435591.BDI_0966 2.69e-194 540.0 COG0040@1|root,COG0040@2|Bacteria,4NDW8@976|Bacteroidetes,2FNGI@200643|Bacteroidia,22VX5@171551|Porphyromonadaceae 976|Bacteroidetes F ATP phosphoribosyltransferase hisG GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 ko:K00765 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R01071 RC02819,RC03200 ko00000,ko00001,ko00002,ko01000 - - - HisG,HisG_C LIIFOLDO_00259 435591.BDI_0967 6.12e-295 806.0 COG0141@1|root,COG0141@2|Bacteria,4NFPZ@976|Bacteroidetes,2FMY9@200643|Bacteroidia,22WQW@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine hisD GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 ko:K00013 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R01158,R01163,R03012 RC00099,RC00242,RC00463 ko00000,ko00001,ko00002,ko01000 - - - Histidinol_dh LIIFOLDO_00260 435591.BDI_0968 5e-253 693.0 COG0079@1|root,COG0079@2|Bacteria,4NEDI@976|Bacteroidetes,2FMFQ@200643|Bacteroidia,22WB3@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily hisC - 2.6.1.9 ko:K00817 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 M00026 R00694,R00734,R03243 RC00006,RC00888 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_1_2 LIIFOLDO_00261 435591.BDI_0969 6.41e-284 774.0 COG0131@1|root,COG0241@1|root,COG0131@2|Bacteria,COG0241@2|Bacteria,4NENP@976|Bacteroidetes,2FP1T@200643|Bacteroidia,22VYJ@171551|Porphyromonadaceae 976|Bacteroidetes E Histidine biosynthesis bifunctional protein HisB hisB GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.1.3.15,4.2.1.19 ko:K01089,ko:K01693 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R03013,R03457 RC00017,RC00932 ko00000,ko00001,ko00002,ko01000 - - - Hydrolase_like,IGPD,PNK3P LIIFOLDO_00262 435591.BDI_0970 6.5e-218 602.0 COG0031@1|root,COG0031@2|Bacteria,4NDZ9@976|Bacteroidetes,2FME4@200643|Bacteroidia,22WCJ@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the cysteine synthase cystathionine beta- synthase family cysK - 2.5.1.47 ko:K01738,ko:K12339 ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 M00021 R00897,R03132,R03601,R04859 RC00020,RC02814,RC02821,RC02876 ko00000,ko00001,ko00002,ko01000 - - - PALP LIIFOLDO_00263 435591.BDI_0971 3.03e-284 781.0 COG1538@1|root,COG1538@2|Bacteria,4NDZK@976|Bacteroidetes,2FND5@200643|Bacteroidia,22W3J@171551|Porphyromonadaceae 976|Bacteroidetes MU Efflux transporter, outer membrane factor - - - - - - - - - - - - OEP LIIFOLDO_00264 435591.BDI_0972 0.0 1979.0 COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,2FM3B@200643|Bacteroidia,22X30@171551|Porphyromonadaceae 976|Bacteroidetes V AcrB/AcrD/AcrF family - - - ko:K03296 - - - - ko00000 2.A.6.2 - - ACR_tran LIIFOLDO_00265 435591.BDI_0973 1.45e-244 674.0 COG0845@1|root,COG0845@2|Bacteria,4NEXN@976|Bacteroidetes,2FN62@200643|Bacteroidia,22WVC@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K03585 ko01501,ko01503,map01501,map01503 M00646,M00647,M00699,M00718 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 2.A.6.2,8.A.1.6 - - Biotin_lipoyl_2,HlyD_D23 LIIFOLDO_00266 435591.BDI_0974 1.44e-201 558.0 COG2207@1|root,COG2207@2|Bacteria,4NMRA@976|Bacteroidetes,2FN76@200643|Bacteroidia,231H3@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix, arabinose operon control protein thiD - 2.7.1.49,2.7.4.7 ko:K00941 ko00730,ko01100,map00730,map01100 M00127 R03471,R04509 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - HTH_18,Phos_pyr_kin LIIFOLDO_00267 435591.BDI_0975 4.41e-242 670.0 COG1301@1|root,COG1301@2|Bacteria,4NE5X@976|Bacteroidetes,2FP3G@200643|Bacteroidia,22WDI@171551|Porphyromonadaceae 976|Bacteroidetes U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - - - - - - - - - - SDF LIIFOLDO_00268 435591.BDI_0976 5.47e-166 463.0 COG2755@1|root,COG2755@2|Bacteria,4NHBT@976|Bacteroidetes,2G2NP@200643|Bacteroidia,22XYM@171551|Porphyromonadaceae 976|Bacteroidetes E GDSL-like Lipase/Acylhydrolase - - - - - - - - - - - - Lipase_GDSL_2 LIIFOLDO_00269 435591.BDI_0977 0.0 1707.0 COG3250@1|root,COG3250@2|Bacteria,4NH5T@976|Bacteroidetes,2FMQ4@200643|Bacteroidia,22WQD@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of unknown function (DUF5127) - - - - - - - - - - - - DUF1793,DUF4964,DUF4965,DUF5127 LIIFOLDO_00270 435591.BDI_0978 1.49e-222 612.0 COG2207@1|root,COG2207@2|Bacteria,4NJ3X@976|Bacteroidetes,2FMU3@200643|Bacteroidia,22ZYI@171551|Porphyromonadaceae 976|Bacteroidetes K Helix-turn-helix domain - - - - - - - - - - - - HTH_18 LIIFOLDO_00271 435591.BDI_0979 1.32e-221 610.0 COG2207@1|root,COG2207@2|Bacteria,4NDYY@976|Bacteroidetes,2FNFA@200643|Bacteroidia,22WH9@171551|Porphyromonadaceae 976|Bacteroidetes K Transcriptional regulator - - - - - - - - - - - - HTH_18 LIIFOLDO_00272 435591.BDI_0980 8.14e-265 724.0 COG1073@1|root,COG1073@2|Bacteria,4NFJZ@976|Bacteroidetes,2FMNP@200643|Bacteroidia,22W0J@171551|Porphyromonadaceae 976|Bacteroidetes S COG COG1073 Hydrolases of the alpha beta superfamily - - - ko:K06889 - - - - ko00000 - - - AXE1,DLH,Peptidase_S15 LIIFOLDO_00273 435591.BDI_0981 6.56e-147 420.0 COG5434@1|root,COG5434@2|Bacteria,4NGH3@976|Bacteroidetes,2FMQQ@200643|Bacteroidia 976|Bacteroidetes M Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - DUF3737 LIIFOLDO_00274 435591.BDI_0982 1.88e-297 809.0 COG1168@1|root,COG1168@2|Bacteria,4NETH@976|Bacteroidetes,2FMIZ@200643|Bacteroidia 976|Bacteroidetes E Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities patB - 4.4.1.8 ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 - R00782,R01286,R02408,R04941 RC00056,RC00069,RC00382,RC00488,RC00710,RC01245,RC02303 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 LIIFOLDO_00275 435591.BDI_0983 0.0 2165.0 COG3250@1|root,COG3250@2|Bacteria,4NF3W@976|Bacteroidetes,2FM0P@200643|Bacteroidia,22VUW@171551|Porphyromonadaceae 976|Bacteroidetes G beta-galactosidase lacZ - 3.2.1.23 ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 - R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 - - - Bgal_small_N,DUF4981,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N LIIFOLDO_00276 435591.BDI_0984 7.06e-271 742.0 COG0477@1|root,COG2814@2|Bacteria,4NI1T@976|Bacteroidetes,2FRJG@200643|Bacteroidia,22WZ5@171551|Porphyromonadaceae 976|Bacteroidetes EGP Major Facilitator Superfamily - - - - - - - - - - - - MFS_1 LIIFOLDO_00277 435591.BDI_0985 7.58e-98 283.0 2D5AS@1|root,32TIN@2|Bacteria,4NTBS@976|Bacteroidetes,2FSKK@200643|Bacteroidia,22YID@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00278 435591.BDI_0986 6.07e-142 399.0 COG1858@1|root,COG1858@2|Bacteria,4NE50@976|Bacteroidetes,2FR90@200643|Bacteroidia 976|Bacteroidetes C cytochrome C peroxidase - - 1.11.1.5 ko:K00428 - - - - ko00000,ko01000 - - - CCP_MauG,Cytochrom_C LIIFOLDO_00279 435591.BDI_0987 1.22e-312 859.0 COG0028@1|root,COG0028@2|Bacteria,4NH3H@976|Bacteroidetes,2FMG7@200643|Bacteroidia,22VUG@171551|Porphyromonadaceae 976|Bacteroidetes EH Thiamine pyrophosphate enzyme, central domain poxB - 1.2.5.1,2.2.1.6 ko:K00156,ko:K01652 ko00290,ko00620,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R00006,R00014,R00226,R03050,R03145,R04672,R04673,R08648 RC00027,RC00106,RC00860,RC01192,RC02744,RC02893 ko00000,ko00001,ko00002,ko01000 - - - TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N LIIFOLDO_00280 435591.BDI_0988 1.13e-276 755.0 COG0673@1|root,COG0673@2|Bacteria,4NFGY@976|Bacteroidetes,2FPN8@200643|Bacteroidia,22VWM@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA,GFO_IDH_MocA_C LIIFOLDO_00281 435591.BDI_0989 0.0 995.0 COG0442@1|root,COG0442@2|Bacteria,4NEAF@976|Bacteroidetes,2FMZT@200643|Bacteroidia,22X3K@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) proS GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 ko:K01881 ko00970,map00970 M00359,M00360 R03661 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - HGTP_anticodon,ProRS-C_1,tRNA-synt_2b LIIFOLDO_00282 435591.BDI_0990 2.66e-270 739.0 COG2207@1|root,COG2207@2|Bacteria,4PI97@976|Bacteroidetes,2FV6J@200643|Bacteroidia 976|Bacteroidetes K Helix-turn-helix domain - - - - - - - - - - - - HTH_18 LIIFOLDO_00283 435591.BDI_0991 0.0 1116.0 COG0457@1|root,COG0642@1|root,COG0457@2|Bacteria,COG2205@2|Bacteria,4NDXU@976|Bacteroidetes,2FMVV@200643|Bacteroidia,22ZHC@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,TPR_12,TPR_7,TPR_8,Y_Y_Y LIIFOLDO_00284 435591.BDI_0995 8.7e-83 245.0 2A952@1|root,30Y9G@2|Bacteria,4PC0X@976|Bacteroidetes,2FZU1@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00285 435591.BDI_0996 2.93e-298 816.0 COG2885@1|root,COG2885@2|Bacteria,4NI3U@976|Bacteroidetes,2FQF1@200643|Bacteroidia,230CU@171551|Porphyromonadaceae 976|Bacteroidetes M OmpA family - - - ko:K03286 - - - - ko00000,ko02000 1.B.6 - - OMP_b-brl_2,OmpA LIIFOLDO_00289 435591.BDI_1003 1.05e-108 313.0 COG0776@1|root,COG0776@2|Bacteria,4NYJP@976|Bacteroidetes,2FNKN@200643|Bacteroidia 976|Bacteroidetes L regulation of translation - - - - - - - - - - - - - LIIFOLDO_00290 435591.BDI_1004 1.85e-118 338.0 COG1376@1|root,COG1376@2|Bacteria,4NWHD@976|Bacteroidetes,2FUIN@200643|Bacteroidia 976|Bacteroidetes S L,D-transpeptidase catalytic domain - - - - - - - - - - - - YkuD LIIFOLDO_00296 435591.BDI_1009 2.64e-51 169.0 2BHC4@1|root,32BDT@2|Bacteria,4PJD9@976|Bacteroidetes,2FTY2@200643|Bacteroidia 976|Bacteroidetes S zinc-ribbon domain - - - - - - - - - - - - zinc_ribbon_2 LIIFOLDO_00297 435591.BDI_1010 6.2e-129 367.0 COG4640@1|root,COG4640@2|Bacteria,4PIJG@976|Bacteroidetes,2FTJN@200643|Bacteroidia,231A8@171551|Porphyromonadaceae 976|Bacteroidetes S response to antibiotic - - - - - - - - - - - - zinc_ribbon_2 LIIFOLDO_00298 435591.BDI_1011 1.12e-129 378.0 arCOG11957@1|root,2Z84N@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - LIIFOLDO_00300 435591.BDI_1014 0.0 1098.0 COG2759@1|root,COG2759@2|Bacteria,4NG3E@976|Bacteroidetes,2FMAE@200643|Bacteroidia,22XGR@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the formate--tetrahydrofolate ligase family fhs - 6.3.4.3 ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 M00140,M00377 R00943 RC00026,RC00111 ko00000,ko00001,ko00002,ko01000 - - - FTHFS LIIFOLDO_00301 435591.BDI_1015 4.37e-119 340.0 COG3968@1|root,COG3968@2|Bacteria 2|Bacteria S glutamine synthetase glnA - 6.3.1.2 ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 - R00253 RC00010,RC02798 ko00000,ko00001,ko01000,ko04147 - - - GSIII_N,Gln-synt_C LIIFOLDO_00302 435591.BDI_1016 3.41e-168 469.0 COG2243@1|root,COG2243@2|Bacteria,4NMRW@976|Bacteroidetes,2FNTI@200643|Bacteroidia,22XNP@171551|Porphyromonadaceae 976|Bacteroidetes H Precorrin-2 C20-methyltransferase - - 2.1.1.130,2.1.1.151 ko:K03394 ko00860,ko01100,map00860,map01100 - R03948,R05808 RC00003,RC01035,RC01662 ko00000,ko00001,ko01000 - - - TP_methylase LIIFOLDO_00303 435591.BDI_1017 9.52e-286 780.0 COG0614@1|root,COG0614@2|Bacteria,4NH9F@976|Bacteroidetes,2FMDS@200643|Bacteroidia,22WR0@171551|Porphyromonadaceae 976|Bacteroidetes P Periplasmic binding protein - - - ko:K02016 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko02000 3.A.1.14 - - Peripla_BP_2 LIIFOLDO_00304 435591.BDI_1018 1.46e-229 634.0 COG0609@1|root,COG0609@2|Bacteria,4NEDU@976|Bacteroidetes,2FNDK@200643|Bacteroidia,22WJI@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily - - - ko:K02015 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko02000 3.A.1.14 - - FecCD LIIFOLDO_00305 435591.BDI_1019 4.2e-241 662.0 COG1120@1|root,COG1120@2|Bacteria,4NG1Q@976|Bacteroidetes,2FMCI@200643|Bacteroidia,22XBW@171551|Porphyromonadaceae 976|Bacteroidetes HP ABC transporter, ATP-binding protein fhuC - 3.6.3.34 ko:K02013 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.14 - - ABC_tran LIIFOLDO_00306 435591.BDI_1020 1.96e-225 620.0 COG2207@1|root,COG2207@2|Bacteria,4NDYY@976|Bacteroidetes,2FNFA@200643|Bacteroidia,22ZEU@171551|Porphyromonadaceae 976|Bacteroidetes K transcriptional regulator (AraC family) - - - - - - - - - - - - HTH_18 LIIFOLDO_00308 435591.BDI_1021 2.9e-253 694.0 COG4974@1|root,COG4974@2|Bacteria,4P3P9@976|Bacteroidetes,2FXVJ@200643|Bacteroidia,230FJ@171551|Porphyromonadaceae 976|Bacteroidetes L Phage integrase SAM-like domain - - - - - - - - - - - - Phage_int_SAM_5,Phage_integrase LIIFOLDO_00309 435591.BDI_1022 0.0 2186.0 COG0446@1|root,COG0665@1|root,COG1143@1|root,COG2080@1|root,COG0446@2|Bacteria,COG0665@2|Bacteria,COG1143@2|Bacteria,COG2080@2|Bacteria 2|Bacteria C 2 iron, 2 sulfur cluster binding - - 1.2.5.3,1.3.99.16 ko:K03518,ko:K07302,ko:K18930 - - R11168 RC02800 ko00000,ko01000 - - - Pyr_redox_2,Pyr_redox_3 LIIFOLDO_00311 435591.BDI_1024 8.02e-60 185.0 2A1BY@1|root,30PIV@2|Bacteria,4PHRF@976|Bacteroidetes,2FTNE@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00312 435591.BDI_1025 1.77e-102 298.0 293T3@1|root,2ZR8H@2|Bacteria,4NMK3@976|Bacteroidetes 976|Bacteroidetes S Protein of unknown function (DUF2975) - - - - - - - - - - - - DUF2975 LIIFOLDO_00313 485918.Cpin_5711 3.68e-34 117.0 COG3655@1|root,COG3655@2|Bacteria,4NUP7@976|Bacteroidetes,1IT96@117747|Sphingobacteriia 976|Bacteroidetes K Cro/C1-type HTH DNA-binding domain - - - ko:K07727 - - - - ko00000,ko03000 - - - HTH_26 LIIFOLDO_00314 435591.BDI_1026 5.27e-67 204.0 COG4828@1|root,COG4828@2|Bacteria,4P3MD@976|Bacteroidetes,2G2GP@200643|Bacteroidia 976|Bacteroidetes S Protein of unknown function (DUF1622) - - - - - - - - - - - - DUF1622 LIIFOLDO_00316 435591.BDI_1027 2.59e-49 156.0 2E9BS@1|root,32TZH@2|Bacteria,4PPYE@976|Bacteroidetes,2G1AJ@200643|Bacteroidia,230XY@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF2492) - - - - - - - - - - - - DUF2492 LIIFOLDO_00318 1121094.KB894649_gene1199 5.79e-254 715.0 2DBVW@1|root,2ZBDE@2|Bacteria,4NIA9@976|Bacteroidetes,2FPE2@200643|Bacteroidia,4APFN@815|Bacteroidaceae 976|Bacteroidetes S Putative carbohydrate metabolism domain - - - - - - - - - - - - PCMD LIIFOLDO_00319 435591.BDI_2796 7.22e-146 414.0 COG3170@1|root,COG3170@2|Bacteria,4NMEM@976|Bacteroidetes,2FQ49@200643|Bacteroidia,22ZRT@171551|Porphyromonadaceae 976|Bacteroidetes NU Tfp pilus assembly protein FimV - - - - - - - - - - - - - LIIFOLDO_00320 693979.Bache_3262 1.32e-145 442.0 2DVAV@1|root,33V2T@2|Bacteria,4P2HB@976|Bacteroidetes,2FQSD@200643|Bacteroidia,4ANBJ@815|Bacteroidaceae 976|Bacteroidetes S Domain of unknown function (DUF4493) - - - - - - - - - - - - DUF4493,PCMD LIIFOLDO_00322 693979.Bache_3260 1.04e-39 145.0 2A9KV@1|root,30YTF@2|Bacteria,4PCR4@976|Bacteroidetes,2FT3M@200643|Bacteroidia,4AVQ4@815|Bacteroidaceae 976|Bacteroidetes S Domain of unknown function (DUF4493) - - - - - - - - - - - - DUF4493 LIIFOLDO_00323 435591.BDI_2802 1.97e-175 492.0 COG2207@1|root,COG2207@2|Bacteria,4NKDR@976|Bacteroidetes,2FP0U@200643|Bacteroidia,22Y8B@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix, arabinose operon control protein - - - - - - - - - - - - AraC_binding,HTH_18 LIIFOLDO_00324 435591.BDI_2803 0.0 996.0 COG0606@1|root,COG0606@2|Bacteria,4NE0G@976|Bacteroidetes,2FMHE@200643|Bacteroidia,22W0Y@171551|Porphyromonadaceae 976|Bacteroidetes O magnesium chelatase comM - - ko:K07391 - - - - ko00000 - - - ChlI,Mg_chelatase,Mg_chelatase_C LIIFOLDO_00325 435591.BDI_2804 1.58e-262 719.0 COG0526@1|root,COG0526@2|Bacteria,4NRAI@976|Bacteroidetes,2FSX6@200643|Bacteroidia,22YDF@171551|Porphyromonadaceae 976|Bacteroidetes CO Domain of unknown function (DUF4369) - - - - - - - - - - - - AhpC-TSA,DUF4369,Thioredoxin_8 LIIFOLDO_00326 435591.BDI_2805 0.0 1080.0 COG1866@1|root,COG1866@2|Bacteria,4NEGI@976|Bacteroidetes,2FNYK@200643|Bacteroidia,22VYR@171551|Porphyromonadaceae 976|Bacteroidetes H Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA pckA GO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0019318,GO:0019319,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0071704,GO:1901576 4.1.1.49 ko:K01610 ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200 M00003,M00170 R00341 RC00002,RC02741 ko00000,ko00001,ko00002,ko01000 - - - PEPCK_ATP LIIFOLDO_00327 435591.BDI_2806 5.84e-253 692.0 COG1013@1|root,COG1013@2|Bacteria,4NIE0@976|Bacteroidetes,2FME7@200643|Bacteroidia,22VVU@171551|Porphyromonadaceae 976|Bacteroidetes C ferredoxin oxidoreductase subunit beta oorB - 1.2.7.11,1.2.7.3 ko:K00175 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00009,M00011,M00173,M00620 R01196,R01197 RC00004,RC02742,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - TPP_enzyme_C LIIFOLDO_00328 435591.BDI_2807 0.0 1222.0 COG0674@1|root,COG1014@1|root,COG0674@2|Bacteria,COG1014@2|Bacteria,4NEP3@976|Bacteroidetes,2FN08@200643|Bacteroidia,22WBU@171551|Porphyromonadaceae 976|Bacteroidetes C 2-oxoacid acceptor oxidoreductase, alpha subunit porA - 1.2.7.11,1.2.7.3 ko:K00174 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00009,M00011,M00173,M00620 R01196,R01197 RC00004,RC02742,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - PFOR_II,POR,POR_N LIIFOLDO_00329 435591.BDI_2808 2.25e-283 775.0 COG0686@1|root,COG0686@2|Bacteria,4NE8F@976|Bacteroidetes,2FP71@200643|Bacteroidia,22XBI@171551|Porphyromonadaceae 976|Bacteroidetes E Alanine dehydrogenase/PNT, N-terminal domain ald - 1.4.1.1 ko:K00259 ko00250,ko00430,ko01100,map00250,map00430,map01100 - R00396 RC00008 ko00000,ko00001,ko01000 - - - AlaDh_PNT_C,AlaDh_PNT_N LIIFOLDO_00330 435591.BDI_2809 3.18e-118 338.0 COG0703@1|root,COG0703@2|Bacteria,4NQ73@976|Bacteroidetes,2FM3K@200643|Bacteroidia,22Y40@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate aroK GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 ko:K00891 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R02412 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 - - - SKI LIIFOLDO_00331 435591.BDI_2810 0.0 1380.0 COG3391@1|root,COG3391@2|Bacteria,4NM77@976|Bacteroidetes,2FPED@200643|Bacteroidia,22ZNY@171551|Porphyromonadaceae 976|Bacteroidetes S amine dehydrogenase activity - - - - - - - - - - - - - LIIFOLDO_00332 435591.BDI_2811 4.37e-285 778.0 COG1215@1|root,COG1215@2|Bacteria,4NFI8@976|Bacteroidetes,2FQAZ@200643|Bacteroidia,22W2Z@171551|Porphyromonadaceae 976|Bacteroidetes M Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - GT87 LIIFOLDO_00333 435591.BDI_2812 1.83e-174 486.0 COG1215@1|root,COG1215@2|Bacteria,4NQWJ@976|Bacteroidetes,2FQJ6@200643|Bacteroidia,230NM@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyl transferase family 2 - - - - - - - - - - - - Glycos_transf_2 LIIFOLDO_00334 435591.BDI_2813 2.08e-198 548.0 COG0726@1|root,COG0726@2|Bacteria,4NHXH@976|Bacteroidetes,2FP7V@200643|Bacteroidia,22Z1G@171551|Porphyromonadaceae 976|Bacteroidetes G Polysaccharide deacetylase - - - - - - - - - - - - DUF3473,Polysacc_deac_1 LIIFOLDO_00335 435591.BDI_2814 3.44e-152 427.0 COG0328@1|root,COG3341@1|root,COG0328@2|Bacteria,COG3341@2|Bacteria,4NI01@976|Bacteroidetes,2FMEU@200643|Bacteroidia,22XM6@171551|Porphyromonadaceae 976|Bacteroidetes L Ribonuclease H rnhA - 3.1.26.4 ko:K03469 ko03030,map03030 - - - ko00000,ko00001,ko01000,ko03032 - - - Cauli_VI,RNase_H LIIFOLDO_00336 435591.BDI_2815 1.44e-275 753.0 COG0438@1|root,COG0438@2|Bacteria,4NETA@976|Bacteroidetes,2FQ0S@200643|Bacteroidia,22WCB@171551|Porphyromonadaceae 976|Bacteroidetes M Mannosyltransferase - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 LIIFOLDO_00337 435591.BDI_2816 3.68e-255 699.0 COG0438@1|root,COG0438@2|Bacteria,4NVTH@976|Bacteroidetes,2FN27@200643|Bacteroidia,22ZSA@171551|Porphyromonadaceae 976|Bacteroidetes M Group 1 family - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 LIIFOLDO_00338 435591.BDI_2817 3.64e-219 603.0 2C23X@1|root,31B63@2|Bacteria,4NS2W@976|Bacteroidetes,2FT67@200643|Bacteroidia,22YVH@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00339 435591.BDI_2818 3.16e-178 496.0 COG3642@1|root,COG3642@2|Bacteria,4NIJK@976|Bacteroidetes,2FPB2@200643|Bacteroidia,22XXE@171551|Porphyromonadaceae 976|Bacteroidetes T Lipopolysaccharide kinase (Kdo/WaaP) family - - - - - - - - - - - - Kdo LIIFOLDO_00340 435591.BDI_2819 7.14e-256 701.0 COG0859@1|root,COG0859@2|Bacteria,4NEPH@976|Bacteroidetes,2FMP7@200643|Bacteroidia,22XC7@171551|Porphyromonadaceae 976|Bacteroidetes M glycosyl transferase family - - - ko:K02843 ko00540,ko01100,map00540,map01100 M00080 - - ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 - GT9 - Glyco_transf_9 LIIFOLDO_00341 435591.BDI_2820 1.52e-141 399.0 COG0463@1|root,COG0463@2|Bacteria,4NGJK@976|Bacteroidetes,2FM49@200643|Bacteroidia,22X83@171551|Porphyromonadaceae 976|Bacteroidetes M Protein of unknown function (DUF4254) - - - - - - - - - - - - DUF4254 LIIFOLDO_00342 435591.BDI_2821 4.84e-160 448.0 COG0745@1|root,COG0745@2|Bacteria,4NKVJ@976|Bacteroidetes,2FNYS@200643|Bacteroidia,22XHK@171551|Porphyromonadaceae 976|Bacteroidetes KT Transcriptional regulatory protein, C terminal - - - - - - - - - - - - Response_reg,Trans_reg_C LIIFOLDO_00343 411477.PARMER_02829 3.72e-181 522.0 COG0642@1|root,COG2205@2|Bacteria,4NJKX@976|Bacteroidetes,2FPF2@200643|Bacteroidia,22WU9@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - 2.7.13.3 ko:K07636 ko02020,map02020 M00434 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - HATPase_c LIIFOLDO_00344 411477.PARMER_02824 8.35e-115 339.0 2E380@1|root,32Y7Q@2|Bacteria,4NN04@976|Bacteroidetes,2FM58@200643|Bacteroidia,22YHN@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (Porph_ging) - - - - - - - - - - - - Porph_ging LIIFOLDO_00345 435591.BDI_2823 0.0 1501.0 COG1629@1|root,COG1629@2|Bacteria,4NF6X@976|Bacteroidetes,2FPI0@200643|Bacteroidia,22WGP@171551|Porphyromonadaceae 976|Bacteroidetes P Psort location OuterMembrane, score - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg LIIFOLDO_00346 435591.BDI_2824 6.69e-283 773.0 COG0477@1|root,COG2814@2|Bacteria,4NE7F@976|Bacteroidetes,2FQAA@200643|Bacteroidia,22VYY@171551|Porphyromonadaceae 976|Bacteroidetes EGP Major Facilitator Superfamily - - - - - - - - - - - - MFS_1,MFS_1_like,Sugar_tr LIIFOLDO_00348 435591.BDI_2825 3.22e-268 734.0 COG0111@1|root,COG0111@2|Bacteria,4NGEB@976|Bacteroidetes,2FMMV@200643|Bacteroidia,22X0T@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate pdxB - 1.1.1.290 ko:K03473 ko00750,ko01100,map00750,map01100 M00124 R04210 RC00084 ko00000,ko00001,ko00002,ko01000 - - - 2-Hacid_dh,2-Hacid_dh_C,DUF3410 LIIFOLDO_00349 435591.BDI_2826 2.11e-127 362.0 COG0299@1|root,COG0299@2|Bacteria,4NNZP@976|Bacteroidetes,2FPNN@200643|Bacteroidia,22XY4@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate purN - 2.1.2.2 ko:K11175 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 M00048 R04325,R04326 RC00026,RC00197,RC01128 ko00000,ko00001,ko00002,ko01000 - - - Formyl_trans_N LIIFOLDO_00350 411477.PARMER_02813 4.31e-44 143.0 COG0236@1|root,COG0236@2|Bacteria,4NS6C@976|Bacteroidetes,2FTWG@200643|Bacteroidia,22YF4@171551|Porphyromonadaceae 976|Bacteroidetes IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis acpP GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - ko:K02078 - - - - ko00000,ko00001 - - - PP-binding LIIFOLDO_00351 435591.BDI_2827 1.47e-304 830.0 COG0304@1|root,COG0304@2|Bacteria,4NEKC@976|Bacteroidetes,2FNDB@200643|Bacteroidia,22W73@171551|Porphyromonadaceae 976|Bacteroidetes I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP fabF - 2.3.1.179 ko:K09458 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 M00083,M00572 R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119 RC00039,RC02728,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Ketoacyl-synt_C,ketoacyl-synt LIIFOLDO_00352 435591.BDI_2828 1.83e-195 542.0 COG0571@1|root,COG0571@2|Bacteria,4NE0N@976|Bacteroidetes,2FMV3@200643|Bacteroidia,22W54@171551|Porphyromonadaceae 976|Bacteroidetes J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism rnc GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 ko:K03685 ko03008,ko05205,map03008,map05205 - - - ko00000,ko00001,ko01000,ko03009,ko03019,ko03036 - - - Ribonucleas_3_3,dsrm LIIFOLDO_00353 435591.BDI_2829 0.0 1709.0 COG3591@1|root,COG4412@1|root,COG3591@2|Bacteria,COG4412@2|Bacteria,4NG2K@976|Bacteroidetes,2FNQS@200643|Bacteroidia,22XGI@171551|Porphyromonadaceae 976|Bacteroidetes E Leucine-rich repeat (LRR) protein - - 3.4.21.50 ko:K01337 - - - - ko00000,ko01000,ko01002 - - - Trypsin,Trypsin_2 LIIFOLDO_00354 435591.BDI_2830 9.62e-247 677.0 COG0205@1|root,COG0205@2|Bacteria,4NGN7@976|Bacteroidetes,2FNIF@200643|Bacteroidia,22X1H@171551|Porphyromonadaceae 976|Bacteroidetes G Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis pfkA - 2.7.1.11,2.7.1.90 ko:K21071 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130 - R00756,R00764,R02073,R03236,R04779 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PFK LIIFOLDO_00355 435591.BDI_2831 0.0 1034.0 COG1541@1|root,COG1541@2|Bacteria,4NFRI@976|Bacteroidetes,2FMJX@200643|Bacteroidia,22WCF@171551|Porphyromonadaceae 976|Bacteroidetes H GH3 auxin-responsive promoter - - - - - - - - - - - - GH3 LIIFOLDO_00356 435591.BDI_2832 1.57e-191 531.0 COG0671@1|root,COG0671@2|Bacteria,4NJEX@976|Bacteroidetes,2G39P@200643|Bacteroidia,22XX7@171551|Porphyromonadaceae 976|Bacteroidetes I Acid phosphatase homologues - - - - - - - - - - - - PAP2 LIIFOLDO_00357 435591.BDI_2833 0.0 1231.0 COG5434@1|root,COG5434@2|Bacteria,4NDWX@976|Bacteroidetes,2FMZA@200643|Bacteroidia,22X8E@171551|Porphyromonadaceae 976|Bacteroidetes M Parallel beta-helix repeats glaB - - - - - - - - - - - Beta_helix LIIFOLDO_00358 435591.BDI_2834 6.75e-306 833.0 COG5000@1|root,COG5000@2|Bacteria,4NEWF@976|Bacteroidetes,2FP7E@200643|Bacteroidia,22ZIA@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase-like ATPases - - - - - - - - - - - - HATPase_c,PAS_8 LIIFOLDO_00359 435591.BDI_2835 0.0 873.0 COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,2FMTU@200643|Bacteroidia,22WJK@171551|Porphyromonadaceae 976|Bacteroidetes T Sigma-54 interaction domain - - - - - - - - - - - - HTH_8,Response_reg,Sigma54_activat LIIFOLDO_00360 435591.BDI_2836 0.0 1523.0 COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,2FRFS@200643|Bacteroidia,231GX@171551|Porphyromonadaceae 976|Bacteroidetes V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD LIIFOLDO_00361 435591.BDI_2837 0.0 947.0 COG0215@1|root,COG0215@2|Bacteria,4NE3Y@976|Bacteroidetes,2FM9D@200643|Bacteroidia,22WDE@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the class-I aminoacyl-tRNA synthetase family cysS - 6.1.1.16 ko:K01883 ko00970,map00970 M00359,M00360 R03650 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - DALR_2,tRNA-synt_1e LIIFOLDO_00362 435591.BDI_2838 1.47e-91 268.0 COG2050@1|root,COG2050@2|Bacteria,4NM7W@976|Bacteroidetes,2FS5M@200643|Bacteroidia,22YUF@171551|Porphyromonadaceae 976|Bacteroidetes Q Thioesterase superfamily paaI - - ko:K02614 ko00360,map00360 - R09840 RC00004,RC00014 ko00000,ko00001,ko01000 - - - 4HBT LIIFOLDO_00363 435591.BDI_2839 2.1e-214 591.0 2DBTB@1|root,2ZAWY@2|Bacteria,4NIYP@976|Bacteroidetes,2G3EG@200643|Bacteroidia,22YQA@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3108) - - - - - - - - - - - - DUF3108 LIIFOLDO_00364 435591.BDI_2840 0.0 1268.0 COG4704@1|root,COG4704@2|Bacteria,4NGPF@976|Bacteroidetes,2FNAC@200643|Bacteroidia,22WR4@171551|Porphyromonadaceae 976|Bacteroidetes S Bacterial Ig-like domain - - - - - - - - - - - - Big_5,fn3_3 LIIFOLDO_00365 435591.BDI_2841 5.44e-247 692.0 COG1404@1|root,COG1404@2|Bacteria 2|Bacteria O Belongs to the peptidase S8 family - - - - - - - - - - - - Big_2,Peptidase_S8,SLH,SdrD_B,VCBS LIIFOLDO_00369 435591.BDI_2846 0.0 873.0 28HQ3@1|root,2Z7XW@2|Bacteria,4NF9H@976|Bacteroidetes,2FPMP@200643|Bacteroidia,22VUD@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF2851) - - - - - - - - - - - - DUF2851 LIIFOLDO_00370 435591.BDI_2847 4.84e-170 474.0 COG0289@1|root,COG0289@2|Bacteria,4NDX2@976|Bacteroidetes,2FNUW@200643|Bacteroidia,22VX2@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the DapB family dapB - 1.17.1.8 ko:K00215 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R04198,R04199 RC00478 ko00000,ko00001,ko00002,ko01000 - - - DapB_C,DapB_N LIIFOLDO_00371 435591.BDI_2848 0.0 974.0 COG0681@1|root,COG0681@2|Bacteria,4NFTP@976|Bacteroidetes,2FNMS@200643|Bacteroidia,22W4M@171551|Porphyromonadaceae 976|Bacteroidetes U Belongs to the peptidase S26 family lepB - 3.4.21.89 ko:K03100 ko02024,ko03060,map02024,map03060 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_S24,Peptidase_S26 LIIFOLDO_00372 435591.BDI_2849 6.47e-208 574.0 COG0681@1|root,COG0681@2|Bacteria,4NQT3@976|Bacteroidetes,2FPB0@200643|Bacteroidia,22YM4@171551|Porphyromonadaceae 976|Bacteroidetes U Belongs to the peptidase S26 family lepB_1 - 3.4.21.89 ko:K03100 ko02024,ko03060,map02024,map03060 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_S24 LIIFOLDO_00373 435591.BDI_2850 2.53e-153 430.0 COG0224@1|root,COG0224@2|Bacteria,4NM5H@976|Bacteroidetes,2FNPU@200643|Bacteroidia,22XN5@171551|Porphyromonadaceae 976|Bacteroidetes C WbqC-like protein - - - - - - - - - - - - WbqC LIIFOLDO_00374 435591.BDI_2851 4.73e-266 728.0 COG0075@1|root,COG0075@2|Bacteria,4NH61@976|Bacteroidetes,2FP5I@200643|Bacteroidia,22X2A@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily phnW - 2.6.1.37 ko:K03430 ko00440,ko01100,ko01120,map00440,map01100,map01120 - R04152 RC00008,RC00062 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_5 LIIFOLDO_00375 435591.BDI_2852 1.29e-187 521.0 COG0637@1|root,COG0637@2|Bacteria,4NIYB@976|Bacteroidetes,2FM33@200643|Bacteroidia,22WA4@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the HAD-like hydrolase superfamily. PhnX family phnX - 3.11.1.1 ko:K05306 ko00440,ko01100,ko01120,map00440,map01100,map01120 - R00747 RC00368 ko00000,ko00001,ko01000 - - - HAD_2 LIIFOLDO_00376 435591.BDI_2853 2e-310 848.0 2C31A@1|root,2Z7UP@2|Bacteria,4NECU@976|Bacteroidetes,2FPEI@200643|Bacteroidia,22VWH@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - - LIIFOLDO_00377 435591.BDI_2854 3.59e-207 573.0 28IAJ@1|root,2Z8D5@2|Bacteria,4NJNA@976|Bacteroidetes,2FQ8K@200643|Bacteroidia,22WD2@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00378 435591.BDI_2855 0.0 1389.0 COG0306@1|root,COG0306@2|Bacteria,4NFCB@976|Bacteroidetes,2FN8Q@200643|Bacteroidia,22WHP@171551|Porphyromonadaceae 976|Bacteroidetes U Phosphate transporter - - - - - - - - - - - - PHO4 LIIFOLDO_00379 435591.BDI_2856 1.24e-122 350.0 COG1595@1|root,COG1595@2|Bacteria,4NR0P@976|Bacteroidetes,2FN1H@200643|Bacteroidia 976|Bacteroidetes K RNA polymerase sigma-70 factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 LIIFOLDO_00380 435591.BDI_2864 4.91e-144 406.0 2ENZM@1|root,33GKH@2|Bacteria,4NXMR@976|Bacteroidetes,2FUXH@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00381 435591.BDI_2865 2.25e-49 156.0 28ZY9@1|root,2ZMNR@2|Bacteria,4P7N8@976|Bacteroidetes,2FVZY@200643|Bacteroidia,23197@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4248) - - - - - - - - - - - - DUF4248 LIIFOLDO_00383 435591.BDI_2867 3.25e-48 153.0 2C3RQ@1|root,2ZPRF@2|Bacteria,4P856@976|Bacteroidetes,2FZMX@200643|Bacteroidia,2317N@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00385 435591.BDI_2868 7.89e-309 840.0 2A58H@1|root,30TXN@2|Bacteria,4NPD1@976|Bacteroidetes,2FQJR@200643|Bacteroidia,22Y14@171551|Porphyromonadaceae 976|Bacteroidetes S 6-bladed beta-propeller - - - - - - - - - - - - DUF5128 LIIFOLDO_00386 435591.BDI_2869 2.79e-121 347.0 COG1672@1|root,COG1672@2|Bacteria,4NJHR@976|Bacteroidetes,2G2GK@200643|Bacteroidia,231IS@171551|Porphyromonadaceae 976|Bacteroidetes S ATPase domain predominantly from Archaea - - - - - - - - - - - - ATPase_2 LIIFOLDO_00387 435591.BDI_2870 1.74e-92 271.0 COG0776@1|root,COG0776@2|Bacteria,4NRX9@976|Bacteroidetes,2G1QD@200643|Bacteroidia,2310J@171551|Porphyromonadaceae 976|Bacteroidetes L DNA-binding protein - - - - - - - - - - - - Bac_DNA_binding,HU-DNA_bdg LIIFOLDO_00388 435591.BDI_2871 1.19e-116 333.0 COG3023@1|root,COG3023@2|Bacteria,4P37K@976|Bacteroidetes,2FRZB@200643|Bacteroidia,230AI@171551|Porphyromonadaceae 976|Bacteroidetes V N-acetylmuramoyl-L-alanine amidase - - 3.5.1.28 ko:K01447 - - R04112 RC00064,RC00141 ko00000,ko01000 - - - Amidase_2 LIIFOLDO_00389 435591.BDI_2872 2.79e-228 629.0 COG3712@1|root,COG3712@2|Bacteria,4NMA2@976|Bacteroidetes,2FXKB@200643|Bacteroidia 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR LIIFOLDO_00390 435591.BDI_2873 0.0 2087.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FWS8@200643|Bacteroidia,22WS3@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_00391 435591.BDI_2874 0.0 1074.0 COG3637@1|root,COG3637@2|Bacteria,4NE4Y@976|Bacteroidetes,2FP8W@200643|Bacteroidia 976|Bacteroidetes M SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_00392 435591.BDI_2875 0.0 1092.0 COG0673@1|root,COG0673@2|Bacteria,4NEN5@976|Bacteroidetes 976|Bacteroidetes S Pfam Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA LIIFOLDO_00393 435591.BDI_2876 5.75e-203 560.0 COG2152@1|root,COG2152@2|Bacteria,4NGDZ@976|Bacteroidetes,2FPFW@200643|Bacteroidia,22WNS@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080 LIIFOLDO_00394 435591.BDI_2877 2.5e-173 483.0 COG0363@1|root,COG0363@2|Bacteria,4NPBJ@976|Bacteroidetes,2FNEN@200643|Bacteroidia 976|Bacteroidetes G COG0363 6-phosphogluconolactonase Glucosamine-6-phosphate isomerase deaminase - - 3.5.99.6 ko:K02080,ko:K02564 ko00052,ko00520,ko01100,map00052,map00520,map01100 - R00765,R08365 RC00163 ko00000,ko00001,ko01000 - - - Glucosamine_iso LIIFOLDO_00395 435591.BDI_2878 5.14e-216 597.0 COG1940@1|root,COG1940@2|Bacteria,4NFZ1@976|Bacteroidetes,2FNGN@200643|Bacteroidia,22WUD@171551|Porphyromonadaceae 976|Bacteroidetes G glucokinase - - 2.7.1.2 ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 M00001,M00549 R00299,R01600,R01786 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - ROK LIIFOLDO_00396 435591.BDI_2879 5.73e-281 770.0 COG0738@1|root,COG0738@2|Bacteria,4NEB2@976|Bacteroidetes,2FMGI@200643|Bacteroidia 976|Bacteroidetes G Transporter, major facilitator family protein - - - - - - - - - - - - MFS_1 LIIFOLDO_00397 435591.BDI_2880 0.0 1355.0 COG1082@1|root,COG1082@2|Bacteria,4NEWC@976|Bacteroidetes,2FPPH@200643|Bacteroidia,231G9@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl-hydrolase 97 N-terminal - - 3.2.1.20 ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 - R00028,R00801,R00802,R06087,R06088 RC00028,RC00049,RC00077 ko00000,ko00001,ko01000 - GH31 - GH97_C,GH97_N,Glyco_hydro_97 LIIFOLDO_00398 435591.BDI_2881 1.49e-164 461.0 COG1179@1|root,COG1179@2|Bacteria,4NEKB@976|Bacteroidetes,2FMG4@200643|Bacteroidia,22XGU@171551|Porphyromonadaceae 976|Bacteroidetes H COGs COG1179 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 1 hypB - - ko:K22132 - - - - ko00000,ko03016 - - - ThiF LIIFOLDO_00399 435591.BDI_2882 2.69e-148 418.0 COG1136@1|root,COG1136@2|Bacteria,4NGDU@976|Bacteroidetes,2FKZC@200643|Bacteroidia,22W92@171551|Porphyromonadaceae 976|Bacteroidetes V Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner lolD - - ko:K09810 ko02010,map02010 M00255 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.125 - - ABC_tran LIIFOLDO_00400 435591.BDI_2883 0.0 2915.0 2AA76@1|root,33YH5@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - LIIFOLDO_00402 435591.BDI_2885 1.86e-248 684.0 28KZ4@1|root,2ZAEH@2|Bacteria,4NJXC@976|Bacteroidetes,2FQ0I@200643|Bacteroidia 976|Bacteroidetes S COG NOG32009 non supervised orthologous group - - - - - - - - - - - - Mfa2 LIIFOLDO_00403 435591.BDI_2886 0.0 1387.0 2F0IW@1|root,33TMK@2|Bacteria,4P1M8@976|Bacteroidetes,2FNSM@200643|Bacteroidia,2311U@171551|Porphyromonadaceae 976|Bacteroidetes S Major fimbrial subunit protein type IV, Fimbrillin, C-terminal - - - - - - - - - - - - Fimbrillin_C LIIFOLDO_00404 435591.BDI_2887 0.0 910.0 COG2885@1|root,COG2885@2|Bacteria,4NJN8@976|Bacteroidetes,2FMCB@200643|Bacteroidia,22X1J@171551|Porphyromonadaceae 976|Bacteroidetes M Domain of unknown function, B. Theta Gene description (DUF3868) - - - - - - - - - - - - DUF3868 LIIFOLDO_00405 435591.BDI_2888 2.46e-149 419.0 COG2885@1|root,COG2885@2|Bacteria,4NN9C@976|Bacteroidetes,2FPCM@200643|Bacteroidia,22XYT@171551|Porphyromonadaceae 976|Bacteroidetes M Protein of unknown function (DUF3575) - - - - - - - - - - - - DUF3575 LIIFOLDO_00406 435591.BDI_2889 5.2e-226 623.0 COG4974@1|root,COG4974@2|Bacteria,4P01T@976|Bacteroidetes,2FNQ0@200643|Bacteroidia,22WIY@171551|Porphyromonadaceae 976|Bacteroidetes L COG NOG11942 non supervised orthologous group - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase LIIFOLDO_00407 435591.BDI_2890 0.0 875.0 COG0733@1|root,COG0733@2|Bacteria,4NGQ5@976|Bacteroidetes,2FMVD@200643|Bacteroidia,22X4U@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family - - - ko:K03308 - - - - ko00000 2.A.22.4,2.A.22.5 - - SNF LIIFOLDO_00408 435591.BDI_2891 3.13e-168 470.0 COG1555@1|root,COG1555@2|Bacteria,4NK4K@976|Bacteroidetes,2FPCH@200643|Bacteroidia,22Y5J@171551|Porphyromonadaceae 976|Bacteroidetes L Helix-hairpin-helix motif - - - - - - - - - - - - HHH_3 LIIFOLDO_00409 435591.BDI_2892 3.03e-181 504.0 COG3910@1|root,COG3910@2|Bacteria,4NNW5@976|Bacteroidetes,2FTH4@200643|Bacteroidia,230A1@171551|Porphyromonadaceae 976|Bacteroidetes S AAA ATPase domain - - - - - - - - - - - - AAA_15,AAA_21,AAA_23 LIIFOLDO_00410 435591.BDI_2893 2.01e-123 351.0 COG1853@1|root,COG1853@2|Bacteria,4NNFP@976|Bacteroidetes,2FPWU@200643|Bacteroidia,22XVU@171551|Porphyromonadaceae 976|Bacteroidetes S Conserved protein domain typically associated with flavoprotein - - - - - - - - - - - - Flavin_Reduct LIIFOLDO_00411 435591.BDI_2894 0.0 1553.0 COG1629@1|root,COG4771@2|Bacteria,4NFU8@976|Bacteroidetes,2G2FE@200643|Bacteroidia,22WQ8@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3 LIIFOLDO_00412 435591.BDI_2895 0.0 888.0 COG1115@1|root,COG1115@2|Bacteria,4NDX7@976|Bacteroidetes,2FMFZ@200643|Bacteroidia,22XG3@171551|Porphyromonadaceae 976|Bacteroidetes E Psort location CytoplasmicMembrane, score 10.00 agcS - - ko:K03310 - - - - ko00000 2.A.25 - - Na_Ala_symp LIIFOLDO_00413 435591.BDI_2896 2.13e-302 823.0 COG1317@1|root,COG1317@2|Bacteria,4NWPE@976|Bacteroidetes,2G39N@200643|Bacteroidia,2303S@171551|Porphyromonadaceae 976|Bacteroidetes NU Lipid A 3-O-deacylase (PagL) - - - - - - - - - - - - PagL LIIFOLDO_00414 435591.BDI_2897 9.4e-298 811.0 COG0612@1|root,COG0612@2|Bacteria,4NEE4@976|Bacteroidetes,2FN50@200643|Bacteroidia,22WUV@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the peptidase M16 family - - - - - - - - - - - - Peptidase_M16,Peptidase_M16_C LIIFOLDO_00415 435591.BDI_2898 0.0 1038.0 COG1672@1|root,COG1672@2|Bacteria,4NIJ4@976|Bacteroidetes,2FM14@200643|Bacteroidia,22VXI@171551|Porphyromonadaceae 976|Bacteroidetes S Predicted AAA-ATPase - - - - - - - - - - - - AAA-ATPase_like,PDDEXK_9 LIIFOLDO_00416 435591.BDI_2899 0.0 1149.0 COG2234@1|root,COG2234@2|Bacteria,4NFDJ@976|Bacteroidetes,2FNKJ@200643|Bacteroidia 976|Bacteroidetes S Peptidase family M28 - - - - - - - - - - - - PA,Peptidase_M28 LIIFOLDO_00417 435591.BDI_2900 5.95e-140 395.0 COG0794@1|root,COG0794@2|Bacteria,4NED8@976|Bacteroidetes,2FMXM@200643|Bacteroidia,22X6D@171551|Porphyromonadaceae 976|Bacteroidetes M Iron dicitrate transport regulator FecR kdsD - 5.3.1.13 ko:K06041 ko00540,ko01100,map00540,map01100 M00063 R01530 RC00541 ko00000,ko00001,ko00002,ko01000,ko01005 - - - CBS,SIS LIIFOLDO_00418 435591.BDI_2901 2.13e-229 630.0 COG0524@1|root,COG0524@2|Bacteria,4NG11@976|Bacteroidetes,2FMAX@200643|Bacteroidia,22XEA@171551|Porphyromonadaceae 976|Bacteroidetes G pfkB family carbohydrate kinase - - 2.7.1.4 ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 - R00760,R00867,R03920 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PfkB LIIFOLDO_00419 435591.BDI_2902 2.67e-251 689.0 COG2365@1|root,COG2365@2|Bacteria,4NMQ7@976|Bacteroidetes,2FMCH@200643|Bacteroidia,22XUN@171551|Porphyromonadaceae 976|Bacteroidetes T Tyrosine phosphatase family - - 3.1.3.48 ko:K01104 - - - - ko00000,ko01000 - - - Y_phosphatase3 LIIFOLDO_00420 435591.BDI_2906 0.0 1026.0 COG0513@1|root,COG0513@2|Bacteria,4NEJV@976|Bacteroidetes,2FMB6@200643|Bacteroidia,22W44@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the DEAD box helicase family - - 3.6.4.13 ko:K05592 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03009,ko03019 - - - DEAD,DbpA,Helicase_C LIIFOLDO_00421 1122971.BAME01000065_gene4762 3.84e-196 549.0 COG1506@1|root,COG1506@2|Bacteria,4NH1V@976|Bacteroidetes,2FP5Q@200643|Bacteroidia,22Z3S@171551|Porphyromonadaceae 976|Bacteroidetes E Prolyl oligopeptidase family - - - - - - - - - - - - Peptidase_S9 LIIFOLDO_00422 435591.BDI_2911 0.0 1090.0 COG4690@1|root,COG4690@2|Bacteria,4NEQE@976|Bacteroidetes,2FN3E@200643|Bacteroidia,22XFY@171551|Porphyromonadaceae 976|Bacteroidetes M Peptidase family C69 - - - - - - - - - - - - Peptidase_C69 LIIFOLDO_00423 435591.BDI_2912 6e-290 790.0 COG3579@1|root,COG3579@2|Bacteria,4NE02@976|Bacteroidetes,2FPW0@200643|Bacteroidia,22WUF@171551|Porphyromonadaceae 976|Bacteroidetes E Papain family cysteine protease - - 3.4.22.40 ko:K01372 - - - - ko00000,ko01000,ko01002 - - - Peptidase_C1,Peptidase_C1_2 LIIFOLDO_00424 435591.BDI_2913 0.0 1439.0 COG3591@1|root,COG3591@2|Bacteria,4NEAK@976|Bacteroidetes,2FMI1@200643|Bacteroidia,22W04@171551|Porphyromonadaceae 976|Bacteroidetes E peptidase dpp7 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005575,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008239,GO:0009056,GO:0009279,GO:0009987,GO:0016020,GO:0016787,GO:0017171,GO:0019538,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0033218,GO:0034641,GO:0042277,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044462,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - - - - - - - - - - Peptidase_S46 LIIFOLDO_00425 435591.BDI_2914 2.8e-311 850.0 COG1808@1|root,COG1808@2|Bacteria,4NDXI@976|Bacteroidetes,2FMJZ@200643|Bacteroidia,22X46@171551|Porphyromonadaceae 976|Bacteroidetes S membrane - - - - - - - - - - - - DUF389 LIIFOLDO_00426 435591.BDI_2915 0.0 1274.0 COG0642@1|root,COG2205@2|Bacteria,4NJCH@976|Bacteroidetes,2FMSB@200643|Bacteroidia,22ZEQ@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - HATPase_c,HisKA LIIFOLDO_00427 435591.BDI_2916 0.0 988.0 COG2244@1|root,COG2244@2|Bacteria,4NDZ0@976|Bacteroidetes,2FKYU@200643|Bacteroidia,22W09@171551|Porphyromonadaceae 976|Bacteroidetes S Polysaccharide biosynthesis protein cap - - - - - - - - - - - Polysacc_synt,Polysacc_synt_3,Polysacc_synt_C LIIFOLDO_00428 435591.BDI_2917 4.07e-242 665.0 COG2255@1|root,COG2255@2|Bacteria,4NEB9@976|Bacteroidetes,2FNZB@200643|Bacteroidia,22W3Z@171551|Porphyromonadaceae 976|Bacteroidetes L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing ruvB - 3.6.4.12 ko:K03551 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - RuvB_C,RuvB_N LIIFOLDO_00429 435591.BDI_2918 5.77e-289 788.0 COG3391@1|root,COG3391@2|Bacteria,4NE7W@976|Bacteroidetes,2FRHE@200643|Bacteroidia 976|Bacteroidetes S 6-bladed beta-propeller - - - - - - - - - - - - DUF5128 LIIFOLDO_00430 435591.BDI_2919 0.0 1044.0 COG1672@1|root,COG1672@2|Bacteria,4NIJ4@976|Bacteroidetes,2FM14@200643|Bacteroidia,22VXI@171551|Porphyromonadaceae 976|Bacteroidetes S Predicted AAA-ATPase - - - - - - - - - - - - AAA-ATPase_like,PDDEXK_9 LIIFOLDO_00431 435591.BDI_2919 6.36e-304 836.0 COG1672@1|root,COG1672@2|Bacteria,4NIJ4@976|Bacteroidetes,2FM14@200643|Bacteroidia,22VXI@171551|Porphyromonadaceae 976|Bacteroidetes S Predicted AAA-ATPase - - - - - - - - - - - - AAA-ATPase_like,PDDEXK_9 LIIFOLDO_00432 435591.BDI_0278 0.0 2077.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia,22ZQS@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec LIIFOLDO_00433 435591.BDI_0279 0.0 1244.0 COG1435@1|root,COG1435@2|Bacteria,4NGX8@976|Bacteroidetes,2FPJC@200643|Bacteroidia 976|Bacteroidetes F SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_00434 435591.BDI_0280 2.46e-218 602.0 COG1082@1|root,COG1082@2|Bacteria,4P0UK@976|Bacteroidetes 976|Bacteroidetes G Xylose isomerase-like TIM barrel - - - - - - - - - - - - AP_endonuc_2 LIIFOLDO_00435 435591.BDI_0281 5.91e-38 127.0 COG1983@1|root,COG1983@2|Bacteria,4NX1N@976|Bacteroidetes,2FUW2@200643|Bacteroidia 976|Bacteroidetes KT PspC domain protein - - - - - - - - - - - - PspC LIIFOLDO_00436 435591.BDI_0282 0.0 1302.0 COG0556@1|root,COG0556@2|Bacteria,4NE6E@976|Bacteroidetes,2FNBD@200643|Bacteroidia,22W4K@171551|Porphyromonadaceae 976|Bacteroidetes L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage uvrB - - ko:K03702 ko03420,map03420 - - - ko00000,ko00001,ko03400 - - - Helicase_C,ResIII,UVR,UvrB LIIFOLDO_00437 1235803.C825_00078 1.95e-112 333.0 COG0657@1|root,COG0657@2|Bacteria,4NGAF@976|Bacteroidetes,2FSWW@200643|Bacteroidia,22XU8@171551|Porphyromonadaceae 976|Bacteroidetes I Protein of unknown function (DUF1460) - - - - - - - - - - - - DUF1460 LIIFOLDO_00438 435591.BDI_0283 0.0 1471.0 28J0I@1|root,2Z8XQ@2|Bacteria,4NK3G@976|Bacteroidetes,2G08X@200643|Bacteroidia,22XSJ@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00439 435591.BDI_0284 1.27e-158 445.0 COG0664@1|root,COG0664@2|Bacteria,4NFB1@976|Bacteroidetes,2FNHP@200643|Bacteroidia,22WXA@171551|Porphyromonadaceae 976|Bacteroidetes K Crp Fnr family - - - ko:K21556 - - - - ko00000,ko03000 - - - HTH_Crp_2,cNMP_binding LIIFOLDO_00440 435591.BDI_0285 2.69e-186 518.0 COG2877@1|root,COG2877@2|Bacteria,4NENN@976|Bacteroidetes,2FN47@200643|Bacteroidia,22WRG@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the KdsA family kdsA - 2.5.1.55 ko:K01627 ko00540,ko01100,map00540,map01100 M00063 R03254 RC00435 ko00000,ko00001,ko00002,ko01000,ko01005 - - - DAHP_synth_1 LIIFOLDO_00441 435591.BDI_0286 8.94e-221 608.0 COG0324@1|root,COG0324@2|Bacteria,4NFJY@976|Bacteroidetes,2FM0H@200643|Bacteroidia,22W45@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) miaA2 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 - R01122 RC02820 ko00000,ko00001,ko01000,ko01006,ko03016 - - - IPPT LIIFOLDO_00442 435591.BDI_0287 2.53e-240 660.0 COG0057@1|root,COG0057@2|Bacteria,4NEMF@976|Bacteroidetes,2FMT7@200643|Bacteroidia,22WYI@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family gap - 1.2.1.12 ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 M00001,M00002,M00003,M00165,M00166,M00308,M00552 R01061 RC00149 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 - - - Gp_dh_C,Gp_dh_N LIIFOLDO_00443 1122931.AUAE01000016_gene2689 2.87e-46 152.0 2EG77@1|root,339Z4@2|Bacteria,4NYB3@976|Bacteroidetes,2FVKY@200643|Bacteroidia,22YYU@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00444 999419.HMPREF1077_01054 9.88e-63 195.0 2E0ZK@1|root,32WFU@2|Bacteria,4NTTI@976|Bacteroidetes,2FUB3@200643|Bacteroidia,22YHR@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - Phage_holin_3_6 LIIFOLDO_00445 1235803.C825_00070 1.15e-30 109.0 2EGGF@1|root,33A8G@2|Bacteria,4NXJX@976|Bacteroidetes,2FVM3@200643|Bacteroidia,22Z2H@171551|Porphyromonadaceae 976|Bacteroidetes S YtxH-like protein - - - - - - - - - - - - YtxH LIIFOLDO_00446 435591.BDI_0289 6.23e-209 577.0 COG2264@1|root,COG2264@2|Bacteria,4NFRW@976|Bacteroidetes,2FP0Q@200643|Bacteroidia,22VXF@171551|Porphyromonadaceae 976|Bacteroidetes J Ribosomal protein L11 methyltransferase prmA - - ko:K02687 - - - - ko00000,ko01000,ko03009 - - - PrmA LIIFOLDO_00447 435591.BDI_0290 1.66e-110 317.0 COG3023@1|root,COG3023@2|Bacteria,4NQ2J@976|Bacteroidetes,2FS4K@200643|Bacteroidia,230ES@171551|Porphyromonadaceae 976|Bacteroidetes V Ami_2 - - 3.5.1.28 ko:K01447 - - R04112 RC00064,RC00141 ko00000,ko01000 - - - Amidase_2 LIIFOLDO_00448 997884.HMPREF1068_01435 0.000116 40.8 2B9FP@1|root,322TM@2|Bacteria,4P9UJ@976|Bacteroidetes,2FVHI@200643|Bacteroidia,4ASKX@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00449 435591.BDI_0292 4.55e-105 304.0 COG0776@1|root,COG0776@2|Bacteria,4NUQD@976|Bacteroidetes,2FT95@200643|Bacteroidia,230KU@171551|Porphyromonadaceae 976|Bacteroidetes L Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - Bac_DNA_binding,HU-DNA_bdg LIIFOLDO_00450 471870.BACINT_02323 1.73e-30 109.0 298PA@1|root,2ZW23@2|Bacteria,4P8MY@976|Bacteroidetes,2FUSW@200643|Bacteroidia,4ASEW@815|Bacteroidaceae 976|Bacteroidetes S Domain of unknown function (DUF4248) - - - - - - - - - - - - DUF4248 LIIFOLDO_00451 435591.BDI_0294 0.0 1166.0 COG0358@1|root,COG0358@2|Bacteria,4NETK@976|Bacteroidetes,2FPSF@200643|Bacteroidia 976|Bacteroidetes L COG NOG25561 non supervised orthologous group - - - - - - - - - - - - DUF3987,PriCT_2,VirE_N LIIFOLDO_00452 435591.BDI_0295 9e-146 410.0 COG5519@1|root,COG5519@2|Bacteria,4P2T6@976|Bacteroidetes,2FRWY@200643|Bacteroidia 976|Bacteroidetes L VirE N-terminal domain protein - - - - - - - - - - - - VirE_N LIIFOLDO_00453 435591.BDI_0296 2.12e-225 620.0 COG4974@1|root,COG4974@2|Bacteria,4NZW9@976|Bacteroidetes,2FSE0@200643|Bacteroidia 976|Bacteroidetes L Phage integrase, N-terminal SAM-like domain - - - - - - - - - - - - Phage_int_SAM_5,Phage_integrase LIIFOLDO_00454 435591.BDI_0297 6.84e-159 454.0 COG0250@1|root,COG0250@2|Bacteria,4NJD3@976|Bacteroidetes,2FMZ7@200643|Bacteroidia 976|Bacteroidetes K Participates in transcription elongation, termination and antitermination - - - - - - - - - - - - - LIIFOLDO_00455 435591.BDI_0298 3.21e-92 269.0 2ESVK@1|root,33KDZ@2|Bacteria,4NZHI@976|Bacteroidetes,2FV4U@200643|Bacteroidia,230TB@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00458 435591.BDI_1355 1.45e-150 423.0 COG2148@1|root,COG2148@2|Bacteria,4NFIA@976|Bacteroidetes,2FMUQ@200643|Bacteroidia,22XDG@171551|Porphyromonadaceae 976|Bacteroidetes M sugar transferase - - - - - - - - - - - - Bac_transf LIIFOLDO_00459 411476.BACOVA_04986 3.52e-11 59.3 2BTBT@1|root,32NHJ@2|Bacteria,4P9JK@976|Bacteroidetes,2FUWV@200643|Bacteroidia,4AU8W@815|Bacteroidaceae 976|Bacteroidetes S Protein of unknown function (DUF3791) - - - - - - - - - - - - DUF3791 LIIFOLDO_00460 457424.BFAG_00888 2.68e-61 204.0 COG0656@1|root,COG0656@2|Bacteria,4NFTA@976|Bacteroidetes,2FMAF@200643|Bacteroidia,4AMPB@815|Bacteroidaceae 976|Bacteroidetes S aldo keto reductase family ytbE - - - - - - - - - - - Aldo_ket_red LIIFOLDO_00461 936572.HMPREF1148_1324 2.04e-24 108.0 28KV6@1|root,332FT@2|Bacteria,1UMXN@1239|Firmicutes 1239|Firmicutes - - - - - - - - - - - - - - - LIIFOLDO_00462 457424.BFAG_00877 1.06e-281 785.0 COG3882@1|root,COG3882@2|Bacteria,4NGY0@976|Bacteroidetes,2FMRH@200643|Bacteroidia,4AMCK@815|Bacteroidaceae 976|Bacteroidetes Q FkbH domain protein - - - - - - - - - - - - HAD_2 LIIFOLDO_00463 457424.BFAG_00878 6.57e-31 112.0 COG2030@1|root,COG2030@2|Bacteria 2|Bacteria I dehydratase - - 4.2.1.55 ko:K17865 ko00630,ko00650,ko01120,ko01200,map00630,map00650,map01120,map01200 M00373 R03027 RC00831 ko00000,ko00001,ko00002,ko01000 - - - MaoC_dehydratas LIIFOLDO_00464 457424.BFAG_00879 2.89e-93 280.0 COG1028@1|root,COG1028@2|Bacteria,4P4M5@976|Bacteroidetes 976|Bacteroidetes IQ Enoyl-(Acyl carrier protein) reductase - - - - - - - - - - - - adh_short LIIFOLDO_00465 457424.BFAG_00880 5.76e-27 100.0 COG0236@1|root,COG0236@2|Bacteria,4NVZ0@976|Bacteroidetes,2G3CD@200643|Bacteroidia 976|Bacteroidetes IQ Phosphopantetheine attachment site - - - ko:K02078 - - - - ko00000,ko00001 - - - PP-binding LIIFOLDO_00466 1123248.KB893314_gene3351 3.37e-06 53.9 COG0110@1|root,COG0110@2|Bacteria,4NT38@976|Bacteroidetes,1IUK6@117747|Sphingobacteriia 976|Bacteroidetes S maltose O-acetyltransferase activity - - - - - - - - - - - - Hexapep LIIFOLDO_00467 762968.HMPREF9441_01649 1.36e-99 315.0 COG0110@1|root,COG1035@1|root,COG1143@1|root,COG0110@2|Bacteria,COG1035@2|Bacteria,COG1143@2|Bacteria,4NG86@976|Bacteroidetes,2FMH7@200643|Bacteroidia 976|Bacteroidetes C 4Fe-4S binding domain protein - - - - - - - - - - - - Fer4,Fer4_7,FrhB_FdhB_C,FrhB_FdhB_N,Hexapep LIIFOLDO_00468 762968.HMPREF9441_01648 1.14e-57 201.0 COG2244@1|root,COG2244@2|Bacteria,4NEGZ@976|Bacteroidetes,2FNUG@200643|Bacteroidia 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - MatE LIIFOLDO_00469 59374.Fisuc_2675 4.72e-91 283.0 COG2327@1|root,COG2327@2|Bacteria 2|Bacteria S slime layer polysaccharide biosynthetic process - - 2.2.1.9 ko:K02551 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R08165 RC02186 ko00000,ko00001,ko00002,ko01000 - - - PS_pyruv_trans LIIFOLDO_00470 1408322.JHYK01000009_gene2322 1.04e-50 172.0 COG3394@1|root,COG3394@2|Bacteria,1W6Y9@1239|Firmicutes,24KAA@186801|Clostridia,27KUU@186928|unclassified Lachnospiraceae 186801|Clostridia G YdjC-like protein - - - - - - - - - - - - YdjC LIIFOLDO_00473 272559.BF9343_3585 6.58e-84 259.0 COG0463@1|root,COG0463@2|Bacteria,4P2FD@976|Bacteroidetes,2FTRC@200643|Bacteroidia 976|Bacteroidetes M Glycosyltransferase like family 2 - - - - - - - - - - - - Glycos_transf_2 LIIFOLDO_00474 1121098.HMPREF1534_00764 1.76e-110 325.0 COG1215@1|root,COG1215@2|Bacteria,4PM37@976|Bacteroidetes,2FNUQ@200643|Bacteroidia,4AKMH@815|Bacteroidaceae 976|Bacteroidetes M Glycosyltransferase, group 2 family protein wbyL - - - - - - - - - - - Glycos_transf_2 LIIFOLDO_00475 880074.BARVI_00450 7.33e-248 682.0 COG1089@1|root,COG1089@2|Bacteria,4NEB6@976|Bacteroidetes,2FMUP@200643|Bacteroidia,22X5T@171551|Porphyromonadaceae 976|Bacteroidetes M Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose gmd - 4.2.1.47 ko:K01711 ko00051,ko00520,ko01100,map00051,map00520,map01100 - R00888 RC00402 ko00000,ko00001,ko01000 - - - GDP_Man_Dehyd LIIFOLDO_00476 435591.BDI_2202 6.93e-210 582.0 COG0451@1|root,COG0451@2|Bacteria,4NDV4@976|Bacteroidetes,2FNA5@200643|Bacteroidia,22W0D@171551|Porphyromonadaceae 976|Bacteroidetes GM Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction fcl - 1.1.1.271 ko:K02377 ko00051,ko00520,ko01100,map00051,map00520,map01100 - R05692 RC01014 ko00000,ko00001,ko01000 - - - Epimerase LIIFOLDO_00477 999419.HMPREF1077_03728 5.47e-198 552.0 COG2826@1|root,COG2826@2|Bacteria,4NFRA@976|Bacteroidetes,2FRII@200643|Bacteroidia,22ZTG@171551|Porphyromonadaceae 976|Bacteroidetes L Helix-turn-helix domain - - - - - - - - - - - - HTH_32,HTH_38,rve LIIFOLDO_00478 435591.BDI_0308 9.59e-67 202.0 COG0261@1|root,COG0261@2|Bacteria,4NQKP@976|Bacteroidetes,2G2BD@200643|Bacteroidia,231IE@171551|Porphyromonadaceae 976|Bacteroidetes J This protein binds to 23S rRNA in the presence of protein L20 rplU - - ko:K02888 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L21p LIIFOLDO_00479 435591.BDI_0309 3.83e-56 174.0 COG0211@1|root,COG0211@2|Bacteria,4NS7T@976|Bacteroidetes,2FTXU@200643|Bacteroidia,22YG4@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the bacterial ribosomal protein bL27 family rpmA - - ko:K02899 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L27 LIIFOLDO_00480 435591.BDI_0310 0.0 952.0 COG0034@1|root,COG0034@2|Bacteria,4NFSM@976|Bacteroidetes,2FMIC@200643|Bacteroidia,22WKI@171551|Porphyromonadaceae 976|Bacteroidetes F Glutamine phosphoribosylpyrophosphate amidotransferase purF - 2.4.2.14 ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048 R01072 RC00010,RC02724,RC02752 ko00000,ko00001,ko00002,ko01000,ko01002 - - - GATase_6,GATase_7,Pribosyltran LIIFOLDO_00481 435591.BDI_0311 9.81e-300 816.0 COG2195@1|root,COG2195@2|Bacteria,4NE7N@976|Bacteroidetes,2FMBF@200643|Bacteroidia,22WC7@171551|Porphyromonadaceae 976|Bacteroidetes E Cleaves the N-terminal amino acid of tripeptides pepT - 3.4.11.4 ko:K01258 - - - - ko00000,ko01000,ko01002 - - - M20_dimer,Peptidase_M20 LIIFOLDO_00482 435591.BDI_0312 2.09e-269 736.0 COG0404@1|root,COG0404@2|Bacteria,4NF7S@976|Bacteroidetes,2FPDM@200643|Bacteroidia,22X2U@171551|Porphyromonadaceae 976|Bacteroidetes E The glycine cleavage system catalyzes the degradation of glycine gcvT - 2.1.2.10 ko:K00605 ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200 M00532 R01221,R02300,R04125 RC00022,RC00069,RC00183,RC02834 ko00000,ko00001,ko00002,ko01000 - - - GCV_T,GCV_T_C LIIFOLDO_00483 435591.BDI_0313 4.18e-127 362.0 2924H@1|root,33VNU@2|Bacteria,4P3NC@976|Bacteroidetes,2FQG9@200643|Bacteroidia,230JC@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4251) - - - - - - - - - - - - DUF4251 LIIFOLDO_00484 435591.BDI_0314 2.96e-241 663.0 COG0673@1|root,COG0673@2|Bacteria,4NE07@976|Bacteroidetes,2FNUN@200643|Bacteroidia,22X96@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase NAD-binding domain protein - - - ko:K22230 ko00562,ko01120,map00562,map01120 - R09954 RC00182 ko00000,ko00001,ko01000 - - - GFO_IDH_MocA LIIFOLDO_00485 435591.BDI_0315 2.13e-277 759.0 28HAZ@1|root,2Z7N5@2|Bacteria,4NH23@976|Bacteroidetes,2FRP2@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - LIIFOLDO_00486 435591.BDI_0316 5.39e-136 384.0 2CGGN@1|root,2ZX47@2|Bacteria,4NNTI@976|Bacteroidetes,2FR0Q@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - LIIFOLDO_00487 435591.BDI_0317 0.0 2171.0 COG1196@1|root,COG1196@2|Bacteria,4NJ5T@976|Bacteroidetes,2FNV3@200643|Bacteroidia 976|Bacteroidetes D Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - DUF3584 LIIFOLDO_00488 435591.BDI_0318 0.0 1261.0 COG0171@1|root,COG0388@1|root,COG0171@2|Bacteria,COG0388@2|Bacteria,4NHXQ@976|Bacteroidetes,2FNAT@200643|Bacteroidia,22VUJ@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source nadE - 6.3.5.1 ko:K01950 ko00760,ko01100,map00760,map01100 M00115 R00257 RC00010,RC00100 ko00000,ko00001,ko00002,ko01000 - - - CN_hydrolase,NAD_synthase LIIFOLDO_00489 1235803.C825_00477 3.77e-11 62.0 COG3668@1|root,COG3668@2|Bacteria,4NYCZ@976|Bacteroidetes,2FVU0@200643|Bacteroidia 976|Bacteroidetes S ParE toxin of type II toxin-antitoxin system, parDE - - - - - - - - - - - - ParE_toxin LIIFOLDO_00491 435591.BDI_0320 0.0 1437.0 COG3968@1|root,COG3968@2|Bacteria,4NG2B@976|Bacteroidetes,2FMC9@200643|Bacteroidia,22WEW@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the glutamine synthetase family glnA - 6.3.1.2 ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 - R00253 RC00010,RC02798 ko00000,ko00001,ko01000,ko04147 - - - GSIII_N,Gln-synt_C LIIFOLDO_00492 435591.BDI_0321 8.85e-309 840.0 COG0436@1|root,COG0436@2|Bacteria,4NFWS@976|Bacteroidetes,2FMMU@200643|Bacteroidia,22WC2@171551|Porphyromonadaceae 976|Bacteroidetes E Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate dapL - 2.6.1.83 ko:K10206 ko00300,ko01100,ko01110,ko01130,ko01230,map00300,map01100,map01110,map01130,map01230 M00527 R07613 RC00006,RC01847 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_1_2 LIIFOLDO_00493 435591.BDI_0322 1.51e-193 536.0 COG0253@1|root,COG0253@2|Bacteria,4NF26@976|Bacteroidetes,2FNI4@200643|Bacteroidia,22WSU@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan dapF - 5.1.1.7 ko:K01778 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00527 R02735 RC00302 ko00000,ko00001,ko00002,ko01000 - - - DAP_epimerase LIIFOLDO_00494 435591.BDI_3217 6.92e-153 436.0 COG3391@1|root,COG3391@2|Bacteria,4NE7W@976|Bacteroidetes,2FRHE@200643|Bacteroidia 976|Bacteroidetes S 6-bladed beta-propeller - - - - - - - - - - - - DUF5128 LIIFOLDO_00495 435591.BDI_3218 0.0 1444.0 COG0729@1|root,COG1752@1|root,COG0729@2|Bacteria,COG1752@2|Bacteria,4NDXY@976|Bacteroidetes,2FNEV@200643|Bacteroidia,22WBN@171551|Porphyromonadaceae 976|Bacteroidetes M esterase of the alpha-beta hydrolase superfamily - - - ko:K07001 - - - - ko00000 - - - POTRA,Patatin LIIFOLDO_00496 435591.BDI_3219 4.18e-168 468.0 COG5587@1|root,COG5587@2|Bacteria,4NNS3@976|Bacteroidetes,2FPZZ@200643|Bacteroidia,22XWU@171551|Porphyromonadaceae 976|Bacteroidetes S Conserved hypothetical protein (DUF2461) - - - - - - - - - - - - DUF2461 LIIFOLDO_00497 435591.BDI_3220 7.2e-283 772.0 COG4285@1|root,COG4285@2|Bacteria,4P1B7@976|Bacteroidetes,2FWHI@200643|Bacteroidia 976|Bacteroidetes S Biotin-protein ligase, N terminal - - - - - - - - - - - - BPL_N,DJ-1_PfpI LIIFOLDO_00498 435591.BDI_3221 2.69e-298 812.0 2DRHF@1|root,33BRV@2|Bacteria,4PMVH@976|Bacteroidetes 976|Bacteroidetes S Domain of unknown function (DUF4842) - - - - - - - - - - - - DUF4842 LIIFOLDO_00499 435591.BDI_3222 5.97e-96 279.0 2C25A@1|root,33QA9@2|Bacteria,4P120@976|Bacteroidetes,2FVCY@200643|Bacteroidia,2311F@171551|Porphyromonadaceae 976|Bacteroidetes S Family of unknown function (DUF3836) - - - - - - - - - - - - DUF3836 LIIFOLDO_00500 435591.BDI_3266 0.0 905.0 COG1350@1|root,COG1350@2|Bacteria,4PKSY@976|Bacteroidetes,2FMFD@200643|Bacteroidia,22WD1@171551|Porphyromonadaceae 976|Bacteroidetes E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine trpB - 4.2.1.20 ko:K06001 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 M00023 R00674,R02340,R02722 RC00209,RC00210,RC00700,RC00701,RC02868 ko00000,ko00001,ko00002,ko01000 - - - PALP LIIFOLDO_00501 435591.BDI_3267 5.98e-307 835.0 292UM@1|root,2ZQC9@2|Bacteria,4NTGF@976|Bacteroidetes,2FMY7@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00502 435591.BDI_3268 2.09e-311 846.0 292UM@1|root,2ZQC9@2|Bacteria,4NTGF@976|Bacteroidetes,2FMY7@200643|Bacteroidia,22WZB@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00503 435591.BDI_3269 3.89e-241 662.0 COG0136@1|root,COG0136@2|Bacteria,4NE4V@976|Bacteroidetes,2FMHI@200643|Bacteroidia,22VZA@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate asd - 1.2.1.11 ko:K00133 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00017,M00018,M00033,M00525,M00526,M00527 R02291 RC00684 ko00000,ko00001,ko00002,ko01000 - - - Semialdhyde_dh,Semialdhyde_dhC LIIFOLDO_00504 435591.BDI_3270 0.0 1457.0 COG4288@1|root,COG4288@2|Bacteria,4NHM6@976|Bacteroidetes,2FQBP@200643|Bacteroidia,22Y8Y@171551|Porphyromonadaceae 976|Bacteroidetes S Lamin Tail Domain - - - - - - - - - - - - Big_5,CHU_C,LTD LIIFOLDO_00506 435591.BDI_3271 1.54e-272 745.0 COG2931@1|root,COG2931@2|Bacteria,4NNN8@976|Bacteroidetes,2FNV2@200643|Bacteroidia,22Y2T@171551|Porphyromonadaceae 976|Bacteroidetes Q Clostripain family - - - - - - - - - - - - Peptidase_C11 LIIFOLDO_00507 435591.BDI_3272 1.49e-136 385.0 COG2885@1|root,COG2885@2|Bacteria,4NN9C@976|Bacteroidetes,2FPCM@200643|Bacteroidia 976|Bacteroidetes M non supervised orthologous group - - - - - - - - - - - - DUF3575 LIIFOLDO_00508 435591.BDI_3273 1.82e-111 321.0 COG2885@1|root,COG2885@2|Bacteria,4PGV3@976|Bacteroidetes,2FZJK@200643|Bacteroidia 976|Bacteroidetes M Domain of unknown function, B. Theta Gene description (DUF3868) - - - - - - - - - - - - DUF3868 LIIFOLDO_00509 435591.BDI_3274 3.57e-109 314.0 COG1106@1|root,COG1106@2|Bacteria,4PMYC@976|Bacteroidetes,2FQF4@200643|Bacteroidia,22ZJU@171551|Porphyromonadaceae 976|Bacteroidetes S AAA ATPase domain - - - - - - - - - - - - AAA_21 LIIFOLDO_00510 435591.BDI_3275 1.02e-162 455.0 COG0693@1|root,COG0693@2|Bacteria,4NGII@976|Bacteroidetes,2FRDK@200643|Bacteroidia 976|Bacteroidetes S DJ-1/PfpI family - - - - - - - - - - - - DJ-1_PfpI LIIFOLDO_00511 435591.BDI_3276 2.5e-174 486.0 COG0778@1|root,COG0778@2|Bacteria,4NEA5@976|Bacteroidetes,2FNK5@200643|Bacteroidia,22XGH@171551|Porphyromonadaceae 976|Bacteroidetes C nitroreductase yfkO - - - - - - - - - - - Nitroreductase LIIFOLDO_00514 435591.BDI_3278 1.74e-45 164.0 2DWXU@1|root,342F4@2|Bacteria,4P4AY@976|Bacteroidetes,2FSRI@200643|Bacteroidia 976|Bacteroidetes S COG NOG31846 non supervised orthologous group - - - - - - - - - - - - Gly_rich,Mfa_like_1 LIIFOLDO_00515 435591.BDI_3279 9.13e-239 657.0 2FJ1E@1|root,34AS1@2|Bacteria,4NW1S@976|Bacteroidetes,2FRI7@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function (DUF5119) - - - - - - - - - - - - DUF5119 LIIFOLDO_00517 435591.BDI_3281 1.87e-215 593.0 COG2207@1|root,COG2207@2|Bacteria,4P2DJ@976|Bacteroidetes,2FNWY@200643|Bacteroidia 976|Bacteroidetes K transcriptional regulator (AraC family) - - - - - - - - - - - - HTH_18 LIIFOLDO_00518 435591.BDI_3282 0.0 1078.0 COG1649@1|root,COG1649@2|Bacteria,4NFKQ@976|Bacteroidetes,2FMPU@200643|Bacteroidia,22W1J@171551|Porphyromonadaceae 976|Bacteroidetes S Glycosyl hydrolase-like 10 - - - - - - - - - - - - GHL10 LIIFOLDO_00519 435591.BDI_3283 0.0 1849.0 COG0178@1|root,COG0178@2|Bacteria,4NEHM@976|Bacteroidetes,2FNFZ@200643|Bacteroidia,22X2V@171551|Porphyromonadaceae 976|Bacteroidetes L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate uvrA1 - - ko:K03701 ko03420,map03420 - - - ko00000,ko00001,ko03400 - - - AAA_21,ABC_tran LIIFOLDO_00520 435591.BDI_3284 0.0 1103.0 COG0446@1|root,COG0446@2|Bacteria,4NE3A@976|Bacteroidetes,2FKYC@200643|Bacteroidia 976|Bacteroidetes S SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_00521 435591.BDI_3285 0.0 2127.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_00522 435591.BDI_3286 6.3e-45 145.0 2EJQT@1|root,33DFM@2|Bacteria,4NY43@976|Bacteroidetes,2FVKG@200643|Bacteroidia,22Z2Q@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00523 999419.HMPREF1077_01950 1.28e-126 392.0 COG5337@1|root,COG5337@2|Bacteria,4NEH2@976|Bacteroidetes 976|Bacteroidetes M sodium ion export across plasma membrane - - - - - - - - - - - - CHB_HEX_C_1,CotH,Fn3_assoc,LTD LIIFOLDO_00524 435591.BDI_3288 6.17e-281 769.0 COG2262@1|root,COG2262@2|Bacteria,4NF0P@976|Bacteroidetes,2FM9T@200643|Bacteroidia,22W7M@171551|Porphyromonadaceae 976|Bacteroidetes S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis hflX - - ko:K03665 - - - - ko00000,ko03009 - - - GTP-bdg_M,GTP-bdg_N,MMR_HSR1 LIIFOLDO_00525 435591.BDI_3289 0.0 1317.0 COG0448@1|root,COG0448@2|Bacteria,4PKFG@976|Bacteroidetes,2G3FA@200643|Bacteroidia,22VWS@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of unknown function (DUF4954) - - - - - - - - - - - - DUF4954 LIIFOLDO_00526 435591.BDI_3290 8.89e-214 590.0 COG0662@1|root,COG2207@1|root,COG0662@2|Bacteria,COG2207@2|Bacteria,4NE6T@976|Bacteroidetes,2G2TC@200643|Bacteroidia 976|Bacteroidetes K transcriptional regulator (AraC family) - - - - - - - - - - - - AraC_binding,Cupin_2,HTH_18 LIIFOLDO_00527 435591.BDI_3291 2.39e-137 387.0 COG2140@1|root,COG2140@2|Bacteria,4P00D@976|Bacteroidetes,2FS49@200643|Bacteroidia,22ZQ5@171551|Porphyromonadaceae 976|Bacteroidetes G Glucose-6-phosphate isomerase (GPI) - - 5.3.1.9 ko:K06859 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 M00001,M00004,M00114 R02739,R02740,R03321 RC00376,RC00563 ko00000,ko00001,ko00002,ko01000 - - - GPI LIIFOLDO_00528 435591.BDI_3292 3.18e-236 649.0 COG1940@1|root,COG1940@2|Bacteria,4NKSF@976|Bacteroidetes,2FQ7G@200643|Bacteroidia 976|Bacteroidetes GK ROK family - - 2.7.1.2 ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 M00001,M00549 R00299,R01600,R01786 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - ROK LIIFOLDO_00529 435591.BDI_3293 8.15e-199 549.0 COG2140@1|root,COG2140@2|Bacteria,4P0BQ@976|Bacteroidetes,2FRCV@200643|Bacteroidia 976|Bacteroidetes G Glucose-6-phosphate isomerase (GPI) - - 5.3.1.9 ko:K06859 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 M00001,M00004,M00114 R02739,R02740,R03321 RC00376,RC00563 ko00000,ko00001,ko00002,ko01000 - - - GPI LIIFOLDO_00530 435591.BDI_3294 0.0 929.0 COG0477@1|root,COG2814@2|Bacteria,4NE09@976|Bacteroidetes,2G07R@200643|Bacteroidia 976|Bacteroidetes P Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family araE - - ko:K02100 - - - - ko00000,ko02000 2.A.1.1.2 - - Sugar_tr LIIFOLDO_00531 1158294.JOMI01000009_gene1277 2.2e-221 619.0 2E5U1@1|root,330IC@2|Bacteria 2|Bacteria S Sugar-binding cellulase-like - - - - - - - - - - - - Cellulase-like LIIFOLDO_00532 435591.BDI_3296 0.0 1559.0 COG3250@1|root,COG3250@2|Bacteria,4NHRH@976|Bacteroidetes 976|Bacteroidetes G Belongs to the glycosyl hydrolase 2 family lacZ_17 - 3.2.1.23 ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 - R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 - - - DUF4982,F5_F8_type_C,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N LIIFOLDO_00533 435591.BDI_3297 0.0 2127.0 COG1629@1|root,COG1629@2|Bacteria,COG4771@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia,22W07@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent receptor plug domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec LIIFOLDO_00534 435591.BDI_3298 0.0 1031.0 COG0446@1|root,COG0446@2|Bacteria,4NDYU@976|Bacteroidetes,2FM3Z@200643|Bacteroidia,22WYC@171551|Porphyromonadaceae 976|Bacteroidetes S SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_00535 435591.BDI_3299 2.56e-92 276.0 COG5464@1|root,COG5464@2|Bacteria,4NGSI@976|Bacteroidetes,2FN70@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - PDDEXK_2 LIIFOLDO_00536 435591.BDI_3299 2.72e-94 281.0 COG5464@1|root,COG5464@2|Bacteria,4NGSI@976|Bacteroidetes,2FN70@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - PDDEXK_2 LIIFOLDO_00537 435591.BDI_3300 3.2e-211 584.0 COG4974@1|root,COG4974@2|Bacteria,4NE0E@976|Bacteroidetes,2FP3B@200643|Bacteroidia,22WQE@171551|Porphyromonadaceae 976|Bacteroidetes D Belongs to the 'phage' integrase family. XerC subfamily xerC - - ko:K04763 - - - - ko00000,ko03036 - - - Phage_int_SAM_1,Phage_integrase LIIFOLDO_00538 435591.BDI_3301 1.51e-95 279.0 COG0757@1|root,COG0757@2|Bacteria,4NNHU@976|Bacteroidetes,2FR57@200643|Bacteroidia,22XWF@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes a trans-dehydration via an enolate intermediate aroQ - 4.2.1.10 ko:K03786 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R03084 RC00848 ko00000,ko00001,ko00002,ko01000 - - - DHquinase_II LIIFOLDO_00539 435591.BDI_3302 0.0 955.0 COG0469@1|root,COG0469@2|Bacteria,4NEEU@976|Bacteroidetes,2FNU3@200643|Bacteroidia,22WAP@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the pyruvate kinase family pyk - 2.7.1.40 ko:K00873 ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 M00001,M00002,M00049,M00050 R00200,R00430,R01138,R01858,R02320 RC00002,RC00015 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 - - - PK,PK_C LIIFOLDO_00540 435591.BDI_3303 6.68e-150 421.0 COG4122@1|root,COG4122@2|Bacteria,4NH42@976|Bacteroidetes,2FM5S@200643|Bacteroidia,22WC1@171551|Porphyromonadaceae 976|Bacteroidetes S O-Methyltransferase - - 2.1.1.104 ko:K00588 ko00360,ko00940,ko00941,ko00945,ko01100,ko01110,map00360,map00940,map00941,map00945,map01100,map01110 M00039,M00350 R01942,R06578 RC00003,RC00392 ko00000,ko00001,ko00002,ko01000 - - - Methyltransf_3 LIIFOLDO_00541 435591.BDI_3304 2.67e-69 209.0 COG0858@1|root,COG0858@2|Bacteria,4NSQJ@976|Bacteroidetes,2FT27@200643|Bacteroidia,22YGP@171551|Porphyromonadaceae 976|Bacteroidetes J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA rbfA - - ko:K02834 - - - - ko00000,ko03009 - - - RBFA LIIFOLDO_00542 435591.BDI_3305 2.43e-263 724.0 COG4591@1|root,COG4591@2|Bacteria,4NG04@976|Bacteroidetes,2FNHB@200643|Bacteroidia,22X1B@171551|Porphyromonadaceae 976|Bacteroidetes M Efflux ABC transporter, permease protein lolE - - ko:K09808,ko:K09815 ko02010,map02010 M00242,M00255 - - ko00000,ko00001,ko00002,ko02000 3.A.1.125,3.A.1.15.3,3.A.1.15.5 - - FtsX,MacB_PCD LIIFOLDO_00543 435591.BDI_3306 1.38e-253 696.0 COG0836@1|root,COG0836@2|Bacteria,4NE1Y@976|Bacteroidetes,2FNHF@200643|Bacteroidia,22X4P@171551|Porphyromonadaceae 976|Bacteroidetes M mannose-1-phosphate guanylyltransferase manC - 2.7.7.13 ko:K00971 ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110 M00114,M00361,M00362 R00885 RC00002 ko00000,ko00001,ko00002,ko01000 - - - NTP_transferase LIIFOLDO_00545 435591.BDI_3308 3.53e-90 271.0 COG1670@1|root,COG1670@2|Bacteria,4NR3B@976|Bacteroidetes,2FVYG@200643|Bacteroidia,22ZXT@171551|Porphyromonadaceae 976|Bacteroidetes J Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_3 LIIFOLDO_00546 435591.BDI_3309 3.45e-37 132.0 COG0500@1|root,COG2226@2|Bacteria,4NYQF@976|Bacteroidetes,2FMVK@200643|Bacteroidia,22XSM@171551|Porphyromonadaceae 976|Bacteroidetes Q Nodulation protein S (NodS) cypM_2 - - - - - - - - - - - Methyltransf_25 LIIFOLDO_00547 435591.BDI_3310 1.93e-99 293.0 COG0454@1|root,COG0456@2|Bacteria,4NR84@976|Bacteroidetes,2FTRP@200643|Bacteroidia,22ZYA@171551|Porphyromonadaceae 976|Bacteroidetes K Protein of unknown function (DUF3795) yafP - - ko:K03830 - - - - ko00000,ko01000 - - - Acetyltransf_10 LIIFOLDO_00548 435591.BDI_0056 0.0 986.0 COG1649@1|root,COG1649@2|Bacteria,4NJ45@976|Bacteroidetes,2FMC1@200643|Bacteroidia,22WYA@171551|Porphyromonadaceae 976|Bacteroidetes S Pfam:DUF303 - - 3.1.1.53 ko:K05970 - - - - ko00000,ko01000 - - - SASA LIIFOLDO_00549 435591.BDI_0057 4.9e-310 842.0 COG2942@1|root,COG2942@2|Bacteria,4NEH7@976|Bacteroidetes,2FM9N@200643|Bacteroidia,22X27@171551|Porphyromonadaceae 976|Bacteroidetes G Catalyzes the reversible epimerization of cellobiose to 4-O-beta-D-glucopyranosyl-D-mannose (Glc-Man) bfce - 5.1.3.11 ko:K16213 - - R01445,R10810 RC00289 ko00000,ko01000 - - - GlcNAc_2-epim LIIFOLDO_00550 435591.BDI_0058 0.0 905.0 COG2211@1|root,COG2211@2|Bacteria,4NE3B@976|Bacteroidetes,2FPMF@200643|Bacteroidia,22VUF@171551|Porphyromonadaceae 976|Bacteroidetes G MFS/sugar transport protein yicJ_1 - - ko:K03292 - - - - ko00000 2.A.2 - - MFS_2 LIIFOLDO_00551 435591.BDI_0059 6.3e-297 808.0 COG2152@1|root,COG2152@2|Bacteria,4NGA2@976|Bacteroidetes,2FMJR@200643|Bacteroidia,22WMJ@171551|Porphyromonadaceae 976|Bacteroidetes G Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose - - 2.4.1.281 ko:K16212 - - R09943 RC00049 ko00000,ko01000 - - - Glyco_hydro_130 LIIFOLDO_00552 435591.BDI_0060 1.02e-284 775.0 COG4124@1|root,COG4124@2|Bacteria,4NEZG@976|Bacteroidetes,2FPAD@200643|Bacteroidia,22XVD@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the glycosyl hydrolase 26 family - - 3.2.1.78 ko:K01218,ko:K19355 ko00051,ko02024,map00051,map02024 - R01332 RC00467 ko00000,ko00001,ko01000 - GH26 - Glyco_hydro_26 LIIFOLDO_00554 435591.BDI_0062 0.0 989.0 COG0823@1|root,COG0823@2|Bacteria,4NGH4@976|Bacteroidetes,2FN8G@200643|Bacteroidia,22Z72@171551|Porphyromonadaceae 976|Bacteroidetes U WD40-like Beta Propeller Repeat - - - - - - - - - - - - PD40 LIIFOLDO_00555 435591.BDI_0063 0.0 1200.0 28KYZ@1|root,2ZAEB@2|Bacteria,4NHBZ@976|Bacteroidetes,2FP4X@200643|Bacteroidia,22ZDC@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - - LIIFOLDO_00556 435591.BDI_0064 0.0 1004.0 COG0823@1|root,COG0823@2|Bacteria,4NGH4@976|Bacteroidetes,2FN8G@200643|Bacteroidia,22Z6E@171551|Porphyromonadaceae 976|Bacteroidetes U WD40-like Beta Propeller Repeat - - - - - - - - - - - - PD40 LIIFOLDO_00557 435591.BDI_0065 0.0 1031.0 28KYZ@1|root,2Z8XP@2|Bacteria,4NJNC@976|Bacteroidetes,2FQ6U@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00558 435591.BDI_0066 3.89e-139 393.0 COG0526@1|root,COG0526@2|Bacteria 2|Bacteria CO cell redox homeostasis soxS - - ko:K03671 ko04621,ko05418,map04621,map05418 - - - ko00000,ko00001,ko03110 - - - DUF4369,Thioredoxin LIIFOLDO_00559 435591.BDI_0067 6.56e-57 186.0 COG4992@1|root,COG4992@2|Bacteria,4NE0Z@976|Bacteroidetes,2FNR5@200643|Bacteroidia,22VXR@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family argD - 2.6.1.11,2.6.1.17 ko:K00821 ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00028,M00845 R02283,R04475 RC00006,RC00062 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_3 LIIFOLDO_00560 435591.BDI_0067 5.59e-205 571.0 COG4992@1|root,COG4992@2|Bacteria,4NE0Z@976|Bacteroidetes,2FNR5@200643|Bacteroidia,22VXR@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family argD - 2.6.1.11,2.6.1.17 ko:K00821 ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00028,M00845 R02283,R04475 RC00006,RC00062 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_3 LIIFOLDO_00561 435591.BDI_0068 4.19e-238 654.0 COG0002@1|root,COG0002@2|Bacteria,4NEQR@976|Bacteroidetes,2FMWZ@200643|Bacteroidia,22WTC@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde argC - 1.2.1.38 ko:K00145 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028,M00845 R03443 RC00684 ko00000,ko00001,ko00002,ko01000 - - - Semialdhyde_dh,Semialdhyde_dhC LIIFOLDO_00562 435591.BDI_0069 6.52e-290 791.0 COG0137@1|root,COG0137@2|Bacteria,4NE3R@976|Bacteroidetes,2FMRA@200643|Bacteroidia,22X17@171551|Porphyromonadaceae 976|Bacteroidetes E argininosuccinate synthase argG - 6.3.4.5 ko:K01940 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418 M00029,M00844,M00845 R01954 RC00380,RC00629 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Arginosuc_synth LIIFOLDO_00563 435591.BDI_0070 1.31e-140 397.0 COG1246@1|root,COG1246@2|Bacteria,4NGXY@976|Bacteroidetes,2FN6P@200643|Bacteroidia,22XAD@171551|Porphyromonadaceae 976|Bacteroidetes E Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_1 LIIFOLDO_00564 435591.BDI_0071 1.6e-98 286.0 COG1438@1|root,COG1438@2|Bacteria,4NSSS@976|Bacteroidetes,2FR3Q@200643|Bacteroidia,22YDN@171551|Porphyromonadaceae 976|Bacteroidetes K Regulates arginine biosynthesis genes argR - - ko:K03402 - - - - ko00000,ko03000 - - - Arg_repressor,Arg_repressor_C LIIFOLDO_00565 435591.BDI_0072 4.99e-180 502.0 COG0501@1|root,COG0501@2|Bacteria,4NE0J@976|Bacteroidetes,2FQJ1@200643|Bacteroidia,22VWE@171551|Porphyromonadaceae 976|Bacteroidetes O Peptidase, M48 family - - - - - - - - - - - - Peptidase_M48 LIIFOLDO_00566 435591.BDI_0073 0.0 1187.0 COG0249@1|root,COG0249@2|Bacteria,4NE6X@976|Bacteroidetes,2FM62@200643|Bacteroidia,22W8S@171551|Porphyromonadaceae 976|Bacteroidetes L ATPase domain of DNA mismatch repair MUTS family mutS_2 - - - - - - - - - - - MutS_III,MutS_V LIIFOLDO_00567 435591.BDI_0074 1.26e-205 568.0 COG2829@1|root,COG2829@2|Bacteria,4NIYQ@976|Bacteroidetes,2FR73@200643|Bacteroidia,22WW2@171551|Porphyromonadaceae 976|Bacteroidetes M Phospholipase A1 pldA - 3.1.1.32,3.1.1.4 ko:K01058 ko00564,ko00565,ko00590,ko00591,ko00592,ko01100,ko01110,map00564,map00565,map00590,map00591,map00592,map01100,map01110 - R01315,R01316,R01317,R02053,R02054,R04034,R07064,R07379,R07387,R07859,R07860 RC00020,RC00037,RC00041,RC00094 ko00000,ko00001,ko01000 - - - PLA1 LIIFOLDO_00568 435591.BDI_0075 0.0 1013.0 COG4799@1|root,COG4799@2|Bacteria,4NEMJ@976|Bacteroidetes,2FM4G@200643|Bacteroidia,22WJA@171551|Porphyromonadaceae 976|Bacteroidetes I Carboxyl transferase domain - - 2.1.3.15,6.4.1.3 ko:K01966 ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200 M00373,M00741 R01859 RC00097,RC00609 ko00000,ko00001,ko00002,ko01000 - - - Carboxyl_trans LIIFOLDO_00569 435591.BDI_0076 0.0 996.0 COG0439@1|root,COG0439@2|Bacteria,4NFEQ@976|Bacteroidetes,2FMBN@200643|Bacteroidia,22WI1@171551|Porphyromonadaceae 976|Bacteroidetes I Biotin carboxylase C-terminal domain - - 6.3.4.14,6.4.1.2,6.4.1.3 ko:K01961,ko:K01965 ko00061,ko00280,ko00620,ko00630,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00373,M00376,M00741 R00742,R01859,R04385 RC00040,RC00097,RC00253,RC00367,RC00609 ko00000,ko00001,ko00002,ko01000 - - - Biotin_carb_C,Biotin_carb_N,CPSase_L_D2 LIIFOLDO_00570 435591.BDI_0077 1.89e-101 296.0 COG4770@1|root,COG4770@2|Bacteria,4NQ86@976|Bacteroidetes,2FQI2@200643|Bacteroidia 976|Bacteroidetes I Biotin carboxyl carrier protein - - 6.4.1.1 ko:K01960 ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230 M00173,M00620 R00344 RC00040,RC00367 ko00000,ko00001,ko00002,ko01000 - - - Biotin_lipoyl LIIFOLDO_00571 435591.BDI_0078 2.28e-315 862.0 COG1055@1|root,COG1055@2|Bacteria,4NGP4@976|Bacteroidetes,2FQ8M@200643|Bacteroidia,22XFH@171551|Porphyromonadaceae 976|Bacteroidetes P Citrate transporter nhaD - - - - - - - - - - - CitMHS LIIFOLDO_00572 435591.BDI_0079 3.72e-181 506.0 COG2971@1|root,COG2971@2|Bacteria,4NEV4@976|Bacteroidetes,2FNFM@200643|Bacteroidia,22WIC@171551|Porphyromonadaceae 976|Bacteroidetes G Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - BcrAD_BadFG LIIFOLDO_00573 435591.BDI_0080 1.01e-190 530.0 COG2103@1|root,COG2103@2|Bacteria,4NEPY@976|Bacteroidetes,2FNYH@200643|Bacteroidia,22W3R@171551|Porphyromonadaceae 976|Bacteroidetes G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate murQ - 4.2.1.126 ko:K07106 ko00520,ko01100,map00520,map01100 - R08555 RC00397,RC00746 ko00000,ko00001,ko01000 - - - SIS LIIFOLDO_00574 435591.BDI_0081 7.08e-145 409.0 COG1285@1|root,COG1285@2|Bacteria,4NM47@976|Bacteroidetes,2FP38@200643|Bacteroidia,22XUB@171551|Porphyromonadaceae 976|Bacteroidetes S MgtC family - - - ko:K07507 - - - - ko00000,ko02000 9.B.20 - - MgtC LIIFOLDO_00575 435591.BDI_0082 1.45e-145 410.0 28P7K@1|root,2ZC1X@2|Bacteria,4NMQB@976|Bacteroidetes,2FQ00@200643|Bacteroidia,22ZW4@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG25304 non supervised orthologous group - - - - - - - - - - - - - LIIFOLDO_00576 435591.BDI_0083 5.37e-137 387.0 COG3663@1|root,COG3663@2|Bacteria,4NP4A@976|Bacteroidetes,2FMNZ@200643|Bacteroidia,22XQQ@171551|Porphyromonadaceae 976|Bacteroidetes L DNA glycosylase mug - - - - - - - - - - - - LIIFOLDO_00578 435591.BDI_0085 5.09e-203 561.0 2A8EE@1|root,30XG7@2|Bacteria,4NPA9@976|Bacteroidetes,2G2CC@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00579 435591.BDI_0086 0.0 1211.0 COG0446@1|root,COG0446@2|Bacteria,4PMXQ@976|Bacteroidetes,2G0JT@200643|Bacteroidia,22WBC@171551|Porphyromonadaceae 976|Bacteroidetes S Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_00580 435591.BDI_0087 0.0 2190.0 COG1629@1|root,COG1629@2|Bacteria,COG4771@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia,2324H@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_00581 435591.BDI_0088 1.25e-208 577.0 COG2207@1|root,COG2207@2|Bacteria,4NEVG@976|Bacteroidetes,2FN82@200643|Bacteroidia,22WI8@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix, arabinose operon control protein - - - - - - - - - - - - AraC_binding,HTH_18 LIIFOLDO_00582 435591.BDI_0089 0.0 1513.0 COG3345@1|root,COG3345@2|Bacteria,4NHAT@976|Bacteroidetes,2FM30@200643|Bacteroidia,22WS0@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 36 C-terminal domain - - 3.2.1.22 ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 - R01101,R01103,R01104,R01194,R01329,R02926,R03634,R04019,R04470,R05549,R05961,R06091 RC00049,RC00059,RC00451 ko00000,ko00001,ko01000 - - - Glyco_hydro_36C,Glyco_hydro_36N,Melibiase LIIFOLDO_00583 435591.BDI_0090 0.0 1000.0 COG0516@1|root,COG0517@1|root,COG0516@2|Bacteria,COG0517@2|Bacteria,4NDXQ@976|Bacteroidetes,2FMKX@200643|Bacteroidia,22WM4@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the synthesis of xanthosine monophosphate by the NAD dependent oxidation of inosine monophosphate - - 1.1.1.205 ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 M00050 R01130,R08240 RC00143,RC02207 ko00000,ko00001,ko00002,ko01000,ko04147 - - - CBS,IMPDH LIIFOLDO_00584 435591.BDI_0091 5.92e-175 487.0 COG1741@1|root,COG1741@2|Bacteria,4NGJ5@976|Bacteroidetes,2FPC1@200643|Bacteroidia,22XR8@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the pirin family - - - ko:K06911 - - - - ko00000 - - - Pirin LIIFOLDO_00585 435591.BDI_0092 0.0 880.0 COG2304@1|root,COG2304@2|Bacteria,4NFNQ@976|Bacteroidetes,2FMMK@200643|Bacteroidia,22VUS@171551|Porphyromonadaceae 976|Bacteroidetes S Peptidase M64 - - - - - - - - - - - - M64_N,Peptidase_M64 LIIFOLDO_00586 435591.BDI_0093 1.23e-110 318.0 COG3467@1|root,COG3467@2|Bacteria,4NPGX@976|Bacteroidetes,2FSZ2@200643|Bacteroidia,22YF9@171551|Porphyromonadaceae 976|Bacteroidetes S Pyridoxamine 5'-phosphate oxidase nimB - - ko:K07005 - - - - ko00000 - - - Pyridox_ox_2 LIIFOLDO_00587 435591.BDI_0094 1.74e-154 433.0 COG0450@1|root,COG0450@2|Bacteria,4NEDT@976|Bacteroidetes,2FMG5@200643|Bacteroidia,22XPQ@171551|Porphyromonadaceae 976|Bacteroidetes O C-terminal domain of 1-Cys peroxiredoxin ahpC - 1.11.1.15 ko:K03386 ko04214,map04214 - - - ko00000,ko00001,ko01000,ko04147 - - - 1-cysPrx_C,AhpC-TSA LIIFOLDO_00588 435591.BDI_0095 0.0 1222.0 COG0642@1|root,COG2205@2|Bacteria,4NDXU@976|Bacteroidetes,2FM06@200643|Bacteroidia 976|Bacteroidetes T Psort location CytoplasmicMembrane, score - - - - - - - - - - - - HATPase_c,HisKA,PAS_4,PAS_9,Response_reg LIIFOLDO_00589 435591.BDI_0096 1.65e-283 776.0 COG0517@1|root,COG4175@1|root,COG0517@2|Bacteria,COG4175@2|Bacteria,4PM3T@976|Bacteroidetes,2FMA7@200643|Bacteroidia,22Y6H@171551|Porphyromonadaceae 976|Bacteroidetes E Domain in cystathionine beta-synthase and other proteins. proV - 3.6.3.32 ko:K02000 ko02010,map02010 M00208 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.12 - - ABC_tran,CBS LIIFOLDO_00590 435591.BDI_0097 2.58e-189 526.0 COG4176@1|root,COG4176@2|Bacteria,4NH0P@976|Bacteroidetes,2FP5Z@200643|Bacteroidia,22YT1@171551|Porphyromonadaceae 976|Bacteroidetes P Binding-protein-dependent transport system inner membrane component - - - ko:K02001 ko02010,map02010 M00208 - - ko00000,ko00001,ko00002,ko02000 3.A.1.12 - - BPD_transp_1 LIIFOLDO_00591 435591.BDI_0098 2.55e-215 594.0 COG2113@1|root,COG2113@2|Bacteria,4NNAN@976|Bacteroidetes,2FMEQ@200643|Bacteroidia,231XM@171551|Porphyromonadaceae 976|Bacteroidetes E Substrate binding domain of ABC-type glycine betaine transport system - - - ko:K02002 ko02010,map02010 M00208 - - ko00000,ko00001,ko00002,ko02000 3.A.1.12 - - OpuAC LIIFOLDO_00592 435591.BDI_0099 5.31e-185 513.0 COG2755@1|root,COG2755@2|Bacteria,4NP73@976|Bacteroidetes,2FSF5@200643|Bacteroidia 976|Bacteroidetes E GDSL-like Lipase/Acylhydrolase family - - - - - - - - - - - - Lipase_GDSL_2 LIIFOLDO_00593 435591.BDI_0100 5e-111 319.0 COG1528@1|root,COG1528@2|Bacteria,4NGS7@976|Bacteroidetes,2FQD1@200643|Bacteroidia,22Y73@171551|Porphyromonadaceae 976|Bacteroidetes P Iron-storage protein ftnA - 1.16.3.2 ko:K02217 - - - - ko00000,ko01000 - - - Ferritin LIIFOLDO_00594 435591.BDI_0101 2.58e-93 273.0 COG0071@1|root,COG0071@2|Bacteria,4NQXY@976|Bacteroidetes,2FS35@200643|Bacteroidia,22Y68@171551|Porphyromonadaceae 976|Bacteroidetes O Belongs to the small heat shock protein (HSP20) family hsp20 - - ko:K13993 ko04141,map04141 - - - ko00000,ko00001,ko03110 - - - HSP20 LIIFOLDO_00595 435591.BDI_0102 2.16e-149 420.0 COG1051@1|root,COG1051@2|Bacteria,4NK6B@976|Bacteroidetes,2FPVU@200643|Bacteroidia,22ZKH@171551|Porphyromonadaceae 976|Bacteroidetes F Hydrolase of X-linked nucleoside diphosphate N terminal - - - - - - - - - - - - HAD_2,NUDIX,Nudix_N LIIFOLDO_00596 435591.BDI_0103 7.19e-83 244.0 COG3254@1|root,COG3254@2|Bacteria,4NQAA@976|Bacteroidetes,2G3CU@200643|Bacteroidia,22YA8@171551|Porphyromonadaceae 976|Bacteroidetes G L-rhamnose mutarotase - - 5.1.3.32 ko:K03534 - - R10819 RC00563 ko00000,ko01000 - - - rhaM LIIFOLDO_00597 435591.BDI_0104 4.55e-285 780.0 COG0738@1|root,COG0738@2|Bacteria,4NEYR@976|Bacteroidetes,2FP5F@200643|Bacteroidia,22W0X@171551|Porphyromonadaceae 976|Bacteroidetes G Major Facilitator Superfamily - - - ko:K02429 - - - - ko00000,ko02000 2.A.1.7 - - MFS_1 LIIFOLDO_00600 435591.BDI_0107 3.51e-187 521.0 COG1360@1|root,COG1360@2|Bacteria,4NF2Y@976|Bacteroidetes,2FNVT@200643|Bacteroidia,22YDP@171551|Porphyromonadaceae 976|Bacteroidetes N OmpA family - - - ko:K02557 ko02030,ko02040,map02030,map02040 - - - ko00000,ko00001,ko02000,ko02035 1.A.30.1 - - OmpA LIIFOLDO_00601 435591.BDI_0108 7.34e-151 422.0 COG3005@1|root,COG3005@2|Bacteria,4NK7R@976|Bacteroidetes,2FPIJ@200643|Bacteroidia,22XQI@171551|Porphyromonadaceae 976|Bacteroidetes C NapC/NirT cytochrome c family, N-terminal region nrfH - - ko:K15876 ko00910,ko01120,map00910,map01120 M00530 R05712 RC00176 ko00000,ko00001,ko00002 - - - Cytochrom_NNT LIIFOLDO_00602 435591.BDI_0109 0.0 1010.0 COG3303@1|root,COG3303@2|Bacteria,4NG0P@976|Bacteroidetes,2FP37@200643|Bacteroidia,22WUS@171551|Porphyromonadaceae 976|Bacteroidetes C Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process nrfA GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0006091,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015980,GO:0016491,GO:0016661,GO:0016662,GO:0019645,GO:0020037,GO:0022900,GO:0022904,GO:0030288,GO:0030313,GO:0031975,GO:0042279,GO:0042597,GO:0044237,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0097159,GO:0098809,GO:1901363 1.7.2.2 ko:K03385 ko00910,ko01120,ko05132,map00910,map01120,map05132 M00530 R05712 RC00176 ko00000,ko00001,ko00002,ko01000 - - - Cytochrom_C552 LIIFOLDO_00603 435591.BDI_3471 0.0 1808.0 COG1506@1|root,COG1506@2|Bacteria,4NDVD@976|Bacteroidetes,2FPXW@200643|Bacteroidia,22WN5@171551|Porphyromonadaceae 976|Bacteroidetes E Prolyl oligopeptidase family - - - - - - - - - - - - Peptidase_S9 LIIFOLDO_00606 435591.BDI_3470 1.54e-205 572.0 COG4191@1|root,COG4191@2|Bacteria,4PMUQ@976|Bacteroidetes 976|Bacteroidetes T Histidine kinase-like ATPases - - - - - - - - - - - - HATPase_c LIIFOLDO_00607 435591.BDI_3469 9.13e-103 303.0 COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,2FMRV@200643|Bacteroidia,22W60@171551|Porphyromonadaceae 976|Bacteroidetes T COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains - - - - - - - - - - - - HTH_8,Response_reg,Sigma54_activat LIIFOLDO_00608 435591.BDI_3468 0.0 1499.0 COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,2FN93@200643|Bacteroidia,22WTA@171551|Porphyromonadaceae 976|Bacteroidetes V FtsX-like permease family - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD LIIFOLDO_00609 435591.BDI_3463 0.0 862.0 COG5276@1|root,COG5276@2|Bacteria,4NG4W@976|Bacteroidetes,2FNZ8@200643|Bacteroidia,22XIA@171551|Porphyromonadaceae 976|Bacteroidetes S LVIVD repeat - - - - - - - - - - - - LVIVD LIIFOLDO_00610 435591.BDI_3462 6.7e-303 829.0 COG3147@1|root,COG3147@2|Bacteria,4NR05@976|Bacteroidetes,2FMFP@200643|Bacteroidia,22XTN@171551|Porphyromonadaceae 976|Bacteroidetes S Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl,OMP_b-brl_2 LIIFOLDO_00611 435591.BDI_3461 4.65e-127 361.0 COG1595@1|root,COG1595@2|Bacteria,4NQCH@976|Bacteroidetes,2G2VX@200643|Bacteroidia,22XNA@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 LIIFOLDO_00612 411477.PARMER_01658 7.1e-104 310.0 2C8MF@1|root,2ZKMZ@2|Bacteria,4P812@976|Bacteroidetes,2FVI1@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00613 435591.BDI_3459 7.07e-273 746.0 2EG5K@1|root,339XG@2|Bacteria,4NVFE@976|Bacteroidetes,2FPJS@200643|Bacteroidia,230QC@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4249) - - - - - - - - - - - - DUF4249 LIIFOLDO_00614 435591.BDI_3458 0.0 1793.0 COG1629@1|root,COG4771@2|Bacteria,4NF4B@976|Bacteroidetes,2FM7I@200643|Bacteroidia,22XCB@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent receptor plug domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec LIIFOLDO_00615 435591.BDI_3457 2.36e-174 494.0 2DQ4J@1|root,334Q5@2|Bacteria,4NVYX@976|Bacteroidetes,2FVYP@200643|Bacteroidia,22YZ9@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4249) - - - - - - - - - - - - DUF4249 LIIFOLDO_00616 435591.BDI_3456 0.0 1729.0 COG1629@1|root,COG4771@2|Bacteria,4NF4B@976|Bacteroidetes,2FM7I@200643|Bacteroidia,22XCB@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent receptor plug domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_00617 435591.BDI_3455 5.22e-193 536.0 COG3712@1|root,COG3712@2|Bacteria,4NSK2@976|Bacteroidetes,2FSKZ@200643|Bacteroidia,22YFD@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR LIIFOLDO_00619 435591.BDI_3454 2.33e-197 546.0 2DYJS@1|root,34A44@2|Bacteria,4P5XU@976|Bacteroidetes,2FUYK@200643|Bacteroidia 976|Bacteroidetes S Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl_2 LIIFOLDO_00620 435591.BDI_3453 2e-115 331.0 COG1595@1|root,COG1595@2|Bacteria,4NP39@976|Bacteroidetes,2FP42@200643|Bacteroidia,22Y53@171551|Porphyromonadaceae 976|Bacteroidetes K RNA polymerase sigma-70 factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 LIIFOLDO_00621 435591.BDI_3452 1.14e-256 703.0 COG0180@1|root,COG0180@2|Bacteria,4NETX@976|Bacteroidetes,2FMAT@200643|Bacteroidia,22VZJ@171551|Porphyromonadaceae 976|Bacteroidetes J Tryptophanyl-tRNA synthetase trpS - 6.1.1.2 ko:K01867 ko00970,map00970 M00359,M00360 R03664 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - tRNA-synt_1b LIIFOLDO_00622 435591.BDI_3451 2.62e-55 173.0 COG4104@1|root,COG4104@2|Bacteria,4P9I1@976|Bacteroidetes,2G1R6@200643|Bacteroidia,23139@171551|Porphyromonadaceae 976|Bacteroidetes S PAAR motif - - - - - - - - - - - - PAAR_motif LIIFOLDO_00623 435591.BDI_3450 1.15e-210 583.0 COG0697@1|root,COG0697@2|Bacteria,4NK8U@976|Bacteroidetes,2FNMF@200643|Bacteroidia,22XPM@171551|Porphyromonadaceae 976|Bacteroidetes EG EamA-like transporter family - - - - - - - - - - - - EamA LIIFOLDO_00624 1235803.C825_02598 2.34e-80 261.0 298AE@1|root,2ZVFY@2|Bacteria,4P8XC@976|Bacteroidetes,2FMW3@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - DUF4933,DUF5128 LIIFOLDO_00625 435591.BDI_3447 1.91e-282 771.0 COG1373@1|root,COG1373@2|Bacteria,4NE3E@976|Bacteroidetes,2FP33@200643|Bacteroidia,23032@171551|Porphyromonadaceae 976|Bacteroidetes S AAA domain - - - ko:K07133 - - - - ko00000 - - - AAA_14 LIIFOLDO_00626 435591.BDI_3446 0.0 1378.0 COG1305@1|root,COG1305@2|Bacteria,4NGMN@976|Bacteroidetes,2FM89@200643|Bacteroidia,22W96@171551|Porphyromonadaceae 976|Bacteroidetes E non supervised orthologous group - - - - - - - - - - - - Transglut_core LIIFOLDO_00627 435591.BDI_3445 1.26e-242 667.0 COG3710@1|root,COG3710@2|Bacteria,4P6VC@976|Bacteroidetes 976|Bacteroidetes K Transcriptional regulator - - - - - - - - - - - - Trans_reg_C LIIFOLDO_00629 435591.BDI_3443 1.15e-260 713.0 COG3391@1|root,COG3391@2|Bacteria,4NM81@976|Bacteroidetes,2FP02@200643|Bacteroidia,22YC4@171551|Porphyromonadaceae 976|Bacteroidetes S TolB-like 6-blade propeller-like - - - - - - - - - - - - TolB_like LIIFOLDO_00630 435591.BDI_3442 3.44e-202 560.0 2BZEB@1|root,2ZMZD@2|Bacteria,4NMWK@976|Bacteroidetes,2FQNP@200643|Bacteroidia,22XQ3@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF1573) - - - - - - - - - - - - DUF1573 LIIFOLDO_00631 411477.PARMER_01680 1.23e-11 61.6 2DCRY@1|root,2ZF47@2|Bacteria,4P972@976|Bacteroidetes 976|Bacteroidetes S NVEALA protein - - - - - - - - - - - - NVEALA LIIFOLDO_00632 435591.BDI_3440 4.51e-263 719.0 COG3391@1|root,COG3391@2|Bacteria,4NU1X@976|Bacteroidetes,2FR4G@200643|Bacteroidia 976|Bacteroidetes S TolB-like 6-blade propeller-like - - - - - - - - - - - - TolB_like LIIFOLDO_00633 435591.BDI_3439 5.72e-229 629.0 COG0681@1|root,COG0681@2|Bacteria,4NJXI@976|Bacteroidetes,2FNKZ@200643|Bacteroidia,22XP5@171551|Porphyromonadaceae 976|Bacteroidetes U Belongs to the peptidase S26 family - - 3.4.21.89 ko:K03100 ko02024,ko03060,map02024,map03060 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_S24,Peptidase_S26 LIIFOLDO_00634 435591.BDI_3438 0.0 908.0 COG1305@1|root,COG1305@2|Bacteria,4NGMN@976|Bacteroidetes,2FM89@200643|Bacteroidia,22W96@171551|Porphyromonadaceae 976|Bacteroidetes E non supervised orthologous group - - - - - - - - - - - - Transglut_core LIIFOLDO_00635 435591.BDI_3437 0.0 1183.0 COG0457@1|root,COG3307@1|root,COG0457@2|Bacteria,COG3307@2|Bacteria,4NJ9U@976|Bacteroidetes,2FMEI@200643|Bacteroidia,22XAU@171551|Porphyromonadaceae 976|Bacteroidetes M O-Antigen ligase - - - - - - - - - - - - ANAPC3,TPR_8,Wzy_C LIIFOLDO_00636 435591.BDI_3436 7.89e-246 676.0 COG0845@1|root,COG0845@2|Bacteria,4NHJH@976|Bacteroidetes,2FP9C@200643|Bacteroidia,22VUH@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - - - - - - - - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 LIIFOLDO_00637 435591.BDI_3435 0.0 1903.0 COG0841@1|root,COG0841@2|Bacteria,4NE3H@976|Bacteroidetes,2FN4H@200643|Bacteroidia,22WXN@171551|Porphyromonadaceae 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - - - - - - - - - - ACR_tran LIIFOLDO_00638 435591.BDI_3434 0.0 963.0 COG1538@1|root,COG1538@2|Bacteria,4NGXM@976|Bacteroidetes,2FMD9@200643|Bacteroidia,22XFV@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - - - - - - - - - - OEP LIIFOLDO_00639 435591.BDI_3433 0.0 2076.0 COG0841@1|root,COG0841@2|Bacteria,4NH0G@976|Bacteroidetes,2FM3G@200643|Bacteroidia,22X2G@171551|Porphyromonadaceae 976|Bacteroidetes V AcrB/AcrD/AcrF family - - - - - - - - - - - - ACR_tran LIIFOLDO_00640 435591.BDI_3432 0.0 935.0 COG1649@1|root,COG1649@2|Bacteria,4NGFW@976|Bacteroidetes,2FPDY@200643|Bacteroidia,23055@171551|Porphyromonadaceae 976|Bacteroidetes S PFAM Uncharacterised BCR, COG1649 - - - - - - - - - - - - CBM9_1,GHL10 LIIFOLDO_00641 435591.BDI_3431 2.05e-83 246.0 2DW70@1|root,33YUD@2|Bacteria,4P4P0@976|Bacteroidetes,2FSIR@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - LIIFOLDO_00642 435591.BDI_3430 5.8e-261 714.0 COG1429@1|root,COG1429@2|Bacteria,4P0BG@976|Bacteroidetes,2FMJ7@200643|Bacteroidia 976|Bacteroidetes H COG NOG08812 non supervised orthologous group - - - - - - - - - - - - AAA-ATPase_like,PDDEXK_9 LIIFOLDO_00643 1235803.C825_00599 9.25e-34 128.0 COG1429@1|root,COG1429@2|Bacteria,4P0BG@976|Bacteroidetes,2FMJ7@200643|Bacteroidia 976|Bacteroidetes H COG NOG08812 non supervised orthologous group - - - - - - - - - - - - AAA-ATPase_like,PDDEXK_9 LIIFOLDO_00645 435591.BDI_3426 0.0 1486.0 COG1404@1|root,COG1404@2|Bacteria,4NF1M@976|Bacteroidetes,2FPU1@200643|Bacteroidia,22YRY@171551|Porphyromonadaceae 976|Bacteroidetes O Subtilase family - - - - - - - - - - - - Peptidase_S8,SPOR LIIFOLDO_00646 435591.BDI_3171 1.11e-84 249.0 COG0509@1|root,COG0509@2|Bacteria,4NQ35@976|Bacteroidetes,2FT3J@200643|Bacteroidia,22Y67@171551|Porphyromonadaceae 976|Bacteroidetes E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein gcvH - - ko:K02437 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 M00532 R01221 RC00022,RC02834 ko00000,ko00001,ko00002 - - - GCV_H LIIFOLDO_00647 435591.BDI_3172 8.44e-107 309.0 COG0041@1|root,COG0041@2|Bacteria,4NME9@976|Bacteroidetes,2FMWN@200643|Bacteroidia,22XMM@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) purE - 5.4.99.18 ko:K01588 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R07405 RC01947 ko00000,ko00001,ko00002,ko01000 - - - AIRC LIIFOLDO_00648 435591.BDI_3173 0.0 1210.0 COG0821@1|root,COG0821@2|Bacteria,4NE63@976|Bacteroidetes,2FM97@200643|Bacteroidia,22WAH@171551|Porphyromonadaceae 976|Bacteroidetes I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate ispG GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 ko:K03526 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R08689,R10859 RC01486 ko00000,ko00001,ko00002,ko01000 - - - GcpE LIIFOLDO_00649 435591.BDI_3174 8.62e-102 294.0 COG0756@1|root,COG0756@2|Bacteria,4NNI4@976|Bacteroidetes,2FR7A@200643|Bacteroidia,22XVH@171551|Porphyromonadaceae 976|Bacteroidetes F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA dut GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 ko:K01520 ko00240,ko00983,ko01100,map00240,map00983,map01100 M00053 R02100,R11896 RC00002 ko00000,ko00001,ko00002,ko01000,ko03400 - - - dUTPase LIIFOLDO_00650 435591.BDI_3175 0.0 1086.0 COG0457@1|root,COG0457@2|Bacteria,4NDVW@976|Bacteroidetes,2FMY8@200643|Bacteroidia,22WHK@171551|Porphyromonadaceae 976|Bacteroidetes NU Tetratricopeptide repeat - - - - - - - - - - - - TPR_16,TPR_19,TPR_2,TPR_6,TPR_8 LIIFOLDO_00651 435591.BDI_3176 2.34e-203 562.0 2C1B9@1|root,32R9M@2|Bacteria,4NR1Y@976|Bacteroidetes,2FR82@200643|Bacteroidia,22YET@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4292) - - - - - - - - - - - - DUF4292 LIIFOLDO_00652 435591.BDI_3177 1.44e-279 768.0 COG4942@1|root,COG4942@2|Bacteria,4NH2T@976|Bacteroidetes,2FN4U@200643|Bacteroidia,22VZM@171551|Porphyromonadaceae 976|Bacteroidetes D peptidase yibP - - - - - - - - - - - Peptidase_M23 LIIFOLDO_00653 435591.BDI_3178 7.62e-215 592.0 COG0613@1|root,COG0613@2|Bacteria,4PMKK@976|Bacteroidetes 976|Bacteroidetes S PHP domain protein - - - - - - - - - - - - - LIIFOLDO_00654 435591.BDI_3179 0.0 1138.0 COG3408@1|root,COG3408@2|Bacteria,4NI03@976|Bacteroidetes,2FQYR@200643|Bacteroidia,22ZJ3@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 63 C-terminal domain - - - - - - - - - - - - Glyco_hydro_63 LIIFOLDO_00655 435591.BDI_3180 6.17e-284 775.0 COG1785@1|root,COG1785@2|Bacteria,4NG3D@976|Bacteroidetes,2FMNA@200643|Bacteroidia,22XZ0@171551|Porphyromonadaceae 976|Bacteroidetes P Alkaline phosphatase homologues phoA - 3.1.3.1 ko:K01077 ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020 M00126 R02135,R04620 RC00017 ko00000,ko00001,ko00002,ko00537,ko01000,ko04147 - - - Alk_phosphatase,GDPD_2 LIIFOLDO_00656 435591.BDI_3181 0.0 1927.0 COG3537@1|root,COG3537@2|Bacteria,4NDYB@976|Bacteroidetes,2FMQ9@200643|Bacteroidia,22ZBQ@171551|Porphyromonadaceae 976|Bacteroidetes G Fn3 associated - - - - - - - - - - - - CHB_HEX_C_1,Fn3_assoc,Glyco_hydro_92,PA14 LIIFOLDO_00657 435591.BDI_3182 0.0 1123.0 COG0446@1|root,COG0446@2|Bacteria,4NFNP@976|Bacteroidetes,2FQ3J@200643|Bacteroidia,2323B@171551|Porphyromonadaceae 976|Bacteroidetes S Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_00658 435591.BDI_3183 0.0 2175.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FNA2@200643|Bacteroidia,22X9N@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,DUF4974,Plug,TonB_dep_Rec LIIFOLDO_00659 435591.BDI_3184 0.0 964.0 COG1904@1|root,COG1904@2|Bacteria,4NFHS@976|Bacteroidetes,2FMMW@200643|Bacteroidia,22WQJ@171551|Porphyromonadaceae 976|Bacteroidetes G Glucuronate isomerase uxaC - 5.3.1.12 ko:K01812 ko00040,ko01100,map00040,map01100 M00061,M00631 R01482,R01983 RC00376 ko00000,ko00001,ko00002,ko01000 - - - UxaC LIIFOLDO_00660 435591.BDI_3185 6.92e-163 455.0 COG0800@1|root,COG0800@2|Bacteria,4NEFY@976|Bacteroidetes,2FNWD@200643|Bacteroidia,22WNT@171551|Porphyromonadaceae 976|Bacteroidetes G KDPG and KHG aldolase eda - 4.1.2.14,4.1.3.42 ko:K01625 ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200 M00008,M00061,M00308,M00631 R00470,R05605 RC00307,RC00308,RC00435 ko00000,ko00001,ko00002,ko01000 - - - Aldolase LIIFOLDO_00661 435591.BDI_3186 6.1e-255 698.0 COG0524@1|root,COG0524@2|Bacteria,4NFH8@976|Bacteroidetes,2FMY2@200643|Bacteroidia,22X9W@171551|Porphyromonadaceae 976|Bacteroidetes G pfkB family carbohydrate kinase - - 2.7.1.45 ko:K00874 ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200 M00061,M00308,M00631 R01541 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - PfkB LIIFOLDO_00662 435591.BDI_3187 1.55e-99 288.0 COG1672@1|root,COG1672@2|Bacteria,4NIJ4@976|Bacteroidetes,2FM14@200643|Bacteroidia,22VXI@171551|Porphyromonadaceae 976|Bacteroidetes S Predicted AAA-ATPase - - - - - - - - - - - - AAA-ATPase_like,PDDEXK_9 LIIFOLDO_00663 435591.BDI_3188 1.25e-238 655.0 COG0042@1|root,COG0042@2|Bacteria,4NEN4@976|Bacteroidetes,2FM9Z@200643|Bacteroidia,22WST@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines dus - - - - - - - - - - - Dus LIIFOLDO_00664 435591.BDI_3189 7.03e-215 593.0 2C62U@1|root,2ZVV4@2|Bacteria,4P8GH@976|Bacteroidetes,2FPVS@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00666 435591.BDI_3191 8.57e-294 802.0 COG0826@1|root,COG0826@2|Bacteria,4NERN@976|Bacteroidetes,2FN1E@200643|Bacteroidia,22VVZ@171551|Porphyromonadaceae 976|Bacteroidetes O collagenase prtC - - ko:K08303 ko05120,map05120 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_U32 LIIFOLDO_00667 435591.BDI_3192 5.29e-95 276.0 COG0824@1|root,COG0824@2|Bacteria,4NSJR@976|Bacteroidetes,2FS2E@200643|Bacteroidia,22Y6W@171551|Porphyromonadaceae 976|Bacteroidetes S acyl-CoA thioester hydrolase, YbgC YbaW family - - - ko:K07107 - - - - ko00000,ko01000 - - - 4HBT,4HBT_2 LIIFOLDO_00668 435591.BDI_3193 2.16e-263 722.0 COG0758@1|root,COG0758@2|Bacteria,4NF7T@976|Bacteroidetes,2FKYE@200643|Bacteroidia,22WZ4@171551|Porphyromonadaceae 976|Bacteroidetes LU DNA protecting protein DprA dprA - - ko:K04096 - - - - ko00000 - - - DNA_processg_A,HHH_5 LIIFOLDO_00670 435591.BDI_3195 3.82e-258 706.0 COG0793@1|root,COG0793@2|Bacteria,4NFEN@976|Bacteroidetes,2FMMP@200643|Bacteroidia,22WMS@171551|Porphyromonadaceae 976|Bacteroidetes M peptidase S41 - - - - - - - - - - - - Peptidase_S41,Tricorn_C1 LIIFOLDO_00671 435591.BDI_3196 2.44e-209 578.0 29UC5@1|root,30FNJ@2|Bacteria,4NS0Y@976|Bacteroidetes,2FNR7@200643|Bacteroidia,22Y6Z@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3316) - - - - - - - - - - - - DUF3316 LIIFOLDO_00672 435591.BDI_3197 0.0 1773.0 COG0188@1|root,COG0188@2|Bacteria,4NERI@976|Bacteroidetes,2FPAU@200643|Bacteroidia,22WF8@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the type II topoisomerase GyrA ParC subunit family parC - - ko:K02621 - - - - ko00000,ko01000,ko02048,ko03032,ko03036 - - - DNA_topoisoIV LIIFOLDO_00673 435591.BDI_3198 6.4e-188 521.0 2DX7F@1|root,343QT@2|Bacteria,4P6PI@976|Bacteroidetes,2FSXP@200643|Bacteroidia 976|Bacteroidetes S Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl_2 LIIFOLDO_00675 435591.BDI_3200 0.0 1003.0 COG0673@1|root,COG0673@2|Bacteria,4NH13@976|Bacteroidetes,2FPIH@200643|Bacteroidia,22WA6@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA LIIFOLDO_00676 435591.BDI_3201 0.0 1034.0 COG0423@1|root,COG0423@2|Bacteria,4NE1C@976|Bacteroidetes,2FMM2@200643|Bacteroidia,22WCA@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the attachment of glycine to tRNA(Gly) glyQS - 6.1.1.14 ko:K01880 ko00970,map00970 M00359,M00360 R03654 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 - - - HGTP_anticodon,tRNA-synt_2b LIIFOLDO_00677 435591.BDI_3202 4.71e-124 353.0 COG0545@1|root,COG0545@2|Bacteria,4NVE8@976|Bacteroidetes,2FUUP@200643|Bacteroidia,22YMR@171551|Porphyromonadaceae 976|Bacteroidetes M Peptidyl-prolyl cis-trans isomerase - - 5.2.1.8 ko:K01802,ko:K03773 - - - - ko00000,ko01000,ko03110 - - - FKBP_C LIIFOLDO_00678 435591.BDI_3203 3.96e-182 507.0 COG3279@1|root,COG3279@2|Bacteria,4NRFD@976|Bacteroidetes,2FM05@200643|Bacteroidia,22Y7Y@171551|Porphyromonadaceae 976|Bacteroidetes KT LytTr DNA-binding domain - - - - - - - - - - - - LytTR LIIFOLDO_00679 435591.BDI_3204 5.9e-184 511.0 COG4758@1|root,COG4758@2|Bacteria,4NQRE@976|Bacteroidetes,2FMXH@200643|Bacteroidia,22YB9@171551|Porphyromonadaceae 976|Bacteroidetes S Cell wall-active antibiotics response 4TMS YvqF - - - - - - - - - - - - DUF2154 LIIFOLDO_00680 435591.BDI_3205 0.0 2021.0 COG0642@1|root,COG3437@1|root,COG2205@2|Bacteria,COG3437@2|Bacteria,4NDXU@976|Bacteroidetes,2FM06@200643|Bacteroidia 976|Bacteroidetes T Psort location CytoplasmicMembrane, score - - - - - - - - - - - - GAF,GAF_2,HATPase_c,HisKA,Hpt,PAS,PAS_3,PAS_4,PAS_9,Response_reg LIIFOLDO_00681 435591.BDI_3206 2.45e-311 846.0 COG1819@1|root,COG1819@2|Bacteria,4NHMR@976|Bacteroidetes 976|Bacteroidetes CG glycosyl - - - - - - - - - - - - Glyco_transf_28,UDPGT LIIFOLDO_00682 435591.BDI_3207 2.07e-304 828.0 COG0535@1|root,COG0535@2|Bacteria,4PA9R@976|Bacteroidetes,2FWDR@200643|Bacteroidia 976|Bacteroidetes S Radical SAM superfamily - - - - - - - - - - - - Fer4_14,Radical_SAM LIIFOLDO_00684 435591.BDI_3208 5.27e-185 513.0 COG0479@1|root,COG0479@2|Bacteria,4NFR3@976|Bacteroidetes,2FP6Q@200643|Bacteroidia,22W4E@171551|Porphyromonadaceae 976|Bacteroidetes C succinate dehydrogenase frdB - 1.3.5.1,1.3.5.4 ko:K00240 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00149,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002,ko01000 - - - Fer2_3,Fer4_7,Fer4_8 LIIFOLDO_00685 435591.BDI_3209 0.0 1305.0 COG1053@1|root,COG1053@2|Bacteria,4NFDU@976|Bacteroidetes,2FM67@200643|Bacteroidia,22WBE@171551|Porphyromonadaceae 976|Bacteroidetes C SdhA B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC D which are the membrane components and form cytochrome b556 sdhA - 1.3.5.1,1.3.5.4 ko:K00239 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134 M00009,M00011,M00149,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002,ko01000 - - - FAD_binding_2,Succ_DH_flav_C LIIFOLDO_00686 435591.BDI_3210 1.28e-161 452.0 2CAZH@1|root,2Z7RU@2|Bacteria,4NGM5@976|Bacteroidetes,2FM2S@200643|Bacteroidia,22WYG@171551|Porphyromonadaceae 976|Bacteroidetes S fumarate reductase sdhC - - ko:K00241 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00149,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002 - - - Sdh_cyt LIIFOLDO_00687 435591.BDI_1945 4.78e-55 171.0 COG0254@1|root,COG0254@2|Bacteria,4NS7P@976|Bacteroidetes,2FTUG@200643|Bacteroidia,22YDW@171551|Porphyromonadaceae 976|Bacteroidetes J 50S ribosomal protein L31 type B rpmE2 - - ko:K02909 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L31 LIIFOLDO_00688 435591.BDI_1946 3.9e-267 731.0 COG2334@1|root,COG2334@2|Bacteria,4NH00@976|Bacteroidetes,2FKYD@200643|Bacteroidia,22XFX@171551|Porphyromonadaceae 976|Bacteroidetes S Phosphotransferase enzyme family mdsC - - - - - - - - - - - APH LIIFOLDO_00689 435591.BDI_1947 8.31e-91 265.0 COG2755@1|root,COG2755@2|Bacteria,4NQAK@976|Bacteroidetes 976|Bacteroidetes E Stress responsive alpha-beta barrel domain protein - - - - - - - - - - - - Dabb LIIFOLDO_00690 435591.BDI_1948 9.23e-305 832.0 COG5000@1|root,COG5000@2|Bacteria,4NFQN@976|Bacteroidetes,2FQJW@200643|Bacteroidia,22Z6G@171551|Porphyromonadaceae 976|Bacteroidetes T PAS domain - - - - - - - - - - - - HATPase_c,PAS,PAS_8 LIIFOLDO_00691 435591.BDI_1949 1e-315 861.0 COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,2FMPG@200643|Bacteroidia,231SJ@171551|Porphyromonadaceae 976|Bacteroidetes T Sigma-54 interaction domain - - - ko:K02481 - - - - ko00000,ko02022 - - - HTH_8,Response_reg,Sigma54_activat LIIFOLDO_00692 435591.BDI_1950 0.0 956.0 COG1538@1|root,COG1538@2|Bacteria,4NGXM@976|Bacteroidetes,2FMD9@200643|Bacteroidia,22XGY@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - - - - - - - - - - OEP LIIFOLDO_00693 435591.BDI_1951 1.13e-157 443.0 COG3279@1|root,COG3279@2|Bacteria,4NF8U@976|Bacteroidetes,2FMI5@200643|Bacteroidia,22ZCF@171551|Porphyromonadaceae 976|Bacteroidetes T LytTr DNA-binding domain - - - - - - - - - - - - LytTR,Response_reg LIIFOLDO_00694 435591.BDI_1952 5.59e-236 650.0 COG2972@1|root,COG2972@2|Bacteria,4NH51@976|Bacteroidetes,2G2VE@200643|Bacteroidia 976|Bacteroidetes T Histidine kinase - - - - - - - - - - - - His_kinase LIIFOLDO_00695 435591.BDI_1953 1.03e-75 227.0 COG0818@1|root,COG0818@2|Bacteria,4NQ39@976|Bacteroidetes,2FSJ8@200643|Bacteroidia,22YEY@171551|Porphyromonadaceae 976|Bacteroidetes M Prokaryotic diacylglycerol kinase dgkA - 2.7.1.107,2.7.1.66 ko:K00887,ko:K00901 ko00550,ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00550,map00561,map00564,map01100,map01110,map04070,map04072,map05231 - R02240,R05626 RC00002,RC00017 ko00000,ko00001,ko01000 - - - DAGK_prokar LIIFOLDO_00696 435591.BDI_1954 2.58e-132 375.0 COG0671@1|root,COG0671@2|Bacteria,4NP0U@976|Bacteroidetes,2G39R@200643|Bacteroidia,22Y5F@171551|Porphyromonadaceae 976|Bacteroidetes I Acid phosphatase homologues - - - - - - - - - - - - PAP2 LIIFOLDO_00697 435591.BDI_1957 2.1e-308 840.0 COG0577@1|root,COG0577@2|Bacteria,4NHA3@976|Bacteroidetes,2FNQW@200643|Bacteroidia,22XXS@171551|Porphyromonadaceae 976|Bacteroidetes V FtsX-like permease family - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD LIIFOLDO_00698 435591.BDI_1958 2.36e-305 833.0 COG0577@1|root,COG0577@2|Bacteria,4NI8K@976|Bacteroidetes,2FQDU@200643|Bacteroidia,231FP@171551|Porphyromonadaceae 976|Bacteroidetes V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD LIIFOLDO_00699 435591.BDI_1959 1.66e-311 848.0 COG0577@1|root,COG0577@2|Bacteria,4P4VE@976|Bacteroidetes,2FPDE@200643|Bacteroidia 976|Bacteroidetes V Psort location CytoplasmicMembrane, score - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD LIIFOLDO_00700 435591.BDI_1960 3.79e-316 861.0 COG0577@1|root,COG0577@2|Bacteria,4NI8K@976|Bacteroidetes,2FM0K@200643|Bacteroidia 976|Bacteroidetes V COG0577 ABC-type antimicrobial peptide transport system permease component - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD LIIFOLDO_00701 435591.BDI_1961 1.97e-294 804.0 COG0577@1|root,COG0577@2|Bacteria,4NHA3@976|Bacteroidetes,2FNQW@200643|Bacteroidia,22YW4@171551|Porphyromonadaceae 976|Bacteroidetes V FtsX-like permease family - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD LIIFOLDO_00702 435591.BDI_1962 2.56e-309 843.0 COG0577@1|root,COG0577@2|Bacteria,4NI8K@976|Bacteroidetes 976|Bacteroidetes V COG0577 ABC-type antimicrobial peptide transport system permease component - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD LIIFOLDO_00704 435591.BDI_1964 2.59e-152 428.0 COG1136@1|root,COG1136@2|Bacteria,4NFDW@976|Bacteroidetes,2FPST@200643|Bacteroidia,22WS2@171551|Porphyromonadaceae 976|Bacteroidetes V ABC transporter, ATP-binding protein ytrE_3 - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran LIIFOLDO_00705 435591.BDI_1965 4.79e-311 847.0 COG0577@1|root,COG0577@2|Bacteria,4NHA3@976|Bacteroidetes,2FNQW@200643|Bacteroidia,22XXS@171551|Porphyromonadaceae 976|Bacteroidetes V FtsX-like permease family - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD LIIFOLDO_00706 435591.BDI_1966 1.7e-298 815.0 COG0577@1|root,COG0577@2|Bacteria,4NI8K@976|Bacteroidetes,2FN4D@200643|Bacteroidia 976|Bacteroidetes V Psort location CytoplasmicMembrane, score 10.00 - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD LIIFOLDO_00707 435591.BDI_1967 2.15e-75 225.0 COG2026@1|root,COG2026@2|Bacteria,4NW0W@976|Bacteroidetes 976|Bacteroidetes DJ Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - RelE LIIFOLDO_00709 435591.BDI_1969 3.64e-310 844.0 COG0577@1|root,COG0577@2|Bacteria,4NHA3@976|Bacteroidetes,2FSB7@200643|Bacteroidia,22Z98@171551|Porphyromonadaceae 976|Bacteroidetes V FtsX-like permease family - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD LIIFOLDO_00710 435591.BDI_1970 1.62e-293 802.0 COG0577@1|root,COG0577@2|Bacteria,4NI8K@976|Bacteroidetes,2FR5S@200643|Bacteroidia,231S6@171551|Porphyromonadaceae 976|Bacteroidetes V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD LIIFOLDO_00711 435591.BDI_1971 8.28e-257 711.0 COG0845@1|root,COG0845@2|Bacteria,4NIJI@976|Bacteroidetes,2FNGW@200643|Bacteroidia,22WWG@171551|Porphyromonadaceae 976|Bacteroidetes M HlyD family secretion protein - - - ko:K02005 - - - - ko00000 - - - Biotin_lipoyl_2,HlyD_3,OEP LIIFOLDO_00712 435591.BDI_1972 2.12e-166 466.0 2DQW5@1|root,332S8@2|Bacteria,4NYXZ@976|Bacteroidetes,2FVER@200643|Bacteroidia,22Z0T@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00713 435591.BDI_1973 3.06e-198 554.0 2DQW5@1|root,32UPY@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - LIIFOLDO_00714 435591.BDI_1975 2.53e-199 552.0 295Z7@1|root,2ZTA0@2|Bacteria,4NP7A@976|Bacteroidetes,2FPCX@200643|Bacteroidia 976|Bacteroidetes S COG NOG14441 non supervised orthologous group - - - - - - - - - - - - PepSY_like LIIFOLDO_00715 435591.BDI_1976 0.0 1726.0 COG3250@1|root,COG3250@2|Bacteria,4NEWN@976|Bacteroidetes,2FPM1@200643|Bacteroidia,22WWF@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the glycosyl hydrolase 2 family - - 3.2.1.23 ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 - R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 - - - DUF4982,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N LIIFOLDO_00716 435591.BDI_1977 2.71e-288 791.0 COG2704@1|root,COG2704@2|Bacteria,4NGDF@976|Bacteroidetes,2FMD5@200643|Bacteroidia,22XEM@171551|Porphyromonadaceae 976|Bacteroidetes S Anaerobic c4-dicarboxylate membrane transporter dcuB - - ko:K07791,ko:K07792 ko02020,map02020 - - - ko00000,ko00001,ko02000 2.A.13.1 - - DcuA_DcuB LIIFOLDO_00717 435591.BDI_1978 5.41e-84 247.0 COG0526@1|root,COG0526@2|Bacteria,4PMUP@976|Bacteroidetes,2G0GV@200643|Bacteroidia,231IA@171551|Porphyromonadaceae 976|Bacteroidetes O F plasmid transfer operon protein - - - - - - - - - - - - Thioredoxin LIIFOLDO_00718 435591.BDI_1979 1.11e-281 770.0 COG1171@1|root,COG1171@2|Bacteria,4NEY2@976|Bacteroidetes,2FNV5@200643|Bacteroidia,22Y2P@171551|Porphyromonadaceae 976|Bacteroidetes E Pyridoxal-phosphate dependent enzyme ilvA - 4.3.1.19 ko:K01754 ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230 M00570 R00220,R00996 RC00418,RC02600 ko00000,ko00001,ko00002,ko01000 - - - PALP LIIFOLDO_00719 435591.BDI_1980 4.49e-60 185.0 COG1846@1|root,COG1846@2|Bacteria,4PKFS@976|Bacteroidetes,2FTYE@200643|Bacteroidia,22YI4@171551|Porphyromonadaceae 976|Bacteroidetes K Winged helix DNA-binding domain marR - - - - - - - - - - - HTH_34 LIIFOLDO_00720 435591.BDI_1981 2.15e-145 410.0 295IV@1|root,2ZSWC@2|Bacteria,4NVMA@976|Bacteroidetes,2FQW1@200643|Bacteroidia,22YIH@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location CytoplasmicMembrane, score - - - - - - - - - - - - - LIIFOLDO_00721 435591.BDI_1982 0.0 1556.0 COG4206@1|root,COG4206@2|Bacteria,4PMY1@976|Bacteroidetes,2G0KA@200643|Bacteroidia,22ZYN@171551|Porphyromonadaceae 976|Bacteroidetes H Outer membrane protein beta-barrel family - - - - - - - - - - - - CarbopepD_reg_2,OMP_b-brl_3 LIIFOLDO_00722 435591.BDI_1983 2.44e-82 243.0 COG4704@1|root,COG4704@2|Bacteria,4NX50@976|Bacteroidetes,2FV7S@200643|Bacteroidia 976|Bacteroidetes S Uncharacterized protein conserved in bacteria (DUF2141) - - - - - - - - - - - - DUF2141 LIIFOLDO_00723 435591.BDI_1984 1.77e-125 357.0 COG2110@1|root,COG2110@2|Bacteria,4NNRH@976|Bacteroidetes,2FMVR@200643|Bacteroidia,22Y29@171551|Porphyromonadaceae 976|Bacteroidetes S Appr-1'-p processing enzyme - - - - - - - - - - - - Macro LIIFOLDO_00724 435591.BDI_1985 9.83e-151 424.0 29A5Q@1|root,2ZX6Q@2|Bacteria,4NP43@976|Bacteroidetes,2FPGZ@200643|Bacteroidia,22XXX@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00725 435591.BDI_1986 2.21e-228 630.0 COG1702@1|root,COG1702@2|Bacteria,4NDYV@976|Bacteroidetes,2FMIF@200643|Bacteroidia,22W7X@171551|Porphyromonadaceae 976|Bacteroidetes T Phosphate starvation protein PhoH phoH - - ko:K06217 - - - - ko00000 - - - PhoH LIIFOLDO_00726 435591.BDI_1987 4.48e-230 633.0 COG0152@1|root,COG0152@2|Bacteria,4NF1Z@976|Bacteroidetes,2FPKZ@200643|Bacteroidia,22WD6@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis purC GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 ko:K01923 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04591 RC00064,RC00162 ko00000,ko00001,ko00002,ko01000 - - - SAICAR_synt LIIFOLDO_00727 435591.BDI_1988 3.28e-177 493.0 COG0500@1|root,COG2226@2|Bacteria,4NEDR@976|Bacteroidetes,2FMI3@200643|Bacteroidia,22XH4@171551|Porphyromonadaceae 976|Bacteroidetes H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) menG - 2.1.1.163,2.1.1.201 ko:K03183 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116,M00117 R04990,R04993,R06859,R08774,R09736 RC00003,RC01253,RC01662 ko00000,ko00001,ko00002,ko01000 - - - Ubie_methyltran LIIFOLDO_00728 435591.BDI_1989 3.42e-179 498.0 COG0169@1|root,COG0169@2|Bacteria,4NEBJ@976|Bacteroidetes,2FP6C@200643|Bacteroidia,22WMN@171551|Porphyromonadaceae 976|Bacteroidetes E Shikimate aroE - 1.1.1.25 ko:K00014 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R02413 RC00206 ko00000,ko00001,ko00002,ko01000 - - - Shikimate_dh_N LIIFOLDO_00729 435591.BDI_1990 1.92e-146 412.0 COG2091@1|root,COG2091@2|Bacteria,4NSBI@976|Bacteroidetes,2FN3N@200643|Bacteroidia,22YHK@171551|Porphyromonadaceae 976|Bacteroidetes H Belongs to the P-Pant transferase superfamily sfp - - - - - - - - - - - ACPS LIIFOLDO_00730 435591.BDI_1991 1.8e-136 386.0 293VW@1|root,2ZRB2@2|Bacteria,4NMK7@976|Bacteroidetes,2FUEE@200643|Bacteroidia,22YE1@171551|Porphyromonadaceae 976|Bacteroidetes S Gliding motility-associated lipoprotein GldD gldD - - - - - - - - - - - - LIIFOLDO_00731 435591.BDI_1992 3.97e-310 847.0 COG1253@1|root,COG1253@2|Bacteria,4NDZ7@976|Bacteroidetes,2FMEZ@200643|Bacteroidia,22WK3@171551|Porphyromonadaceae 976|Bacteroidetes S gliding motility-associated protein GldE gldE - - - - - - - - - - - CBS,CorC_HlyC,DUF21 LIIFOLDO_00732 435591.BDI_1993 7.85e-117 334.0 COG0629@1|root,COG0629@2|Bacteria,4NQBK@976|Bacteroidetes,2FT5G@200643|Bacteroidia,22Y9U@171551|Porphyromonadaceae 976|Bacteroidetes L Single-stranded DNA-binding protein ssb - - ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 - - - ko00000,ko00001,ko03029,ko03032,ko03400 - - - SSB LIIFOLDO_00733 435591.BDI_1994 1.79e-269 736.0 COG1194@1|root,COG1194@2|Bacteria,4NDZY@976|Bacteroidetes,2FNMQ@200643|Bacteroidia,22WUP@171551|Porphyromonadaceae 976|Bacteroidetes L A G-specific adenine glycosylase mutY - - ko:K03575 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - EndIII_4Fe-2S,HhH-GPD,NUDIX_4 LIIFOLDO_00734 435591.BDI_2654 8.19e-12 65.1 COG5464@1|root,COG5464@2|Bacteria,4NHVS@976|Bacteroidetes,2G317@200643|Bacteroidia,22Y25@171551|Porphyromonadaceae 976|Bacteroidetes S PD-(D/E)XK nuclease family transposase - - - - - - - - - - - - PDDEXK_2 LIIFOLDO_00735 435591.BDI_2655 1.43e-142 401.0 COG0727@1|root,COG0727@2|Bacteria,4NEPX@976|Bacteroidetes,2FNXY@200643|Bacteroidia,22XM5@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3109) - - - - - - - - - - - - DUF3109 LIIFOLDO_00736 435591.BDI_2656 0.0 1026.0 COG0696@1|root,COG0696@2|Bacteria,4NEQT@976|Bacteroidetes,2FMVJ@200643|Bacteroidia,22W4Q@171551|Porphyromonadaceae 976|Bacteroidetes G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate gpmI - 5.4.2.12 ko:K15633 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003 R01518 RC00536 ko00000,ko00001,ko00002,ko01000 - - - Metalloenzyme,Phosphodiest,iPGM_N LIIFOLDO_00737 435591.BDI_2657 6.35e-163 456.0 COG1451@1|root,COG1451@2|Bacteria,4NNY6@976|Bacteroidetes,2FPFA@200643|Bacteroidia,22Y3J@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function DUF45 - - - ko:K07043 - - - - ko00000 - - - DUF45 LIIFOLDO_00738 435591.BDI_2658 0.0 1825.0 COG1629@1|root,COG4771@2|Bacteria,4PMUZ@976|Bacteroidetes,2FMM0@200643|Bacteroidia 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_00739 435591.BDI_2659 0.0 4882.0 COG4797@1|root,COG4797@2|Bacteria,4PKQS@976|Bacteroidetes,2FP69@200643|Bacteroidia,2322Y@171551|Porphyromonadaceae 976|Bacteroidetes S Motility related/secretion protein sprA - - - - - - - - - - - SprA_N LIIFOLDO_00740 435591.BDI_2660 3.41e-122 350.0 COG0632@1|root,COG0632@2|Bacteria,4NF4E@976|Bacteroidetes,2FNA8@200643|Bacteroidia,22Y0A@171551|Porphyromonadaceae 976|Bacteroidetes L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB ruvA - 3.6.4.12 ko:K03550 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - HHH_5,RuvA_C,RuvA_N LIIFOLDO_00741 435591.BDI_2661 3.51e-180 505.0 COG3386@1|root,COG3386@2|Bacteria,4NF4A@976|Bacteroidetes,2FWB3@200643|Bacteroidia,22Z3T@171551|Porphyromonadaceae 976|Bacteroidetes G SMP-30/Gluconolaconase/LRE-like region - - 3.1.1.17 ko:K01053 ko00030,ko00053,ko00930,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,map00030,map00053,map00930,map01100,map01110,map01120,map01130,map01200,map01220 M00129 R01519,R02933,R03751 RC00537,RC00983 ko00000,ko00001,ko00002,ko01000,ko04147 - - - SGL LIIFOLDO_00742 435591.BDI_2662 0.0 961.0 COG0168@1|root,COG0168@2|Bacteria,4NGMF@976|Bacteroidetes,2FNQZ@200643|Bacteroidia,22W5T@171551|Porphyromonadaceae 976|Bacteroidetes P Potassium transporter trkH - - ko:K03498 - - - - ko00000,ko02000 2.A.38.1,2.A.38.4 - - TrkH LIIFOLDO_00743 435591.BDI_2663 0.0 870.0 COG0569@1|root,COG0569@2|Bacteria,4NE31@976|Bacteroidetes,2FP1F@200643|Bacteroidia,22VXG@171551|Porphyromonadaceae 976|Bacteroidetes P Potassium transporter trkA - - ko:K03499 - - - - ko00000,ko02000 2.A.38.1,2.A.38.4 - - TrkA_C,TrkA_N LIIFOLDO_00744 435591.BDI_2664 0.0 1258.0 COG1154@1|root,COG1154@2|Bacteria,4NDY5@976|Bacteroidetes,2FM50@200643|Bacteroidia,22WDJ@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) dxs - 2.2.1.7 ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 M00096 R05636 RC00032 ko00000,ko00001,ko00002,ko01000 - - - DXP_synthase_N,E1_dh,Transket_pyr,Transketolase_C LIIFOLDO_00747 435591.BDI_2666 4.83e-237 672.0 COG0457@1|root,COG0457@2|Bacteria,4NRRJ@976|Bacteroidetes,2FPTP@200643|Bacteroidia,230YK@171551|Porphyromonadaceae 976|Bacteroidetes T Tetratricopeptide repeat protein - - - - - - - - - - - - TPR_12,TPR_8 LIIFOLDO_00748 435591.BDI_2667 8.04e-185 514.0 COG0483@1|root,COG0483@2|Bacteria,4NI6D@976|Bacteroidetes,2FNAK@200643|Bacteroidia,22X9F@171551|Porphyromonadaceae 976|Bacteroidetes G Inositol monophosphatase family suhB - 3.1.3.25 ko:K01092 ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070 M00131 R01185,R01186,R01187 RC00078 ko00000,ko00001,ko00002,ko01000 - - - Inositol_P LIIFOLDO_00749 435591.BDI_2668 8.96e-150 422.0 COG1629@1|root,COG1629@2|Bacteria,4PJBP@976|Bacteroidetes,2FRBN@200643|Bacteroidia 976|Bacteroidetes P TonB-dependent Receptor Plug Domain - - - - - - - - - - - - Plug LIIFOLDO_00750 435591.BDI_2669 0.0 2969.0 COG2911@1|root,COG2911@2|Bacteria,4NF7F@976|Bacteroidetes,2FPH8@200643|Bacteroidia,22WTX@171551|Porphyromonadaceae 976|Bacteroidetes M TamB, inner membrane protein subunit of TAM complex - - - - - - - - - - - - TamB LIIFOLDO_00751 435591.BDI_2670 0.0 1650.0 COG4775@1|root,COG4775@2|Bacteria,4NE80@976|Bacteroidetes,2G3E0@200643|Bacteroidia,22WAV@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane protein, OMP85 family - - - - - - - - - - - - Bac_surface_Ag LIIFOLDO_00752 435591.BDI_2671 0.0 866.0 29RPH@1|root,313S7@2|Bacteria,4P2MW@976|Bacteroidetes,2FVWS@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00753 435591.BDI_2672 6.05e-219 603.0 COG0010@1|root,COG0010@2|Bacteria,4NE26@976|Bacteroidetes,2FU2Y@200643|Bacteroidia,22YZP@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the arginase family rocF - 3.5.3.1,3.5.3.11 ko:K01476,ko:K01480 ko00220,ko00330,ko01100,ko01110,ko01130,ko01230,ko05146,map00220,map00330,map01100,map01110,map01130,map01230,map05146 M00029,M00133,M00134 R00551,R01157 RC00024,RC00329 ko00000,ko00001,ko00002,ko01000 - - - Arginase LIIFOLDO_00754 435591.BDI_2673 1.51e-301 821.0 COG4992@1|root,COG4992@2|Bacteria,4NE93@976|Bacteroidetes,2FMPQ@200643|Bacteroidia,22WQY@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family rocD - 2.6.1.13 ko:K00819 ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130 - R00667 RC00006,RC00062 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_3 LIIFOLDO_00755 435591.BDI_2674 5.28e-283 773.0 COG0204@1|root,COG0204@2|Bacteria,4NGR9@976|Bacteroidetes,2FM79@200643|Bacteroidia,22VV6@171551|Porphyromonadaceae 976|Bacteroidetes I Acyltransferase - - - - - - - - - - - - Acyltransferase LIIFOLDO_00756 435591.BDI_2675 3.71e-236 649.0 COG1181@1|root,COG1181@2|Bacteria,4NE9P@976|Bacteroidetes,2FNMC@200643|Bacteroidia,22WV1@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the D-alanine--D-alanine ligase family ddl - 6.3.2.4 ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 - R01150 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Dala_Dala_lig_C,Dala_Dala_lig_N LIIFOLDO_00757 435591.BDI_2676 1.35e-264 724.0 COG0564@1|root,COG0564@2|Bacteria,4NEV3@976|Bacteroidetes,2FMD1@200643|Bacteroidia,22W4T@171551|Porphyromonadaceae 976|Bacteroidetes J Responsible for synthesis of pseudouridine from uracil rluD - 5.4.99.23 ko:K06180 - - - - ko00000,ko01000,ko03009 - - - PseudoU_synth_2,S4 LIIFOLDO_00758 435591.BDI_2677 5.48e-143 404.0 COG2815@1|root,COG2815@2|Bacteria,4NSUI@976|Bacteroidetes,2FPS4@200643|Bacteroidia,22YEV@171551|Porphyromonadaceae 976|Bacteroidetes S PASTA domain protein pknB - 2.7.11.1,6.3.2.4 ko:K01921,ko:K08884,ko:K12132 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 - R01150 RC00064,RC00141 ko00000,ko00001,ko01000,ko01001,ko01011 - - - PASTA LIIFOLDO_00759 1235803.C825_02399 1.85e-26 97.1 COG0230@1|root,COG0230@2|Bacteria,4NUTV@976|Bacteroidetes,2FUJ7@200643|Bacteroidia,23132@171551|Porphyromonadaceae 976|Bacteroidetes J Ribosomal protein L34 rpmH - - ko:K02914 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L34 LIIFOLDO_00760 435591.BDI_2678 0.0 1221.0 2DVRJ@1|root,33WW5@2|Bacteria,4P2ZQ@976|Bacteroidetes,2FYDB@200643|Bacteroidia,22YAG@171551|Porphyromonadaceae 976|Bacteroidetes - - - GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0007155,GO:0008150,GO:0009289,GO:0022610,GO:0042995,GO:0044464,GO:0046810,GO:0050840,GO:0098609 - - - - - - - - - - - LIIFOLDO_00763 435591.BDI_2681 9.44e-135 392.0 COG0457@1|root,COG0457@2|Bacteria,4NMG2@976|Bacteroidetes,2FP23@200643|Bacteroidia 976|Bacteroidetes S Tetratricopeptide repeat protein - - - - - - - - - - - - TPR_1,TPR_16,TPR_19,TPR_2,TPR_8 LIIFOLDO_00764 435591.BDI_2682 1.42e-43 143.0 COG3630@1|root,COG3630@2|Bacteria,4NXVZ@976|Bacteroidetes,2FTVB@200643|Bacteroidia,22Z2E@171551|Porphyromonadaceae 976|Bacteroidetes C Oxaloacetate decarboxylase, gamma chain - - 4.1.1.3 ko:K01573 ko00620,ko01100,map00620,map01100 - R00217 RC00040 ko00000,ko00001,ko01000,ko02000 3.B.1.1.1 - - OAD_gamma LIIFOLDO_00765 435591.BDI_1763 0.0 1995.0 COG4206@1|root,COG4206@2|Bacteria,4NZWU@976|Bacteroidetes,2G065@200643|Bacteroidia,22WB2@171551|Porphyromonadaceae 976|Bacteroidetes P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec LIIFOLDO_00766 435591.BDI_1762 0.0 1315.0 2DBCI@1|root,2Z8DZ@2|Bacteria,4NF4Y@976|Bacteroidetes,2FQEW@200643|Bacteroidia,22WNQ@171551|Porphyromonadaceae 976|Bacteroidetes S Susd and RagB outer membrane lipoprotein - - - - - - - - - - - - SusD-like LIIFOLDO_00767 435591.BDI_1761 5.69e-193 535.0 COG0657@1|root,COG0657@2|Bacteria,4NH62@976|Bacteroidetes,2FKYA@200643|Bacteroidia,22XNS@171551|Porphyromonadaceae 976|Bacteroidetes I alpha/beta hydrolase fold - - - - - - - - - - - - Abhydrolase_3,Peptidase_S9 LIIFOLDO_00768 435591.BDI_1760 8.78e-205 567.0 COG0331@1|root,COG0331@2|Bacteria,4NE1D@976|Bacteroidetes,2FM9P@200643|Bacteroidia,22W12@171551|Porphyromonadaceae 976|Bacteroidetes I malonyl CoA-acyl carrier protein transacylase fabD - 2.3.1.39 ko:K00645 ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212 M00082 R01626,R11671 RC00004,RC00039,RC02727 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Acyl_transf_1 LIIFOLDO_00769 435591.BDI_1759 2.33e-35 120.0 COG1826@1|root,COG1826@2|Bacteria,4NUNH@976|Bacteroidetes,2FUQY@200643|Bacteroidia,22YQS@171551|Porphyromonadaceae 976|Bacteroidetes U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system tatA - - ko:K03116 ko03060,ko03070,map03060,map03070 M00336 - - ko00000,ko00001,ko00002,ko02044 2.A.64 - - MttA_Hcf106 LIIFOLDO_00770 435591.BDI_1758 2.31e-191 531.0 COG0805@1|root,COG0805@2|Bacteria,4NEKM@976|Bacteroidetes,2FNUF@200643|Bacteroidia,22WUU@171551|Porphyromonadaceae 976|Bacteroidetes U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes tatC - - ko:K03118 ko03060,ko03070,map03060,map03070 M00336 - - ko00000,ko00001,ko00002,ko02044 2.A.64 - - TatC LIIFOLDO_00771 435591.BDI_1757 3.21e-210 580.0 COG0010@1|root,COG0010@2|Bacteria,4PHMJ@976|Bacteroidetes,2FMTD@200643|Bacteroidia 976|Bacteroidetes E COG0010 Arginase agmatinase formimionoglutamate hydrolase arginase family - - 3.5.3.1 ko:K01476 ko00220,ko00330,ko01100,ko01110,ko01130,ko01230,ko05146,map00220,map00330,map01100,map01110,map01130,map01230,map05146 M00029,M00134 R00551 RC00024,RC00329 ko00000,ko00001,ko00002,ko01000 - - - Arginase LIIFOLDO_00772 435591.BDI_1756 0.0 1605.0 COG3537@1|root,COG3537@2|Bacteria,4NDYB@976|Bacteroidetes,2FMQ9@200643|Bacteroidia,22W30@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 LIIFOLDO_00774 435591.BDI_1755 1.68e-232 640.0 COG1446@1|root,COG1446@2|Bacteria,4NF1U@976|Bacteroidetes,2FR1K@200643|Bacteroidia,23045@171551|Porphyromonadaceae 976|Bacteroidetes E Asparaginase iaaA - 3.4.19.5 ko:K13051 - - - - ko00000,ko01000,ko01002 - - - Asparaginase_2 LIIFOLDO_00775 435591.BDI_1754 0.0 882.0 COG1066@1|root,COG1066@2|Bacteria,4NEYA@976|Bacteroidetes,2FMRM@200643|Bacteroidia,22VX3@171551|Porphyromonadaceae 976|Bacteroidetes O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function radA - - ko:K04485 - - - - ko00000,ko03400 - - - AAA_25,ATPase,ChlI LIIFOLDO_00776 435591.BDI_1753 0.0 1059.0 COG2509@1|root,COG2509@2|Bacteria,4NEUQ@976|Bacteroidetes,2FM1G@200643|Bacteroidia,22XCV@171551|Porphyromonadaceae 976|Bacteroidetes S FAD-binding protein - - - ko:K07137 - - - - ko00000 - - - FAD_binding_2,FAD_binding_3,GIDA,HI0933_like,Pyr_redox_2 LIIFOLDO_00777 435591.BDI_1752 1.29e-286 781.0 COG3940@1|root,COG3940@2|Bacteria,4PMUR@976|Bacteroidetes,2FNKX@200643|Bacteroidia,22Z7G@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 43 - - - - - - - - - - - - Glyco_hydro_43 LIIFOLDO_00779 435591.BDI_1751 6.15e-193 535.0 COG0652@1|root,COG0652@2|Bacteria,4NI3Q@976|Bacteroidetes,2FQYV@200643|Bacteroidia,22XZW@171551|Porphyromonadaceae 976|Bacteroidetes M Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD - - 5.2.1.8 ko:K03768 - - - - ko00000,ko01000,ko03110 - - - Pro_isomerase LIIFOLDO_00780 435591.BDI_1750 0.0 1072.0 COG0490@1|root,COG2985@1|root,COG0490@2|Bacteria,COG2985@2|Bacteria,4NEBW@976|Bacteroidetes,2FMDF@200643|Bacteroidia,22W10@171551|Porphyromonadaceae 976|Bacteroidetes P TrkA C-terminal domain protein - - - ko:K07085 - - - - ko00000 2.A.81 - - Asp-Al_Ex,TrkA_C LIIFOLDO_00781 435591.BDI_1749 2.73e-204 565.0 COG1940@1|root,COG1940@2|Bacteria,4NJ71@976|Bacteroidetes,2FQC7@200643|Bacteroidia,22XQB@171551|Porphyromonadaceae 976|Bacteroidetes GK ROK family - - 2.7.1.2 ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 M00001,M00549 R00299,R01600,R01786 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - ROK LIIFOLDO_00782 435591.BDI_1748 5.44e-229 629.0 COG3828@1|root,COG3828@2|Bacteria,4NFMU@976|Bacteroidetes,2FN9Z@200643|Bacteroidia 976|Bacteroidetes S Trehalose utilisation - - - - - - - - - - - - ThuA LIIFOLDO_00783 435591.BDI_1747 0.0 1187.0 COG0514@1|root,COG0514@2|Bacteria,4NEFD@976|Bacteroidetes,2FMT4@200643|Bacteroidia,22VWK@171551|Porphyromonadaceae 976|Bacteroidetes L ATP-dependent DNA helicase RecQ recQ2 - 3.6.4.12 ko:K03654 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03400 - - - DEAD,Helicase_C,RecQ_Zn_bind LIIFOLDO_00784 435591.BDI_1746 0.0 1133.0 COG0608@1|root,COG0608@2|Bacteria,4NDW1@976|Bacteroidetes,2FMH0@200643|Bacteroidia,22WD4@171551|Porphyromonadaceae 976|Bacteroidetes L single-stranded-DNA-specific exonuclease RecJ recJ - - ko:K07462 ko03410,ko03430,ko03440,map03410,map03430,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - DHH,DHHA1 LIIFOLDO_00785 435591.BDI_1745 3.99e-120 343.0 COG0009@1|root,COG0009@2|Bacteria,4NM43@976|Bacteroidetes,2FPW5@200643|Bacteroidia,22XN8@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the SUA5 family rimN - 2.7.7.87 ko:K07566 - - R10463 RC00745 ko00000,ko01000,ko03009,ko03016 - - - Sua5_yciO_yrdC LIIFOLDO_00786 435591.BDI_1744 0.0 918.0 COG2148@1|root,COG2148@2|Bacteria,4NFIA@976|Bacteroidetes,2FMUQ@200643|Bacteroidia,22XDG@171551|Porphyromonadaceae 976|Bacteroidetes M sugar transferase - - - - - - - - - - - - Bac_transf,CoA_binding_3 LIIFOLDO_00787 435591.BDI_1743 0.0 1140.0 COG0038@1|root,COG0517@1|root,COG0038@2|Bacteria,COG0517@2|Bacteria,4NFCF@976|Bacteroidetes,2FNDY@200643|Bacteroidia,22VVX@171551|Porphyromonadaceae 976|Bacteroidetes P Chloride channel protein - - - ko:K03281 - - - - ko00000 2.A.49 - - CBS,Voltage_CLC LIIFOLDO_00788 435591.BDI_1742 1.35e-235 647.0 COG0223@1|root,COG0223@2|Bacteria,4NE8U@976|Bacteroidetes,2FN5I@200643|Bacteroidia,22VZZ@171551|Porphyromonadaceae 976|Bacteroidetes J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus fmt GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 ko:K00604 ko00670,ko00970,map00670,map00970 - R03940 RC00026,RC00165 ko00000,ko00001,ko01000 - - - Formyl_trans_C,Formyl_trans_N LIIFOLDO_00789 435591.BDI_1741 6.46e-83 245.0 COG2832@1|root,COG2832@2|Bacteria,4NS6H@976|Bacteroidetes,2FSGM@200643|Bacteroidia,22YP7@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF454) - - - ko:K09790 - - - - ko00000 - - - DUF454 LIIFOLDO_00790 435591.BDI_1740 0.0 1018.0 COG0753@1|root,COG0753@2|Bacteria,4NFQX@976|Bacteroidetes,2FPG9@200643|Bacteroidia,22W5F@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the catalase family katA - 1.11.1.6 ko:K03781 ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014 M00532 R00009,R00602,R02670 RC00034,RC00767,RC02141,RC02755 ko00000,ko00001,ko00002,ko01000 - - - Catalase,Catalase-rel LIIFOLDO_00793 435591.BDI_1739 5.15e-91 266.0 COG0545@1|root,COG0545@2|Bacteria,4P3V8@976|Bacteroidetes,2FTBJ@200643|Bacteroidia,230A2@171551|Porphyromonadaceae 976|Bacteroidetes O FKBP-type peptidyl-prolyl cis-trans isomerase mip - 5.2.1.8 ko:K01802 - - - - ko00000,ko01000 - - - FKBP_C LIIFOLDO_00794 435591.BDI_1738 0.0 1954.0 COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,2FNAJ@200643|Bacteroidia,22WW7@171551|Porphyromonadaceae 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family bpeF - - ko:K03296 - - - - ko00000 2.A.6.2 - - ACR_tran LIIFOLDO_00795 435591.BDI_1737 4.52e-244 673.0 COG0845@1|root,COG0845@2|Bacteria,4NHV2@976|Bacteroidetes,2FPPF@200643|Bacteroidia,22WZX@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - - - - - - - - - - HlyD_D23 LIIFOLDO_00796 435591.BDI_1736 0.0 905.0 COG1538@1|root,COG1538@2|Bacteria,4NG1P@976|Bacteroidetes,2FMQB@200643|Bacteroidia,22WV8@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane efflux protein - - - - - - - - - - - - OEP LIIFOLDO_00797 435591.BDI_1735 8.12e-100 291.0 COG2839@1|root,COG2839@2|Bacteria,4NNIY@976|Bacteroidetes,2FS52@200643|Bacteroidia,22YAI@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF456) - - - ko:K09793 - - - - ko00000 - - - DUF456 LIIFOLDO_00798 435591.BDI_1734 6.01e-214 590.0 COG1052@1|root,COG1052@2|Bacteria,4NJGJ@976|Bacteroidetes,2FPFB@200643|Bacteroidia,22XF1@171551|Porphyromonadaceae 976|Bacteroidetes CH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - - - - - - - - - - 2-Hacid_dh,2-Hacid_dh_C LIIFOLDO_00799 435591.BDI_1733 0.0 1477.0 COG0280@1|root,COG0281@1|root,COG0280@2|Bacteria,COG0281@2|Bacteria,4NFUJ@976|Bacteroidetes,2FM2T@200643|Bacteroidia,22VZR@171551|Porphyromonadaceae 976|Bacteroidetes C Malic enzyme maeB - 1.1.1.38,1.1.1.40 ko:K00027,ko:K00029 ko00620,ko00710,ko01100,ko01120,ko01200,ko02020,map00620,map00710,map01100,map01120,map01200,map02020 M00169,M00172 R00214,R00216 RC00105 ko00000,ko00001,ko00002,ko01000 - - - Malic_M,PTA_PTB,malic LIIFOLDO_00800 1122931.AUAE01000010_gene4655 0.0 1845.0 COG1629@1|root,COG1629@2|Bacteria,COG4771@2|Bacteria,4NDU8@976|Bacteroidetes,2FMRZ@200643|Bacteroidia,22X4E@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_00801 435591.BDI_3739 3.82e-158 444.0 COG0283@1|root,COG0283@2|Bacteria,4NEMB@976|Bacteroidetes,2FM71@200643|Bacteroidia,22X8Z@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the cytidylate kinase family. Type 1 subfamily cmk GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 ko:K00945 ko00240,ko01100,map00240,map01100 M00052 R00158,R00512,R01665 RC00002 ko00000,ko00001,ko00002,ko01000 - - - Cytidylate_kin LIIFOLDO_00802 435591.BDI_3740 2.26e-210 581.0 COG0761@1|root,COG0761@2|Bacteria,4NDUX@976|Bacteroidetes,2FMU7@200643|Bacteroidia,22XB1@171551|Porphyromonadaceae 976|Bacteroidetes IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis ispH - 1.17.7.4 ko:K03527 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05884,R08210 RC01137,RC01487 ko00000,ko00001,ko00002,ko01000 - - - LYTB LIIFOLDO_00803 435591.BDI_3741 2.92e-231 637.0 COG0205@1|root,COG0205@2|Bacteria,4NF8F@976|Bacteroidetes,2FMPI@200643|Bacteroidia,22W6D@171551|Porphyromonadaceae 976|Bacteroidetes G Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis pfkA - 2.7.1.11 ko:K00850 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230 M00001,M00345 R00756,R03236,R03237,R03238,R03239,R04779 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000,ko01009,ko03019 - - - PFK LIIFOLDO_00804 435591.BDI_3742 0.0 1149.0 28KYZ@1|root,2ZAEB@2|Bacteria,4NHBZ@976|Bacteroidetes,2FP4X@200643|Bacteroidia 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - - LIIFOLDO_00805 435591.BDI_3743 0.0 990.0 COG0823@1|root,COG0823@2|Bacteria,4NGH4@976|Bacteroidetes,2FN8G@200643|Bacteroidia 976|Bacteroidetes U WD40-like Beta Propeller Repeat - - - - - - - - - - - - PD40 LIIFOLDO_00806 435591.BDI_3744 8.44e-262 717.0 COG1703@1|root,COG1703@2|Bacteria,4NE7Y@976|Bacteroidetes,2FNHU@200643|Bacteroidia,22XBJ@171551|Porphyromonadaceae 976|Bacteroidetes E LAO AO transport system ATPase argK - - ko:K07588 - - - - ko00000,ko01000 - - - ArgK LIIFOLDO_00807 435591.BDI_3745 8.47e-264 723.0 2CG1Y@1|root,2Z9QX@2|Bacteria,4NJI6@976|Bacteroidetes,2FPRX@200643|Bacteroidia,22XW6@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF1573) - - - - - - - - - - - - DUF1573 LIIFOLDO_00808 435591.BDI_3746 4.9e-83 245.0 2CG1Y@1|root,31NHZ@2|Bacteria,4NQ9Z@976|Bacteroidetes,2FSBR@200643|Bacteroidia,22YJ9@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF1573) - - - - - - - - - - - - DUF1573 LIIFOLDO_00809 435591.BDI_3747 0.0 3695.0 COG2373@1|root,COG2373@2|Bacteria,4NED2@976|Bacteroidetes,2FNFE@200643|Bacteroidia,22WEK@171551|Porphyromonadaceae 976|Bacteroidetes S Alpha-2-macroglobulin family - - - - - - - - - - - - A2M,A2M_N,A2M_N_2,CarbopepD_reg_2,Plug LIIFOLDO_00810 435591.BDI_3748 2.99e-119 340.0 COG0262@1|root,COG0262@2|Bacteria,4NQ2Y@976|Bacteroidetes,2FT42@200643|Bacteroidia,22Y3Q@171551|Porphyromonadaceae 976|Bacteroidetes H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis folA - 1.5.1.3 ko:K00287 ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523 M00126,M00840 R00936,R00937,R00939,R00940,R02235,R02236,R11765 RC00109,RC00110,RC00158 ko00000,ko00001,ko00002,ko01000 - - - 2TM,DHFR_1 LIIFOLDO_00811 445970.ALIPUT_00174 3.93e-60 188.0 COG4696@1|root,COG4696@2|Bacteria,4NNW2@976|Bacteroidetes,2FYDG@200643|Bacteroidia 976|Bacteroidetes S Phosphoribosyl-ATP pyrophosphohydrolase - - - - - - - - - - - - PRA-PH LIIFOLDO_00813 1227453.C444_05066 8.96e-12 77.4 COG0464@1|root,arCOG01308@2157|Archaea,2XVSZ@28890|Euryarchaeota,23RZB@183963|Halobacteria 183963|Halobacteria O COG0464 ATPases of the AAA class ruvB - - - - - - - - - - - AAA LIIFOLDO_00814 1313172.YM304_25950 2.87e-156 463.0 COG1351@1|root,COG1351@2|Bacteria,2HBYZ@201174|Actinobacteria,4CMUK@84992|Acidimicrobiia 84992|Acidimicrobiia F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant - - - - - - - - - - - - Thy1 LIIFOLDO_00815 435591.BDI_3750 2.77e-278 760.0 COG2017@1|root,COG2017@2|Bacteria,4NF5G@976|Bacteroidetes,2FMMZ@200643|Bacteroidia,22X1S@171551|Porphyromonadaceae 976|Bacteroidetes G Converts alpha-aldose to the beta-anomer galM - 5.1.3.3 ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 M00632 R01602,R10619 RC00563 ko00000,ko00001,ko00002,ko01000 - - - Aldose_epim,Glyco_hydro_43 LIIFOLDO_00818 435591.BDI_3758 0.0 1326.0 COG0457@1|root,COG0823@1|root,COG2885@1|root,COG0457@2|Bacteria,COG0823@2|Bacteria,COG2885@2|Bacteria,4NE6G@976|Bacteroidetes,2FPQX@200643|Bacteroidia,22WF4@171551|Porphyromonadaceae 976|Bacteroidetes MU Belongs to the ompA family - - - ko:K03640 - - - - ko00000,ko02000 2.C.1.2 - - CarboxypepD_reg,OmpA,PD40 LIIFOLDO_00819 435591.BDI_3759 1.5e-293 802.0 COG0809@1|root,COG0809@2|Bacteria,4NDZ5@976|Bacteroidetes,2FNJD@200643|Bacteroidia,22X1R@171551|Porphyromonadaceae 976|Bacteroidetes H Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) queA - 2.4.99.17 ko:K07568 - - - - ko00000,ko01000,ko03016 - - - Queuosine_synth LIIFOLDO_00820 435591.BDI_3760 1.1e-259 711.0 COG1193@1|root,COG1193@2|Bacteria,4NNNV@976|Bacteroidetes,2FMM1@200643|Bacteroidia,22VWU@171551|Porphyromonadaceae 976|Bacteroidetes L Domain of unknown function (DUF2027) - - - - - - - - - - - - DUF2027,Smr LIIFOLDO_00821 435591.BDI_3761 1.14e-110 318.0 COG2954@1|root,COG2954@2|Bacteria,4NNGE@976|Bacteroidetes,2FNH1@200643|Bacteroidia,22XW0@171551|Porphyromonadaceae 976|Bacteroidetes S Adenylate cyclase cyaA - 4.6.1.1 ko:K01768 ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213 M00695 R00089,R00434 RC00295 ko00000,ko00001,ko00002,ko01000 - - - CYTH LIIFOLDO_00822 435591.BDI_3762 0.0 1451.0 COG3591@1|root,COG3591@2|Bacteria,4NEAK@976|Bacteroidetes,2FMI1@200643|Bacteroidia,22X40@171551|Porphyromonadaceae 976|Bacteroidetes E peptidase S46 dpp11 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005575,GO:0005576,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008239,GO:0009056,GO:0009986,GO:0009987,GO:0016049,GO:0016787,GO:0019538,GO:0030154,GO:0032502,GO:0033218,GO:0034641,GO:0040007,GO:0042277,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044464,GO:0048468,GO:0048588,GO:0048589,GO:0048856,GO:0048869,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - - - - - - - - - - Peptidase_S46 LIIFOLDO_00823 1122931.AUAE01000005_gene3211 1.87e-26 97.4 28XP8@1|root,2ZJK4@2|Bacteria,4P8M7@976|Bacteroidetes,2FZD5@200643|Bacteroidia,2311C@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00824 435591.BDI_3763 9.21e-142 400.0 COG4185@1|root,COG4185@2|Bacteria,4NNKA@976|Bacteroidetes,2FQ6Z@200643|Bacteroidia,22Y15@171551|Porphyromonadaceae 976|Bacteroidetes S Zeta toxin - - - - - - - - - - - - Zeta_toxin LIIFOLDO_00825 435591.BDI_3764 2.47e-282 770.0 COG0635@1|root,COG0635@2|Bacteria,4NFEE@976|Bacteroidetes,2FPFC@200643|Bacteroidia,22VY4@171551|Porphyromonadaceae 976|Bacteroidetes H Involved in the biosynthesis of porphyrin-containing compound hemN - - - - - - - - - - - HemN_C,Radical_SAM LIIFOLDO_00826 435591.BDI_3765 0.0 1432.0 COG0480@1|root,COG0480@2|Bacteria,4NG4H@976|Bacteroidetes,2FN1G@200643|Bacteroidia,22VW0@171551|Porphyromonadaceae 976|Bacteroidetes J elongation factor G fusA2 - - ko:K02355 - - - - ko00000,ko03012,ko03029 - - - EFG_C,EFG_II,EFG_IV,GTP_EFTU,GTP_EFTU_D2 LIIFOLDO_00827 435591.BDI_3766 2.07e-189 525.0 COG2908@1|root,COG2908@2|Bacteria,4NFD8@976|Bacteroidetes,2FNGY@200643|Bacteroidia,22WMF@171551|Porphyromonadaceae 976|Bacteroidetes S Calcineurin-like phosphoesterase superfamily domain - - - - - - - - - - - - Metallophos,Metallophos_2 LIIFOLDO_00828 435591.BDI_3767 6.1e-276 754.0 COG0707@1|root,COG0707@2|Bacteria,4PKSS@976|Bacteroidetes,2FMCT@200643|Bacteroidia,22WGK@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyl transferase family 1 - - - - - - - - - - - - Glyco_trans_1_3 LIIFOLDO_00829 435591.BDI_3768 0.0 867.0 COG2873@1|root,COG2873@2|Bacteria,4NE27@976|Bacteroidetes,2FMQX@200643|Bacteroidia 976|Bacteroidetes E O-acetylhomoserine aminocarboxypropyltransferase cysteine synthase metZ - 2.5.1.49 ko:K01740,ko:K10764 ko00270,ko00920,ko01100,map00270,map00920,map01100 - R01287,R01288,R04859 RC00020,RC02821,RC02848 ko00000,ko00001,ko01000 - - - Cys_Met_Meta_PP LIIFOLDO_00830 435591.BDI_3769 9.42e-314 855.0 COG0534@1|root,COG0534@2|Bacteria,4NHCU@976|Bacteroidetes,2FMEH@200643|Bacteroidia,22VWJ@171551|Porphyromonadaceae 976|Bacteroidetes V Mate efflux family protein - - - - - - - - - - - - MatE LIIFOLDO_00831 435591.BDI_3770 8.93e-219 602.0 COG1082@1|root,COG1082@2|Bacteria,4NJ3Z@976|Bacteroidetes,2FNWR@200643|Bacteroidia,22XN3@171551|Porphyromonadaceae 976|Bacteroidetes G Xylose isomerase-like TIM barrel - - - - - - - - - - - - AP_endonuc_2 LIIFOLDO_00832 435591.BDI_3771 0.0 1460.0 COG3968@1|root,COG3968@2|Bacteria,4NG2B@976|Bacteroidetes,2FMC9@200643|Bacteroidia,22WEW@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the glutamine synthetase family glnA - 6.3.1.2 ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 - R00253 RC00010,RC02798 ko00000,ko00001,ko01000,ko04147 - - - GSIII_N,Gln-synt_C LIIFOLDO_00833 435591.BDI_3772 0.0 1349.0 COG3808@1|root,COG3808@2|Bacteria,4NF2I@976|Bacteroidetes,2FM7F@200643|Bacteroidia,22WAD@171551|Porphyromonadaceae 976|Bacteroidetes C Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane hppA - 3.6.1.1 ko:K15987 ko00190,map00190 - - - ko00000,ko00001,ko01000 3.A.10.1 - - H_PPase,OmpA LIIFOLDO_00835 435591.BDI_3773 5.09e-201 556.0 COG1752@1|root,COG1752@2|Bacteria,4NERH@976|Bacteroidetes,2FNX7@200643|Bacteroidia,22XKQ@171551|Porphyromonadaceae 976|Bacteroidetes S Phospholipase - - - ko:K07001 - - - - ko00000 - - - Patatin LIIFOLDO_00836 435591.BDI_3774 0.0 1184.0 COG0366@1|root,COG0366@2|Bacteria,4NEVK@976|Bacteroidetes,2FNVI@200643|Bacteroidia,22WSY@171551|Porphyromonadaceae 976|Bacteroidetes G Alpha amylase, catalytic domain protein amyA2 - - - - - - - - - - - Alpha-amylase,tRNA_SAD LIIFOLDO_00837 435591.BDI_3775 2.81e-148 417.0 COG0586@1|root,COG0586@2|Bacteria,4NHQA@976|Bacteroidetes,2G2Z5@200643|Bacteroidia,22XP1@171551|Porphyromonadaceae 976|Bacteroidetes S SNARE associated Golgi protein - - - ko:K03975 - - - - ko00000 - - - SNARE_assoc LIIFOLDO_00838 435591.BDI_0923 0.0 950.0 COG0531@1|root,COG0531@2|Bacteria,4NIQT@976|Bacteroidetes,2FM2G@200643|Bacteroidia,22VW8@171551|Porphyromonadaceae 976|Bacteroidetes E glutamate gamma-aminobutyrate antiporter gadC - - ko:K20265 ko02024,map02024 - - - ko00000,ko00001,ko02000 2.A.3.7.1,2.A.3.7.3 - - AA_permease_2 LIIFOLDO_00839 435591.BDI_0924 1e-167 469.0 2DBQK@1|root,2ZAF5@2|Bacteria,4P1MV@976|Bacteroidetes,2FNSD@200643|Bacteroidia 976|Bacteroidetes P Ion channel - - - - - - - - - - - - Ion_trans_2 LIIFOLDO_00840 435591.BDI_0925 0.0 1878.0 COG0178@1|root,COG0178@2|Bacteria,4NFQU@976|Bacteroidetes,2FNMG@200643|Bacteroidia,22W2F@171551|Porphyromonadaceae 976|Bacteroidetes L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate uvrA2 - - ko:K03701 ko03420,map03420 - - - ko00000,ko00001,ko03400 - - - ABC_tran LIIFOLDO_00841 1235803.C825_04172 1.07e-37 127.0 2FBRV@1|root,343WN@2|Bacteria,4P5W1@976|Bacteroidetes,2FUF0@200643|Bacteroidia,230YW@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00842 435591.BDI_0926 1.41e-136 387.0 COG1739@1|root,COG1739@2|Bacteria,4NF0D@976|Bacteroidetes,2FQHX@200643|Bacteroidia,22WR7@171551|Porphyromonadaceae 976|Bacteroidetes S YigZ family yigZ - - - - - - - - - - - UPF0029 LIIFOLDO_00843 435591.BDI_0927 2.22e-278 762.0 COG0475@1|root,COG0475@2|Bacteria,4NGFZ@976|Bacteroidetes,2FNHH@200643|Bacteroidia,22XGX@171551|Porphyromonadaceae 976|Bacteroidetes P Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - Na_H_Exchanger LIIFOLDO_00844 435591.BDI_0928 0.0 875.0 COG3004@1|root,COG3004@2|Bacteria,4NFC4@976|Bacteroidetes,2FMP4@200643|Bacteroidia,22W9P@171551|Porphyromonadaceae 976|Bacteroidetes P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons nhaA - - ko:K03313 - - - - ko00000,ko02000 2.A.33.1 - - Na_H_antiport_1 LIIFOLDO_00845 435591.BDI_0929 2.32e-39 132.0 COG2261@1|root,COG2261@2|Bacteria,4NUXX@976|Bacteroidetes,2FUM7@200643|Bacteroidia,22YUV@171551|Porphyromonadaceae 976|Bacteroidetes S Transglycosylase associated protein - - - - - - - - - - - - Transgly_assoc LIIFOLDO_00846 435591.BDI_0930 0.0 1207.0 COG0366@1|root,COG0366@2|Bacteria,4NFE4@976|Bacteroidetes,2FQHN@200643|Bacteroidia,2302E@171551|Porphyromonadaceae 976|Bacteroidetes G Alpha amylase, catalytic domain malL - 3.2.1.1,3.2.1.10,5.4.99.16 ko:K01182,ko:K05343 ko00052,ko00500,ko01100,map00052,map00500,map01100 - R00801,R01557,R01718,R01791,R02108,R02112,R06199,R11262 RC00028,RC00059,RC00077,RC00451,RC01816 ko00000,ko00001,ko01000 - GH13 - Alpha-amylase,Malt_amylase_C LIIFOLDO_00847 435591.BDI_0931 0.0 1012.0 COG0366@1|root,COG0366@2|Bacteria,4NHFH@976|Bacteroidetes,2FPT9@200643|Bacteroidia,22WSQ@171551|Porphyromonadaceae 976|Bacteroidetes G Alpha-amylase domain amyS - 3.2.1.1 ko:K01176 ko00500,ko01100,ko04973,map00500,map01100,map04973 - R02108,R02112,R11262 - ko00000,ko00001,ko01000 - GH13 - Alpha-amylase,DUF1939 LIIFOLDO_00848 435591.BDI_0932 0.0 1689.0 COG4953@1|root,COG4953@2|Bacteria,4NEG5@976|Bacteroidetes,2FNUH@200643|Bacteroidia,22W9J@171551|Porphyromonadaceae 976|Bacteroidetes M Penicillin-Binding Protein C-terminus Family pbpC - 2.4.1.129 ko:K05367 ko00550,map00550 - - - ko00000,ko00001,ko01000,ko01003,ko01011 - GT51 - BiPBP_C,Transgly,Transpeptidase LIIFOLDO_00849 435591.BDI_0933 2.37e-104 301.0 2DHRG@1|root,300NQ@2|Bacteria,4PHSC@976|Bacteroidetes,2FTZG@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00850 762968.HMPREF9441_03427 1.08e-214 597.0 COG3943@1|root,COG3943@2|Bacteria,4NEGN@976|Bacteroidetes,2FM81@200643|Bacteroidia 976|Bacteroidetes S Toxin-antitoxin system, toxin component, Fic - - - - - - - - - - - - Virulence_RhuM LIIFOLDO_00851 435591.BDI_0934 0.0 3584.0 COG2373@1|root,COG2373@2|Bacteria,4NEW9@976|Bacteroidetes,2FP6Z@200643|Bacteroidia,22WXY@171551|Porphyromonadaceae 976|Bacteroidetes S Alpha-2-Macroglobulin - - - ko:K06894 - - - - ko00000 - - - A2M,A2M_N,A2M_N_2,MG1,Thiol-ester_cl LIIFOLDO_00852 435591.BDI_0935 3.02e-58 182.0 COG0724@1|root,COG0724@2|Bacteria,4NV5J@976|Bacteroidetes,2G2C1@200643|Bacteroidia,22YJ1@171551|Porphyromonadaceae 976|Bacteroidetes S Pfam:RRM_6 ykfA - - - - - - - - - - - RRM_1 LIIFOLDO_00853 435591.BDI_0936 1.41e-213 590.0 COG0745@1|root,COG0745@2|Bacteria,4NRM0@976|Bacteroidetes,2FQT7@200643|Bacteroidia,230S5@171551|Porphyromonadaceae 976|Bacteroidetes KT Transcriptional regulatory protein, C terminal - - - - - - - - - - - - Trans_reg_C LIIFOLDO_00854 435591.BDI_0937 0.0 1462.0 COG1629@1|root,COG1629@2|Bacteria,4P4MW@976|Bacteroidetes,2G08A@200643|Bacteroidia 976|Bacteroidetes P Outer membrane protein beta-barrel family - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3,Plug LIIFOLDO_00856 435591.BDI_0938 9.51e-47 150.0 2EI53@1|root,33BWF@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - LIIFOLDO_00857 435591.BDI_0939 0.0 1516.0 COG0210@1|root,COG0210@2|Bacteria,4NDWN@976|Bacteroidetes,2FNIM@200643|Bacteroidia,22WFT@171551|Porphyromonadaceae 976|Bacteroidetes L DNA helicase pcrA - 3.6.4.12 ko:K03657 ko03420,ko03430,map03420,map03430 - - - ko00000,ko00001,ko01000,ko03400 - - - UvrD-helicase,UvrD_C LIIFOLDO_00858 435591.BDI_0940 1.16e-291 794.0 COG0019@1|root,COG0019@2|Bacteria,4NEN0@976|Bacteroidetes,2FNN3@200643|Bacteroidia,22X37@171551|Porphyromonadaceae 976|Bacteroidetes E carboxynorspermidine decarboxylase nspC - 4.1.1.96 ko:K13747 ko00330,ko01100,map00330,map01100 - R09081,R09082 RC00299 ko00000,ko00001,ko01000 - - - Orn_Arg_deC_N,Orn_DAP_Arg_deC LIIFOLDO_00860 762982.HMPREF9442_00035 7.77e-33 117.0 COG2026@1|root,COG2026@2|Bacteria,4NW0W@976|Bacteroidetes,2FU53@200643|Bacteroidia 976|Bacteroidetes DJ Psort location Cytoplasmic, score - - - - - - - - - - - - RelE LIIFOLDO_00861 435591.BDI_0941 6.5e-219 605.0 COG0552@1|root,COG0552@2|Bacteria,4NE9Z@976|Bacteroidetes,2FMMT@200643|Bacteroidia,22VZH@171551|Porphyromonadaceae 976|Bacteroidetes U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) ftsY - - ko:K03110 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2,3.A.5.7 - - SRP54,SRP54_N LIIFOLDO_00862 435591.BDI_0942 0.0 872.0 COG0621@1|root,COG0621@2|Bacteria,4NEJK@976|Bacteroidetes,2FMEW@200643|Bacteroidia,22W8G@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 rimO - 2.8.4.4 ko:K14441 - - R10652 RC00003,RC03217 ko00000,ko01000,ko03009 - - - Radical_SAM,TRAM,UPF0004 LIIFOLDO_00863 435591.BDI_0943 4.8e-61 188.0 COG0776@1|root,COG0776@2|Bacteria,4NV7A@976|Bacteroidetes,2FTT5@200643|Bacteroidia,22YSI@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the bacterial histone-like protein family himA - - ko:K03530,ko:K04764 - - - - ko00000,ko03032,ko03036,ko03400 - - - Bac_DNA_binding LIIFOLDO_00864 435591.BDI_0944 8.86e-231 639.0 COG0776@1|root,COG1652@1|root,COG0776@2|Bacteria,COG1652@2|Bacteria,4NQVM@976|Bacteroidetes,2G047@200643|Bacteroidia,22Y7D@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the bacterial histone-like protein family - - - - - - - - - - - - Bac_DNA_binding,LysM LIIFOLDO_00865 435591.BDI_0945 6.55e-226 624.0 COG0714@1|root,COG0714@2|Bacteria,4NDVZ@976|Bacteroidetes,2FMGP@200643|Bacteroidia,22W2U@171551|Porphyromonadaceae 976|Bacteroidetes S ATPase family associated with various cellular activities (AAA) moxR - - ko:K03924 - - - - ko00000,ko01000 - - - AAA_3 LIIFOLDO_00866 435591.BDI_0946 2.62e-204 565.0 COG1721@1|root,COG1721@2|Bacteria,4NE2N@976|Bacteroidetes,2FNSY@200643|Bacteroidia,22WCY@171551|Porphyromonadaceae 976|Bacteroidetes S protein (some members contain a von Willebrand factor type A (vWA) domain) - - - - - - - - - - - - DUF58 LIIFOLDO_00867 435591.BDI_0947 4.32e-241 665.0 COG3088@1|root,COG3088@2|Bacteria,4NGHU@976|Bacteroidetes,2FP8Y@200643|Bacteroidia,22XR6@171551|Porphyromonadaceae 976|Bacteroidetes O Psort location CytoplasmicMembrane, score - - - - - - - - - - - - - LIIFOLDO_00868 435591.BDI_0948 2.52e-217 602.0 COG2304@1|root,COG2304@2|Bacteria,4NDUC@976|Bacteroidetes,2FNXM@200643|Bacteroidia,22XC0@171551|Porphyromonadaceae 976|Bacteroidetes S Von Willebrand factor type A domain batA - - ko:K07114 - - - - ko00000,ko02000 1.A.13.2.2,1.A.13.2.3 - - BatA,VWA LIIFOLDO_00869 435591.BDI_0949 3.55e-234 645.0 COG2304@1|root,COG2304@2|Bacteria,4NF7Y@976|Bacteroidetes,2FN4B@200643|Bacteroidia,22WPY@171551|Porphyromonadaceae 976|Bacteroidetes S Von Willebrand factor type A domain batB - - ko:K07114 - - - - ko00000,ko02000 1.A.13.2.2,1.A.13.2.3 - - BatA,VWA,VWA_2 LIIFOLDO_00870 435591.BDI_0950 6.79e-126 363.0 COG0457@1|root,COG0457@2|Bacteria,4NH2K@976|Bacteroidetes,2FN6E@200643|Bacteroidia,22XZA@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat batC - - - - - - - - - - - TPR_1,TPR_11,TPR_16,TPR_2,TPR_8 LIIFOLDO_00871 435591.BDI_0951 0.0 1157.0 COG0457@1|root,COG0457@2|Bacteria,4NERG@976|Bacteroidetes,2FMK5@200643|Bacteroidia,22X3E@171551|Porphyromonadaceae 976|Bacteroidetes S Oxygen tolerance batD - - - - - - - - - - - BatD,TPR_2 LIIFOLDO_00872 435591.BDI_0952 3.82e-180 501.0 COG0457@1|root,COG3103@1|root,COG0457@2|Bacteria,COG3103@2|Bacteria,4NF5V@976|Bacteroidetes,2FP54@200643|Bacteroidia,22XN2@171551|Porphyromonadaceae 976|Bacteroidetes T Tetratricopeptide repeat batE - - - - - - - - - - - SH3_3,SH3_4,TPR_1,TPR_11,TPR_16,TPR_2 LIIFOLDO_00873 435591.BDI_0953 1.45e-167 468.0 COG0671@1|root,COG0671@2|Bacteria,4NNVQ@976|Bacteroidetes,2FRKS@200643|Bacteroidia,22XWM@171551|Porphyromonadaceae 976|Bacteroidetes I Acid phosphatase homologues - - 3.6.1.27 ko:K19302 ko00550,map00550 - R05627 RC00002 ko00000,ko00001,ko01000,ko01011 - - - PAP2 LIIFOLDO_00874 435591.BDI_0954 1.94e-59 183.0 2CZWI@1|root,32T79@2|Bacteria,4NSNW@976|Bacteroidetes,2FTY4@200643|Bacteroidia,22YDH@171551|Porphyromonadaceae 976|Bacteroidetes S DNA-binding protein - - - - - - - - - - - - - LIIFOLDO_00875 435591.BDI_0955 8.21e-268 733.0 COG0589@1|root,COG0589@2|Bacteria,4NHBB@976|Bacteroidetes,2FPV4@200643|Bacteroidia,22WRT@171551|Porphyromonadaceae 976|Bacteroidetes T Belongs to the universal stress protein A family uspA - - - - - - - - - - - DUF2007,Usp LIIFOLDO_00877 743722.Sph21_4708 4.34e-173 503.0 COG3637@1|root,COG3637@2|Bacteria,4NE4Y@976|Bacteroidetes,1IR0H@117747|Sphingobacteriia 976|Bacteroidetes M PFAM RagB SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_00878 435591.BDI_3129 0.0 1349.0 COG1082@1|root,COG1082@2|Bacteria,4NEWC@976|Bacteroidetes,2FPPH@200643|Bacteroidia,231G9@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl-hydrolase 97 N-terminal - - 3.2.1.20 ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 - R00028,R00801,R00802,R06087,R06088 RC00028,RC00049,RC00077 ko00000,ko00001,ko01000 - GH31 - GH97_C,GH97_N,Glyco_hydro_97 LIIFOLDO_00879 435591.BDI_3130 2.82e-187 520.0 COG2755@1|root,COG2755@2|Bacteria,4NMUB@976|Bacteroidetes,2FQW2@200643|Bacteroidia,22ZWG@171551|Porphyromonadaceae 976|Bacteroidetes E GDSL-like Lipase/Acylhydrolase - - - - - - - - - - - - Lipase_GDSL_2 LIIFOLDO_00881 435591.BDI_3131 4.37e-128 365.0 COG1595@1|root,COG1595@2|Bacteria,4NRYV@976|Bacteroidetes,2G341@200643|Bacteroidia 976|Bacteroidetes K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 LIIFOLDO_00882 435591.BDI_3132 4.73e-229 632.0 COG3712@1|root,COG3712@2|Bacteria,4NNTM@976|Bacteroidetes,2FQW4@200643|Bacteroidia,22Y0G@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR LIIFOLDO_00883 435591.BDI_3133 0.0 2269.0 COG1629@1|root,COG4206@1|root,COG1629@2|Bacteria,COG4206@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec LIIFOLDO_00884 435591.BDI_3134 0.0 1227.0 COG1435@1|root,COG1435@2|Bacteria,4NE0S@976|Bacteroidetes 976|Bacteroidetes F SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_00886 435591.BDI_3136 1.55e-225 621.0 COG4974@1|root,COG4974@2|Bacteria,4P01T@976|Bacteroidetes,2FNQ0@200643|Bacteroidia,22WIY@171551|Porphyromonadaceae 976|Bacteroidetes L COG NOG11942 non supervised orthologous group - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase LIIFOLDO_00887 435591.BDI_2292 2.93e-73 231.0 2BFCP@1|root,3295Z@2|Bacteria,4NTX0@976|Bacteroidetes 976|Bacteroidetes S Domain of unknown function (DUF4469) with IG-like fold - - - - - - - - - - - - DUF4469,HU-DNA_bdg LIIFOLDO_00888 435591.BDI_3138 1.86e-103 355.0 COG4886@1|root,COG4886@2|Bacteria 2|Bacteria S regulation of response to stimulus - - - - - - - - - - - - DUF1570,LRR_4,LRR_5 LIIFOLDO_00889 435591.BDI_3139 0.0 1845.0 COG3250@1|root,COG3250@2|Bacteria,4PKXA@976|Bacteroidetes,2FP7W@200643|Bacteroidia,22ZWK@171551|Porphyromonadaceae 976|Bacteroidetes G Bacterial alpha-L-rhamnosidase C-terminal domain - - 3.2.1.40 ko:K05989 - - - - ko00000,ko01000 - - - Bac_rhamnosid,Bac_rhamnosid6H,Bac_rhamnosid_C,Bac_rhamnosid_N LIIFOLDO_00890 435591.BDI_3140 0.0 1496.0 COG3537@1|root,COG3537@2|Bacteria,4NG15@976|Bacteroidetes,2FQEA@200643|Bacteroidia,23020@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 LIIFOLDO_00891 435591.BDI_3141 7.81e-288 785.0 COG2152@1|root,COG2152@2|Bacteria,4NG7B@976|Bacteroidetes,2FN5N@200643|Bacteroidia,22ZWT@171551|Porphyromonadaceae 976|Bacteroidetes G Pfam:DUF377 - - 3.2.1.197 ko:K21065 - - R11544 RC00049 ko00000,ko01000 - - - Glyco_hydro_130 LIIFOLDO_00892 435591.BDI_3142 0.0 947.0 COG2755@1|root,COG2755@2|Bacteria,4NGZX@976|Bacteroidetes,2G38H@200643|Bacteroidia,22XGZ@171551|Porphyromonadaceae 976|Bacteroidetes E GDSL-like Lipase/Acylhydrolase - - - - - - - - - - - - Lipase_GDSL_2 LIIFOLDO_00893 435591.BDI_3143 0.0 1597.0 COG3537@1|root,COG3537@2|Bacteria,4NDYB@976|Bacteroidetes,2FQUS@200643|Bacteroidia,22XES@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 LIIFOLDO_00894 435591.BDI_3144 0.0 1585.0 COG3537@1|root,COG3537@2|Bacteria,4NIAV@976|Bacteroidetes,2FRSK@200643|Bacteroidia,22ZN7@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 LIIFOLDO_00895 435591.BDI_3145 3.08e-204 564.0 COG0627@1|root,COG0627@2|Bacteria,4NE7D@976|Bacteroidetes,2FM9S@200643|Bacteroidia,22W0W@171551|Porphyromonadaceae 976|Bacteroidetes S Putative esterase - - 3.1.2.12 ko:K01070 ko00680,ko01120,ko01200,map00680,map01120,map01200 - R00527 RC00167,RC00320 ko00000,ko00001,ko01000 - CE1 - Esterase LIIFOLDO_00896 435591.BDI_3146 6.9e-298 812.0 COG0128@1|root,COG0128@2|Bacteria,4NE8T@976|Bacteroidetes,2FNY8@200643|Bacteroidia,22WBG@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate aroA - 2.5.1.19 ko:K00800 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R03460 RC00350 ko00000,ko00001,ko00002,ko01000 - - - EPSP_synthase LIIFOLDO_00897 435591.BDI_3147 1.7e-92 270.0 2BXIZ@1|root,32R1E@2|Bacteria,4NR51@976|Bacteroidetes,2FS62@200643|Bacteroidia,22YG8@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - LIIFOLDO_00898 435591.BDI_3148 4.58e-178 497.0 COG1108@1|root,COG1108@2|Bacteria,4NH3D@976|Bacteroidetes,2FNK0@200643|Bacteroidia,22W1V@171551|Porphyromonadaceae 976|Bacteroidetes P ABC 3 transport family protein znuB - - ko:K02075,ko:K09816 ko02010,map02010 M00242,M00244 - - ko00000,ko00001,ko00002,ko02000 3.A.1.15,3.A.1.15.3,3.A.1.15.5 - - ABC-3 LIIFOLDO_00899 435591.BDI_3149 0.0 1972.0 COG3064@1|root,COG3064@2|Bacteria,4PKSW@976|Bacteroidetes,2G3H6@200643|Bacteroidia,22W8J@171551|Porphyromonadaceae 976|Bacteroidetes M Membrane - - - - - - - - - - - - TPR_16,TPR_6,TPR_8 LIIFOLDO_00900 435591.BDI_3150 1.53e-210 581.0 COG0024@1|root,COG0024@2|Bacteria,4NIMB@976|Bacteroidetes,2FM2H@200643|Bacteroidia,22X18@171551|Porphyromonadaceae 976|Bacteroidetes E Metallopeptidase family M24 map - 3.4.11.18 ko:K01265 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M24 LIIFOLDO_00901 435591.BDI_3151 1.14e-229 634.0 COG0628@1|root,COG0628@2|Bacteria,4NIB3@976|Bacteroidetes,2FPVP@200643|Bacteroidia,22WR3@171551|Porphyromonadaceae 976|Bacteroidetes S AI-2E family transporter - - - - - - - - - - - - AI-2E_transport LIIFOLDO_00902 435591.BDI_3152 4.55e-286 781.0 COG1820@1|root,COG1820@2|Bacteria,4NJ35@976|Bacteroidetes,2FMRP@200643|Bacteroidia,22XJK@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the metallo-dependent hydrolases superfamily. NagA family - - 3.5.1.25 ko:K01443 ko00520,ko01130,map00520,map01130 - R02059 RC00166,RC00300 ko00000,ko00001,ko01000 - - - Amidohydro_1 LIIFOLDO_00903 435591.BDI_3153 0.0 907.0 COG0793@1|root,COG0793@2|Bacteria,4NFKJ@976|Bacteroidetes,2FNZE@200643|Bacteroidia,22Y3M@171551|Porphyromonadaceae 976|Bacteroidetes M Peptidase family S41 - - - - - - - - - - - - PDZ,PDZ_2,Peptidase_S41 LIIFOLDO_00904 435591.BDI_3154 0.0 1030.0 COG1283@1|root,COG1283@2|Bacteria,4NHMY@976|Bacteroidetes,2FMJB@200643|Bacteroidia,22WCR@171551|Porphyromonadaceae 976|Bacteroidetes P Na Pi-cotransporter II-like protein - - - ko:K03324 - - - - ko00000,ko02000 2.A.58.2 - - Na_Pi_cotrans,PhoU LIIFOLDO_00905 435591.BDI_3155 0.0 1110.0 COG0441@1|root,COG0572@1|root,COG0441@2|Bacteria,COG0572@2|Bacteria,4NIHT@976|Bacteroidetes,2FP3D@200643|Bacteroidia,22VXU@171551|Porphyromonadaceae 976|Bacteroidetes FJ ATPase (AAA udk2 - 2.7.1.48 ko:K00876 ko00240,ko00983,ko01100,map00240,map00983,map01100 - R00513,R00516,R00517,R00962,R00964,R00967,R00968,R00970,R01548,R01549,R01880,R02091,R02096,R02097,R02327,R02332,R02371,R02372,R08232 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PRK LIIFOLDO_00906 435591.BDI_0423 0.0 1254.0 COG1086@1|root,COG1086@2|Bacteria,4NERY@976|Bacteroidetes,2FMAA@200643|Bacteroidia,22WNH@171551|Porphyromonadaceae 976|Bacteroidetes GM Polysaccharide biosynthesis protein wbpM - - - - - - - - - - - CoA_binding_3,Polysacc_synt_2 LIIFOLDO_00907 435591.BDI_0422 6.54e-102 295.0 2ESVK@1|root,33KDZ@2|Bacteria,4NZHI@976|Bacteroidetes,2FV4U@200643|Bacteroidia,230TB@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00908 435591.BDI_0421 6.14e-155 435.0 COG0250@1|root,COG0250@2|Bacteria,4P2Q3@976|Bacteroidetes,2FS8W@200643|Bacteroidia 976|Bacteroidetes K Participates in transcription elongation, termination and antitermination - - - - - - - - - - - - NusG LIIFOLDO_00909 435591.BDI_0420 9.95e-215 593.0 COG4974@1|root,COG4974@2|Bacteria,4P2ST@976|Bacteroidetes,2G050@200643|Bacteroidia 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Phage_int_SAM_5,Phage_integrase LIIFOLDO_00910 435591.BDI_0418 0.0 2064.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FWS8@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_00911 435591.BDI_0417 0.0 1004.0 COG0446@1|root,COG0446@2|Bacteria,4NDYU@976|Bacteroidetes,2FRTS@200643|Bacteroidia 976|Bacteroidetes S Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_00912 435591.BDI_0416 0.0 1050.0 COG5476@1|root,COG5476@2|Bacteria,4NG23@976|Bacteroidetes,2FQI1@200643|Bacteroidia,22XG2@171551|Porphyromonadaceae 976|Bacteroidetes S MlrC C-terminus - - - - - - - - - - - - DUF1485,MlrC_C LIIFOLDO_00913 435591.BDI_0415 0.0 2216.0 COG0646@1|root,COG1410@1|root,COG0646@2|Bacteria,COG1410@2|Bacteria,4NFRF@976|Bacteroidetes,2FMI7@200643|Bacteroidia,22WC9@171551|Porphyromonadaceae 976|Bacteroidetes E B12 binding domain metH - 2.1.1.13 ko:K00548 ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230 M00017 R00946,R09365 RC00035,RC00113,RC01241 ko00000,ko00001,ko00002,ko01000 - - - B12-binding,B12-binding_2,Met_synt_B12,Pterin_bind,S-methyl_trans LIIFOLDO_00914 435591.BDI_0414 8.27e-223 615.0 COG0370@1|root,COG0370@2|Bacteria,4NEAC@976|Bacteroidetes,2FR1T@200643|Bacteroidia,22X98@171551|Porphyromonadaceae 976|Bacteroidetes P Nucleoside recognition - - - - - - - - - - - - Gate LIIFOLDO_00915 435591.BDI_0413 1.7e-101 294.0 COG0691@1|root,COG0691@2|Bacteria,4NNJU@976|Bacteroidetes,2FQX0@200643|Bacteroidia,22XVF@171551|Porphyromonadaceae 976|Bacteroidetes O the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA smpB - - ko:K03664 - - - - ko00000 - - - SmpB LIIFOLDO_00916 435591.BDI_0412 6.03e-128 364.0 2DNHM@1|root,32UIZ@2|Bacteria,4NT16@976|Bacteroidetes,2FN7P@200643|Bacteroidia,22YD3@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF1282) - - - - - - - - - - - - DUF1282 LIIFOLDO_00920 435591.BDI_0408 1.99e-298 815.0 COG3147@1|root,COG3147@2|Bacteria,4NR05@976|Bacteroidetes,2FMFP@200643|Bacteroidia,22YH6@171551|Porphyromonadaceae 976|Bacteroidetes S Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl_2 LIIFOLDO_00921 435591.BDI_0407 1.24e-97 285.0 COG1595@1|root,COG1595@2|Bacteria,4NQCH@976|Bacteroidetes,2FSRW@200643|Bacteroidia,22Y21@171551|Porphyromonadaceae 976|Bacteroidetes K Belongs to the sigma-70 factor family. ECF subfamily - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 LIIFOLDO_00922 435591.BDI_0406 7.79e-78 231.0 COG2608@1|root,COG2608@2|Bacteria,4NXR5@976|Bacteroidetes,2FVIB@200643|Bacteroidia,22YWP@171551|Porphyromonadaceae 976|Bacteroidetes P Heavy-metal-associated domain - - - ko:K08364 - - - - ko00000,ko02000 1.A.72.1 - - HMA LIIFOLDO_00923 435591.BDI_0405 0.0 1518.0 COG1629@1|root,COG4771@2|Bacteria,4NE7A@976|Bacteroidetes,2FQ61@200643|Bacteroidia,22X8W@171551|Porphyromonadaceae 976|Bacteroidetes P CarboxypepD_reg-like domain - - - - - - - - - - - - CarbopepD_reg_2,HMA,Plug,TonB_dep_Rec LIIFOLDO_00924 435591.BDI_0404 3.4e-98 285.0 2DSK5@1|root,33GGC@2|Bacteria,4NZ01@976|Bacteroidetes,2FVYA@200643|Bacteroidia,22YZZ@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00925 435591.BDI_0403 0.0 1029.0 COG1649@1|root,COG1649@2|Bacteria,4NHEB@976|Bacteroidetes,2FMZJ@200643|Bacteroidia,22XHM@171551|Porphyromonadaceae 976|Bacteroidetes S Glycosyl hydrolase-like 10 yngK - - - - - - - - - - - GHL10 LIIFOLDO_00926 435591.BDI_0402 1.26e-183 511.0 COG0584@1|root,COG0584@2|Bacteria,4NMGN@976|Bacteroidetes,2FP5M@200643|Bacteroidia,22XX0@171551|Porphyromonadaceae 976|Bacteroidetes C Glycerophosphoryl diester phosphodiesterase family - - 3.1.4.46 ko:K01126 ko00564,map00564 - R01030,R01470 RC00017,RC00425 ko00000,ko00001,ko01000 - - - GDPD LIIFOLDO_00927 435591.BDI_0401 1.69e-230 634.0 COG0492@1|root,COG0492@2|Bacteria,4NEVX@976|Bacteroidetes,2FMNF@200643|Bacteroidia,22WGV@171551|Porphyromonadaceae 976|Bacteroidetes C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family trxB - 1.8.1.9 ko:K00384 ko00450,map00450 - R02016,R03596,R09372 RC00013,RC02518,RC02873 ko00000,ko00001,ko01000 - - - Pyr_redox_2 LIIFOLDO_00928 435591.BDI_0400 1.19e-154 434.0 COG2834@1|root,COG2834@2|Bacteria,4NFGN@976|Bacteroidetes,2FQ63@200643|Bacteroidia,22YN1@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane lipoprotein carrier protein LolA lolA - - ko:K03634 - - - - ko00000 - - - LolA,LolA_2 LIIFOLDO_00929 435591.BDI_0399 0.0 1568.0 COG1674@1|root,COG1674@2|Bacteria,4NE86@976|Bacteroidetes,2FMX0@200643|Bacteroidia,22WU0@171551|Porphyromonadaceae 976|Bacteroidetes D cell division protein FtsK ftsK - - ko:K03466 - - - - ko00000,ko03036 3.A.12 - - FtsK_4TM,FtsK_SpoIIIE,Ftsk_gamma LIIFOLDO_00930 435591.BDI_0398 0.0 1007.0 COG0348@1|root,COG1143@1|root,COG0348@2|Bacteria,COG1143@2|Bacteria,4NHSX@976|Bacteroidetes,2FN5F@200643|Bacteroidia,22W4S@171551|Porphyromonadaceae 976|Bacteroidetes C 4Fe-4S binding domain yccM - - - - - - - - - - - Fer4,Fer4_5,Fer4_7,Fer4_9 LIIFOLDO_00931 435591.BDI_0397 0.0 962.0 COG1453@1|root,COG1453@2|Bacteria,4NGCW@976|Bacteroidetes,2FPG8@200643|Bacteroidia,22WYY@171551|Porphyromonadaceae 976|Bacteroidetes S Aldo/keto reductase family - - - ko:K07079 - - - - ko00000 - - - Aldo_ket_red,Fer4_17 LIIFOLDO_00932 435591.BDI_0396 0.0 960.0 COG1453@1|root,COG1453@2|Bacteria,4NGCW@976|Bacteroidetes,2FPG8@200643|Bacteroidia,22WYY@171551|Porphyromonadaceae 976|Bacteroidetes S Aldo/keto reductase family - - - ko:K07079 - - - - ko00000 - - - Aldo_ket_red,Fer4_17 LIIFOLDO_00933 435591.BDI_0395 0.0 932.0 COG0348@1|root,COG1143@1|root,COG0348@2|Bacteria,COG1143@2|Bacteria,4NHSX@976|Bacteroidetes,2FN5F@200643|Bacteroidia,22W4S@171551|Porphyromonadaceae 976|Bacteroidetes C 4Fe-4S binding domain yccM - - - - - - - - - - - Fer4,Fer4_5,Fer4_7,Fer4_9 LIIFOLDO_00934 435591.BDI_0394 1.18e-122 350.0 2AIA7@1|root,318R1@2|Bacteria,4NQPK@976|Bacteroidetes,2FPYF@200643|Bacteroidia,22Y48@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF5063) - - - - - - - - - - - - DUF5063 LIIFOLDO_00935 435591.BDI_0393 3.48e-134 380.0 COG0349@1|root,COG0349@2|Bacteria,4NP3B@976|Bacteroidetes,2FN2U@200643|Bacteroidia,22XW2@171551|Porphyromonadaceae 976|Bacteroidetes L 3'-5' exonuclease rnd - - - - - - - - - - - DNA_pol_A_exo1 LIIFOLDO_00936 435591.BDI_0392 4.79e-294 801.0 COG1092@1|root,COG1092@2|Bacteria,4NG9S@976|Bacteroidetes,2FN8H@200643|Bacteroidia,22WK0@171551|Porphyromonadaceae 976|Bacteroidetes J SAM-dependent methyltransferase rlmI - 2.1.1.191 ko:K06969 - - - - ko00000,ko01000,ko03009 - - - Methyltrans_SAM LIIFOLDO_00937 435591.BDI_0391 0.0 1095.0 COG3637@1|root,COG3637@2|Bacteria,4NE4Y@976|Bacteroidetes,2FP8W@200643|Bacteroidia 976|Bacteroidetes M SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_00938 435591.BDI_0390 0.0 1837.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia,2324I@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_00940 1235803.C825_05311 1.99e-111 322.0 COG2197@1|root,COG2197@2|Bacteria,4NQX7@976|Bacteroidetes,2FSCK@200643|Bacteroidia,22YFK@171551|Porphyromonadaceae 976|Bacteroidetes KT helix_turn_helix, Lux Regulon - - - - - - - - - - - - GerE LIIFOLDO_00943 1235803.C825_05314 2.34e-220 610.0 COG3723@1|root,COG3723@2|Bacteria,4NNC6@976|Bacteroidetes,2FQNE@200643|Bacteroidia,22ZU5@171551|Porphyromonadaceae 976|Bacteroidetes L RecT family - - - - - - - - - - - - RecT LIIFOLDO_00944 1235803.C825_05315 4.18e-156 453.0 2C72Y@1|root,2ZP5H@2|Bacteria,4NPKJ@976|Bacteroidetes,2FRIN@200643|Bacteroidia,22ZG4@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00946 1235803.C825_05317 6.14e-128 366.0 2EW78@1|root,33PK6@2|Bacteria,4NZXS@976|Bacteroidetes,2FNF7@200643|Bacteroidia,22ZSU@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - DUF3799 LIIFOLDO_00948 1235803.C825_05318 4.31e-86 254.0 2CF43@1|root,33249@2|Bacteria,4NUU3@976|Bacteroidetes,2FT4K@200643|Bacteroidia,230AZ@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00949 1235803.C825_05319 1.12e-118 343.0 2ETMN@1|root,33M5E@2|Bacteria,4NYYS@976|Bacteroidetes,2FTF9@200643|Bacteroidia,230HS@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00950 1235803.C825_05320 1.12e-311 874.0 COG0553@1|root,COG1372@1|root,COG0553@2|Bacteria,COG1372@2|Bacteria,4NG6P@976|Bacteroidetes,2FPNU@200643|Bacteroidia,22ZEC@171551|Porphyromonadaceae 976|Bacteroidetes L SNF2 family N-terminal domain - - - - - - - - - - - - Helicase_C,SNF2_N LIIFOLDO_00952 1235803.C825_05321 1.04e-123 353.0 2F0SA@1|root,33TUH@2|Bacteria,4P2DQ@976|Bacteroidetes,2FSNN@200643|Bacteroidia,2305H@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00956 1347393.HG726021_gene391 9.72e-05 47.8 2EJ7V@1|root,33CZ1@2|Bacteria,4NYK6@976|Bacteroidetes,2FVT1@200643|Bacteroidia,4AU8C@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00957 435591.BDI_0904 9.94e-90 263.0 2DNV9@1|root,32ZB3@2|Bacteria,4NV7Y@976|Bacteroidetes,2FTAS@200643|Bacteroidia,230T2@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00958 435591.BDI_0903 2.84e-75 225.0 2C21S@1|root,342FA@2|Bacteria,4P3YR@976|Bacteroidetes,2FTNG@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - LIIFOLDO_00960 435591.BDI_0901 0.0 2295.0 COG4926@1|root,COG4926@2|Bacteria,4NFC7@976|Bacteroidetes,2FNWJ@200643|Bacteroidia,22YN6@171551|Porphyromonadaceae 976|Bacteroidetes S Phage minor structural protein - - - - - - - - - - - - ILEI LIIFOLDO_00961 457424.BFAG_02775 1.08e-29 111.0 2EXYW@1|root,33R7X@2|Bacteria,4NZT4@976|Bacteroidetes,2FX4U@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00962 435591.BDI_0900 0.0 1025.0 COG3344@1|root,COG3344@2|Bacteria,4NHUA@976|Bacteroidetes,2FPE8@200643|Bacteroidia,2307G@171551|Porphyromonadaceae 976|Bacteroidetes L Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - RVT_1 LIIFOLDO_00963 435591.BDI_0898 0.0 986.0 2ESU6@1|root,33T2Y@2|Bacteria,4P14Z@976|Bacteroidetes,2G1BB@200643|Bacteroidia,22Z6D@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00964 435591.BDI_0897 2.96e-121 352.0 2DUY3@1|root,33SYJ@2|Bacteria,4P0K0@976|Bacteroidetes,2FTCV@200643|Bacteroidia,230KY@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00965 435591.BDI_0896 8.71e-71 224.0 COG3266@1|root,COG3266@2|Bacteria,4P2WP@976|Bacteroidetes,2FS75@200643|Bacteroidia 976|Bacteroidetes S domain, Protein - - - - - - - - - - - - - LIIFOLDO_00966 435591.BDI_0895 2.74e-214 592.0 2DMXZ@1|root,32UBB@2|Bacteria,4NTRT@976|Bacteroidetes,2FSCE@200643|Bacteroidia,2319J@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00967 435591.BDI_0894 4.67e-95 277.0 28ZVV@1|root,2ZMKC@2|Bacteria,4P8GU@976|Bacteroidetes,2FV87@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00968 435591.BDI_0893 0.0 999.0 COG1196@1|root,COG3941@1|root,COG1196@2|Bacteria,COG3941@2|Bacteria,4NF3E@976|Bacteroidetes,2FNYJ@200643|Bacteroidia,22YP9@171551|Porphyromonadaceae 976|Bacteroidetes D Psort location OuterMembrane, score - - - - - - - - - - - - - LIIFOLDO_00969 483216.BACEGG_02777 6.32e-43 147.0 2EDX9@1|root,337S9@2|Bacteria,4NWYC@976|Bacteroidetes,2G1B5@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00970 929562.Emtol_1755 1.54e-16 75.5 2DT0J@1|root,33I67@2|Bacteria,4PA56@976|Bacteroidetes,47SRM@768503|Cytophagia 976|Bacteroidetes K Helix-turn-helix XRE-family like proteins - - - - - - - - - - - - HTH_3 LIIFOLDO_00971 435591.BDI_0540 2.1e-21 86.7 2ED2F@1|root,336ZC@2|Bacteria,4P5HV@976|Bacteroidetes,2FU1I@200643|Bacteroidia 976|Bacteroidetes S Protein of unknown function (DUF2442) - - - - - - - - - - - - DUF2442 LIIFOLDO_00973 1235803.C825_05341 2.41e-89 265.0 2CCAN@1|root,33TUT@2|Bacteria,4P2D3@976|Bacteroidetes,2FSH7@200643|Bacteroidia,230G9@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00974 1235803.C825_05342 1.41e-91 271.0 2F3Z2@1|root,33WQZ@2|Bacteria,4P3MN@976|Bacteroidetes,2FTGZ@200643|Bacteroidia,2311A@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00975 1235803.C825_05343 8.18e-63 194.0 2FC8M@1|root,344CC@2|Bacteria,4P5HZ@976|Bacteroidetes,2FUUI@200643|Bacteroidia,230QR@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00976 1235803.C825_05344 2.75e-78 236.0 2E4M5@1|root,32ZG6@2|Bacteria,4NUWW@976|Bacteroidetes,2FTU0@200643|Bacteroidia,230QB@171551|Porphyromonadaceae 976|Bacteroidetes - - - - 3.1.3.41 ko:K01101 ko00627,ko01120,map00627,map01120 - R03024 RC00151 ko00000,ko00001,ko01000 - - - - LIIFOLDO_00977 1235803.C825_05345 5.47e-43 142.0 28Z33@1|root,2ZKVM@2|Bacteria,4P76E@976|Bacteroidetes,2FV9Z@200643|Bacteroidia,23159@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00978 1121097.JCM15093_3246 1.66e-38 132.0 2FB5K@1|root,343BW@2|Bacteria,4P6AF@976|Bacteroidetes,2FUS7@200643|Bacteroidia,4AS9S@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00979 1121097.JCM15093_3245 2.14e-217 607.0 2DBX2@1|root,2ZBM1@2|Bacteria,4NMXQ@976|Bacteroidetes,2G16B@200643|Bacteroidia,4AVGC@815|Bacteroidaceae 976|Bacteroidetes S Phage major capsid protein E - - - - - - - - - - - - Phage_cap_E LIIFOLDO_00980 1121097.JCM15093_3244 5.48e-76 234.0 2F2I8@1|root,33VFA@2|Bacteria,4P2RD@976|Bacteroidetes,2FT6T@200643|Bacteroidia,4AR9S@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00981 1347393.HG726031_gene3970 1.32e-27 112.0 2F7FJ@1|root,33ZWB@2|Bacteria,4P51V@976|Bacteroidetes,2FTH3@200643|Bacteroidia,4ARJ1@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00982 762968.HMPREF9441_02257 3.01e-24 92.4 2ABIX@1|root,31108@2|Bacteria,4PFNH@976|Bacteroidetes,2FZ8Y@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00985 1077285.AGDG01000027_gene1829 3.85e-72 229.0 COG3617@1|root,COG3645@1|root,COG3617@2|Bacteria,COG3645@2|Bacteria,4NTZP@976|Bacteroidetes,2FQK0@200643|Bacteroidia,4AP1I@815|Bacteroidaceae 976|Bacteroidetes K BRO family, N-terminal domain - - - - - - - - - - - - ANT,Bro-N,Phage_pRha LIIFOLDO_00986 1235803.C825_05350 3.74e-122 370.0 2DKUV@1|root,30E3A@2|Bacteria,4NJAT@976|Bacteroidetes,2FRRQ@200643|Bacteroidia,22YHE@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00987 1121097.JCM15093_3240 5.76e-214 607.0 28P0G@1|root,2ZBX3@2|Bacteria,4NMWY@976|Bacteroidetes,2FRK6@200643|Bacteroidia,4AP2B@815|Bacteroidaceae 976|Bacteroidetes S Phage portal protein, SPP1 Gp6-like - - - - - - - - - - - - Phage_prot_Gp6 LIIFOLDO_00989 484018.BACPLE_00672 1.18e-281 777.0 COG5410@1|root,COG5410@2|Bacteria,4NN30@976|Bacteroidetes,2FM53@200643|Bacteroidia,4AN70@815|Bacteroidaceae 976|Bacteroidetes S domain protein - - - - - - - - - - - - - LIIFOLDO_00990 1235803.C825_05355 7.03e-103 298.0 COG2963@1|root,COG2963@2|Bacteria,4NTDV@976|Bacteroidetes,2FU37@200643|Bacteroidia,230YR@171551|Porphyromonadaceae 976|Bacteroidetes L transposase activity - - - - - - - - - - - - HTH_23 LIIFOLDO_00991 1235803.C825_05356 4.05e-135 383.0 COG0302@1|root,COG0302@2|Bacteria,4NFC2@976|Bacteroidetes,2FMYB@200643|Bacteroidia,22WSJ@171551|Porphyromonadaceae 976|Bacteroidetes F GTP cyclohydrolase 1 - - - - - - - - - - - - GTP_cyclohydroI LIIFOLDO_00992 1235803.C825_05357 7.14e-128 363.0 COG0602@1|root,COG0602@2|Bacteria,4NESC@976|Bacteroidetes,2FPNA@200643|Bacteroidia,22Y8Q@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds queE - 4.3.99.3 ko:K10026 ko00790,ko01100,map00790,map01100 - R10002 RC02989 ko00000,ko00001,ko01000,ko03016 - - - Fer4_12,Fer4_14,Radical_SAM LIIFOLDO_00993 1235803.C825_05358 1.74e-74 223.0 COG0720@1|root,COG0720@2|Bacteria,4NQYM@976|Bacteroidetes,2FSMG@200643|Bacteroidia,22YHS@171551|Porphyromonadaceae 976|Bacteroidetes H 6-pyruvoyl tetrahydropterin synthase - - 4.1.2.50,4.2.3.12 ko:K01737 ko00790,ko01100,map00790,map01100 M00842,M00843 R04286,R09959 RC01117,RC02846,RC02847 ko00000,ko00001,ko00002,ko01000,ko03016 - - - PTPS LIIFOLDO_00994 1235803.C825_05359 1.38e-162 455.0 COG0603@1|root,COG0603@2|Bacteria,4PAJ3@976|Bacteroidetes,2FX3M@200643|Bacteroidia 976|Bacteroidetes F Queuosine biosynthesis protein QueC - - - - - - - - - - - - QueC LIIFOLDO_00995 1235803.C825_05360 4.66e-177 493.0 2BKC5@1|root,32ESM@2|Bacteria,4PAIX@976|Bacteroidetes,2FX36@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00996 1235803.C825_05361 7.1e-106 306.0 2F50U@1|root,33XNG@2|Bacteria,4PN5M@976|Bacteroidetes,2G0RJ@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_00997 1235803.C825_05362 3.26e-101 294.0 2C6KN@1|root,33CID@2|Bacteria,4NW71@976|Bacteroidetes,2FTV3@200643|Bacteroidia,230D2@171551|Porphyromonadaceae 976|Bacteroidetes S VRR-NUC domain - - - - - - - - - - - - VRR_NUC LIIFOLDO_00998 435591.BDI_1480 1.19e-259 711.0 COG1830@1|root,COG1830@2|Bacteria,4NEUM@976|Bacteroidetes,2FKZ7@200643|Bacteroidia,22WU7@171551|Porphyromonadaceae 976|Bacteroidetes G DeoC/LacD family aldolase fbaB - 4.1.2.13 ko:K11645 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00003 R01068,R01070,R01829,R02568 RC00438,RC00439,RC00603,RC00604 ko00000,ko00001,ko00002,ko01000 - - - DeoC LIIFOLDO_00999 435591.BDI_1481 0.0 1455.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,4NHS5@976|Bacteroidetes,2FN1K@200643|Bacteroidia,22WZR@171551|Porphyromonadaceae 976|Bacteroidetes EU peptidase pop - - - - - - - - - - - PD40,Peptidase_S9 LIIFOLDO_01000 435591.BDI_1482 5.37e-107 309.0 COG3087@1|root,COG3087@2|Bacteria,4NU0A@976|Bacteroidetes,2FPJ1@200643|Bacteroidia,22YJR@171551|Porphyromonadaceae 976|Bacteroidetes D cell division - - - - - - - - - - - - SPOR LIIFOLDO_01001 435591.BDI_1483 2.17e-209 578.0 COG0524@1|root,COG0524@2|Bacteria,4NGFK@976|Bacteroidetes,2FN72@200643|Bacteroidia,22WT2@171551|Porphyromonadaceae 976|Bacteroidetes G pfkB family - - 2.7.1.4 ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 - R00760,R00867,R03920 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PfkB LIIFOLDO_01002 435591.BDI_1484 0.0 1751.0 COG0745@1|root,COG1879@1|root,COG2207@1|root,COG5002@1|root,COG0745@2|Bacteria,COG1879@2|Bacteria,COG2207@2|Bacteria,COG5002@2|Bacteria,4P0IA@976|Bacteroidetes,2FWSR@200643|Bacteroidia,22Z9K@171551|Porphyromonadaceae 976|Bacteroidetes T Periplasmic binding proteins and sugar binding domain of LacI family - - - - - - - - - - - - HATPase_c,HTH_18,HTH_AraC,HisKA,Peripla_BP_4,Reg_prop,Response_reg,Y_Y_Y LIIFOLDO_01003 435591.BDI_1485 2.88e-219 604.0 2AHBJ@1|root,317N1@2|Bacteria,4P8TZ@976|Bacteroidetes 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01004 435591.BDI_1486 0.0 978.0 COG1696@1|root,COG1696@2|Bacteria,4NFK5@976|Bacteroidetes,2FM3F@200643|Bacteroidia,22XRD@171551|Porphyromonadaceae 976|Bacteroidetes M MBOAT, membrane-bound O-acyltransferase family - - - - - - - - - - - - MBOAT LIIFOLDO_01005 435591.BDI_1487 9.44e-109 313.0 COG0662@1|root,COG0662@2|Bacteria,4NQUX@976|Bacteroidetes,2FTRK@200643|Bacteroidia,22YJ5@171551|Porphyromonadaceae 976|Bacteroidetes G Cupin 2, conserved barrel domain protein - - - - - - - - - - - - - LIIFOLDO_01006 435591.BDI_1488 4.18e-197 546.0 COG0652@1|root,COG0652@2|Bacteria,4NGT6@976|Bacteroidetes,2FMZ6@200643|Bacteroidia,22XHA@171551|Porphyromonadaceae 976|Bacteroidetes O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides - - 5.2.1.8 ko:K03768 - - - - ko00000,ko01000,ko03110 - - - Pro_isomerase LIIFOLDO_01007 435591.BDI_1489 0.0 1221.0 COG0826@1|root,COG0826@2|Bacteria,4NEX7@976|Bacteroidetes,2FNE7@200643|Bacteroidia,22W2C@171551|Porphyromonadaceae 976|Bacteroidetes O Collagenase prtQ - - ko:K08303 ko05120,map05120 - - - ko00000,ko00001,ko01000,ko01002 - - - DUF3656,Peptidase_U32 LIIFOLDO_01008 435591.BDI_1490 2.5e-233 640.0 COG1897@1|root,COG1897@2|Bacteria,4NEUV@976|Bacteroidetes,2FPRH@200643|Bacteroidia,22WQ6@171551|Porphyromonadaceae 976|Bacteroidetes E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine metAA GO:0003674,GO:0003824,GO:0008374,GO:0008899,GO:0016740,GO:0016746,GO:0016747,GO:0016748,GO:0016750 2.3.1.46 ko:K00651 ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230 M00017 R01777 RC00004,RC00041 ko00000,ko00001,ko00002,ko01000 - - - HTS LIIFOLDO_01009 435591.BDI_2918 4.74e-118 356.0 COG3391@1|root,COG3391@2|Bacteria,4NE7W@976|Bacteroidetes,2FRHE@200643|Bacteroidia 976|Bacteroidetes S 6-bladed beta-propeller - - - - - - - - - - - - DUF5128 LIIFOLDO_01010 435591.BDI_1491 3.45e-313 855.0 COG1538@1|root,COG1538@2|Bacteria,4NDZK@976|Bacteroidetes,2FP6I@200643|Bacteroidia,22WSV@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - ko:K18139,ko:K18300 ko01501,ko02024,map01501,map02024 M00641,M00642,M00643,M00647,M00718,M00768,M00822 - - ko00000,ko00001,ko00002,ko01504,ko02000 1.B.17,2.A.6.2 - - OEP LIIFOLDO_01011 435591.BDI_1492 0.0 1894.0 COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,2FNAJ@200643|Bacteroidia,22W8A@171551|Porphyromonadaceae 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - - - - - - - - - - ACR_tran,OEP LIIFOLDO_01012 435591.BDI_1493 8.02e-258 709.0 COG0845@1|root,COG0845@2|Bacteria,4NIDC@976|Bacteroidetes,2FM7T@200643|Bacteroidia,22WI4@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K03585 ko01501,ko01503,map01501,map01503 M00646,M00647,M00699,M00718 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 2.A.6.2,8.A.1.6 - - HlyD_D23 LIIFOLDO_01013 435591.BDI_1495 1.77e-165 462.0 COG0564@1|root,COG0564@2|Bacteria,4NFS8@976|Bacteroidetes,2FN9G@200643|Bacteroidia,22WC3@171551|Porphyromonadaceae 976|Bacteroidetes J Pseudouridine synthase rluC - 5.4.99.23,5.4.99.28,5.4.99.29 ko:K06177,ko:K06180 - - - - ko00000,ko01000,ko03009,ko03016 - - - PseudoU_synth_2 LIIFOLDO_01014 435591.BDI_1496 2.47e-168 471.0 COG1028@1|root,COG1028@2|Bacteria,4NEAI@976|Bacteroidetes,2FNB4@200643|Bacteroidia,22WN3@171551|Porphyromonadaceae 976|Bacteroidetes IQ reductase fabG - 1.1.1.100 ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 M00083,M00572 R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671 RC00029,RC00117 ko00000,ko00001,ko00002,ko01000,ko01004 - - - adh_short_C2 LIIFOLDO_01015 435591.BDI_1497 7.42e-228 627.0 COG0332@1|root,COG0332@2|Bacteria,4NEWU@976|Bacteroidetes,2FQS4@200643|Bacteroidia,22X1D@171551|Porphyromonadaceae 976|Bacteroidetes I 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal - - 2.3.1.180 ko:K00648 ko00061,ko01100,ko01212,map00061,map01100,map01212 M00082,M00083 R10707 RC00004,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 - - - ACP_syn_III,ACP_syn_III_C LIIFOLDO_01016 435591.BDI_1498 2.85e-135 383.0 COG1309@1|root,COG1309@2|Bacteria,4NNNT@976|Bacteroidetes,2FS2Z@200643|Bacteroidia,22XV6@171551|Porphyromonadaceae 976|Bacteroidetes K tetR family qacR - - - - - - - - - - - TetR_C_5,TetR_N LIIFOLDO_01018 435591.BDI_1500 0.0 1253.0 COG1680@1|root,COG3394@1|root,COG1680@2|Bacteria,COG3394@2|Bacteria,4NEVS@976|Bacteroidetes,2FPYR@200643|Bacteroidia,231TC@171551|Porphyromonadaceae 976|Bacteroidetes V Beta-lactamase - - - - - - - - - - - - Beta-lactamase,YdjC LIIFOLDO_01019 435591.BDI_1501 2.24e-96 280.0 COG2050@1|root,COG2050@2|Bacteria,4NT7R@976|Bacteroidetes,2FXU7@200643|Bacteroidia 976|Bacteroidetes Q Domain of unknown function (DUF4442) - - - - - - - - - - - - 4HBT LIIFOLDO_01020 435591.BDI_1502 5.38e-131 372.0 COG0503@1|root,COG0503@2|Bacteria,4NEP0@976|Bacteroidetes,2FP5S@200643|Bacteroidia,22W2M@171551|Porphyromonadaceae 976|Bacteroidetes F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis xpt - 2.4.2.22 ko:K03816 ko00230,ko01100,ko01110,map00230,map01100,map01110 - R01229,R02142 RC00063,RC00122 ko00000,ko00001,ko01000 - - - Pribosyltran LIIFOLDO_01021 435591.BDI_1503 6.43e-300 820.0 COG2233@1|root,COG2233@2|Bacteria,4NG6D@976|Bacteroidetes,2FMKN@200643|Bacteroidia,22XBV@171551|Porphyromonadaceae 976|Bacteroidetes F Permease family pbuX - - ko:K16345 - - - - ko00000,ko02000 2.A.40.4.2 - - Xan_ur_permease LIIFOLDO_01022 435591.BDI_1504 0.0 1296.0 COG1408@1|root,COG3568@1|root,COG1408@2|Bacteria,COG3568@2|Bacteria,4NEIF@976|Bacteroidetes,2FMWV@200643|Bacteroidia,22XIF@171551|Porphyromonadaceae 976|Bacteroidetes S Endonuclease/Exonuclease/phosphatase family - - - - - - - - - - - - Exo_endo_phos,Metallophos,Pur_ac_phosph_N LIIFOLDO_01023 435591.BDI_1505 7.65e-250 685.0 COG2008@1|root,COG2008@2|Bacteria,4NEIH@976|Bacteroidetes,2FPGW@200643|Bacteroidia,22WFE@171551|Porphyromonadaceae 976|Bacteroidetes E Threonine aldolase ltaE - 4.1.2.48 ko:K01620 ko00260,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map01100,map01110,map01120,map01130,map01230 - R00751,R06171 RC00312,RC00372 ko00000,ko00001,ko01000 - - - Beta_elim_lyase LIIFOLDO_01025 470145.BACCOP_02610 2.29e-09 55.1 2DFVM@1|root,2ZTC1@2|Bacteria,4P8N2@976|Bacteroidetes,2FVG0@200643|Bacteroidia,4AUMR@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01026 435591.BDI_1506 0.0 1104.0 COG2373@1|root,COG2373@2|Bacteria,4NGYZ@976|Bacteroidetes,2G2ZM@200643|Bacteroidia 976|Bacteroidetes S Large extracellular alpha-helical protein - - - - - - - - - - - - - LIIFOLDO_01027 435591.BDI_1507 1.21e-292 797.0 2DK5D@1|root,308MI@2|Bacteria,4PAQY@976|Bacteroidetes,2FYMK@200643|Bacteroidia,2313D@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4249) - - - - - - - - - - - - DUF4249 LIIFOLDO_01028 435591.BDI_1508 0.0 1830.0 COG1629@1|root,COG4771@2|Bacteria,4NF4B@976|Bacteroidetes,2FM7I@200643|Bacteroidia,22XCB@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent receptor plug domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_01029 435591.BDI_1509 1.34e-163 457.0 2E4RS@1|root,32ZKA@2|Bacteria,4NREC@976|Bacteroidetes,2G0K5@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01031 435591.BDI_1511 0.0 1402.0 COG5545@1|root,COG5545@2|Bacteria,4NJ76@976|Bacteroidetes,2G30U@200643|Bacteroidia 976|Bacteroidetes S VirE N-terminal domain - - - - - - - - - - - - DUF3874,VirE,VirE_N LIIFOLDO_01033 435591.BDI_1512 2.37e-37 133.0 COG0776@1|root,COG0776@2|Bacteria,4P3B0@976|Bacteroidetes,2FQZF@200643|Bacteroidia 976|Bacteroidetes L regulation of translation - - - - - - - - - - - - - LIIFOLDO_01034 435591.BDI_2990 1.57e-233 642.0 2DNBI@1|root,32WMS@2|Bacteria,4NU4W@976|Bacteroidetes,2FQV5@200643|Bacteroidia 976|Bacteroidetes S Fimbrillin-like - - - - - - - - - - - - Mfa_like_1 LIIFOLDO_01035 435591.BDI_2989 2.02e-268 735.0 COG4977@1|root,COG4977@2|Bacteria,4NRMC@976|Bacteroidetes,2FSF8@200643|Bacteroidia,22YUH@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix, arabinose operon control protein - - - - - - - - - - - - HTH_18 LIIFOLDO_01036 435591.BDI_2988 9.44e-235 644.0 COG0823@1|root,COG0823@2|Bacteria,4NG4S@976|Bacteroidetes,2FQK8@200643|Bacteroidia,22XUM@171551|Porphyromonadaceae 976|Bacteroidetes U WD40-like Beta Propeller Repeat tolB3 - - - - - - - - - - - PD40 LIIFOLDO_01037 435591.BDI_2987 3.44e-262 718.0 COG0012@1|root,COG0012@2|Bacteria,4NF7N@976|Bacteroidetes,2FMWX@200643|Bacteroidia,22W5D@171551|Porphyromonadaceae 976|Bacteroidetes J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner ychF - - ko:K06942 - - - - ko00000,ko03009 - - - MMR_HSR1,YchF-GTPase_C LIIFOLDO_01038 435591.BDI_2973 6.81e-272 744.0 COG0477@1|root,COG2814@2|Bacteria,4NESW@976|Bacteroidetes,2FM8C@200643|Bacteroidia,22XA6@171551|Porphyromonadaceae 976|Bacteroidetes EGP Major Facilitator Superfamily araJ - - ko:K08156 - - - - ko00000,ko02000 2.A.1.2.14 - - MFS_1,Sugar_tr LIIFOLDO_01039 435591.BDI_2972 0.0 1786.0 COG0258@1|root,COG0749@1|root,COG0258@2|Bacteria,COG0749@2|Bacteria,4NDVA@976|Bacteroidetes,2FM8X@200643|Bacteroidia,22WNP@171551|Porphyromonadaceae 976|Bacteroidetes L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity polA - 2.7.7.7 ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 - R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko01000,ko03032,ko03400 - - - 5_3_exonuc,5_3_exonuc_N,DNA_pol_A,DNA_pol_A_exo1 LIIFOLDO_01040 435591.BDI_2971 1.34e-220 610.0 COG0142@1|root,COG0142@2|Bacteria,4NET2@976|Bacteroidetes,2FMMI@200643|Bacteroidia,22WX7@171551|Porphyromonadaceae 976|Bacteroidetes H Belongs to the FPP GGPP synthase family ispB - 2.5.1.90 ko:K02523 ko00900,ko01110,map00900,map01110 - R09248 RC00279 ko00000,ko00001,ko01000,ko01006 - - - polyprenyl_synt LIIFOLDO_01041 435591.BDI_2970 1.35e-213 591.0 COG0274@1|root,COG0274@2|Bacteria,4NGE3@976|Bacteroidetes,2FMTH@200643|Bacteroidia,22W3Q@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate deoC - 4.1.2.4 ko:K01619 ko00030,map00030 - R01066 RC00436,RC00437 ko00000,ko00001,ko01000 - - - DeoC LIIFOLDO_01042 435591.BDI_2969 3.81e-73 219.0 COG1694@1|root,COG1694@2|Bacteria,4NQ3H@976|Bacteroidetes,2FT28@200643|Bacteroidia,22Y6R@171551|Porphyromonadaceae 976|Bacteroidetes S MazG nucleotide pyrophosphohydrolase domain ypjD - - - - - - - - - - - MazG LIIFOLDO_01043 435591.BDI_2968 2.85e-103 298.0 COG1490@1|root,COG1490@2|Bacteria,4NNFF@976|Bacteroidetes,2FNMW@200643|Bacteroidia,22XWS@171551|Porphyromonadaceae 976|Bacteroidetes J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality dtd GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - ko:K07560 - - - - ko00000,ko01000,ko03016 - - - Tyr_Deacylase LIIFOLDO_01044 435591.BDI_2967 0.0 1187.0 COG0322@1|root,COG0322@2|Bacteria,4NE61@976|Bacteroidetes,2FNW9@200643|Bacteroidia,22W6Y@171551|Porphyromonadaceae 976|Bacteroidetes L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision uvrC GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - ko:K03703 ko03420,map03420 - - - ko00000,ko00001,ko03400 - - - GIY-YIG,HHH_2,HHH_5,UVR,UvrC_HhH_N LIIFOLDO_01045 435591.BDI_2966 0.0 1053.0 COG1001@1|root,COG1001@2|Bacteria,4NFD9@976|Bacteroidetes,2FPPM@200643|Bacteroidia,22W1G@171551|Porphyromonadaceae 976|Bacteroidetes F Adenine deaminase C-terminal domain ade - 3.5.4.2 ko:K01486 ko00230,ko01100,map00230,map01100 - R01244 RC00477 ko00000,ko00001,ko01000 - - - Adenine_deam_C,Amidohydro_1 LIIFOLDO_01046 435591.BDI_2965 0.0 1235.0 COG0445@1|root,COG0445@2|Bacteria,4NFNH@976|Bacteroidetes,2FMA5@200643|Bacteroidia,22WWR@171551|Porphyromonadaceae 976|Bacteroidetes D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 gidA GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - ko:K03495 - - R08701 RC00053,RC00209,RC00870 ko00000,ko03016,ko03036 - - - GIDA,GIDA_assoc LIIFOLDO_01047 435591.BDI_2964 1.92e-287 783.0 COG0639@1|root,COG0639@2|Bacteria,4NME8@976|Bacteroidetes,2FP1Y@200643|Bacteroidia,22Y7U@171551|Porphyromonadaceae 976|Bacteroidetes T Calcineurin-like phosphoesterase - - - - - - - - - - - - Metallophos LIIFOLDO_01048 435591.BDI_2963 2.73e-154 432.0 COG3637@1|root,COG3637@2|Bacteria,4NR9K@976|Bacteroidetes,2FU05@200643|Bacteroidia 976|Bacteroidetes M Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl,OMP_b-brl_2 LIIFOLDO_01050 435591.BDI_2962 3.16e-190 528.0 28HAW@1|root,2Z7N4@2|Bacteria,4NG29@976|Bacteroidetes,2FMFN@200643|Bacteroidia,22WCN@171551|Porphyromonadaceae 976|Bacteroidetes S KilA-N domain - - - - - - - - - - - - KilA-N LIIFOLDO_01051 435591.BDI_2961 3.02e-101 293.0 COG0319@1|root,COG0319@2|Bacteria,4NS93@976|Bacteroidetes,2FS5C@200643|Bacteroidia,22XW3@171551|Porphyromonadaceae 976|Bacteroidetes S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA ybeY - - - - - - - - - - - UPF0054 LIIFOLDO_01052 435591.BDI_2960 7.24e-283 774.0 COG0700@1|root,COG2715@1|root,COG0700@2|Bacteria,COG2715@2|Bacteria,4NFUN@976|Bacteroidetes,2FNNY@200643|Bacteroidia,22VV0@171551|Porphyromonadaceae 976|Bacteroidetes S membrane spmA - - ko:K06373 - - - - ko00000 - - - Gate LIIFOLDO_01053 435591.BDI_2959 9.38e-229 630.0 COG1052@1|root,COG1052@2|Bacteria,4PKE3@976|Bacteroidetes,2G31I@200643|Bacteroidia,22WVY@171551|Porphyromonadaceae 976|Bacteroidetes CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family - - 1.1.1.26 ko:K00015 ko00630,ko01100,ko01110,ko01120,map00630,map01100,map01110,map01120 - R00717,R01388 RC00031,RC00042 ko00000,ko00001,ko01000 - - - 2-Hacid_dh,2-Hacid_dh_C LIIFOLDO_01054 435591.BDI_2958 3.24e-169 473.0 COG4912@1|root,COG4912@2|Bacteria,4NKBS@976|Bacteroidetes,2FM3U@200643|Bacteroidia,22XNZ@171551|Porphyromonadaceae 976|Bacteroidetes L DNA alkylation repair - - - - - - - - - - - - DNA_alkylation LIIFOLDO_01055 435591.BDI_2957 5.93e-185 513.0 COG0177@1|root,COG0177@2|Bacteria,4NE7K@976|Bacteroidetes,2FMKR@200643|Bacteroidia,22YCK@171551|Porphyromonadaceae 976|Bacteroidetes L Protein of unknown function (DUF2400) - - - - - - - - - - - - DUF2400 LIIFOLDO_01056 435591.BDI_2956 2.44e-142 401.0 COG1611@1|root,COG1611@2|Bacteria,4NGWU@976|Bacteroidetes,2FNYZ@200643|Bacteroidia,22XPU@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the LOG family yvdD - 3.2.2.10 ko:K06966 ko00230,ko00240,map00230,map00240 - R00182,R00510 RC00063,RC00318 ko00000,ko00001,ko01000 - - - Lysine_decarbox LIIFOLDO_01057 435591.BDI_2955 6.33e-195 541.0 COG0491@1|root,COG0491@2|Bacteria,4NYGS@976|Bacteroidetes,2FV0Q@200643|Bacteroidia,2310G@171551|Porphyromonadaceae 976|Bacteroidetes S Metallo-beta-lactamase superfamily - - - - - - - - - - - - Lactamase_B LIIFOLDO_01059 435591.BDI_2949 3.52e-297 809.0 COG3055@1|root,COG3055@2|Bacteria,4NP3D@976|Bacteroidetes,2FMI0@200643|Bacteroidia 976|Bacteroidetes S Cyclically-permuted mutarotase family protein - - - - - - - - - - - - Kelch_1,Kelch_4 LIIFOLDO_01060 435591.BDI_2948 0.0 1410.0 COG2755@1|root,COG2755@2|Bacteria,4NK31@976|Bacteroidetes,2G3HM@200643|Bacteroidia,22VZS@171551|Porphyromonadaceae 976|Bacteroidetes E Carbohydrate esterase, sialic acid-specific acetylesterase estS - 3.1.1.53 ko:K05970 - - - - ko00000,ko01000 - - - Lipase_GDSL_2,SASA LIIFOLDO_01061 435591.BDI_2947 0.0 1370.0 COG3525@1|root,COG3525@2|Bacteria,4NF9Z@976|Bacteroidetes,2FP2G@200643|Bacteroidia,22XDY@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 20, catalytic domain protein - - - - - - - - - - - - Glyco_hydro_20,Glyco_hydro_20b LIIFOLDO_01062 435591.BDI_2946 0.0 1078.0 COG4409@1|root,COG4409@2|Bacteria,4NFNK@976|Bacteroidetes,2FNCR@200643|Bacteroidia,22WP4@171551|Porphyromonadaceae 976|Bacteroidetes G N-terminal domain of BNR-repeat neuraminidase nanH - 3.2.1.18 ko:K01186 ko00511,ko00600,ko04142,map00511,map00600,map04142 - R04018 RC00028,RC00077 ko00000,ko00001,ko01000,ko02042 - GH33 - BNR_2,BNR_3,BNR_assoc_N LIIFOLDO_01063 435591.BDI_2945 0.0 1068.0 COG0702@1|root,COG0702@2|Bacteria,4NEPE@976|Bacteroidetes,2FMBU@200643|Bacteroidia,231NW@171551|Porphyromonadaceae 976|Bacteroidetes GM Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_01064 435591.BDI_2944 0.0 2177.0 COG4206@1|root,COG4773@1|root,COG4206@2|Bacteria,COG4773@2|Bacteria,4P258@976|Bacteroidetes,2FW53@200643|Bacteroidia,23230@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_01065 435591.BDI_2943 7.29e-307 835.0 COG2271@1|root,COG2271@2|Bacteria,4NFKX@976|Bacteroidetes,2FPKV@200643|Bacteroidia,22WHS@171551|Porphyromonadaceae 976|Bacteroidetes G Major Facilitator Superfamily - - - ko:K08191 - - - - ko00000,ko02000 2.A.1.14.2 - - MFS_1 LIIFOLDO_01066 435591.BDI_2942 1.41e-314 853.0 COG2942@1|root,COG2942@2|Bacteria,4NEFV@976|Bacteroidetes,2FN6V@200643|Bacteroidia,22WNI@171551|Porphyromonadaceae 976|Bacteroidetes G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) nanE - 5.1.3.8 ko:K01787 ko00520,map00520 - R01207 RC00290 ko00000,ko00001,ko01000 - - - GlcNAc_2-epim LIIFOLDO_01067 435591.BDI_2941 6.62e-231 634.0 COG0329@1|root,COG0329@2|Bacteria,4NHBA@976|Bacteroidetes,2FM35@200643|Bacteroidia,22WCK@171551|Porphyromonadaceae 976|Bacteroidetes EM Belongs to the DapA family nanA - 4.1.3.3,4.2.1.41,4.3.3.7 ko:K01639,ko:K01707,ko:K01714 ko00053,ko00261,ko00300,ko00520,ko01100,ko01110,ko01120,ko01130,ko01230,map00053,map00261,map00300,map00520,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R01811,R02279,R10147 RC00159,RC00600,RC00678,RC03062,RC03063 ko00000,ko00001,ko00002,ko01000 - - - DHDPS LIIFOLDO_01068 435591.BDI_1585 1.29e-253 709.0 COG2244@1|root,COG2244@2|Bacteria,4NHVU@976|Bacteroidetes,2FNNQ@200643|Bacteroidia,22VX9@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - - LIIFOLDO_01069 1122931.AUAE01000011_gene1694 5.2e-292 807.0 COG1672@1|root,COG1672@2|Bacteria,4NKJM@976|Bacteroidetes,2FP21@200643|Bacteroidia,2301K@171551|Porphyromonadaceae 976|Bacteroidetes S PD-(D/E)XK nuclease superfamily - - - - - - - - - - - - AAA-ATPase_like,PDDEXK_9 LIIFOLDO_01070 435591.BDI_3816 0.0 1243.0 COG1086@1|root,COG1086@2|Bacteria,4NERY@976|Bacteroidetes,2FMAA@200643|Bacteroidia,22WNH@171551|Porphyromonadaceae 976|Bacteroidetes GM Polysaccharide biosynthesis protein cap5D - - - - - - - - - - - CoA_binding_3,Polysacc_synt_2 LIIFOLDO_01071 435591.BDI_3815 2.51e-90 264.0 2ESVK@1|root,33KDZ@2|Bacteria,4NZHI@976|Bacteroidetes,2FV4U@200643|Bacteroidia,230TB@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01072 435591.BDI_3814 8.1e-262 716.0 COG0250@1|root,COG0250@2|Bacteria,4NJD3@976|Bacteroidetes,2FMZ7@200643|Bacteroidia 976|Bacteroidetes K Participates in transcription elongation, termination and antitermination - - - - - - - - - - - - - LIIFOLDO_01073 435591.BDI_3811 9.27e-220 606.0 COG4974@1|root,COG4974@2|Bacteria,4NZW9@976|Bacteroidetes,2FSE0@200643|Bacteroidia 976|Bacteroidetes L Phage integrase, N-terminal SAM-like domain - - - - - - - - - - - - Phage_int_SAM_5,Phage_integrase LIIFOLDO_01074 435591.BDI_3810 4.64e-83 246.0 2DSC2@1|root,33FFW@2|Bacteria,4NZRV@976|Bacteroidetes,2FVN1@200643|Bacteroidia,2312D@171551|Porphyromonadaceae 976|Bacteroidetes S Putative prokaryotic signal transducing protein - - - - - - - - - - - - DUF2007 LIIFOLDO_01075 1235803.C825_03477 2.65e-28 102.0 2ESUT@1|root,33KD7@2|Bacteria,4NZK5@976|Bacteroidetes,2FUTN@200643|Bacteroidia,22YYH@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01076 435591.BDI_3809 0.0 896.0 COG0334@1|root,COG0334@2|Bacteria,4NEBH@976|Bacteroidetes,2FM43@200643|Bacteroidia,22XFA@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the Glu Leu Phe Val dehydrogenases family gdhA GO:0003674,GO:0003824,GO:0004353,GO:0004354,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016638,GO:0016639,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.4 ko:K00262 ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100 - R00248 RC00006,RC02799 ko00000,ko00001,ko01000 - - - ELFV_dehydrog,ELFV_dehydrog_N LIIFOLDO_01077 435591.BDI_3808 0.0 981.0 COG1660@1|root,COG3178@1|root,COG1660@2|Bacteria,COG3178@2|Bacteria,4NIT0@976|Bacteroidetes,2FMEM@200643|Bacteroidia,22VZD@171551|Porphyromonadaceae 976|Bacteroidetes S Phosphotransferase enzyme family - - - - - - - - - - - - APH,ATP_bind_2 LIIFOLDO_01078 435591.BDI_3807 1.45e-179 499.0 COG1208@1|root,COG1208@2|Bacteria,4NMJ5@976|Bacteroidetes,2FNEE@200643|Bacteroidia,22XKJ@171551|Porphyromonadaceae 976|Bacteroidetes JM COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) hddC - - - - - - - - - - - NTP_transferase LIIFOLDO_01079 435591.BDI_3806 8.73e-262 715.0 COG3021@1|root,COG3021@2|Bacteria,4NHB3@976|Bacteroidetes,2FMQG@200643|Bacteroidia 976|Bacteroidetes S endonuclease exonuclease phosphatase family protein - - - - - - - - - - - - Exo_endo_phos LIIFOLDO_01080 435591.BDI_3805 0.0 1959.0 COG0574@1|root,COG0745@1|root,COG0574@2|Bacteria,COG0745@2|Bacteria,4NGSQ@976|Bacteroidetes,2FM60@200643|Bacteroidia,22W01@171551|Porphyromonadaceae 976|Bacteroidetes GKT Pyruvate phosphate dikinase, PEP pyruvate binding domain ppsA - - - - - - - - - - - PPDK_N,Response_reg LIIFOLDO_01081 435591.BDI_3804 0.0 888.0 COG0334@1|root,COG0334@2|Bacteria,4NEBH@976|Bacteroidetes,2FM43@200643|Bacteroidia,22WFZ@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the Glu Leu Phe Val dehydrogenases family gdh GO:0005575,GO:0005623,GO:0009986,GO:0044464 1.4.1.4 ko:K00262 ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100 - R00248 RC00006,RC02799 ko00000,ko00001,ko01000 - - - ELFV_dehydrog,ELFV_dehydrog_N LIIFOLDO_01082 435591.BDI_3803 7.39e-132 374.0 COG0817@1|root,COG0817@2|Bacteria,4NDV6@976|Bacteroidetes,2FNM6@200643|Bacteroidia,22WG4@171551|Porphyromonadaceae 976|Bacteroidetes L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group ruvC - 3.1.22.4 ko:K01159 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - RuvC LIIFOLDO_01083 435591.BDI_3802 1.37e-70 212.0 2C9BK@1|root,300HS@2|Bacteria,4PHKY@976|Bacteroidetes,2FUT3@200643|Bacteroidia,22YQ9@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4286) - - - - - - - - - - - - DUF4286 LIIFOLDO_01086 435591.BDI_3799 5.46e-98 285.0 2CQRQ@1|root,32SMQ@2|Bacteria,4NTA8@976|Bacteroidetes,2FS5Q@200643|Bacteroidia,22YW9@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - LIIFOLDO_01087 435591.BDI_3798 1.38e-254 697.0 COG0457@1|root,COG0457@2|Bacteria,4NVG7@976|Bacteroidetes,2FM6Q@200643|Bacteroidia,22YEG@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG26558 non supervised orthologous group - - - - - - - - - - - - - LIIFOLDO_01088 435591.BDI_3797 3.22e-211 582.0 COG1082@1|root,COG1082@2|Bacteria,4NIWS@976|Bacteroidetes,2FQ58@200643|Bacteroidia,22WFN@171551|Porphyromonadaceae 976|Bacteroidetes G Xylose isomerase-like TIM barrel - - - - - - - - - - - - AP_endonuc_2,AP_endonuc_2_N LIIFOLDO_01089 435591.BDI_3796 0.0 1257.0 COG0457@1|root,COG0642@1|root,COG0457@2|Bacteria,COG2205@2|Bacteria,4NDXU@976|Bacteroidetes,2FM06@200643|Bacteroidia 976|Bacteroidetes T Psort location CytoplasmicMembrane, score - - - - - - - - - - - - HATPase_c,HisKA,PAS_4,PAS_9,Response_reg LIIFOLDO_01090 435591.BDI_3795 0.0 1777.0 COG0525@1|root,COG0525@2|Bacteria,4NETB@976|Bacteroidetes,2FPJG@200643|Bacteroidia,22VYV@171551|Porphyromonadaceae 976|Bacteroidetes J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner valS GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 ko:K01873 ko00970,map00970 M00359,M00360 R03665 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Anticodon_1,Val_tRNA-synt_C,tRNA-synt_1 LIIFOLDO_01091 435591.BDI_3794 1.13e-217 600.0 COG0564@1|root,COG0564@2|Bacteria,4NHCT@976|Bacteroidetes,2FNNK@200643|Bacteroidia,22W6X@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the pseudouridine synthase RluA family rluD - 5.4.99.23 ko:K06180 - - - - ko00000,ko01000,ko03009 - - - PseudoU_synth_2,S4 LIIFOLDO_01092 435591.BDI_3793 0.0 1342.0 COG4232@1|root,COG4232@2|Bacteria,4NEW6@976|Bacteroidetes,2FNDE@200643|Bacteroidia,22WS5@171551|Porphyromonadaceae 976|Bacteroidetes CO Thiol disulfide interchange protein - - 1.8.1.8 ko:K04084 - - - - ko00000,ko01000,ko03110 5.A.1.1 - - DsbC,DsbD,Thioredoxin_7 LIIFOLDO_01093 435591.BDI_3792 2.06e-187 520.0 COG1694@1|root,COG3956@2|Bacteria,4NEA3@976|Bacteroidetes,2FKYP@200643|Bacteroidia,22WH1@171551|Porphyromonadaceae 976|Bacteroidetes S COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like mazG - 3.6.1.66 ko:K02428 ko00230,map00230 - R00426,R00720,R01855,R02100,R02720,R03531 RC00002 ko00000,ko00001,ko01000 - - - MazG LIIFOLDO_01094 435591.BDI_3791 3.97e-102 296.0 2ER5W@1|root,33IRG@2|Bacteria,4NYCS@976|Bacteroidetes,2FS7R@200643|Bacteroidia,22YNP@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG28735 non supervised orthologous group - - - - - - - - - - - - - LIIFOLDO_01095 435591.BDI_3790 7.06e-74 223.0 2EHRC@1|root,33BH4@2|Bacteria,4NXIE@976|Bacteroidetes,2FTGM@200643|Bacteroidia,22YXC@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG23405 non supervised orthologous group - - - - - - - - - - - - - LIIFOLDO_01097 435591.BDI_3787 0.0 1026.0 COG0459@1|root,COG0459@2|Bacteria,4NDZM@976|Bacteroidetes,2FMH4@200643|Bacteroidia,22WR5@171551|Porphyromonadaceae 976|Bacteroidetes O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions groL GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 - - - ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 - - - Cpn60_TCP1 LIIFOLDO_01098 435591.BDI_3786 2.39e-55 172.0 COG0234@1|root,COG0234@2|Bacteria,4NS7D@976|Bacteroidetes,2FT5R@200643|Bacteroidia,22YDR@171551|Porphyromonadaceae 976|Bacteroidetes O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter groS GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - ko:K04078 - - - - ko00000,ko03029,ko03110 - - - Cpn10 LIIFOLDO_01099 435591.BDI_3785 0.0 983.0 COG5520@1|root,COG5520@2|Bacteria,4NF4C@976|Bacteroidetes,2FNPT@200643|Bacteroidia,22W5A@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the glycosyl hydrolase 30 family - - 3.2.1.45 ko:K01201 ko00511,ko00600,ko01100,ko04142,map00511,map00600,map01100,map04142 - R01498 RC00059,RC00451 ko00000,ko00001,ko01000 - GH30 - Glyco_hydro_30,Glyco_hydro_30C LIIFOLDO_01100 435591.BDI_3784 0.0 878.0 COG0124@1|root,COG0124@2|Bacteria,4NE8N@976|Bacteroidetes,2FM6I@200643|Bacteroidia,22X5W@171551|Porphyromonadaceae 976|Bacteroidetes J histidyl-tRNA synthetase hisS - 6.1.1.21 ko:K01892 ko00970,map00970 M00359,M00360 R03655 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - HGTP_anticodon,tRNA-synt_His LIIFOLDO_01101 435591.BDI_3783 3.96e-155 436.0 COG2738@1|root,COG2738@2|Bacteria,4NDWG@976|Bacteroidetes,2FPBQ@200643|Bacteroidia,22WK7@171551|Porphyromonadaceae 976|Bacteroidetes S Putative neutral zinc metallopeptidase - - - ko:K06973 - - - - ko00000 - - - Zn_peptidase_2 LIIFOLDO_01102 435591.BDI_3782 5e-313 852.0 COG0104@1|root,COG0104@2|Bacteria,4NGRZ@976|Bacteroidetes,2FM8A@200643|Bacteroidia,22VVC@171551|Porphyromonadaceae 976|Bacteroidetes F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP purA GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 M00049 R01135 RC00458,RC00459 ko00000,ko00001,ko00002,ko01000 - - - Adenylsucc_synt LIIFOLDO_01103 435591.BDI_3081 1.11e-203 564.0 COG0803@1|root,COG0803@2|Bacteria,4NGMC@976|Bacteroidetes,2FMQR@200643|Bacteroidia,22XUG@171551|Porphyromonadaceae 976|Bacteroidetes P Zinc-uptake complex component A periplasmic mntA - - ko:K09815,ko:K11707 ko02010,map02010 M00242,M00319 - - ko00000,ko00001,ko00002,ko02000 3.A.1.15,3.A.1.15.3,3.A.1.15.5 - - ZnuA LIIFOLDO_01104 435591.BDI_3080 0.0 877.0 COG1073@1|root,COG1073@2|Bacteria,4NFCA@976|Bacteroidetes,2FP8B@200643|Bacteroidia,22XUE@171551|Porphyromonadaceae 976|Bacteroidetes S PS-10 peptidase S37 - - - - - - - - - - - - Peptidase_S37 LIIFOLDO_01105 435591.BDI_3079 4.53e-224 616.0 COG1600@1|root,COG1600@2|Bacteria,4NFCJ@976|Bacteroidetes,2FPCB@200643|Bacteroidia,22W87@171551|Porphyromonadaceae 976|Bacteroidetes C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) queG - 1.17.99.6 ko:K18979 - - - - ko00000,ko01000,ko03016 - - - DUF1730,Fer4_16 LIIFOLDO_01106 435591.BDI_3078 2.86e-156 437.0 COG0726@1|root,COG0726@2|Bacteria,4NM7D@976|Bacteroidetes,2FMF7@200643|Bacteroidia,22XKK@171551|Porphyromonadaceae 976|Bacteroidetes G polysaccharide deacetylase pgdA_1 - - - - - - - - - - - Polysacc_deac_1 LIIFOLDO_01107 435591.BDI_3077 0.0 2182.0 COG0457@1|root,COG0697@1|root,COG0457@2|Bacteria,COG0697@2|Bacteria,4PKRH@976|Bacteroidetes,2G090@200643|Bacteroidia,23243@171551|Porphyromonadaceae 976|Bacteroidetes EG Protein of unknown function (DUF2723) - - - - - - - - - - - - DUF2723 LIIFOLDO_01108 435591.BDI_3076 7.5e-68 205.0 COG2388@1|root,COG2388@2|Bacteria,4NST0@976|Bacteroidetes,2FT5E@200643|Bacteroidia 976|Bacteroidetes S GCN5-related N-acetyl-transferase - - - ko:K06975 - - - - ko00000 - - - Acetyltransf_CG LIIFOLDO_01109 435591.BDI_3075 2.1e-49 156.0 COG3592@1|root,COG3592@2|Bacteria,4NVG3@976|Bacteroidetes,2FU3F@200643|Bacteroidia 976|Bacteroidetes S Divergent 4Fe-4S mono-cluster - - - - - - - - - - - - Fer4_19,zf-CDGSH LIIFOLDO_01110 435591.BDI_3074 0.0 1867.0 COG0612@1|root,COG0612@2|Bacteria,4NFY0@976|Bacteroidetes,2FMCE@200643|Bacteroidia,22WW4@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the peptidase M16 family - - - ko:K07263 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M16,Peptidase_M16_C LIIFOLDO_01111 435591.BDI_3073 1.35e-207 575.0 COG1284@1|root,COG1284@2|Bacteria,4NG9F@976|Bacteroidetes,2FP2N@200643|Bacteroidia,22WWJ@171551|Porphyromonadaceae 976|Bacteroidetes S membrane - - - - - - - - - - - - DUF2179,YitT_membrane LIIFOLDO_01113 1121011.AUCB01000019_gene3493 4.93e-173 497.0 COG2610@1|root,COG2610@2|Bacteria 2|Bacteria EG gluconate transmembrane transporter activity gntT GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008028,GO:0008150,GO:0008509,GO:0008514,GO:0008643,GO:0015075,GO:0015128,GO:0015144,GO:0015318,GO:0015711,GO:0015718,GO:0015849,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034219,GO:0034220,GO:0035429,GO:0042873,GO:0042879,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098656,GO:1903825,GO:1905039 - ko:K03299 - - - - ko00000,ko02000 2.A.8 - - GntP_permease LIIFOLDO_01114 435591.BDI_3122 1.33e-169 485.0 COG1929@1|root,COG1929@2|Bacteria,4NFK8@976|Bacteroidetes,2FP0A@200643|Bacteroidia,22WR9@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the glycerate kinase type-1 family glxK - 2.7.1.165 ko:K00865 ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130 - R08572 RC00002,RC00428 ko00000,ko00001,ko01000 - - - Gly_kinase LIIFOLDO_01115 1123277.KB893176_gene3714 1.09e-229 645.0 COG1649@1|root,COG1649@2|Bacteria 2|Bacteria F PFAM Uncharacterised BCR, COG1649 - - - - - - - - - - - - PKD,SLH,WD40,WG_beta_rep LIIFOLDO_01116 1123277.KB893176_gene3715 3.34e-250 700.0 COG1649@1|root,COG1649@2|Bacteria 2|Bacteria F PFAM Uncharacterised BCR, COG1649 - - - - - - - - - - - - GHL10,SLH LIIFOLDO_01117 1123277.KB893206_gene3441 8.96e-159 465.0 COG0702@1|root,COG0702@2|Bacteria,4NEDB@976|Bacteroidetes 2|Bacteria GM PFAM RagB SusD - - 1.14.14.47 ko:K00491,ko:K21572 ko00220,ko00330,ko01100,ko01110,map00220,map00330,map01100,map01110 - R11711,R11712,R11713 RC00177,RC00330,RC01044 ko00000,ko00001,ko01000,ko02000 8.A.46.1,8.A.46.3 - - EF-hand_5,FAD_binding_6,Fer2_BFD,NAD_binding_1,NAD_binding_10,NO_synthase,SusD-like_3,SusD_RagB LIIFOLDO_01118 1123277.KB893176_gene3717 0.0 1022.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes 1123277.KB893176_gene3717|- P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - - LIIFOLDO_01119 1168034.FH5T_03370 2.81e-37 142.0 COG3712@1|root,COG3712@2|Bacteria,4NM0I@976|Bacteroidetes,2FR5N@200643|Bacteroidia 976|Bacteroidetes PT COG3712 Fe2 -dicitrate sensor, membrane component - - - - - - - - - - - - DUF4974,FecR LIIFOLDO_01120 471870.BACINT_00052 2.66e-34 127.0 COG1595@1|root,COG1595@2|Bacteria,4NR0P@976|Bacteroidetes,2FSFE@200643|Bacteroidia,4ARXQ@815|Bacteroidaceae 976|Bacteroidetes K RNA polymerase sigma-70 factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 LIIFOLDO_01121 435591.BDI_3071 6.15e-195 540.0 COG4099@1|root,COG4099@2|Bacteria,4NFSH@976|Bacteroidetes,2FNUZ@200643|Bacteroidia,22X53@171551|Porphyromonadaceae 976|Bacteroidetes S Phospholipase/Carboxylesterase - - - - - - - - - - - - Abhydrolase_2,Esterase,Peptidase_S9 LIIFOLDO_01122 435591.BDI_3069 0.0 1259.0 COG3507@1|root,COG3507@2|Bacteria,4NEMG@976|Bacteroidetes,2FPP1@200643|Bacteroidia,22X7R@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 43 - - - - - - - - - - - - F5_F8_type_C,Glyco_hydro_43 LIIFOLDO_01123 435591.BDI_3068 0.0 1508.0 COG1472@1|root,COG1472@2|Bacteria,4NE90@976|Bacteroidetes,2FMCU@200643|Bacteroidia,22WMM@171551|Porphyromonadaceae 976|Bacteroidetes G PFAM Glycosyl hydrolase family 3 C terminal domain bglX - 3.2.1.21 ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 - R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040 RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248 ko00000,ko00001,ko01000 - GH3 - Fn3-like,Glyco_hydro_3,Glyco_hydro_3_C LIIFOLDO_01124 435591.BDI_3067 0.0 1501.0 COG1472@1|root,COG1472@2|Bacteria,4NE90@976|Bacteroidetes,2FMCU@200643|Bacteroidia,22WBP@171551|Porphyromonadaceae 976|Bacteroidetes G Fibronectin type III-like domain - - 3.2.1.21 ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 - R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040 RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248 ko00000,ko00001,ko01000 - GH3 - Fn3-like,Glyco_hydro_3,Glyco_hydro_3_C LIIFOLDO_01125 435591.BDI_3066 0.0 976.0 COG5368@1|root,COG5368@2|Bacteria,4NE34@976|Bacteroidetes,2FM8G@200643|Bacteroidia,22VX0@171551|Porphyromonadaceae 976|Bacteroidetes S Putative glucoamylase - - - - - - - - - - - - Glycoamylase LIIFOLDO_01126 435591.BDI_3065 0.0 1489.0 COG3507@1|root,COG3507@2|Bacteria,4NEMG@976|Bacteroidetes,2FPP1@200643|Bacteroidia,22WTR@171551|Porphyromonadaceae 976|Bacteroidetes G F5 8 type C domain - - - - - - - - - - - - F5_F8_type_C,Glyco_hydro_43,fn3 LIIFOLDO_01127 435591.BDI_3064 0.0 1493.0 COG5368@1|root,COG5368@2|Bacteria,4NE34@976|Bacteroidetes,2FQV0@200643|Bacteroidia,22ZDJ@171551|Porphyromonadaceae 976|Bacteroidetes S Putative glucoamylase - - - - - - - - - - - - Glycoamylase LIIFOLDO_01128 435591.BDI_3063 2.02e-300 826.0 COG0446@1|root,COG0446@2|Bacteria,4NER5@976|Bacteroidetes,2FPRQ@200643|Bacteroidia,22ZDP@171551|Porphyromonadaceae 976|Bacteroidetes S Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_01129 556268.OFAG_00556 8.26e-135 387.0 COG0500@1|root,COG2226@2|Bacteria,1QUKK@1224|Proteobacteria,2VS1Z@28216|Betaproteobacteria 28216|Betaproteobacteria Q ubiE/COQ5 methyltransferase family - - - - - - - - - - - - Methyltransf_25 LIIFOLDO_01130 226186.BT_0758 5.74e-104 303.0 COG3153@1|root,COG3153@2|Bacteria,4NWN0@976|Bacteroidetes,2FSIN@200643|Bacteroidia,4AR8W@815|Bacteroidaceae 976|Bacteroidetes S Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_1,Acetyltransf_9 LIIFOLDO_01132 435591.BDI_3473 0.0 1591.0 COG1629@1|root,COG4771@2|Bacteria,4NEIG@976|Bacteroidetes,2FM1K@200643|Bacteroidia 976|Bacteroidetes P TonB-dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3,Plug LIIFOLDO_01133 435591.BDI_3474 0.0 2623.0 COG0745@1|root,COG2207@1|root,COG3292@1|root,COG5002@1|root,COG0745@2|Bacteria,COG2207@2|Bacteria,COG3292@2|Bacteria,COG5002@2|Bacteria,4P0IA@976|Bacteroidetes,2FWSR@200643|Bacteroidia 976|Bacteroidetes T ATPase histidine kinase DNA gyrase B HSP90 domain protein - - - - - - - - - - - - HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y LIIFOLDO_01134 435591.BDI_3475 0.0 1547.0 COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,2FN9Q@200643|Bacteroidia 976|Bacteroidetes V Efflux ABC transporter, permease protein - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD LIIFOLDO_01135 435591.BDI_3476 2.52e-195 540.0 COG2816@1|root,COG2816@2|Bacteria,4NKCV@976|Bacteroidetes,2FN61@200643|Bacteroidia,22YHY@171551|Porphyromonadaceae 976|Bacteroidetes L NADH pyrophosphatase zinc ribbon domain nudC - 3.6.1.22 ko:K03426 ko00760,ko01100,ko04146,map00760,map01100,map04146 - R00103,R03004,R11104 RC00002 ko00000,ko00001,ko01000 - - - NUDIX,NUDIX-like,zf-NADH-PPase LIIFOLDO_01137 435591.BDI_3478 0.0 884.0 COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,2FMTU@200643|Bacteroidia,22WJK@171551|Porphyromonadaceae 976|Bacteroidetes T Sigma-54 interaction domain - - - - - - - - - - - - HTH_8,Response_reg,Sigma54_activat LIIFOLDO_01138 435591.BDI_3479 3.25e-228 630.0 COG5000@1|root,COG5000@2|Bacteria,4NE49@976|Bacteroidetes,2G2UI@200643|Bacteroidia,231JX@171551|Porphyromonadaceae 976|Bacteroidetes T GHKL domain zraS_1 - - - - - - - - - - - HATPase_c,HisKA LIIFOLDO_01139 435591.BDI_3480 0.0 1738.0 COG0642@1|root,COG0745@1|root,COG2984@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG2984@2|Bacteria,4NE05@976|Bacteroidetes,2FN0Q@200643|Bacteroidia,2323X@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - HATPase_c,HisKA LIIFOLDO_01140 435591.BDI_3481 0.0 1587.0 COG1629@1|root,COG4771@2|Bacteria,4NE4M@976|Bacteroidetes,2FNUY@200643|Bacteroidia,22VV4@171551|Porphyromonadaceae 976|Bacteroidetes P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_01141 435591.BDI_3482 8.43e-162 452.0 COG4121@1|root,COG4121@2|Bacteria,4NE5S@976|Bacteroidetes,2FM5I@200643|Bacteroidia,22XPJ@171551|Porphyromonadaceae 976|Bacteroidetes S S-adenosyl-L-methionine-dependent methyltransferase mnmC - - - - - - - - - - - Methyltransf_30 LIIFOLDO_01142 435591.BDI_3483 2.54e-71 214.0 COG3118@1|root,COG3118@2|Bacteria,4NQ5B@976|Bacteroidetes,2FTV5@200643|Bacteroidia,22YCQ@171551|Porphyromonadaceae 976|Bacteroidetes O Belongs to the thioredoxin family trxA - - ko:K03671 ko04621,ko05418,map04621,map05418 - - - ko00000,ko00001,ko03110 - - - Thioredoxin LIIFOLDO_01143 435591.BDI_3484 0.0 2521.0 COG0587@1|root,COG0587@2|Bacteria,4NFA0@976|Bacteroidetes,2FNND@200643|Bacteroidia,22X3C@171551|Porphyromonadaceae 976|Bacteroidetes L DNA-directed DNA polymerase dnaE - 2.7.7.7 ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_alpha,HHH_6,PHP,RNase_T,tRNA_anti-codon LIIFOLDO_01144 435591.BDI_2562 1.05e-16 94.7 2DUTV@1|root,33S7W@2|Bacteria,4P1VI@976|Bacteroidetes,2FWJJ@200643|Bacteroidia,22ZT0@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01145 435591.BDI_3486 1.3e-151 426.0 COG3637@1|root,COG3637@2|Bacteria,4NRZA@976|Bacteroidetes,2G1FY@200643|Bacteroidia,22YYY@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl,OMP_b-brl_2 LIIFOLDO_01146 435591.BDI_3487 6.97e-109 313.0 COG0102@1|root,COG0102@2|Bacteria,4NNGA@976|Bacteroidetes,2FS3I@200643|Bacteroidia,22XMC@171551|Porphyromonadaceae 976|Bacteroidetes J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly rplM - - ko:K02871 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L13 LIIFOLDO_01147 435591.BDI_3488 7.16e-82 243.0 COG0103@1|root,COG0103@2|Bacteria,4NNN1@976|Bacteroidetes,2FSGZ@200643|Bacteroidia,22XV9@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the universal ribosomal protein uS9 family rpsI - - ko:K02996 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S9 LIIFOLDO_01148 435591.BDI_3489 1.88e-187 522.0 COG0052@1|root,COG0052@2|Bacteria,4NER0@976|Bacteroidetes,2FM4T@200643|Bacteroidia,22WM5@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the universal ribosomal protein uS2 family rpsB - - ko:K02967 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S2 LIIFOLDO_01149 435591.BDI_3490 1.13e-225 623.0 COG0264@1|root,COG0264@2|Bacteria,4NF03@976|Bacteroidetes,2FNAD@200643|Bacteroidia,22W7D@171551|Porphyromonadaceae 976|Bacteroidetes J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome tsf GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - ko:K02357 - - - - ko00000,ko03012,ko03029 - - - EF_TS LIIFOLDO_01150 435591.BDI_3491 5.97e-285 778.0 COG0436@1|root,COG0436@2|Bacteria,4NENS@976|Bacteroidetes,2FMU2@200643|Bacteroidia,22VY5@171551|Porphyromonadaceae 976|Bacteroidetes E Aminotransferase aspC - 2.6.1.1 ko:K00812 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 - R00355,R00694,R00734,R00896,R02433,R02619,R05052 RC00006 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 LIIFOLDO_01151 435591.BDI_3492 7.99e-294 801.0 COG0108@1|root,COG0807@1|root,COG0108@2|Bacteria,COG0807@2|Bacteria,4NF6I@976|Bacteroidetes,2FNS0@200643|Bacteroidia,22WUR@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate ribBA - 3.5.4.25,4.1.99.12 ko:K14652 ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110 M00125,M00840 R00425,R07281 RC00293,RC01792,RC01815,RC02504 ko00000,ko00001,ko00002,ko01000 - - - DHBP_synthase,GTP_cyclohydro2 LIIFOLDO_01152 435591.BDI_3493 0.0 1224.0 COG0795@1|root,COG0795@2|Bacteria,4NE8B@976|Bacteroidetes,2FP6P@200643|Bacteroidia,22XC3@171551|Porphyromonadaceae 976|Bacteroidetes S Permease, YjgP YjgQ family - - - ko:K07091 ko02010,map02010 M00320 - - ko00000,ko00001,ko00002,ko02000 1.B.42.1 - - YjgP_YjgQ LIIFOLDO_01153 435591.BDI_3494 1.29e-88 259.0 COG3832@1|root,COG3832@2|Bacteria,4NNY1@976|Bacteroidetes,2FSYB@200643|Bacteroidia,22YFH@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - AHSA1 LIIFOLDO_01155 435591.BDI_3496 8.52e-216 596.0 2FA05@1|root,347QT@2|Bacteria 2|Bacteria S Fimbrillin-A associated anchor proteins Mfa1 and Mfa2 - - - - - - - - - - - - Mfa2 LIIFOLDO_01156 435591.BDI_1340 4.36e-290 791.0 COG1760@1|root,COG1760@2|Bacteria,4NENR@976|Bacteroidetes,2FMVE@200643|Bacteroidia,22W9U@171551|Porphyromonadaceae 976|Bacteroidetes E Serine dehydratase sdaA - 4.3.1.17 ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 - R00220,R00590 RC00331,RC02600 ko00000,ko00001,ko01000 - - - SDH_alpha,SDH_beta LIIFOLDO_01157 435591.BDI_1339 1.01e-260 712.0 COG3507@1|root,COG3507@2|Bacteria,4NEIZ@976|Bacteroidetes,2G2NY@200643|Bacteroidia,22WFP@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 43 - - - - - - - - - - - - Glyco_hydro_43 LIIFOLDO_01158 435591.BDI_1338 5.67e-141 399.0 COG1309@1|root,COG1309@2|Bacteria,4NIBT@976|Bacteroidetes,2FU2E@200643|Bacteroidia,231CJ@171551|Porphyromonadaceae 976|Bacteroidetes K Bacterial regulatory proteins, tetR family - - - - - - - - - - - - TetR_N LIIFOLDO_01159 435591.BDI_1337 2.72e-299 817.0 COG1538@1|root,COG1538@2|Bacteria,4NFSW@976|Bacteroidetes,2FNYU@200643|Bacteroidia,22WC8@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - - - - - - - - - - OEP LIIFOLDO_01160 435591.BDI_1336 5.49e-205 568.0 COG0845@1|root,COG0845@2|Bacteria,4NGVX@976|Bacteroidetes,2FMBD@200643|Bacteroidia,22WB6@171551|Porphyromonadaceae 976|Bacteroidetes M HlyD family secretion protein - - - ko:K01993 - - - - ko00000 - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 LIIFOLDO_01161 435591.BDI_1335 4.56e-219 604.0 COG1131@1|root,COG1131@2|Bacteria,4NFW9@976|Bacteroidetes,2FWZE@200643|Bacteroidia,22W0S@171551|Porphyromonadaceae 976|Bacteroidetes V ABC transporter - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran LIIFOLDO_01162 1122931.AUAE01000013_gene2164 1.44e-149 423.0 COG1129@1|root,COG1129@2|Bacteria,4PKVD@976|Bacteroidetes,2FM9B@200643|Bacteroidia,22WJ7@171551|Porphyromonadaceae 976|Bacteroidetes G AAA domain, putative AbiEii toxin, Type IV TA system - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran LIIFOLDO_01163 435591.BDI_1333 1.87e-231 640.0 COG0842@1|root,COG0842@2|Bacteria,4NDU0@976|Bacteroidetes,2FMJ3@200643|Bacteroidia,22WTM@171551|Porphyromonadaceae 976|Bacteroidetes V Transport permease protein ybhS - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_3 LIIFOLDO_01164 435591.BDI_1332 1.79e-246 678.0 COG0842@1|root,COG0842@2|Bacteria,4NFM0@976|Bacteroidetes,2FMNV@200643|Bacteroidia,22VXP@171551|Porphyromonadaceae 976|Bacteroidetes V ABC-2 type transporter - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_3 LIIFOLDO_01165 435591.BDI_1331 4.5e-283 777.0 COG2610@1|root,COG2610@2|Bacteria,4NFBD@976|Bacteroidetes,2G1KP@200643|Bacteroidia,22ZS0@171551|Porphyromonadaceae 976|Bacteroidetes EG GntP family permease gntT - - ko:K06155 - - - - ko00000,ko02000 2.A.8.1.4 - - GntP_permease LIIFOLDO_01166 435591.BDI_1330 2.52e-124 353.0 COG0558@1|root,COG0558@2|Bacteria,4NWDJ@976|Bacteroidetes,2FW32@200643|Bacteroidia,2316P@171551|Porphyromonadaceae 976|Bacteroidetes I Domain of unknown function (DUF4833) - - - - - - - - - - - - DUF4833 LIIFOLDO_01167 435591.BDI_1329 7.91e-112 321.0 COG0251@1|root,COG0251@2|Bacteria,4NMAM@976|Bacteroidetes,2FXUF@200643|Bacteroidia 976|Bacteroidetes J YjgF/chorismate_mutase-like, putative endoribonuclease - - - - - - - - - - - - YjgF_endoribonc LIIFOLDO_01168 435591.BDI_1328 6.04e-272 743.0 COG3616@1|root,COG3616@2|Bacteria,4NF5K@976|Bacteroidetes,2FX5F@200643|Bacteroidia 976|Bacteroidetes E Putative serine dehydratase domain - - - - - - - - - - - - Ala_racemase_N,D-ser_dehydrat LIIFOLDO_01169 435591.BDI_1327 4.2e-268 733.0 COG2355@1|root,COG2355@2|Bacteria,4NDYZ@976|Bacteroidetes,2FWCB@200643|Bacteroidia 976|Bacteroidetes E Membrane dipeptidase (Peptidase family M19) - - 3.4.13.19 ko:K01273 - - - - ko00000,ko00537,ko01000,ko01002,ko04147 - - - Peptidase_M19 LIIFOLDO_01170 435591.BDI_1326 0.0 964.0 COG4191@1|root,COG4191@2|Bacteria,4PMUW@976|Bacteroidetes,2G0H8@200643|Bacteroidia,230CI@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase-like ATPases - - - - - - - - - - - - HATPase_c LIIFOLDO_01171 742726.HMPREF9448_02229 4.29e-58 187.0 COG1595@1|root,COG1595@2|Bacteria,4NNU4@976|Bacteroidetes,2FS22@200643|Bacteroidia,22Y62@171551|Porphyromonadaceae 976|Bacteroidetes K COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 LIIFOLDO_01172 1349822.NSB1T_09415 3.11e-81 257.0 COG3712@1|root,COG3712@2|Bacteria,4NN1C@976|Bacteroidetes,2FMQZ@200643|Bacteroidia,22Y05@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR LIIFOLDO_01173 1123277.KB893217_gene4616 0.0 1462.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,47K5R@768503|Cytophagia 976|Bacteroidetes P TIGRFAM TonB-dependent outer membrane receptor, SusC RagA subfamily, signature region - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_01174 1185876.BN8_02744 5.82e-281 785.0 COG0457@1|root,COG0457@2|Bacteria,4NDX0@976|Bacteroidetes,47JEI@768503|Cytophagia 976|Bacteroidetes S SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_01175 1123008.KB905711_gene791 1.88e-115 340.0 COG3568@1|root,COG3568@2|Bacteria,4NHXV@976|Bacteroidetes,2FNR3@200643|Bacteroidia,22W7F@171551|Porphyromonadaceae 976|Bacteroidetes S Endonuclease/Exonuclease/phosphatase family - - - - - - - - - - - - Exo_endo_phos LIIFOLDO_01176 435591.BDI_1324 2.03e-220 607.0 COG4977@1|root,COG4977@2|Bacteria,4P1XK@976|Bacteroidetes,2FMGD@200643|Bacteroidia,22XTF@171551|Porphyromonadaceae 976|Bacteroidetes K AraC-like ligand binding domain - - - - - - - - - - - - AraC_binding,HTH_18 LIIFOLDO_01177 435591.BDI_1323 0.0 955.0 COG1070@1|root,COG1070@2|Bacteria,4NIJC@976|Bacteroidetes,2FP4C@200643|Bacteroidia,22X3Q@171551|Porphyromonadaceae 976|Bacteroidetes G FGGY family of carbohydrate kinases, N-terminal domain rhaB GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0009056,GO:0016052,GO:0019299,GO:0019301,GO:0019318,GO:0019320,GO:0044238,GO:0044281,GO:0044282,GO:0046365,GO:0071704,GO:1901575 2.7.1.5,2.7.1.51 ko:K00848,ko:K00879 ko00040,ko00051,ko01120,map00040,map00051,map01120 - R01902,R03014,R03241 RC00002,RC00017 ko00000,ko00001,ko01000 - - - FGGY_C,FGGY_N LIIFOLDO_01178 435591.BDI_1322 5.19e-313 851.0 COG4806@1|root,COG4806@2|Bacteria,4NHKW@976|Bacteroidetes,2FNVS@200643|Bacteroidia,22W7A@171551|Porphyromonadaceae 976|Bacteroidetes G L-rhamnose isomerase (RhaA) rhaA GO:0003674,GO:0003824,GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0008740,GO:0009056,GO:0016052,GO:0016853,GO:0016860,GO:0016861,GO:0019299,GO:0019301,GO:0019318,GO:0019320,GO:0019321,GO:0019324,GO:0044238,GO:0044281,GO:0044282,GO:0046365,GO:0071704,GO:1901575 5.3.1.14 ko:K01813 ko00051,ko01120,map00051,map01120 - R02437 RC00434 ko00000,ko00001,ko01000 - - - RhaA LIIFOLDO_01179 435591.BDI_1321 2.36e-245 674.0 COG0697@1|root,2Z7ID@2|Bacteria,4NEHB@976|Bacteroidetes,2FN7F@200643|Bacteroidia,22X45@171551|Porphyromonadaceae 976|Bacteroidetes EG L-rhamnose-proton symport protein (RhaT) rhaT - - ko:K02856 - - - - ko00000,ko02000 2.A.7.6 - - RhaT LIIFOLDO_01180 435591.BDI_1320 7.22e-195 540.0 COG0235@1|root,COG0235@2|Bacteria,4NIQK@976|Bacteroidetes,2FN5U@200643|Bacteroidia,22WSD@171551|Porphyromonadaceae 976|Bacteroidetes G Class II Aldolase and Adducin N-terminal domain rhaD GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0009056,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0019321,GO:0019323,GO:0044238,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0071704,GO:1901575 4.1.2.19 ko:K01629 ko00040,ko00051,ko01120,map00040,map00051,map01120 - R01785,R02263 RC00438,RC00599,RC00603,RC00604 ko00000,ko00001,ko01000 - - - Aldolase_II LIIFOLDO_01181 435591.BDI_1319 0.0 1189.0 COG3408@1|root,COG3408@2|Bacteria,4NHST@976|Bacteroidetes,2FQ71@200643|Bacteroidia,22X65@171551|Porphyromonadaceae 976|Bacteroidetes G Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - - - - - - - - - - Bac_rhamnosid6H,Bac_rhamnosid_C LIIFOLDO_01182 435591.BDI_1318 0.0 1777.0 COG3408@1|root,COG3408@2|Bacteria,4NESP@976|Bacteroidetes,2FMGH@200643|Bacteroidia,22X2T@171551|Porphyromonadaceae 976|Bacteroidetes G Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - 3.2.1.40 ko:K05989 - - - - ko00000,ko01000 - - - Bac_rhamnosid,Bac_rhamnosid6H,Bac_rhamnosid_C,Bac_rhamnosid_N LIIFOLDO_01183 435591.BDI_1317 0.0 1499.0 COG3408@1|root,COG3408@2|Bacteria,4NF9P@976|Bacteroidetes,2FMN5@200643|Bacteroidia,22ZGB@171551|Porphyromonadaceae 976|Bacteroidetes G Bacterial alpha-L-rhamnosidase C-terminal domain - - - - - - - - - - - - Bac_rhamnosid6H,Bac_rhamnosid_C,Bac_rhamnosid_N LIIFOLDO_01185 435591.BDI_1315 2.83e-152 427.0 COG0776@1|root,COG0776@2|Bacteria,4P464@976|Bacteroidetes,2FPYE@200643|Bacteroidia,230ZD@171551|Porphyromonadaceae 976|Bacteroidetes L DNA-binding protein - - - - - - - - - - - - Bac_DNA_binding LIIFOLDO_01186 435591.BDI_1663 0.0 1667.0 COG4775@1|root,COG4775@2|Bacteria,4NF9N@976|Bacteroidetes,2FWX4@200643|Bacteroidia,22ZXU@171551|Porphyromonadaceae 976|Bacteroidetes M metallophosphoesterase - - - - - - - - - - - - Bac_surface_Ag,Metallophos,ShlB LIIFOLDO_01189 435591.BDI_1661 0.0 1140.0 COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,2FN9Q@200643|Bacteroidia 976|Bacteroidetes V Efflux ABC transporter, permease protein - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD LIIFOLDO_01190 435591.BDI_1661 1.17e-103 321.0 COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,2FN9Q@200643|Bacteroidia 976|Bacteroidetes V Efflux ABC transporter, permease protein - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD LIIFOLDO_01191 435591.BDI_1660 3.04e-122 348.0 COG0693@1|root,COG0693@2|Bacteria,4NMKV@976|Bacteroidetes,2FM6K@200643|Bacteroidia,22XNE@171551|Porphyromonadaceae 976|Bacteroidetes S DJ-1/PfpI family - - 3.5.1.124 ko:K05520 - - - - ko00000,ko01000,ko01002 - - - DJ-1_PfpI LIIFOLDO_01192 435591.BDI_1659 4.32e-80 237.0 COG1733@1|root,COG1733@2|Bacteria,4NT53@976|Bacteroidetes,2FSMK@200643|Bacteroidia,22Y9M@171551|Porphyromonadaceae 976|Bacteroidetes K HxlR-like helix-turn-helix - - - - - - - - - - - - HxlR LIIFOLDO_01193 435591.BDI_1658 0.0 980.0 28KQC@1|root,2ZA86@2|Bacteria,4PKWK@976|Bacteroidetes,2FMPR@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01194 435591.BDI_1657 2.95e-210 582.0 COG0524@1|root,COG0524@2|Bacteria,4NENQ@976|Bacteroidetes,2FPM3@200643|Bacteroidia,22XY8@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway rbsK - 2.7.1.15 ko:K00852 ko00030,map00030 - R01051,R02750 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PfkB LIIFOLDO_01195 435591.BDI_1656 0.0 1080.0 COG1397@1|root,COG1397@2|Bacteria,4NG36@976|Bacteroidetes,2FNB7@200643|Bacteroidia,22X71@171551|Porphyromonadaceae 976|Bacteroidetes O ADP-ribosylglycohydrolase - - - - - - - - - - - - ADP_ribosyl_GH LIIFOLDO_01196 435591.BDI_1655 2.27e-248 681.0 COG1957@1|root,COG1957@2|Bacteria,4NH09@976|Bacteroidetes,2FRDT@200643|Bacteroidia,230Q0@171551|Porphyromonadaceae 976|Bacteroidetes F Inosine-uridine preferring nucleoside hydrolase - - - - - - - - - - - - IU_nuc_hydro LIIFOLDO_01197 435591.BDI_1654 1.1e-234 646.0 COG4975@1|root,COG4975@2|Bacteria,4NF22@976|Bacteroidetes,2FMYN@200643|Bacteroidia,22X3I@171551|Porphyromonadaceae 976|Bacteroidetes G Sugar transport protein glcU - - ko:K05340 - - - - ko00000,ko02000 2.A.7.5 - - Ureide_permease LIIFOLDO_01198 435591.BDI_1653 6.35e-176 490.0 2B0HH@1|root,31SV0@2|Bacteria,4NRU4@976|Bacteroidetes,2FTFR@200643|Bacteroidia,22Y90@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01199 435591.BDI_1652 4.01e-87 256.0 COG2246@1|root,COG2246@2|Bacteria,4NVF9@976|Bacteroidetes,2FUTU@200643|Bacteroidia,22YT7@171551|Porphyromonadaceae 976|Bacteroidetes S GtrA-like protein - - - - - - - - - - - - GtrA LIIFOLDO_01200 435591.BDI_1651 1.43e-223 616.0 COG0463@1|root,COG0463@2|Bacteria,4NGGM@976|Bacteroidetes,2FMW6@200643|Bacteroidia,22XG6@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyltransferase - - - ko:K20534 - - - - ko00000,ko01000,ko01005,ko02000 4.D.2.1.9 GT2 - Glycos_transf_2 LIIFOLDO_01201 435591.BDI_1650 0.0 912.0 COG0114@1|root,COG0114@2|Bacteria,4NEQP@976|Bacteroidetes,2G0DF@200643|Bacteroidia,231D1@171551|Porphyromonadaceae 976|Bacteroidetes C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate fumC - 4.2.1.2 ko:K01679 ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211 M00009,M00011,M00173,M00376 R01082 RC00443 ko00000,ko00001,ko00002,ko01000 - - - FumaraseC_C,Lyase_1 LIIFOLDO_01202 435591.BDI_1649 0.0 2355.0 COG3408@1|root,COG3408@2|Bacteria,4NESP@976|Bacteroidetes,2FMGH@200643|Bacteroidia,22ZWJ@171551|Porphyromonadaceae 976|Bacteroidetes G Bacterial alpha-L-rhamnosidase C-terminal domain - - 3.2.1.40 ko:K05989 - - - - ko00000,ko01000 - - - Bac_rhamnosid,Bac_rhamnosid6H,Bac_rhamnosid_C,Bac_rhamnosid_N LIIFOLDO_01203 435591.BDI_1648 0.0 915.0 COG3842@1|root,COG3842@2|Bacteria,4NEZ6@976|Bacteroidetes,2G2SA@200643|Bacteroidia,231YA@171551|Porphyromonadaceae 976|Bacteroidetes P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system potA - 3.6.3.29,3.6.3.30,3.6.3.31 ko:K02010,ko:K02017,ko:K10112,ko:K11072 ko02010,map02010 M00189,M00190,M00194,M00196,M00197,M00200,M00201,M00206,M00207,M00299,M00491,M00602,M00605,M00606 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.1,3.A.1.10,3.A.1.11.1,3.A.1.8 - - ABC_tran,TOBE_2 LIIFOLDO_01204 435591.BDI_1647 5.21e-183 509.0 COG1176@1|root,COG1176@2|Bacteria,4P0H6@976|Bacteroidetes,2FN37@200643|Bacteroidia,2301G@171551|Porphyromonadaceae 976|Bacteroidetes P Binding-protein-dependent transport system inner membrane component - - - ko:K11071 ko02010,map02010 M00299 - - ko00000,ko00001,ko00002,ko02000 3.A.1.11.1 - - BPD_transp_1 LIIFOLDO_01205 435591.BDI_1646 2.25e-171 480.0 COG1177@1|root,COG1177@2|Bacteria,4PKVT@976|Bacteroidetes,2FNE3@200643|Bacteroidia,22Z8C@171551|Porphyromonadaceae 976|Bacteroidetes P Binding-protein-dependent transport system inner membrane component ydcV - - ko:K11070 ko02010,map02010 M00299 - - ko00000,ko00001,ko00002,ko02000 3.A.1.11.1 - - BPD_transp_1 LIIFOLDO_01206 435591.BDI_1645 0.0 897.0 COG0687@1|root,COG0687@2|Bacteria,4NHNY@976|Bacteroidetes,2FNDI@200643|Bacteroidia,22ZDA@171551|Porphyromonadaceae 976|Bacteroidetes P Bacterial extracellular solute-binding protein potD - - ko:K11069 ko02010,map02010 M00299 - - ko00000,ko00001,ko00002,ko02000 3.A.1.11.1 - - SBP_bac_8 LIIFOLDO_01207 435591.BDI_1644 1.25e-146 412.0 COG1011@1|root,COG1011@2|Bacteria,4NQT8@976|Bacteroidetes,2FMXN@200643|Bacteroidia,22YFI@171551|Porphyromonadaceae 976|Bacteroidetes S Haloacid dehalogenase-like hydrolase yihX - 3.1.3.10,3.1.3.104 ko:K07025,ko:K20866,ko:K21063 ko00010,ko00740,ko01100,ko01110,ko01120,map00010,map00740,map01100,map01110,map01120 M00125 R00947,R07280 RC00017,RC00078 ko00000,ko00001,ko00002,ko01000 - - - HAD_2 LIIFOLDO_01208 435591.BDI_1643 1.48e-149 422.0 COG1738@1|root,COG1738@2|Bacteria,4NFP3@976|Bacteroidetes,2FM04@200643|Bacteroidia,22X5J@171551|Porphyromonadaceae 976|Bacteroidetes U Involved in the import of queuosine (Q) precursors, required for Q precursor salvage yhhQ - - ko:K09125 - - - - ko00000 - - - Vut_1 LIIFOLDO_01209 435591.BDI_1642 1.08e-141 400.0 2E6TM@1|root,331DG@2|Bacteria,4NYW8@976|Bacteroidetes,2G1IJ@200643|Bacteroidia,22YZI@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF2490) - - - - - - - - - - - - DUF2490 LIIFOLDO_01210 435591.BDI_1641 2.45e-244 671.0 COG3622@1|root,COG3622@2|Bacteria,4NG0V@976|Bacteroidetes,2FSYZ@200643|Bacteroidia,22Z34@171551|Porphyromonadaceae 976|Bacteroidetes G Xylose isomerase-like TIM barrel - - 5.3.1.22 ko:K01816 ko00630,ko01100,map00630,map01100 - R01394 RC00511 ko00000,ko00001,ko01000 - - - AP_endonuc_2 LIIFOLDO_01211 435591.BDI_1640 4.91e-112 322.0 COG1595@1|root,COG1595@2|Bacteria,4NS0S@976|Bacteroidetes,2G2W2@200643|Bacteroidia,231YT@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 LIIFOLDO_01212 435591.BDI_1639 7.44e-121 347.0 2DHXI@1|root,301AS@2|Bacteria,4NNNZ@976|Bacteroidetes,2FUP1@200643|Bacteroidia,23145@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01213 1235803.C825_05263 1.32e-19 87.0 2EYVQ@1|root,33S2T@2|Bacteria,4P0MQ@976|Bacteroidetes,2FQTY@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function (DUF5024) - - - - - - - - - - - - DUF5024 LIIFOLDO_01214 435591.BDI_1637 3.54e-157 441.0 COG1136@1|root,COG1136@2|Bacteria,4NFDW@976|Bacteroidetes,2FMDA@200643|Bacteroidia,22W90@171551|Porphyromonadaceae 976|Bacteroidetes V bacteriocin export ABC transporter, lactococcin 972 group - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran LIIFOLDO_01215 435591.BDI_1636 0.0 1479.0 COG0577@1|root,COG0577@2|Bacteria,4NFGD@976|Bacteroidetes,2FNP6@200643|Bacteroidia,22VZ8@171551|Porphyromonadaceae 976|Bacteroidetes V FtsX-like permease family - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD LIIFOLDO_01216 435591.BDI_1635 0.0 1537.0 COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,2FN9Q@200643|Bacteroidia,22WY9@171551|Porphyromonadaceae 976|Bacteroidetes V FtsX-like permease family - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD LIIFOLDO_01218 435591.BDI_3532 7.72e-99 288.0 COG0779@1|root,COG0779@2|Bacteria,4NQ32@976|Bacteroidetes,2FSM9@200643|Bacteroidia,22Y41@171551|Porphyromonadaceae 976|Bacteroidetes S Required for maturation of 30S ribosomal subunits rimP GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - ko:K09748 - - - - ko00000,ko03009 - - - DUF150,DUF150_C LIIFOLDO_01219 435591.BDI_3533 4.32e-297 811.0 COG0195@1|root,COG0195@2|Bacteria,4NFGA@976|Bacteroidetes,2FNJF@200643|Bacteroidia,22WBR@171551|Porphyromonadaceae 976|Bacteroidetes K Participates in both transcription termination and antitermination nusA - - ko:K02600 - - - - ko00000,ko03009,ko03021 - - - KH_5,NusA_N,S1 LIIFOLDO_01220 435591.BDI_3534 0.0 1644.0 COG0532@1|root,COG0532@2|Bacteria,4NGP3@976|Bacteroidetes,2FM01@200643|Bacteroidia,22VWZ@171551|Porphyromonadaceae 976|Bacteroidetes J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex infB - - ko:K02519 - - - - ko00000,ko03012,ko03029 - - - GTP_EFTU,GTP_EFTU_D2,IF-2,IF2_N LIIFOLDO_01221 435591.BDI_3535 4.07e-107 309.0 COG1286@1|root,COG1286@2|Bacteria,4NW4E@976|Bacteroidetes,2FUQ5@200643|Bacteroidia,22YQ3@171551|Porphyromonadaceae 976|Bacteroidetes S Colicin V production protein - - - ko:K03558 - - - - ko00000 - - - Colicin_V LIIFOLDO_01222 435591.BDI_3536 0.0 958.0 COG0719@1|root,COG0719@2|Bacteria,4NFXH@976|Bacteroidetes,2FMUZ@200643|Bacteroidia,22WAX@171551|Porphyromonadaceae 976|Bacteroidetes O Cysteine desulfurase sufB - - ko:K09014 - - - - ko00000 - - - UPF0051 LIIFOLDO_01223 435591.BDI_3537 5.85e-175 488.0 COG0396@1|root,COG0396@2|Bacteria,4NEMY@976|Bacteroidetes,2FMCD@200643|Bacteroidia,22WQ0@171551|Porphyromonadaceae 976|Bacteroidetes O Part of SUF system involved in inserting iron-sulfur clusters into proteins sufC - - ko:K09013 - - - - ko00000,ko02000 - - - ABC_tran LIIFOLDO_01224 1499967.BAYZ01000170_gene5526 1.64e-38 134.0 COG0614@1|root,COG0614@2|Bacteria 2|Bacteria P abc-type fe3 -hydroxamate transport system, periplasmic component - - - - - - - - - - - - PDDEXK_3 LIIFOLDO_01225 435591.BDI_3538 0.0 884.0 COG0719@1|root,COG0719@2|Bacteria,4NFPG@976|Bacteroidetes,2FNCN@200643|Bacteroidia,22VW3@171551|Porphyromonadaceae 976|Bacteroidetes O FeS assembly protein SufD sufD - - ko:K09015 - - - - ko00000 - - - UPF0051 LIIFOLDO_01226 435591.BDI_3539 2.07e-200 555.0 COG0346@1|root,COG0454@1|root,COG0346@2|Bacteria,COG0456@2|Bacteria,4NQQA@976|Bacteroidetes,2FKZP@200643|Bacteroidia,22YGJ@171551|Porphyromonadaceae 976|Bacteroidetes E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily gloA - 4.4.1.5 ko:K01759,ko:K03827 ko00620,map00620 - R02530 RC00004,RC00740 ko00000,ko00001,ko01000 - - - Acetyltransf_3,Glyoxalase,Glyoxalase_4 LIIFOLDO_01227 435591.BDI_3540 0.0 1273.0 COG0366@1|root,COG0366@2|Bacteria,4NEXF@976|Bacteroidetes,2FMHS@200643|Bacteroidia,22W2Q@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the glycosyl hydrolase 13 family - - 3.2.1.135 ko:K21575 - - - - ko00000,ko01000 - GH13 - Alpha-amylase,Cyc-maltodext_C,Cyc-maltodext_N LIIFOLDO_01228 435591.BDI_3541 0.0 2194.0 COG1501@1|root,COG1501@2|Bacteria,4NE1H@976|Bacteroidetes,2FQU9@200643|Bacteroidia,22W8U@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of unknown function (DUF5110) - - - - - - - - - - - - DUF4968,DUF5110,F5_F8_type_C,Gal_mutarotas_2,Glyco_hydro_31,fn3 LIIFOLDO_01229 435591.BDI_3542 0.0 981.0 COG3119@1|root,COG3119@2|Bacteria,4NEM3@976|Bacteroidetes,2FMG2@200643|Bacteroidia,22WGH@171551|Porphyromonadaceae 976|Bacteroidetes P Sulfatase - - 3.1.6.1 ko:K01130 ko00140,ko00600,map00140,map00600 - R03980,R04856 RC00128,RC00231 ko00000,ko00001,ko01000 - - - Sulfatase LIIFOLDO_01230 435591.BDI_3543 1.14e-297 811.0 COG0520@1|root,COG0520@2|Bacteria,4NDUB@976|Bacteroidetes,2FPF8@200643|Bacteroidia,22WTU@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine sufS - 2.8.1.7,4.4.1.16 ko:K11717 ko00450,ko01100,map00450,map01100 - R03599,R11528 RC00961,RC01789,RC02313 ko00000,ko00001,ko01000 - - - Aminotran_5 LIIFOLDO_01231 435591.BDI_3544 1.18e-79 236.0 COG5652@1|root,COG5652@2|Bacteria,4NXUQ@976|Bacteroidetes,2FSFT@200643|Bacteroidia,22YYX@171551|Porphyromonadaceae 976|Bacteroidetes S VanZ like family fjo27 - - - - - - - - - - - VanZ LIIFOLDO_01232 435591.BDI_3545 2.35e-144 406.0 COG0164@1|root,COG0164@2|Bacteria,4NGVR@976|Bacteroidetes,2FMS7@200643|Bacteroidia,22WJC@171551|Porphyromonadaceae 976|Bacteroidetes L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids rnhB GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 ko:K03470 ko03030,map03030 - - - ko00000,ko00001,ko01000,ko03032 - - - RNase_HII LIIFOLDO_01233 435591.BDI_3546 6.11e-96 279.0 COG2166@1|root,COG2166@2|Bacteria,4NM9N@976|Bacteroidetes,2FSRV@200643|Bacteroidia,22XYC@171551|Porphyromonadaceae 976|Bacteroidetes S Fe-S metabolism sufE - - ko:K02426 - - - - ko00000 - - - SufE LIIFOLDO_01234 435591.BDI_3547 4.94e-245 672.0 COG2234@1|root,COG2234@2|Bacteria,4NG2A@976|Bacteroidetes,2FN1C@200643|Bacteroidia,22X6Y@171551|Porphyromonadaceae 976|Bacteroidetes S Glutamine cyclotransferase - - - - - - - - - - - - Peptidase_M28 LIIFOLDO_01235 435591.BDI_3548 0.0 1231.0 COG2071@1|root,COG2355@1|root,COG2071@2|Bacteria,COG2355@2|Bacteria,4NEBG@976|Bacteroidetes,2FMPY@200643|Bacteroidia,22X2P@171551|Porphyromonadaceae 976|Bacteroidetes E Membrane dipeptidase (Peptidase family M19) - - 3.4.13.19 ko:K01273,ko:K01274 - - - - ko00000,ko00537,ko01000,ko01002,ko04147 - - - Peptidase_C26,Peptidase_M19 LIIFOLDO_01236 435591.BDI_3549 0.0 1184.0 COG2071@1|root,COG2355@1|root,COG2071@2|Bacteria,COG2355@2|Bacteria,4NEBG@976|Bacteroidetes,2FMPY@200643|Bacteroidia,22X2P@171551|Porphyromonadaceae 976|Bacteroidetes E Membrane dipeptidase (Peptidase family M19) - - 3.4.13.19 ko:K01273,ko:K01274 - - - - ko00000,ko00537,ko01000,ko01002,ko04147 - - - Peptidase_C26,Peptidase_M19 LIIFOLDO_01237 435591.BDI_3550 0.0 1285.0 COG0187@1|root,COG0187@2|Bacteria,4NE0P@976|Bacteroidetes,2FPG7@200643|Bacteroidia,22WA1@171551|Porphyromonadaceae 976|Bacteroidetes L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner gyrB - 5.99.1.3 ko:K02470 - - - - ko00000,ko01000,ko03032,ko03400 - - - DNA_gyraseB,DNA_gyraseB_C,HATPase_c,Toprim LIIFOLDO_01239 435591.BDI_3552 8.63e-49 155.0 COG0268@1|root,COG0268@2|Bacteria,4NSB1@976|Bacteroidetes,2FTW4@200643|Bacteroidia,22YCU@171551|Porphyromonadaceae 976|Bacteroidetes J Binds directly to 16S ribosomal RNA rpsT - - ko:K02968 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S20p LIIFOLDO_01241 435591.BDI_3554 7.86e-82 243.0 2CH3Z@1|root,32RP9@2|Bacteria,4NQUA@976|Bacteroidetes,2FS8T@200643|Bacteroidia,22YJ2@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF2721) - - - - - - - - - - - - DUF2721 LIIFOLDO_01242 435591.BDI_3555 7.56e-157 441.0 COG1381@1|root,COG1381@2|Bacteria,4NIBQ@976|Bacteroidetes,2FPGE@200643|Bacteroidia,22XU1@171551|Porphyromonadaceae 976|Bacteroidetes L Involved in DNA repair and RecF pathway recombination recO - - ko:K03584 ko03440,map03440 - - - ko00000,ko00001,ko03400 - - - RecO_C,RecO_N LIIFOLDO_01244 694427.Palpr_1979 5.63e-115 351.0 COG0582@1|root,COG0582@2|Bacteria,4NDZJ@976|Bacteroidetes,2FMVW@200643|Bacteroidia,2305W@171551|Porphyromonadaceae 976|Bacteroidetes L Phage integrase SAM-like domain - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase LIIFOLDO_01246 694427.Palpr_1961 2.23e-09 57.4 2A7WY@1|root,30WWR@2|Bacteria,4PA9C@976|Bacteroidetes,2FW00@200643|Bacteroidia 976|Bacteroidetes L Helix-turn-helix domain - - - - - - - - - - - - HTH_17 LIIFOLDO_01247 435591.BDI_2984 3.09e-209 582.0 2EBSA@1|root,335S4@2|Bacteria,4NWEM@976|Bacteroidetes,2FS33@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01248 435591.BDI_2983 1.86e-63 194.0 COG1669@1|root,COG1669@2|Bacteria,4NT5Z@976|Bacteroidetes,2FU8I@200643|Bacteroidia,22YH0@171551|Porphyromonadaceae 976|Bacteroidetes S Nucleotidyltransferase domain - - - ko:K07075 - - - - ko00000 - - - NTP_transf_2 LIIFOLDO_01249 435591.BDI_2982 1.47e-76 228.0 COG2361@1|root,COG2361@2|Bacteria,4NV8D@976|Bacteroidetes,2FVJ2@200643|Bacteroidia,230K8@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function DUF86 - - - - - - - - - - - - DUF86 LIIFOLDO_01250 926559.JoomaDRAFT_1096 2.86e-43 147.0 2DY6E@1|root,32V4S@2|Bacteria,4NSH7@976|Bacteroidetes,1I440@117743|Flavobacteriia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01251 435591.BDI_2633 5.3e-12 79.3 2DUTV@1|root,33S7W@2|Bacteria,4P1VI@976|Bacteroidetes,2FWJJ@200643|Bacteroidia,22ZT0@171551|Porphyromonadaceae 435591.BDI_2633|- - - - - - - - - - - - - - - - LIIFOLDO_01252 435591.BDI_3314 2.9e-279 764.0 COG1835@1|root,COG1835@2|Bacteria,4NEW1@976|Bacteroidetes,2FN9M@200643|Bacteroidia 976|Bacteroidetes I Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - Acyl_transf_3 LIIFOLDO_01253 435591.BDI_3315 6.7e-56 174.0 2E59R@1|root,33021@2|Bacteria,4NVJD@976|Bacteroidetes,2FV4A@200643|Bacteroidia,230YC@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01254 435591.BDI_3316 0.0 2037.0 COG0642@1|root,COG3437@1|root,COG2205@2|Bacteria,COG3437@2|Bacteria,4NDXU@976|Bacteroidetes,2FM06@200643|Bacteroidia,2324Z@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - GAF,HATPase_c,HisKA,Hpt,PAS,PAS_3,PAS_4,PAS_9,Response_reg LIIFOLDO_01255 435591.BDI_3317 3.08e-153 429.0 COG4845@1|root,COG4845@2|Bacteria,4NPDG@976|Bacteroidetes,2G3BI@200643|Bacteroidia,22XQK@171551|Porphyromonadaceae 976|Bacteroidetes V Chloramphenicol acetyltransferase cat - 2.3.1.28 ko:K19271 - - - - br01600,ko00000,ko01000,ko01504 - - - CAT LIIFOLDO_01256 435591.BDI_3318 6.48e-125 355.0 COG0454@1|root,COG0456@2|Bacteria,4NQNE@976|Bacteroidetes,2FMXQ@200643|Bacteroidia,22Y8K@171551|Porphyromonadaceae 976|Bacteroidetes K Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - LIIFOLDO_01257 435591.BDI_3319 1.64e-238 654.0 COG0388@1|root,COG0388@2|Bacteria,4NGWX@976|Bacteroidetes,2FWMC@200643|Bacteroidia 976|Bacteroidetes S Carbon-nitrogen hydrolase - - - - - - - - - - - - CN_hydrolase LIIFOLDO_01258 435591.BDI_3320 2.26e-288 787.0 COG2311@1|root,COG2311@2|Bacteria,4NG01@976|Bacteroidetes,2FNJU@200643|Bacteroidia 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 10.00 - - - ko:K07148 - - - - ko00000 - - - DUF1624,DUF418 LIIFOLDO_01259 435591.BDI_3321 2.59e-255 701.0 28H74@1|root,2Z7JF@2|Bacteria,4NFR0@976|Bacteroidetes,2FQ0B@200643|Bacteroidia,22WJE@171551|Porphyromonadaceae 976|Bacteroidetes S Gliding motility-associated protein GldN gldN - - - - - - - - - - - - LIIFOLDO_01260 435591.BDI_3322 0.0 1014.0 28HG4@1|root,2Z7S0@2|Bacteria,4NE3G@976|Bacteroidetes,2FNU8@200643|Bacteroidia,22WNG@171551|Porphyromonadaceae 976|Bacteroidetes S Gliding motility-associated protein GldM gldM - - - - - - - - - - - GldM_C,GldM_N LIIFOLDO_01261 435591.BDI_3323 2.92e-189 533.0 28IG3@1|root,2Z8HM@2|Bacteria,4NFJR@976|Bacteroidetes,2FP1Z@200643|Bacteroidia,22WE3@171551|Porphyromonadaceae 976|Bacteroidetes S Gliding motility-associated protein, GldL gldL - - - - - - - - - - - - LIIFOLDO_01262 435591.BDI_3324 0.0 986.0 COG1262@1|root,COG1262@2|Bacteria,4NGY2@976|Bacteroidetes,2FPTN@200643|Bacteroidia,22W76@171551|Porphyromonadaceae 976|Bacteroidetes M gliding motility-associated lipoprotein GldK gldK - - - - - - - - - - - FGE-sulfatase LIIFOLDO_01263 435591.BDI_3325 6.81e-205 568.0 COG0226@1|root,COG0226@2|Bacteria,4NM30@976|Bacteroidetes,2FQ05@200643|Bacteroidia 976|Bacteroidetes P membrane - - - - - - - - - - - - PorP_SprF LIIFOLDO_01264 1122931.AUAE01000007_gene1294 1.61e-48 154.0 2C8VT@1|root,32RN1@2|Bacteria,4NS78@976|Bacteroidetes,2FTSK@200643|Bacteroidia,22YD9@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF2795) - - - - - - - - - - - - DUF2795 LIIFOLDO_01265 435591.BDI_3327 3.65e-133 377.0 COG2096@1|root,COG2096@2|Bacteria,4NFHQ@976|Bacteroidetes,2FQJ0@200643|Bacteroidia,22Y06@171551|Porphyromonadaceae 976|Bacteroidetes S adenosyltransferase yvqK - 2.5.1.17 ko:K00798 ko00860,ko01100,map00860,map01100 M00122 R01492,R05220,R07268 RC00533 ko00000,ko00001,ko00002,ko01000 - - - Cob_adeno_trans LIIFOLDO_01266 435591.BDI_3328 1.51e-190 528.0 COG4122@1|root,COG4122@2|Bacteria,4NG1S@976|Bacteroidetes,2FNB5@200643|Bacteroidia,22YQI@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score - - - - - - - - - - - - Methyltransf_24 LIIFOLDO_01267 435591.BDI_3329 2.21e-310 847.0 COG1538@1|root,COG1538@2|Bacteria,4NEMI@976|Bacteroidetes,2FMRJ@200643|Bacteroidia,22W2E@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein tolC - - - - - - - - - - - OEP LIIFOLDO_01268 435591.BDI_3330 0.0 1876.0 COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,2FM3B@200643|Bacteroidia,22VY6@171551|Porphyromonadaceae 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family bepE_4 - - ko:K03296,ko:K18138 ko01501,ko01503,map01501,map01503 M00647,M00699,M00718 - - ko00000,ko00001,ko00002,ko01504,ko02000 2.A.6.2 - - ACR_tran LIIFOLDO_01269 435591.BDI_3331 1.87e-250 689.0 COG0845@1|root,COG0845@2|Bacteria,4NERP@976|Bacteroidetes,2FMFG@200643|Bacteroidia,22XHS@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K03585 ko01501,ko01503,map01501,map01503 M00646,M00647,M00699,M00718 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 2.A.6.2,8.A.1.6 - - HlyD_D23 LIIFOLDO_01270 435591.BDI_3332 0.0 1897.0 COG1305@1|root,COG1305@2|Bacteria,4NFR8@976|Bacteroidetes,2FPAP@200643|Bacteroidia,22W3W@171551|Porphyromonadaceae 976|Bacteroidetes E Transglutaminase-like superfamily - - - - - - - - - - - - Transglut_core LIIFOLDO_01271 435591.BDI_3333 0.0 954.0 COG3263@1|root,COG3263@2|Bacteria,4NFNS@976|Bacteroidetes,2FMZZ@200643|Bacteroidia,22X6I@171551|Porphyromonadaceae 976|Bacteroidetes P Potassium cvrA - - ko:K11105 - - - - ko00000,ko02000 2.A.36.6 - - Na_H_Exchanger,TrkA_C LIIFOLDO_01273 435591.BDI_3334 0.0 1432.0 COG3533@1|root,COG3533@2|Bacteria,4NG7T@976|Bacteroidetes,2FPXE@200643|Bacteroidia,22WKF@171551|Porphyromonadaceae 976|Bacteroidetes S Beta-L-arabinofuranosidase, GH127 - - - - - - - - - - - - Glyco_hydro_127 LIIFOLDO_01274 435591.BDI_3335 0.0 1295.0 COG3533@1|root,COG3533@2|Bacteria,4NFW3@976|Bacteroidetes,2FM1I@200643|Bacteroidia,22WXF@171551|Porphyromonadaceae 976|Bacteroidetes S Beta-L-arabinofuranosidase, GH127 - - - ko:K09955 - - - - ko00000 - - - Glyco_hydro_127 LIIFOLDO_01275 435591.BDI_2476 5.59e-249 684.0 COG3712@1|root,COG3712@2|Bacteria,4NR47@976|Bacteroidetes,2FWBG@200643|Bacteroidia 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR LIIFOLDO_01276 435591.BDI_2477 9.29e-123 352.0 COG1595@1|root,COG1595@2|Bacteria,4NNBY@976|Bacteroidetes,2FXHP@200643|Bacteroidia 976|Bacteroidetes K Sigma-70, region 4 - - - - - - - - - - - - Sigma70_r2,Sigma70_r4_2 LIIFOLDO_01277 435591.BDI_2478 0.0 1849.0 COG4206@1|root,COG4206@2|Bacteria,4PKFW@976|Bacteroidetes,2FM4V@200643|Bacteroidia,22WYS@171551|Porphyromonadaceae 976|Bacteroidetes H Outer membrane protein beta-barrel family - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3 LIIFOLDO_01278 435591.BDI_2479 0.0 990.0 COG0642@1|root,COG2205@2|Bacteria,4NEFW@976|Bacteroidetes,2FPG5@200643|Bacteroidia,22WQ1@171551|Porphyromonadaceae 976|Bacteroidetes T ATPase histidine kinase DNA gyrase B HSP90 domain protein - - 2.7.13.3 ko:K07636 ko02020,map02020 M00434 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - HATPase_c,HisKA LIIFOLDO_01279 1122931.AUAE01000012_gene2231 5.67e-176 490.0 COG0745@1|root,COG0745@2|Bacteria,4NF1I@976|Bacteroidetes,2FNZV@200643|Bacteroidia,22WBV@171551|Porphyromonadaceae 976|Bacteroidetes K COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain rprY - - - - - - - - - - - Response_reg,Trans_reg_C LIIFOLDO_01280 435591.BDI_2481 0.0 870.0 COG1966@1|root,COG1966@2|Bacteria,4NFPD@976|Bacteroidetes,2FM48@200643|Bacteroidia,22X1U@171551|Porphyromonadaceae 976|Bacteroidetes T Carbon starvation protein cstA - - ko:K06200 - - - - ko00000 - - - CstA,CstA_5TM LIIFOLDO_01281 435591.BDI_2482 2.07e-91 268.0 COG1610@1|root,COG1610@2|Bacteria,4NQFI@976|Bacteroidetes,2FN46@200643|Bacteroidia,22Y3Y@171551|Porphyromonadaceae 976|Bacteroidetes S Glutamyl-tRNA amidotransferase - - - ko:K09117 - - - - ko00000 - - - YqeY LIIFOLDO_01282 435591.BDI_2483 5.42e-310 847.0 COG0206@1|root,COG0206@2|Bacteria,4NF8N@976|Bacteroidetes,2FMJV@200643|Bacteroidia,22WFV@171551|Porphyromonadaceae 976|Bacteroidetes D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity ftsZ - - ko:K03531 ko04112,map04112 - - - ko00000,ko00001,ko02048,ko03036,ko04812 - - - FtsZ_C,Tubulin LIIFOLDO_01283 435591.BDI_2484 2.51e-286 786.0 COG0849@1|root,COG0849@2|Bacteria,4NE0V@976|Bacteroidetes,2FMUG@200643|Bacteroidia,22X25@171551|Porphyromonadaceae 976|Bacteroidetes D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring ftsA - - ko:K03590 ko04112,map04112 - - - ko00000,ko00001,ko03036,ko04812 - - - FtsA,SHS2_FTSA LIIFOLDO_01284 435591.BDI_2485 1.89e-169 473.0 COG1589@1|root,COG1589@2|Bacteria,4NGPN@976|Bacteroidetes,2FME2@200643|Bacteroidia,22XZ6@171551|Porphyromonadaceae 976|Bacteroidetes M Cell division protein FtsQ ftsQ - - ko:K03589 ko04112,map04112 - - - ko00000,ko00001,ko03036 - - - FtsQ LIIFOLDO_01285 435591.BDI_2486 0.0 921.0 COG0773@1|root,COG0773@2|Bacteria,4NE1V@976|Bacteroidetes,2FM6G@200643|Bacteroidia,22WMY@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the MurCDEF family murC - 6.3.2.8 ko:K01924 ko00471,ko00550,ko01100,map00471,map00550,map01100 - R03193 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Mur_ligase,Mur_ligase_C,Mur_ligase_M LIIFOLDO_01286 435591.BDI_2487 7.84e-264 723.0 COG0707@1|root,COG0707@2|Bacteria,4NE6D@976|Bacteroidetes,2FMND@200643|Bacteroidia,22X87@171551|Porphyromonadaceae 976|Bacteroidetes M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) murG - 2.4.1.227 ko:K02563 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 - R05032,R05662 RC00005,RC00049 ko00000,ko00001,ko01000,ko01011 - GT28 - Glyco_tran_28_C,Glyco_transf_28 LIIFOLDO_01287 435591.BDI_2488 5.48e-298 815.0 COG0772@1|root,COG0772@2|Bacteria,4NFIM@976|Bacteroidetes,2FM93@200643|Bacteroidia,22WW9@171551|Porphyromonadaceae 976|Bacteroidetes D Belongs to the SEDS family ftsW - - ko:K03588 ko04112,map04112 - - - ko00000,ko00001,ko02000,ko03036 2.A.103.1 - - FTSW_RODA_SPOVE LIIFOLDO_01288 435591.BDI_2489 0.0 877.0 COG0771@1|root,COG0771@2|Bacteria,4NEFF@976|Bacteroidetes,2FP0X@200643|Bacteroidia,22VXQ@171551|Porphyromonadaceae 976|Bacteroidetes M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) murD - 6.3.2.9 ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 - R02783 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Mur_ligase_C,Mur_ligase_M LIIFOLDO_01289 435591.BDI_2490 6.12e-296 808.0 COG0472@1|root,COG0472@2|Bacteria,4NE0T@976|Bacteroidetes,2FMC3@200643|Bacteroidia,22WEF@171551|Porphyromonadaceae 976|Bacteroidetes M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan mraY - 2.7.8.13 ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 - R05629,R05630 RC00002,RC02753 ko00000,ko00001,ko01000,ko01011 9.B.146 - - Glycos_transf_4,MraY_sig1 LIIFOLDO_01290 435591.BDI_2491 0.0 947.0 COG0769@1|root,COG0769@2|Bacteria,4NE9W@976|Bacteroidetes,2FM8E@200643|Bacteroidia,22W0E@171551|Porphyromonadaceae 976|Bacteroidetes M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan murE - 6.3.2.13 ko:K01928 ko00300,ko00550,map00300,map00550 - R02788 RC00064,RC00090 ko00000,ko00001,ko01000,ko01011 - - - Mur_ligase,Mur_ligase_C,Mur_ligase_M LIIFOLDO_01291 435591.BDI_2492 0.0 1434.0 COG0768@1|root,COG2815@1|root,COG0768@2|Bacteria,COG2815@2|Bacteria,4NERV@976|Bacteroidetes,2FM0U@200643|Bacteroidia,22WNY@171551|Porphyromonadaceae 976|Bacteroidetes M Penicillin-binding protein, transpeptidase domain protein ftsI - 3.4.16.4 ko:K03587 ko00550,ko01501,map00550,map01501 - - - ko00000,ko00001,ko01000,ko01011,ko03036 - - - PASTA,PBP_dimer,Transpeptidase LIIFOLDO_01292 435591.BDI_2493 1.15e-75 226.0 2E4WB@1|root,32ZQF@2|Bacteria,4NUMY@976|Bacteroidetes,2FSKJ@200643|Bacteroidia,22YNN@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - LIIFOLDO_01293 435591.BDI_2494 8.93e-220 606.0 COG0275@1|root,COG0275@2|Bacteria,4NFQB@976|Bacteroidetes,2FMPT@200643|Bacteroidia,22W13@171551|Porphyromonadaceae 976|Bacteroidetes J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA rsmH GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 ko:K03438 - - - - ko00000,ko01000,ko03009 - - - Methyltransf_5 LIIFOLDO_01294 435591.BDI_2495 8.53e-199 550.0 COG0204@1|root,COG0204@2|Bacteria,4NF25@976|Bacteroidetes,2FNJQ@200643|Bacteroidia,22XB4@171551|Porphyromonadaceae 976|Bacteroidetes I Acyltransferase - - - - - - - - - - - - Acyltransferase LIIFOLDO_01295 435591.BDI_2496 5.71e-237 651.0 COG3176@1|root,COG3176@2|Bacteria,4PKEK@976|Bacteroidetes,2FKZ3@200643|Bacteroidia,22W0V@171551|Porphyromonadaceae 976|Bacteroidetes S Hemolysin - - - - - - - - - - - - Acetyltransf_5 LIIFOLDO_01296 435591.BDI_2497 1.76e-179 499.0 2DE7K@1|root,2ZKV4@2|Bacteria,4NMV6@976|Bacteroidetes,2FQD6@200643|Bacteroidia,22ZRW@171551|Porphyromonadaceae 976|Bacteroidetes S Exopolysaccharide biosynthesis protein YbjH - - - - - - - - - - - - YjbH LIIFOLDO_01297 435591.BDI_2498 0.0 1385.0 COG2374@1|root,COG2374@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - Exo_endo_phos,LTD LIIFOLDO_01298 435591.BDI_2499 3.51e-314 854.0 2C1MF@1|root,2ZCMF@2|Bacteria,4PMVJ@976|Bacteroidetes,2G0I6@200643|Bacteroidia,22ZI6@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - YjbH LIIFOLDO_01299 435591.BDI_2500 0.0 947.0 COG1502@1|root,COG1502@2|Bacteria,4NE2W@976|Bacteroidetes,2FMEA@200643|Bacteroidia,22W66@171551|Porphyromonadaceae 976|Bacteroidetes I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol cls - - ko:K06131 ko00564,ko01100,map00564,map01100 - R07390 RC00017 ko00000,ko00001,ko01000 - - - PLDc_2,PLDc_N LIIFOLDO_01300 435591.BDI_2501 8.29e-129 366.0 COG0742@1|root,COG0742@2|Bacteria,4NM7J@976|Bacteroidetes,2FSR0@200643|Bacteroidia,22XZ4@171551|Porphyromonadaceae 976|Bacteroidetes L RNA methyltransferase, RsmD family rsmD - 2.1.1.171 ko:K08316 - - R07234 RC00003 ko00000,ko01000,ko03009 - - - Cons_hypoth95 LIIFOLDO_01301 435591.BDI_2502 1.91e-194 539.0 2DMVR@1|root,32TZG@2|Bacteria,4NSV8@976|Bacteroidetes,2G3AR@200643|Bacteroidia,23213@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3822) - - - - - - - - - - - - DUF3822 LIIFOLDO_01302 435591.BDI_2503 1.29e-147 416.0 2C0G9@1|root,310GM@2|Bacteria,4NHU0@976|Bacteroidetes,2FN0C@200643|Bacteroidia,22YIM@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG19144 non supervised orthologous group - - - - - - - - - - - - - LIIFOLDO_01303 435591.BDI_1184 3.79e-62 190.0 COG1343@1|root,COG1343@2|Bacteria,4P63I@976|Bacteroidetes,2FT6U@200643|Bacteroidia,231RW@171551|Porphyromonadaceae 976|Bacteroidetes L CRISPR associated protein Cas2 cas2 - - ko:K09951 - - - - ko00000,ko02048 - - - CRISPR_Cas2 LIIFOLDO_01304 435591.BDI_1183 5.78e-245 672.0 COG1518@1|root,COG1518@2|Bacteria,4NRQB@976|Bacteroidetes,2G37T@200643|Bacteroidia,22Z9N@171551|Porphyromonadaceae 976|Bacteroidetes L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette cas1 - - ko:K15342 - - - - ko00000,ko02048,ko03400 - - - Cas_Cas1,Cas_Cas4 LIIFOLDO_01305 435591.BDI_1182 5.95e-167 465.0 COG1468@1|root,COG1468@2|Bacteria,4P2GQ@976|Bacteroidetes,2FMX4@200643|Bacteroidia,23079@171551|Porphyromonadaceae 976|Bacteroidetes L Domain of unknown function DUF83 cas4 - 3.1.12.1 ko:K07464 - - - - ko00000,ko01000,ko02048 - - - Cas_Cas4 LIIFOLDO_01306 435591.BDI_1181 2.34e-204 565.0 COG3649@1|root,COG3649@2|Bacteria,4NNSG@976|Bacteroidetes,2FVKD@200643|Bacteroidia,22Z1R@171551|Porphyromonadaceae 976|Bacteroidetes L CRISPR-associated protein Cas7 - - - ko:K19115,ko:K19118 - - - - ko00000,ko02048 - - - Cas_Cas7 LIIFOLDO_01307 435591.BDI_1180 0.0 1088.0 28HN3@1|root,2Z7WH@2|Bacteria,4NK6U@976|Bacteroidetes,2FNR0@200643|Bacteroidia 976|Bacteroidetes S CRISPR-associated protein, Csd1 family csd1 - - ko:K19117 - - - - ko00000,ko02048 - - - Cas_Csd1 LIIFOLDO_01308 435591.BDI_1179 1.45e-165 462.0 2DBAF@1|root,2Z82V@2|Bacteria,4NNES@976|Bacteroidetes,2FQ65@200643|Bacteroidia 976|Bacteroidetes S CRISPR-associated protein Cas5, dvulg subtype cas5d - - ko:K19119 - - - - ko00000,ko02048 - - - Cas_Cas5d LIIFOLDO_01309 435591.BDI_1178 0.0 1477.0 COG1203@1|root,COG1203@2|Bacteria,4NFZ0@976|Bacteroidetes,2FPYD@200643|Bacteroidia,22YEC@171551|Porphyromonadaceae 976|Bacteroidetes L CRISPR-associated endonuclease Cas3-HD - - - ko:K07012 - - - - ko00000,ko01000,ko02048 - - - DEAD,HD,Helicase_C,ResIII LIIFOLDO_01310 435591.BDI_1177 1.15e-313 855.0 COG0534@1|root,COG0534@2|Bacteria,4NDUF@976|Bacteroidetes,2FMX6@200643|Bacteroidia,22WP6@171551|Porphyromonadaceae 976|Bacteroidetes V Multidrug transporter MatE - - - - - - - - - - - - MatE LIIFOLDO_01311 435591.BDI_1176 1.06e-257 705.0 COG2957@1|root,COG2957@2|Bacteria,4NGF8@976|Bacteroidetes,2FMQH@200643|Bacteroidia,22X7U@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the agmatine deiminase family aguA - 3.5.3.12 ko:K10536 ko00330,ko01100,map00330,map01100 - R01416 RC00177 ko00000,ko00001,ko01000 - - - PAD_porph LIIFOLDO_01312 435591.BDI_1175 9.64e-217 597.0 COG0388@1|root,COG0388@2|Bacteria,4NEME@976|Bacteroidetes,2FMCZ@200643|Bacteroidia,22W1N@171551|Porphyromonadaceae 976|Bacteroidetes S Hydrolase, carbon-nitrogen family pabB - 3.5.1.53 ko:K12251 ko00330,ko01100,map00330,map01100 - R01152 RC00096 ko00000,ko00001,ko01000 - - - CN_hydrolase LIIFOLDO_01313 435591.BDI_1174 3.35e-246 675.0 COG0147@1|root,COG0147@2|Bacteria,4NFKB@976|Bacteroidetes,2FMRN@200643|Bacteroidia,22WC0@171551|Porphyromonadaceae 976|Bacteroidetes EH component I pabB - 2.6.1.85 ko:K01665 ko00790,map00790 - R01716 RC00010,RC01418 ko00000,ko00001,ko01000 - - - Chorismate_bind LIIFOLDO_01314 435591.BDI_1173 5.54e-150 421.0 COG0115@1|root,COG0115@2|Bacteria,4NSFJ@976|Bacteroidetes,2FNQJ@200643|Bacteroidia,22YIQ@171551|Porphyromonadaceae 976|Bacteroidetes EH Amino-transferase class IV - - 4.1.3.38 ko:K02619 ko00790,map00790 - R05553 RC01843,RC02148 ko00000,ko00001,ko01000 - - - Aminotran_4 LIIFOLDO_01315 1408445.JHXP01000023_gene2934 3.16e-05 55.5 2DS9X@1|root,33F73@2|Bacteria,1QB2M@1224|Proteobacteria,1T6K1@1236|Gammaproteobacteria,1JDSG@118969|Legionellales 118969|Legionellales - - - - - - - - - - - - - - - LIIFOLDO_01316 435591.BDI_1171 0.0 1431.0 COG1470@1|root,COG1470@2|Bacteria,4NFPN@976|Bacteroidetes,2FMUB@200643|Bacteroidia,2324P@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG25960 non supervised orthologous group - - - - - - - - - - - - - LIIFOLDO_01317 435591.BDI_1170 0.0 972.0 COG0167@1|root,COG0493@1|root,COG1146@1|root,COG0167@2|Bacteria,COG0493@2|Bacteria,COG1146@2|Bacteria,4NGSB@976|Bacteroidetes,2FREK@200643|Bacteroidia 976|Bacteroidetes C 4Fe-4S dicluster domain - - 1.3.1.1,1.3.98.1 ko:K00226,ko:K17723 ko00240,ko00410,ko00770,ko01100,map00240,map00410,map00770,map01100 M00046,M00051 R00977,R01414,R01867,R11026 RC00051,RC00072,RC00123 ko00000,ko00001,ko00002,ko01000 - - - DHO_dh,Fer4_21 LIIFOLDO_01320 435591.BDI_1167 5.37e-82 245.0 COG2207@1|root,COG2207@2|Bacteria 2|Bacteria K Transcriptional regulator - - - - - - - - - - - - HTH_18,TPR_12,TPR_8 LIIFOLDO_01321 435591.BDI_1166 0.0 1031.0 COG0457@1|root,COG2207@1|root,COG0457@2|Bacteria,COG2207@2|Bacteria 2|Bacteria K Transcriptional regulator - - - - - - - - - - - - HTH_18,TPR_12,TPR_8 LIIFOLDO_01322 435591.BDI_1165 0.0 1672.0 COG1629@1|root,COG1629@2|Bacteria,4NHSG@976|Bacteroidetes,2FNUX@200643|Bacteroidia,22WVU@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent receptor plug domain - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg,Plug,TonB_dep_Rec LIIFOLDO_01324 435591.BDI_1163 6.51e-291 793.0 2CF1V@1|root,2Z9BC@2|Bacteria,4NHGM@976|Bacteroidetes,2FNUI@200643|Bacteroidia,22XYE@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF4876) - - - - - - - - - - - - DUF4876 LIIFOLDO_01325 435591.BDI_1162 0.0 1194.0 COG0514@1|root,COG0514@2|Bacteria,4NG10@976|Bacteroidetes,2FPSQ@200643|Bacteroidia,22XF8@171551|Porphyromonadaceae 976|Bacteroidetes L RQC recQ3 - 3.6.4.12 ko:K03654 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03400 - - - DEAD,HRDC,HTH_40,Helicase_C,RQC,RecQ_Zn_bind LIIFOLDO_01326 435591.BDI_1161 1.51e-297 812.0 COG0513@1|root,COG0513@2|Bacteria,4NEVI@976|Bacteroidetes,2FM7Y@200643|Bacteroidia,22W9M@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the DEAD box helicase family rhlE - 3.6.4.13 ko:K11927 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03019 - - - DEAD,Helicase_C LIIFOLDO_01327 435591.BDI_1160 5.22e-97 284.0 COG1595@1|root,COG1595@2|Bacteria,4NU94@976|Bacteroidetes,2FNJI@200643|Bacteroidia,231PK@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4,Sigma70_r4_2 LIIFOLDO_01328 435591.BDI_1159 5.29e-230 634.0 COG3712@1|root,COG3712@2|Bacteria,4NR8S@976|Bacteroidetes,2G304@200643|Bacteroidia,22ZKD@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR LIIFOLDO_01329 435591.BDI_1158 3.46e-61 209.0 COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,2FX80@200643|Bacteroidia,2324N@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_01330 435591.BDI_3421 0.0 940.0 COG0446@1|root,COG0446@2|Bacteria,4NEK6@976|Bacteroidetes,2FT9Y@200643|Bacteroidia,22ZSH@171551|Porphyromonadaceae 976|Bacteroidetes S Pyridine nucleotide-disulphide oxidoreductase - - 1.8.5.4 ko:K17218 ko00920,map00920 - R10152 RC03155 ko00000,ko00001,ko01000 - - - Pyr_redox_2 LIIFOLDO_01331 435591.BDI_3420 0.0 1852.0 COG0247@1|root,COG0277@1|root,COG0479@1|root,COG0247@2|Bacteria,COG0277@2|Bacteria,COG0479@2|Bacteria,4NEK3@976|Bacteroidetes,2FPEG@200643|Bacteroidia,22VX1@171551|Porphyromonadaceae 976|Bacteroidetes C FAD linked oxidases, C-terminal domain - - - ko:K18930 - - - - ko00000 - - - CCG,FAD-oxidase_C,FAD_binding_4,Fer4_17,Fer4_7,Fer4_8 LIIFOLDO_01332 435591.BDI_3419 3.39e-276 754.0 COG0614@1|root,COG0614@2|Bacteria,4NH9F@976|Bacteroidetes,2FMDS@200643|Bacteroidia,22X11@171551|Porphyromonadaceae 976|Bacteroidetes P COG0614 ABC-type Fe3 -hydroxamate transport system, periplasmic component - - - ko:K02016 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko02000 3.A.1.14 - - Peripla_BP_2 LIIFOLDO_01333 435591.BDI_3418 0.0 882.0 COG3391@1|root,COG3391@2|Bacteria,4NKVB@976|Bacteroidetes,2G04G@200643|Bacteroidia,231XV@171551|Porphyromonadaceae 976|Bacteroidetes S amine dehydrogenase activity - - - - - - - - - - - - - LIIFOLDO_01334 435591.BDI_3417 0.0 1342.0 COG4206@1|root,COG4206@2|Bacteria,4NED9@976|Bacteroidetes,2FNSZ@200643|Bacteroidia,22WUA@171551|Porphyromonadaceae 976|Bacteroidetes H TonB-dependent receptor - - - - - - - - - - - - Plug,TonB_dep_Rec LIIFOLDO_01335 435591.BDI_3416 1.64e-113 326.0 28WU8@1|root,2ZITQ@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - LIIFOLDO_01336 679937.Bcop_0789 4.37e-11 63.2 COG1878@1|root,COG1878@2|Bacteria 2|Bacteria S arylformamidase activity kynB GO:0003674,GO:0003824,GO:0005488,GO:0016787,GO:0016810,GO:0016812,GO:0030145,GO:0043167,GO:0043169,GO:0046872,GO:0046914 1.2.1.70,3.5.1.9 ko:K02492,ko:K07130 ko00380,ko00630,ko00860,ko01100,ko01110,ko01120,map00380,map00630,map00860,map01100,map01110,map01120 M00038,M00121 R00988,R01959,R04109,R04911 RC00055,RC00149,RC00263,RC00323 ko00000,ko00001,ko00002,ko01000 - - - Cyclase LIIFOLDO_01337 435591.BDI_3414 4.65e-132 375.0 COG0110@1|root,COG0110@2|Bacteria,4NH27@976|Bacteroidetes,2FQGE@200643|Bacteroidia,22YBQ@171551|Porphyromonadaceae 976|Bacteroidetes S Maltose acetyltransferase - - 2.3.1.79 ko:K00661 - - - - ko00000,ko01000 - - - Hexapep,Hexapep_2,Mac LIIFOLDO_01338 435591.BDI_3413 6.44e-145 408.0 COG1011@1|root,COG1011@2|Bacteria,4NIMR@976|Bacteroidetes,2FV2Y@200643|Bacteroidia,231PG@171551|Porphyromonadaceae 976|Bacteroidetes S Haloacid dehalogenase-like hydrolase - - 3.8.1.2 ko:K01560,ko:K07025 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 - R05287 RC00697 ko00000,ko00001,ko01000 - - - HAD_2 LIIFOLDO_01340 435591.BDI_3412 4.99e-181 504.0 COG1076@1|root,COG1076@2|Bacteria,4NF1B@976|Bacteroidetes,2FQ12@200643|Bacteroidia,22XU9@171551|Porphyromonadaceae 976|Bacteroidetes O Tellurite resistance protein TerB - - - ko:K05801 - - - - ko00000,ko03110 - - - DnaJ,TerB LIIFOLDO_01341 435591.BDI_3411 0.0 1382.0 COG1629@1|root,COG4771@2|Bacteria,4NET0@976|Bacteroidetes,2FMGU@200643|Bacteroidia,22XEU@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent receptor - - - ko:K16089 - - - - ko00000,ko02000 1.B.14.1,1.B.14.10 - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_01342 435591.BDI_3410 3.63e-272 743.0 COG4822@1|root,COG4822@2|Bacteria,4P0UZ@976|Bacteroidetes,2FPUD@200643|Bacteroidia,22ZIT@171551|Porphyromonadaceae 976|Bacteroidetes H Cobalt chelatase (CbiK) - - 4.99.1.3 ko:K02190 ko00860,ko01100,map00860,map01100 - R05807 RC01012 ko00000,ko00001,ko01000 - - - CbiK LIIFOLDO_01343 435591.BDI_3409 1.27e-221 611.0 COG4822@1|root,COG4822@2|Bacteria,4NEGU@976|Bacteroidetes,2FNCV@200643|Bacteroidia,22WTQ@171551|Porphyromonadaceae 976|Bacteroidetes H CbiX - - 4.99.1.3 ko:K02190 ko00860,ko01100,map00860,map01100 - R05807 RC01012 ko00000,ko00001,ko01000 - - - CbiK LIIFOLDO_01344 435591.BDI_3408 0.0 1459.0 COG1629@1|root,COG4771@2|Bacteria,4NET0@976|Bacteroidetes,2FMGU@200643|Bacteroidia,22WT6@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - ko:K16089 - - - - ko00000,ko02000 1.B.14.1,1.B.14.10 - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_01345 435591.BDI_3407 0.0 1485.0 COG1327@1|root,COG1328@1|root,COG1327@2|Bacteria,COG1328@2|Bacteria,4NGPS@976|Bacteroidetes,2FNK4@200643|Bacteroidia,22WTK@171551|Porphyromonadaceae 976|Bacteroidetes FK Ribonucleoside-triphosphate reductase nrdD - 1.1.98.6 ko:K21636 ko00230,ko00240,ko01100,map00230,map00240,map01100 M00053 R11633,R11634,R11635,R11636 RC00613 ko00000,ko00001,ko00002,ko01000 - - - ATP-cone,NRDD LIIFOLDO_01346 435591.BDI_3406 3.77e-118 337.0 COG0602@1|root,COG0602@2|Bacteria,4NN9F@976|Bacteroidetes,2FPEE@200643|Bacteroidia,22Y2A@171551|Porphyromonadaceae 976|Bacteroidetes C Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine nrdG - 1.97.1.4 ko:K04068 - - R04710 - ko00000,ko01000 - - - Fer4_12,Radical_SAM LIIFOLDO_01347 1122981.AUME01000007_gene1110 7.69e-303 847.0 COG4206@1|root,COG4206@2|Bacteria,4NED9@976|Bacteroidetes,2FNSZ@200643|Bacteroidia 976|Bacteroidetes H TonB-dependent receptor - - - - - - - - - - - - Plug,TonB_dep_Rec LIIFOLDO_01348 1122981.AUME01000007_gene1111 3.55e-202 568.0 COG3391@1|root,COG3391@2|Bacteria,4NESV@976|Bacteroidetes,2FNUJ@200643|Bacteroidia 976|Bacteroidetes S amine dehydrogenase activity - - - - - - - - - - - - - LIIFOLDO_01349 1122981.AUME01000007_gene1112 2.74e-186 530.0 COG3291@1|root,COG3291@2|Bacteria,4NF2V@976|Bacteroidetes,2FM9X@200643|Bacteroidia 976|Bacteroidetes S COG NOG23387 non supervised orthologous group - - - - - - - - - - - - DUF4988,PKD_3 LIIFOLDO_01350 575590.HMPREF0156_01615 1.99e-203 588.0 COG3292@1|root,COG3292@2|Bacteria,4NF78@976|Bacteroidetes 976|Bacteroidetes T Domain of unknown function (DUF5074) - - - - - - - - - - - - DUF5074 LIIFOLDO_01351 435591.BDI_3405 6.34e-295 808.0 COG2966@1|root,COG3610@1|root,COG2966@2|Bacteria,COG3610@2|Bacteria,4NI61@976|Bacteroidetes,2FNR6@200643|Bacteroidia 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - ThrE,ThrE_2 LIIFOLDO_01352 251229.Chro_3640 6.45e-129 413.0 COG4773@1|root,COG4773@2|Bacteria,1G3US@1117|Cyanobacteria,3VNJT@52604|Pleurocapsales 1117|Cyanobacteria P COGs COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - AMIN,Plug,TonB_dep_Rec LIIFOLDO_01353 1173022.Cri9333_0285 9.66e-39 149.0 COG3182@1|root,COG3182@2|Bacteria,1G2SQ@1117|Cyanobacteria,1HAS2@1150|Oscillatoriales 1117|Cyanobacteria S Peptidase M4, propeptide, PepSY - - - - - - - - - - - - PepSY,PepSY_TM LIIFOLDO_01354 435591.BDI_3662 1.31e-144 416.0 COG0641@1|root,COG0641@2|Bacteria,4NJ9R@976|Bacteroidetes,2FPKJ@200643|Bacteroidia 976|Bacteroidetes C radical SAM domain protein - - - ko:K06871 - - - - ko00000 - - - Fer4_12,Fer4_14,Radical_SAM LIIFOLDO_01355 435591.BDI_3663 0.0 1525.0 COG1629@1|root,COG4771@2|Bacteria,4NK7P@976|Bacteroidetes,2FPJ5@200643|Bacteroidia,22ZZP@171551|Porphyromonadaceae 976|Bacteroidetes P Outer membrane protein beta-barrel family - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3,Plug LIIFOLDO_01356 435591.BDI_3664 0.0 1429.0 COG2274@1|root,COG2274@2|Bacteria,4NE19@976|Bacteroidetes,2FNRE@200643|Bacteroidia,22XJQ@171551|Porphyromonadaceae 976|Bacteroidetes V ABC transporter, ATP-binding protein lktB - - ko:K06147 - - - - ko00000,ko02000 3.A.1.106,3.A.1.109,3.A.1.21 - - ABC_membrane,ABC_tran,Peptidase_C39 LIIFOLDO_01357 1236518.BAKP01000110_gene2767 0.000213 43.9 COG1566@1|root,COG1566@2|Bacteria,4NX48@976|Bacteroidetes,2FUP6@200643|Bacteroidia 976|Bacteroidetes V PFAM secretion protein HlyD family protein - - - - - - - - - - - - HlyD_3 LIIFOLDO_01358 435591.BDI_3665 1.22e-101 294.0 COG1669@1|root,COG1669@2|Bacteria,4NS8N@976|Bacteroidetes,2FT35@200643|Bacteroidia 976|Bacteroidetes S Nucleotidyltransferase substrate-binding family protein - - - - - - - - - - - - NTase_sub_bind LIIFOLDO_01359 435591.BDI_3666 1.25e-72 218.0 COG1708@1|root,COG1708@2|Bacteria,4NUN4@976|Bacteroidetes,2G0HR@200643|Bacteroidia 976|Bacteroidetes S Nucleotidyltransferase domain - - - - - - - - - - - - NTP_transf_2 LIIFOLDO_01360 435591.BDI_3667 4.32e-147 414.0 COG0778@1|root,COG0778@2|Bacteria,4NP0K@976|Bacteroidetes,2FPFS@200643|Bacteroidia,22XYX@171551|Porphyromonadaceae 976|Bacteroidetes C Nitroreductase family - - - - - - - - - - - - Nitroreductase LIIFOLDO_01361 435591.BDI_3668 0.0 1648.0 COG1629@1|root,COG4771@2|Bacteria,4NEIG@976|Bacteroidetes,2FM1K@200643|Bacteroidia,22XI8@171551|Porphyromonadaceae 976|Bacteroidetes P Outer membrane protein beta-barrel family - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3,Plug LIIFOLDO_01362 435591.BDI_3669 0.0 1150.0 28KYZ@1|root,2ZAEB@2|Bacteria,4NHBZ@976|Bacteroidetes,2FP4X@200643|Bacteroidia 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - - LIIFOLDO_01363 435591.BDI_3670 0.0 1044.0 COG0823@1|root,COG0823@2|Bacteria,4NGH4@976|Bacteroidetes,2FN8G@200643|Bacteroidia 976|Bacteroidetes U WD40-like Beta Propeller Repeat - - - - - - - - - - - - PD40 LIIFOLDO_01364 435591.BDI_3671 0.0 1334.0 COG3855@1|root,COG3855@2|Bacteria,4NGBV@976|Bacteroidetes,2FPT1@200643|Bacteroidia,22X6J@171551|Porphyromonadaceae 976|Bacteroidetes G catalyzes the formation of fructose 6-phosphate from fructose-1,6-bisphosphate fbp - 3.1.3.11 ko:K04041 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200 M00003,M00165,M00167 R00762,R04780 RC00017 ko00000,ko00001,ko00002,ko01000 - - - FBPase_2 LIIFOLDO_01365 435591.BDI_3672 0.0 1985.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FWS8@200643|Bacteroidia,22WS3@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_01366 435591.BDI_3673 0.0 1097.0 COG3637@1|root,COG3637@2|Bacteria,4NE4Y@976|Bacteroidetes,2FP8W@200643|Bacteroidia,231SG@171551|Porphyromonadaceae 976|Bacteroidetes M SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_01367 435591.BDI_3674 3.53e-232 640.0 COG0609@1|root,COG0609@2|Bacteria,4NEDU@976|Bacteroidetes,2FNDK@200643|Bacteroidia,22WJI@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily - - - ko:K02015 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko02000 3.A.1.14 - - FecCD LIIFOLDO_01368 435591.BDI_3675 2.16e-238 655.0 COG1120@1|root,COG1120@2|Bacteria,4NG1Q@976|Bacteroidetes,2FMCI@200643|Bacteroidia,22WS6@171551|Porphyromonadaceae 976|Bacteroidetes HP ATP-binding protein - - 3.6.3.34 ko:K02013 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.14 - - ABC_tran LIIFOLDO_01369 435591.BDI_3676 5.26e-314 856.0 COG0534@1|root,COG0534@2|Bacteria,4NDUF@976|Bacteroidetes,2FMX6@200643|Bacteroidia,22WP6@171551|Porphyromonadaceae 976|Bacteroidetes V Multidrug transporter MatE - - - - - - - - - - - - MatE LIIFOLDO_01370 435591.BDI_3677 1.53e-114 331.0 2924H@1|root,2ZPPH@2|Bacteria,4NNST@976|Bacteroidetes,2FR7C@200643|Bacteroidia,22YFV@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4251) - - - - - - - - - - - - DUF4251 LIIFOLDO_01371 435591.BDI_3678 0.0 1082.0 COG1435@1|root,COG1435@2|Bacteria,4PMQ9@976|Bacteroidetes,2G0KQ@200643|Bacteroidia,23252@171551|Porphyromonadaceae 976|Bacteroidetes F Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_01372 435591.BDI_3679 0.0 2028.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia,22XE6@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_01375 435591.BDI_3680 8.05e-88 258.0 COG0234@1|root,COG0234@2|Bacteria,4NRE1@976|Bacteroidetes,2FTDY@200643|Bacteroidia,230V1@171551|Porphyromonadaceae 976|Bacteroidetes O Chaperonin 10 Kd subunit - - - - - - - - - - - - Cpn10 LIIFOLDO_01376 435591.BDI_3681 3.98e-187 520.0 COG0543@1|root,COG0543@2|Bacteria,4NJ0I@976|Bacteroidetes,2FNBW@200643|Bacteroidia,22WH8@171551|Porphyromonadaceae 976|Bacteroidetes C Ferredoxin-NADP reductase gltD - 1.18.1.2,1.19.1.1 ko:K00528 - - R10159 - ko00000,ko01000 - - - DHODB_Fe-S_bind,FAD_binding_6,NAD_binding_1 LIIFOLDO_01377 435591.BDI_3682 0.0 946.0 COG0493@1|root,COG0493@2|Bacteria,4NG9R@976|Bacteroidetes,2FMJF@200643|Bacteroidia,22XDN@171551|Porphyromonadaceae 976|Bacteroidetes E catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation gltA - 1.3.1.1,1.4.1.13,1.4.1.14 ko:K00266,ko:K17722 ko00240,ko00250,ko00410,ko00770,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00240,map00250,map00410,map00770,map00910,map01100,map01110,map01120,map01130,map01230 M00046 R00093,R00114,R00248,R00977,R01414,R11026 RC00006,RC00010,RC00072,RC00123,RC02799 ko00000,ko00001,ko00002,ko01000 - - - DHODB_Fe-S_bind,FAD_binding_6,Fer4_20,NAD_binding_1,Pyr_redox_2 LIIFOLDO_01378 435591.BDI_3683 6.39e-89 260.0 2CP0Z@1|root,32SI8@2|Bacteria,4NQDB@976|Bacteroidetes,2FSIV@200643|Bacteroidia,22Y7G@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3037) - - - - - - - - - - - - DUF3037 LIIFOLDO_01379 435591.BDI_3684 2.32e-188 523.0 COG1718@1|root,COG1718@2|Bacteria,4NEF6@976|Bacteroidetes,2FQ2B@200643|Bacteroidia,22WD8@171551|Porphyromonadaceae 976|Bacteroidetes DT aminotransferase class I and II - - - - - - - - - - - - - LIIFOLDO_01380 435591.BDI_2332 1.1e-186 542.0 COG3537@1|root,COG3537@2|Bacteria,4NDYB@976|Bacteroidetes,2FMMF@200643|Bacteroidia,22XE8@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 LIIFOLDO_01381 435591.BDI_2331 1.1e-174 487.0 COG0204@1|root,COG0204@2|Bacteria,4NG5R@976|Bacteroidetes,2FMJG@200643|Bacteroidia,22XRW@171551|Porphyromonadaceae 976|Bacteroidetes I Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family plsC - 2.3.1.51 ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R02241,R09381 RC00004,RC00037,RC00039 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Acyltransferase LIIFOLDO_01382 435591.BDI_2330 0.0 1027.0 2C95T@1|root,2Z7NG@2|Bacteria,4NGVW@976|Bacteroidetes,2G2HY@200643|Bacteroidia,22XWJ@171551|Porphyromonadaceae 976|Bacteroidetes S Capsule assembly protein Wzi - - - - - - - - - - - - Caps_assemb_Wzi LIIFOLDO_01383 435591.BDI_2329 1.61e-252 691.0 COG2267@1|root,COG2267@2|Bacteria,4NHI2@976|Bacteroidetes,2FNPW@200643|Bacteroidia,22WWI@171551|Porphyromonadaceae 976|Bacteroidetes I Alpha/beta hydrolase family - - - - - - - - - - - - Hydrolase_4 LIIFOLDO_01384 435591.BDI_2328 1.04e-177 495.0 COG3279@1|root,COG3279@2|Bacteria,4NFPV@976|Bacteroidetes,2FN7I@200643|Bacteroidia 976|Bacteroidetes T COG3279 Response regulator of the LytR AlgR family - - - ko:K02477 - - - - ko00000,ko02022 - - - LytTR,Response_reg LIIFOLDO_01385 435591.BDI_2327 3.25e-273 747.0 COG1672@1|root,COG1672@2|Bacteria,4NGM3@976|Bacteroidetes,2FM92@200643|Bacteroidia,22WPH@171551|Porphyromonadaceae 976|Bacteroidetes S ATPase domain predominantly from Archaea - - - - - - - - - - - - ATPase_2,LexA_DNA_bind LIIFOLDO_01386 435591.BDI_2326 3.05e-152 427.0 COG0317@1|root,COG0317@2|Bacteria,4NTFT@976|Bacteroidetes,2FYX8@200643|Bacteroidia 976|Bacteroidetes KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance - - - - - - - - - - - - - LIIFOLDO_01387 435591.BDI_2325 1.92e-133 379.0 COG1595@1|root,COG1595@2|Bacteria,4NQBD@976|Bacteroidetes,2FNST@200643|Bacteroidia,22YAU@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 LIIFOLDO_01388 435591.BDI_2324 2.22e-232 640.0 COG3712@1|root,COG3712@2|Bacteria,4NHHS@976|Bacteroidetes,2FPTU@200643|Bacteroidia,22XT0@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR LIIFOLDO_01389 435591.BDI_2323 0.0 2187.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec LIIFOLDO_01390 435591.BDI_2322 0.0 1049.0 COG1435@1|root,COG1435@2|Bacteria,4PKTN@976|Bacteroidetes,2G049@200643|Bacteroidia 976|Bacteroidetes F SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_01391 435591.BDI_2321 0.0 979.0 COG3119@1|root,COG3119@2|Bacteria,4NFRB@976|Bacteroidetes,2FQ3G@200643|Bacteroidia 976|Bacteroidetes P Arylsulfatase - - 3.1.6.1 ko:K01130 ko00140,ko00600,map00140,map00600 - R03980,R04856 RC00128,RC00231 ko00000,ko00001,ko01000 - - - Sulfatase,Sulfatase_C LIIFOLDO_01392 435591.BDI_2320 0.0 933.0 COG3119@1|root,COG3119@2|Bacteria,4NFRB@976|Bacteroidetes,2FQ3G@200643|Bacteroidia 976|Bacteroidetes P Arylsulfatase - - 3.1.6.1 ko:K01130 ko00140,ko00600,map00140,map00600 - R03980,R04856 RC00128,RC00231 ko00000,ko00001,ko01000 - - - Sulfatase,Sulfatase_C LIIFOLDO_01393 435591.BDI_2319 0.0 916.0 COG3119@1|root,COG3119@2|Bacteria,4NEPB@976|Bacteroidetes,2FS4E@200643|Bacteroidia 976|Bacteroidetes P COG COG3119 Arylsulfatase A and related enzymes - - - - - - - - - - - - Sulfatase LIIFOLDO_01394 435591.BDI_2318 8.7e-114 331.0 COG1595@1|root,COG1595@2|Bacteria,4NVCP@976|Bacteroidetes,2FRBB@200643|Bacteroidia 976|Bacteroidetes K RNA polymerase sigma-70 factor, ECF subfamily - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 LIIFOLDO_01395 435591.BDI_2317 5.66e-174 494.0 COG3712@1|root,COG3712@2|Bacteria,4NJBJ@976|Bacteroidetes,2FQUN@200643|Bacteroidia 976|Bacteroidetes PT Sigma factor regulatory protein, FecR PupR family - - - - - - - - - - - - DUF4974,FecR LIIFOLDO_01396 272559.BF9343_1143 0.0 1034.0 COG1629@1|root,COG4774@1|root,COG1629@2|Bacteria,COG4774@2|Bacteria,4PKAS@976|Bacteroidetes,2FWM7@200643|Bacteroidia,4AWE8@815|Bacteroidaceae 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec LIIFOLDO_01397 1089547.KB913013_gene406 8.76e-175 508.0 COG0521@1|root,COG0521@2|Bacteria,4NG3I@976|Bacteroidetes,47JEA@768503|Cytophagia 976|Bacteroidetes H Starch-binding associating with outer membrane - - - - - - - - - - - - SusD-like_2 LIIFOLDO_01398 435591.BDI_2313 3.14e-232 641.0 COG3147@1|root,COG3147@2|Bacteria,4PKTI@976|Bacteroidetes,2FQ1W@200643|Bacteroidia,22YHW@171551|Porphyromonadaceae 976|Bacteroidetes S Sporulation and cell division repeat protein - - - - - - - - - - - - SPOR LIIFOLDO_01399 999419.HMPREF1077_02450 8.48e-28 101.0 COG4877@1|root,COG4877@2|Bacteria,4NXSU@976|Bacteroidetes,2FUU4@200643|Bacteroidia,22YTT@171551|Porphyromonadaceae 976|Bacteroidetes S Arc-like DNA binding domain - - - - - - - - - - - - Arc,RHH_5 LIIFOLDO_01400 435591.BDI_2312 1.02e-210 584.0 COG0330@1|root,COG0330@2|Bacteria,4NEBV@976|Bacteroidetes,2FPV3@200643|Bacteroidia,22WRS@171551|Porphyromonadaceae 976|Bacteroidetes O prohibitin homologues - - - - - - - - - - - - Band_7 LIIFOLDO_01401 435591.BDI_2311 0.0 1187.0 COG0457@1|root,COG0507@1|root,COG0457@2|Bacteria,COG0507@2|Bacteria,4NF6J@976|Bacteroidetes,2FM19@200643|Bacteroidia,22X68@171551|Porphyromonadaceae 976|Bacteroidetes L COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member - - - - - - - - - - - - Herpes_Helicase,PIF1,TPR_16,TPR_2,TPR_8 LIIFOLDO_01402 435591.BDI_2310 1.39e-156 469.0 COG1629@1|root,COG4771@2|Bacteria,4NF66@976|Bacteroidetes,2FKYY@200643|Bacteroidia,22X50@171551|Porphyromonadaceae 976|Bacteroidetes P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarboxypepD_reg,TonB_dep_Rec LIIFOLDO_01403 435591.BDI_2310 0.0 1731.0 COG1629@1|root,COG4771@2|Bacteria,4NF66@976|Bacteroidetes,2FKYY@200643|Bacteroidia,22X50@171551|Porphyromonadaceae 976|Bacteroidetes P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarboxypepD_reg,TonB_dep_Rec LIIFOLDO_01404 525919.Apre_1267 1.41e-120 363.0 COG0438@1|root,COG0438@2|Bacteria,1V2I8@1239|Firmicutes,24ICP@186801|Clostridia 186801|Clostridia M PFAM Glycosyl transferase, group 1 - - - - - - - - - - - - Glycos_transf_1 LIIFOLDO_01405 478749.BRYFOR_09350 1.28e-157 456.0 COG0151@1|root,COG0151@2|Bacteria,1TRZ2@1239|Firmicutes,2497Y@186801|Clostridia 186801|Clostridia F ATP-grasp domain - - - - - - - - - - - - ATP-grasp_4,GARS_A LIIFOLDO_01406 1123075.AUDP01000039_gene187 3.39e-88 265.0 COG2148@1|root,COG2148@2|Bacteria,1TP7M@1239|Firmicutes,24870@186801|Clostridia,3WHG7@541000|Ruminococcaceae 186801|Clostridia M sugar transferase - - - - - - - - - - - - Bac_transf,CoA_binding_3 LIIFOLDO_01407 1123075.AUDP01000039_gene188 2.14e-156 453.0 COG0151@1|root,COG0151@2|Bacteria,1UINU@1239|Firmicutes 1239|Firmicutes F Psort location Cytoplasmic, score 8.87 - - - - - - - - - - - - ATP-grasp_4,CPSase_L_D2,GARS_A LIIFOLDO_01408 1235803.C825_04225 8.39e-238 659.0 COG0399@1|root,COG0399@2|Bacteria,4NFQ8@976|Bacteroidetes,2FMKJ@200643|Bacteroidia,22ZHY@171551|Porphyromonadaceae 976|Bacteroidetes E DegT/DnrJ/EryC1/StrS aminotransferase family - - 2.6.1.59 ko:K02805 - - - - ko00000,ko01000,ko01007 - - - DegT_DnrJ_EryC1 LIIFOLDO_01409 435591.BDI_0446 1.68e-253 695.0 28HHD@1|root,2Z7T3@2|Bacteria,4NGWB@976|Bacteroidetes,2FQ08@200643|Bacteroidia,22Y4U@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3810) - - - - - - - - - - - - DUF3810 LIIFOLDO_01410 435591.BDI_0447 0.0 1510.0 COG3345@1|root,COG3345@2|Bacteria,4NJNN@976|Bacteroidetes,2G2YR@200643|Bacteroidia,231KA@171551|Porphyromonadaceae 976|Bacteroidetes G Melibiase aglC - 3.2.1.22 ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 - R01101,R01103,R01104,R01194,R01329,R02926,R03634,R04019,R04470,R05549,R05961,R06091 RC00049,RC00059,RC00451 ko00000,ko00001,ko01000 - - - Glyco_hydro_36C,Glyco_hydro_36N,Melibiase LIIFOLDO_01411 435591.BDI_0448 0.0 2328.0 COG0060@1|root,COG0060@2|Bacteria,4NEYT@976|Bacteroidetes,2FM5R@200643|Bacteroidia,22W3E@171551|Porphyromonadaceae 976|Bacteroidetes J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) ileS GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 ko:K01870 ko00970,map00970 M00359,M00360 R03656 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Anticodon_1,tRNA-synt_1 LIIFOLDO_01412 435591.BDI_0449 4.17e-80 238.0 COG1734@1|root,COG1734@2|Bacteria,4NNID@976|Bacteroidetes,2FSI2@200643|Bacteroidia,22XWH@171551|Porphyromonadaceae 976|Bacteroidetes T Molecular chaperone DnaK yocK - - - - - - - - - - - zf-dskA_traR LIIFOLDO_01413 435591.BDI_0450 3.32e-147 414.0 COG0597@1|root,COG0597@2|Bacteria,4NEZN@976|Bacteroidetes,2FS30@200643|Bacteroidia,22XTH@171551|Porphyromonadaceae 976|Bacteroidetes MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins lspA - 3.4.23.36 ko:K03101 ko03060,map03060 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_A8 LIIFOLDO_01414 435591.BDI_0451 8.16e-178 496.0 2EK3P@1|root,33DU3@2|Bacteria,4NU68@976|Bacteroidetes,2FMUD@200643|Bacteroidia,22YCH@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4296) - - - - - - - - - - - - DUF4296 LIIFOLDO_01416 435591.BDI_0452 3.99e-182 506.0 COG0566@1|root,COG0566@2|Bacteria,4NG1U@976|Bacteroidetes,2FNE2@200643|Bacteroidia,22WK6@171551|Porphyromonadaceae 976|Bacteroidetes J RNA methyltransferase aviRb - - ko:K03437 - - - - ko00000,ko03016 - - - SpoU_methylase,SpoU_sub_bind LIIFOLDO_01417 435591.BDI_0453 0.0 1584.0 COG4775@1|root,COG4775@2|Bacteria,4NE80@976|Bacteroidetes,2FM1J@200643|Bacteroidia,22WAY@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane protein, OMP85 family - - - - - - - - - - - - Bac_surface_Ag,POTRA LIIFOLDO_01419 742727.HMPREF9447_04802 1.19e-152 442.0 COG4974@1|root,COG4974@2|Bacteria,4P0QU@976|Bacteroidetes,2FSJG@200643|Bacteroidia,4AR0X@815|Bacteroidaceae 976|Bacteroidetes L Arm DNA-binding domain - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase LIIFOLDO_01422 908937.Prede_2356 4.05e-16 74.3 2CAWQ@1|root,33AP4@2|Bacteria,4NXQ3@976|Bacteroidetes,2FVZU@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01425 1347393.HG726020_gene1834 2.07e-202 706.0 COG0454@1|root,COG0553@1|root,COG0827@1|root,COG0456@2|Bacteria,COG0553@2|Bacteria,COG0827@2|Bacteria,4NZK9@976|Bacteroidetes,2FRRF@200643|Bacteroidia,4APRR@815|Bacteroidaceae 976|Bacteroidetes KL CRISPR-associated helicase, Cas3 - - - - - - - - - - - - - LIIFOLDO_01426 435591.BDI_2262 1.86e-85 257.0 COG3568@1|root,COG3568@2|Bacteria,4NHXV@976|Bacteroidetes,2FNR3@200643|Bacteroidia,22X95@171551|Porphyromonadaceae 976|Bacteroidetes S Endonuclease/Exonuclease/phosphatase family - - - - - - - - - - - - Exo_endo_phos LIIFOLDO_01427 435591.BDI_2261 1.86e-211 584.0 COG2207@1|root,COG2207@2|Bacteria,4NEVG@976|Bacteroidetes,2FN82@200643|Bacteroidia,22WI8@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix, arabinose operon control protein - - - - - - - - - - - - AraC_binding,HTH_18 LIIFOLDO_01428 435591.BDI_2260 3.63e-66 201.0 COG4191@1|root,COG4191@2|Bacteria,4NSNP@976|Bacteroidetes,2FTSX@200643|Bacteroidia,22YDJ@171551|Porphyromonadaceae 976|Bacteroidetes T Protein of unknown function (DUF3467) - - - - - - - - - - - - DUF3467 LIIFOLDO_01429 435591.BDI_2259 7.76e-233 640.0 COG0078@1|root,COG0078@2|Bacteria,4NEYX@976|Bacteroidetes,2FNR9@200643|Bacteroidia,22WE0@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the ATCase OTCase family argF GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.11,2.1.3.9 ko:K09065,ko:K13043 ko00220,ko01100,ko01230,map00220,map01100,map01230 M00845 R07245,R08937 RC00096 ko00000,ko00001,ko00002,ko01000 - - - OTCace,OTCace_N LIIFOLDO_01430 435591.BDI_2258 0.0 978.0 COG0642@1|root,COG2205@2|Bacteria,4NDXU@976|Bacteroidetes,2FNIT@200643|Bacteroidia,22WZF@171551|Porphyromonadaceae 976|Bacteroidetes T PAS domain - - - - - - - - - - - - HATPase_c,HisKA,PAS_3,PAS_4,PAS_9,Response_reg LIIFOLDO_01431 435591.BDI_2257 1.75e-293 801.0 COG0014@1|root,COG0014@2|Bacteria,4NEPQ@976|Bacteroidetes,2FN24@200643|Bacteroidia,22WMQ@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate proA GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 ko:K00147 ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230 M00015 R03313 RC00684 ko00000,ko00001,ko00002,ko01000 - - - Aldedh LIIFOLDO_01432 435591.BDI_2256 1.39e-256 703.0 COG0263@1|root,COG0263@2|Bacteria,4NH75@976|Bacteroidetes,2FM31@200643|Bacteroidia,22WGI@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate proB GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 ko:K00931 ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230 M00015 R00239 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 - - - AA_kinase,PUA LIIFOLDO_01433 435591.BDI_2255 0.0 1130.0 COG0365@1|root,COG0365@2|Bacteria,4NEAD@976|Bacteroidetes,2FNEM@200643|Bacteroidia,22VYT@171551|Porphyromonadaceae 976|Bacteroidetes I AMP-binding enzyme C-terminal domain acsA - 6.2.1.1,6.2.1.32 ko:K01895,ko:K08295 ko00010,ko00620,ko00627,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00627,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200 M00357 R00235,R00236,R00316,R00926,R00982,R01354 RC00004,RC00012,RC00043,RC00070,RC00174,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000,ko01004 - - - AMP-binding,AMP-binding_C LIIFOLDO_01434 435591.BDI_2254 8.98e-128 363.0 COG1396@1|root,COG1917@1|root,COG1396@2|Bacteria,COG1917@2|Bacteria,4NNDM@976|Bacteroidetes,2FP7C@200643|Bacteroidia,22XSH@171551|Porphyromonadaceae 976|Bacteroidetes K Helix-turn-helix XRE-family like proteins - - - - - - - - - - - - Cupin_2,HTH_19,HTH_3,HTH_31 LIIFOLDO_01435 435591.BDI_2253 7.82e-161 449.0 COG3506@1|root,COG3506@2|Bacteria,4NH73@976|Bacteroidetes,2FNBY@200643|Bacteroidia,22X4C@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF1349) - - - ko:K09702 - - - - ko00000 - - - DUF1349 LIIFOLDO_01436 411477.PARMER_01290 8.27e-35 119.0 COG1141@1|root,COG1141@2|Bacteria,4P7D9@976|Bacteroidetes,2FZ83@200643|Bacteroidia 976|Bacteroidetes C 4Fe-4S single cluster domain of Ferredoxin I - - - - - - - - - - - - Fer4_13 LIIFOLDO_01437 435591.BDI_2252 0.0 1103.0 COG1012@1|root,COG1012@2|Bacteria,4NFTW@976|Bacteroidetes,2FQQ7@200643|Bacteroidia,22WBS@171551|Porphyromonadaceae 976|Bacteroidetes C 1-pyrroline-5-carboxylate dehydrogenase pruA - 1.2.1.88,1.5.5.2 ko:K00294,ko:K13821 ko00250,ko00330,ko01100,ko01110,ko01130,map00250,map00330,map01100,map01110,map01130 - R00245,R00707,R00708,R01253,R04444,R04445,R05051 RC00080,RC00083,RC00216,RC00242,RC00255 ko00000,ko00001,ko01000,ko03000 - - - Aldedh,Pro_dh LIIFOLDO_01438 435591.BDI_2251 1.45e-285 781.0 COG0506@1|root,COG0506@2|Bacteria,4NEH5@976|Bacteroidetes,2FRJ4@200643|Bacteroidia,22VZE@171551|Porphyromonadaceae 976|Bacteroidetes E Proline dehydrogenase - - - ko:K00318 ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130 - R10507 RC00083 ko00000,ko00001,ko01000 - - - Pro_dh LIIFOLDO_01439 435591.BDI_2250 3.37e-180 503.0 COG0345@1|root,COG0345@2|Bacteria,4NE6F@976|Bacteroidetes,2FMRG@200643|Bacteroidia,22WAW@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline proC - 1.5.1.2 ko:K00286 ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230 M00015 R01248,R01251,R03291,R03293 RC00054,RC00083 ko00000,ko00001,ko00002,ko01000 - - - F420_oxidored,P5CR_dimer LIIFOLDO_01440 435591.BDI_2249 1.57e-300 818.0 COG3579@1|root,COG3579@2|Bacteria,4NE02@976|Bacteroidetes,2FN7G@200643|Bacteroidia,22W1M@171551|Porphyromonadaceae 976|Bacteroidetes E aminopeptidase pepC - 3.4.22.40 ko:K01372 - - - - ko00000,ko01000,ko01002 - - - Peptidase_C1,Peptidase_C1_2 LIIFOLDO_01441 435591.BDI_2248 1.45e-136 387.0 COG3015@1|root,COG3015@2|Bacteria,4P5SI@976|Bacteroidetes 976|Bacteroidetes MP NlpE N-terminal domain - - - - - - - - - - - - NlpE LIIFOLDO_01442 435591.BDI_2247 0.0 1176.0 COG0668@1|root,COG0668@2|Bacteria,4NFC6@976|Bacteroidetes,2FP31@200643|Bacteroidia,22Z43@171551|Porphyromonadaceae 976|Bacteroidetes M Mechanosensitive ion channel - - - - - - - - - - - - MS_channel LIIFOLDO_01443 435591.BDI_2246 0.0 1542.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,4NETS@976|Bacteroidetes,2FRBH@200643|Bacteroidia,22ZE0@171551|Porphyromonadaceae 976|Bacteroidetes EU Dipeptidyl peptidase IV (DPP IV) N-terminal region - - 3.4.14.5 ko:K01278 ko04974,map04974 - - - ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 - - - DPPIV_N,Peptidase_S9 LIIFOLDO_01445 435591.BDI_2245 3.03e-116 333.0 COG0545@1|root,COG0545@2|Bacteria 2|Bacteria O Peptidyl-prolyl cis-trans isomerase - - 5.2.1.8 ko:K01802 - - - - ko00000,ko01000 - - - FKBP_C LIIFOLDO_01446 435591.BDI_2244 0.0 1320.0 COG1629@1|root,COG1629@2|Bacteria,4P2AA@976|Bacteroidetes,2FNFC@200643|Bacteroidia,23229@171551|Porphyromonadaceae 976|Bacteroidetes P Outer membrane protein beta-barrel family - - - - - - - - - - - - OMP_b-brl_3 LIIFOLDO_01447 435591.BDI_2199 1.17e-142 402.0 28PMV@1|root,2ZCAQ@2|Bacteria,4NMJQ@976|Bacteroidetes,2FM59@200643|Bacteroidia,22XUC@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG23385 non supervised orthologous group - - - - - - - - - - - - NTP_transf_2 LIIFOLDO_01448 435591.BDI_2198 0.0 1714.0 COG0474@1|root,COG0474@2|Bacteria,4NERM@976|Bacteroidetes,2FMEC@200643|Bacteroidia,22WNC@171551|Porphyromonadaceae 976|Bacteroidetes P Calcium-translocating P-type ATPase, PMCA-type - - 3.6.3.8 ko:K01537 - - - - ko00000,ko01000 3.A.3.2 - - Cation_ATPase,Cation_ATPase_C,Cation_ATPase_N,E1-E2_ATPase,Hydrolase,Hydrolase_3 LIIFOLDO_01449 435591.BDI_2197 1.55e-68 207.0 2ET8R@1|root,33KST@2|Bacteria,4NYBM@976|Bacteroidetes,2FVFI@200643|Bacteroidia,231AH@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01450 435591.BDI_2196 2.83e-237 652.0 COG1506@1|root,COG1506@2|Bacteria,4PKBT@976|Bacteroidetes,2FN53@200643|Bacteroidia,22XXY@171551|Porphyromonadaceae 976|Bacteroidetes E Carboxylesterase family - - - - - - - - - - - - Abhydrolase_3,COesterase LIIFOLDO_01451 435591.BDI_2195 3.22e-109 315.0 2E5XB@1|root,330M9@2|Bacteria,4NW0P@976|Bacteroidetes,2FS56@200643|Bacteroidia,22YPM@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4251) - - - - - - - - - - - - DUF4251 LIIFOLDO_01452 435591.BDI_2194 1.89e-227 625.0 COG1242@1|root,COG1242@2|Bacteria,4NGK6@976|Bacteroidetes,2FPR8@200643|Bacteroidia,22WQ2@171551|Porphyromonadaceae 976|Bacteroidetes S radical SAM protein - - - ko:K07139 - - - - ko00000 - - - Radical_SAM,Radical_SAM_C LIIFOLDO_01453 435591.BDI_2193 0.0 1464.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,4NETS@976|Bacteroidetes,2FNBA@200643|Bacteroidia,22WW6@171551|Porphyromonadaceae 976|Bacteroidetes EU Peptidase, S9A B C family, catalytic domain protein dpp - 3.4.14.5 ko:K01278 ko04974,map04974 - - - ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 - - - DPPIV_N,Peptidase_S9 LIIFOLDO_01454 435591.BDI_2192 1.47e-206 570.0 COG0320@1|root,COG0320@2|Bacteria,4NEB5@976|Bacteroidetes,2FNBV@200643|Bacteroidia,22W8Q@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives lipA GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 ko:K03644 ko00785,ko01100,map00785,map01100 - R07767,R07768 RC01978 ko00000,ko00001,ko01000 - - - BPL_LplA_LipB,Lip_prot_lig_C,Radical_SAM LIIFOLDO_01455 435591.BDI_1788 1.35e-202 560.0 COG0657@1|root,COG0657@2|Bacteria,4NHDX@976|Bacteroidetes,2FP2B@200643|Bacteroidia,22VVK@171551|Porphyromonadaceae 976|Bacteroidetes I Carboxylesterase family - - - - - - - - - - - - Abhydrolase_3,COesterase LIIFOLDO_01456 435591.BDI_1787 0.0 983.0 COG5520@1|root,COG5520@2|Bacteria,4NF4C@976|Bacteroidetes,2FNPT@200643|Bacteroidia,22W35@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the glycosyl hydrolase 30 family - - 3.2.1.45 ko:K01201 ko00511,ko00600,ko01100,ko04142,map00511,map00600,map01100,map04142 - R01498 RC00059,RC00451 ko00000,ko00001,ko01000 - GH30 - Glyco_hydro_30,Glyco_hydro_30C LIIFOLDO_01457 435591.BDI_1786 0.0 1050.0 COG0845@1|root,COG2608@1|root,COG0845@2|Bacteria,COG2608@2|Bacteria,4NG8S@976|Bacteroidetes,2FMQN@200643|Bacteroidia,22X6K@171551|Porphyromonadaceae 976|Bacteroidetes MP Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K07798 ko02020,map02020 - - - ko00000,ko00001,ko02000 2.A.6.1.4,8.A.1 - - DUF3347,HMA,HlyD_D23 LIIFOLDO_01458 435591.BDI_1785 1.18e-303 834.0 COG1538@1|root,COG1538@2|Bacteria,4NDXW@976|Bacteroidetes,2FN4C@200643|Bacteroidia,22XHC@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - - - - - - - - - - OEP LIIFOLDO_01459 435591.BDI_1784 0.0 2394.0 COG3696@1|root,COG3696@2|Bacteria,4P36A@976|Bacteroidetes,2FQUJ@200643|Bacteroidia,22VWA@171551|Porphyromonadaceae 976|Bacteroidetes P AcrB/AcrD/AcrF family - - - ko:K07787,ko:K15726 ko02020,map02020 - - - ko00000,ko00001,ko02000 2.A.6.1.2,2.A.6.1.4 - - ACR_tran LIIFOLDO_01460 435591.BDI_1783 8.37e-87 255.0 2ACE7@1|root,311ZQ@2|Bacteria,4PGUK@976|Bacteroidetes,2FYXK@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01461 435591.BDI_1782 4.13e-314 855.0 COG2911@1|root,COG2911@2|Bacteria,4NHAF@976|Bacteroidetes,2FMVP@200643|Bacteroidia,22WVX@171551|Porphyromonadaceae 976|Bacteroidetes S Porin subfamily - - - - - - - - - - - - Porin_2 LIIFOLDO_01462 435591.BDI_1781 0.0 1016.0 COG0038@1|root,COG0038@2|Bacteria,4NUDN@976|Bacteroidetes,2G2Y4@200643|Bacteroidia 976|Bacteroidetes P ATP synthase F0, A subunit - - - - - - - - - - - - TrkA_C,Voltage_CLC LIIFOLDO_01463 435591.BDI_1780 1.03e-246 676.0 COG5504@1|root,COG5504@2|Bacteria,4NFZP@976|Bacteroidetes,2FMM9@200643|Bacteroidia,22XXR@171551|Porphyromonadaceae 976|Bacteroidetes O Psort location Cytoplasmic, score 8.96 gldB - - - - - - - - - - - - LIIFOLDO_01464 435591.BDI_1779 1.28e-310 847.0 COG0534@1|root,COG0534@2|Bacteria,4NFIR@976|Bacteroidetes,2FMSA@200643|Bacteroidia,22X5G@171551|Porphyromonadaceae 976|Bacteroidetes V COG0534 Na -driven multidrug efflux pump - - - - - - - - - - - - MatE LIIFOLDO_01465 435591.BDI_1778 2.29e-275 752.0 COG0470@1|root,COG0470@2|Bacteria,4NEYF@976|Bacteroidetes,2FPCQ@200643|Bacteroidia,22VVP@171551|Porphyromonadaceae 976|Bacteroidetes L DNA polymerase III holB - 2.7.7.7 ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_delta2 LIIFOLDO_01466 435591.BDI_1777 4.51e-235 645.0 COG0685@1|root,COG0685@2|Bacteria,4NDY0@976|Bacteroidetes,2FMPC@200643|Bacteroidia,22X3N@171551|Porphyromonadaceae 976|Bacteroidetes C Methylenetetrahydrofolate reductase metF - 1.5.1.20 ko:K00297 ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523 M00377 R01224,R07168 RC00081 ko00000,ko00001,ko00002,ko01000 - - - MTHFR LIIFOLDO_01467 435591.BDI_1776 0.0 2145.0 COG1112@1|root,COG1112@2|Bacteria,4NHKK@976|Bacteroidetes,2G315@200643|Bacteroidia 976|Bacteroidetes L AAA domain - - - - - - - - - - - - AAA_11,AAA_12 LIIFOLDO_01468 435591.BDI_1775 6.31e-253 692.0 COG0115@1|root,COG0115@2|Bacteria,4NEJY@976|Bacteroidetes,2FMPE@200643|Bacteroidia,22XCN@171551|Porphyromonadaceae 976|Bacteroidetes EH Branched-chain amino acid aminotransferase ilvE - 2.6.1.42 ko:K00826 ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00036,M00119,M00570 R01090,R01214,R02199,R10991 RC00006,RC00036 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_4 LIIFOLDO_01469 435591.BDI_1774 3.76e-290 791.0 COG1373@1|root,COG1373@2|Bacteria,4NE3E@976|Bacteroidetes,2FQ28@200643|Bacteroidia,22W5Q@171551|Porphyromonadaceae 976|Bacteroidetes S ATPase (AAA - - - ko:K07133 - - - - ko00000 - - - AAA_14 LIIFOLDO_01470 999419.HMPREF1077_02570 0.0 2258.0 COG0674@1|root,COG1013@1|root,COG1014@1|root,COG1143@1|root,COG0674@2|Bacteria,COG1013@2|Bacteria,COG1014@2|Bacteria,COG1143@2|Bacteria,4NF4F@976|Bacteroidetes,2FKZU@200643|Bacteroidia,22WF0@171551|Porphyromonadaceae 976|Bacteroidetes C Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin nifJ - 1.2.7.1 ko:K03737 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00173,M00307 R01196,R10866 RC00004,RC02742 br01601,ko00000,ko00001,ko00002,ko01000 - - - EKR,Fer4_16,Fer4_7,PFOR_II,POR,POR_N,TPP_enzyme_C LIIFOLDO_01471 435591.BDI_1771 1.21e-289 790.0 COG3637@1|root,COG3637@2|Bacteria,4NGSV@976|Bacteroidetes,2FQ5B@200643|Bacteroidia,22ZMW@171551|Porphyromonadaceae 976|Bacteroidetes M Phosphate-selective porin O and P - - - - - - - - - - - - Porin_O_P LIIFOLDO_01472 435591.BDI_1770 3.4e-255 699.0 COG0667@1|root,COG0667@2|Bacteria,4NEDK@976|Bacteroidetes,2FPUT@200643|Bacteroidia,22X7V@171551|Porphyromonadaceae 976|Bacteroidetes C Aldo/keto reductase family - - - - - - - - - - - - Aldo_ket_red LIIFOLDO_01473 435591.BDI_1769 2.82e-188 522.0 COG0561@1|root,COG0561@2|Bacteria,4NEG2@976|Bacteroidetes,2FMS2@200643|Bacteroidia,22WX9@171551|Porphyromonadaceae 976|Bacteroidetes S Sucrose-6F-phosphate phosphohydrolase - - - - - - - - - - - - Hydrolase_3 LIIFOLDO_01474 435591.BDI_1768 1.56e-126 360.0 COG0288@1|root,COG0288@2|Bacteria,4NW0D@976|Bacteroidetes,2FPAT@200643|Bacteroidia,230GS@171551|Porphyromonadaceae 976|Bacteroidetes P Reversible hydration of carbon dioxide cah - 4.2.1.1 ko:K01673 ko00910,map00910 - R00132,R10092 RC02807 ko00000,ko00001,ko01000 - - - Pro_CA LIIFOLDO_01476 435591.BDI_1767 1.28e-253 694.0 COG2234@1|root,COG2234@2|Bacteria,4NFDJ@976|Bacteroidetes,2FQ2M@200643|Bacteroidia,22XAT@171551|Porphyromonadaceae 976|Bacteroidetes S Peptidase family M28 - - - - - - - - - - - - Peptidase_M28 LIIFOLDO_01477 435591.BDI_1686 8.48e-129 368.0 COG1595@1|root,COG1595@2|Bacteria,4NMRG@976|Bacteroidetes,2FQSC@200643|Bacteroidia,22YUA@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 LIIFOLDO_01478 435591.BDI_1685 0.0 1233.0 COG0457@1|root,COG0457@2|Bacteria,4P4TG@976|Bacteroidetes,2FX8R@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function (DUF5107) - - - - - - - - - - - - DUF5107 LIIFOLDO_01479 435591.BDI_1684 0.0 1281.0 COG3934@1|root,COG3934@2|Bacteria,4NF13@976|Bacteroidetes,2FNPI@200643|Bacteroidia,22X47@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of unknown function (DUF4091) - - - - - - - - - - - - DUF4091 LIIFOLDO_01480 435591.BDI_1683 0.0 1095.0 COG0457@1|root,COG0457@2|Bacteria,4NDX0@976|Bacteroidetes,2FM6J@200643|Bacteroidia 976|Bacteroidetes S SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_01481 435591.BDI_1682 0.0 2258.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec LIIFOLDO_01482 435591.BDI_1681 1.35e-237 654.0 COG3712@1|root,COG3712@2|Bacteria,4NNC8@976|Bacteroidetes,2FQC0@200643|Bacteroidia,2307N@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR LIIFOLDO_01483 435591.BDI_1680 5.23e-125 356.0 COG1595@1|root,COG1595@2|Bacteria,4NVAJ@976|Bacteroidetes,2FP8X@200643|Bacteroidia,22YDG@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 LIIFOLDO_01484 435591.BDI_1679 4.9e-145 409.0 COG0776@1|root,COG0776@2|Bacteria,4P464@976|Bacteroidetes,2FPYE@200643|Bacteroidia 976|Bacteroidetes L DNA-binding protein - - - - - - - - - - - - Bac_DNA_binding LIIFOLDO_01486 435591.BDI_1678 1.56e-229 632.0 COG3712@1|root,COG3712@2|Bacteria,4NH3M@976|Bacteroidetes,2FXMX@200643|Bacteroidia 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR LIIFOLDO_01487 435591.BDI_1677 0.0 2154.0 COG1629@1|root,COG4206@1|root,COG1629@2|Bacteria,COG4206@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec LIIFOLDO_01488 435591.BDI_1676 0.0 1015.0 COG1435@1|root,COG1435@2|Bacteria,4NFWU@976|Bacteroidetes,2FNY3@200643|Bacteroidia,22XJ7@171551|Porphyromonadaceae 976|Bacteroidetes F SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_01489 435591.BDI_1675 0.0 988.0 COG3119@1|root,COG3119@2|Bacteria,4NFRB@976|Bacteroidetes,2FQ3G@200643|Bacteroidia,22Z4W@171551|Porphyromonadaceae 976|Bacteroidetes P C-terminal region of aryl-sulfatase - - 3.1.6.1 ko:K01130 ko00140,ko00600,map00140,map00600 - R03980,R04856 RC00128,RC00231 ko00000,ko00001,ko01000 - - - Sulfatase,Sulfatase_C LIIFOLDO_01490 435591.BDI_1674 0.0 1117.0 COG3119@1|root,COG3119@2|Bacteria,4NHH7@976|Bacteroidetes,2FPC0@200643|Bacteroidia,23030@171551|Porphyromonadaceae 976|Bacteroidetes P Domain of unknown function (DUF4976) - - - - - - - - - - - - DUF4976,Sulfatase LIIFOLDO_01492 435591.BDI_1673 7.09e-278 758.0 COG4833@1|root,COG4833@2|Bacteria,4NEI3@976|Bacteroidetes 976|Bacteroidetes G Glycosyl hydrolase - - - - - - - - - - - - Glyco_hydro_76 LIIFOLDO_01493 435591.BDI_1672 4.35e-239 655.0 COG1524@1|root,COG1524@2|Bacteria,4NIUS@976|Bacteroidetes,2FP4Q@200643|Bacteroidia 976|Bacteroidetes S Metalloenzyme superfamily - - - - - - - - - - - - CHB_HEX_C_1,Fn3_assoc,PA14,Phosphodiest LIIFOLDO_01494 435591.BDI_1671 1.69e-229 630.0 COG3568@1|root,COG3568@2|Bacteria,4NHXV@976|Bacteroidetes,2FNR3@200643|Bacteroidia,22W59@171551|Porphyromonadaceae 976|Bacteroidetes S Endonuclease/Exonuclease/phosphatase family - - - - - - - - - - - - Exo_endo_phos LIIFOLDO_01495 435591.BDI_1670 0.0 1038.0 COG5016@1|root,COG5016@2|Bacteria,4PKTH@976|Bacteroidetes,2G35Q@200643|Bacteroidia,22WXX@171551|Porphyromonadaceae 976|Bacteroidetes C Conserved carboxylase domain - - 4.1.1.3,6.4.1.1 ko:K01571,ko:K01960 ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230 M00173,M00620 R00217,R00344 RC00040,RC00367 ko00000,ko00001,ko00002,ko01000,ko02000 3.B.1.1.1 - - Biotin_lipoyl,Biotin_lipoyl_2,HMGL-like,PYC_OADA LIIFOLDO_01496 435591.BDI_1669 3.96e-102 295.0 COG0698@1|root,COG0698@2|Bacteria,4NNSU@976|Bacteroidetes,2FT1X@200643|Bacteroidia,22XV0@171551|Porphyromonadaceae 976|Bacteroidetes G Ribose 5-phosphate isomerase rpiB - 5.3.1.6 ko:K01808 ko00030,ko00051,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007,M00165,M00167 R01056,R09030 RC00376,RC00434 ko00000,ko00001,ko00002,ko01000 - - - LacAB_rpiB LIIFOLDO_01497 435591.BDI_1668 0.0 1323.0 COG0021@1|root,COG0021@2|Bacteria,4P14U@976|Bacteroidetes,2FN0P@200643|Bacteroidia,22WF7@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the transketolase family tkt - 2.2.1.1 ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007,M00165,M00167 R01067,R01641,R01830,R06590 RC00032,RC00226,RC00571,RC01560 ko00000,ko00001,ko00002,ko01000 - - - Transket_pyr,Transketolase_C,Transketolase_N LIIFOLDO_01498 435591.BDI_1667 1.56e-162 455.0 COG1051@1|root,COG1051@2|Bacteria,4NE29@976|Bacteroidetes,2G31G@200643|Bacteroidia,22X8R@171551|Porphyromonadaceae 976|Bacteroidetes F NUDIX domain - - - - - - - - - - - - NUDIX LIIFOLDO_01499 435591.BDI_1666 5.25e-280 764.0 COG0153@1|root,COG0153@2|Bacteria,4NE0C@976|Bacteroidetes,2FNGC@200643|Bacteroidia,22WKE@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the GHMP kinase family. GalK subfamily galK - 2.7.1.6 ko:K00849 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00554,M00632 R01092 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000,ko04147 - - - GHMP_kinases_C,GHMP_kinases_N,GalKase_gal_bdg LIIFOLDO_01500 435591.BDI_1665 9.45e-298 813.0 COG0738@1|root,COG0738@2|Bacteria,4NEPI@976|Bacteroidetes,2FP0B@200643|Bacteroidia,22X1V@171551|Porphyromonadaceae 976|Bacteroidetes G Major Facilitator gluP - - ko:K02429 - - - - ko00000,ko02000 2.A.1.7 - - MFS_1 LIIFOLDO_01501 435591.BDI_0455 7.23e-66 200.0 COG3118@1|root,COG3118@2|Bacteria,4NS6N@976|Bacteroidetes,2FT3Z@200643|Bacteroidia,2324J@171551|Porphyromonadaceae 976|Bacteroidetes O Thioredoxin - - - ko:K03671 ko04621,ko05418,map04621,map05418 - - - ko00000,ko00001,ko03110 - - - Thioredoxin LIIFOLDO_01502 435591.BDI_0456 0.0 1013.0 COG1288@1|root,COG1288@2|Bacteria,4NEUI@976|Bacteroidetes,2FQKK@200643|Bacteroidia,22WMH@171551|Porphyromonadaceae 976|Bacteroidetes S AbgT putative transporter family - - - - - - - - - - - - DcuC LIIFOLDO_01503 435591.BDI_0457 3.12e-275 756.0 COG1322@1|root,COG1322@2|Bacteria,4NE04@976|Bacteroidetes,2FQ56@200643|Bacteroidia,22XDQ@171551|Porphyromonadaceae 976|Bacteroidetes S RmuC family rmuC - - ko:K09760 - - - - ko00000 - - - RmuC LIIFOLDO_01504 435591.BDI_0458 4.68e-115 331.0 COG2077@1|root,COG2077@2|Bacteria,4NNGR@976|Bacteroidetes,2FSI3@200643|Bacteroidia,22XVV@171551|Porphyromonadaceae 976|Bacteroidetes O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides tpx - 1.11.1.15 ko:K11065 - - - - ko00000,ko01000 - - - Redoxin LIIFOLDO_01505 435591.BDI_0459 4.17e-280 767.0 COG0477@1|root,COG2814@2|Bacteria,4NGAV@976|Bacteroidetes,2G0JU@200643|Bacteroidia,22WHM@171551|Porphyromonadaceae 976|Bacteroidetes EGP Transmembrane secretion effector - - - ko:K08217 - - - - br01600,ko00000,ko01504,ko02000 2.A.1.21.1,2.A.1.21.22 - - MFS_1,MFS_3 LIIFOLDO_01506 435591.BDI_0460 9.99e-306 833.0 COG0534@1|root,COG0534@2|Bacteria,4NG7Q@976|Bacteroidetes,2FN68@200643|Bacteroidia,22WPA@171551|Porphyromonadaceae 976|Bacteroidetes V Mate efflux family protein dinF - - ko:K03327 - - - - ko00000,ko02000 2.A.66.1 - - MatE LIIFOLDO_01507 435591.BDI_0461 0.0 1126.0 COG1960@1|root,COG1960@2|Bacteria,4NEHA@976|Bacteroidetes,2FM28@200643|Bacteroidia,22W9A@171551|Porphyromonadaceae 976|Bacteroidetes C acyl-CoA dehydrogenase acd - - - - - - - - - - - Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N,AcylCoA_dehyd_C LIIFOLDO_01508 435591.BDI_0462 3.09e-244 671.0 COG2025@1|root,COG2025@2|Bacteria,4NFSE@976|Bacteroidetes,2FMEK@200643|Bacteroidia,22W4A@171551|Porphyromonadaceae 976|Bacteroidetes C Electron transfer flavoprotein etfA - - ko:K03522 - - - - ko00000,ko04147 - - - ETF,ETF_alpha LIIFOLDO_01509 435591.BDI_0463 5.77e-214 591.0 COG2086@1|root,COG2086@2|Bacteria,4NFWB@976|Bacteroidetes,2FMG3@200643|Bacteroidia,22W81@171551|Porphyromonadaceae 976|Bacteroidetes C Electron transfer flavoprotein etfB - - ko:K03521 - - - - ko00000 - - - ETF LIIFOLDO_01510 435591.BDI_0464 1.68e-113 325.0 COG2207@1|root,COG2207@2|Bacteria,4NZCZ@976|Bacteroidetes,2FVHG@200643|Bacteroidia,2319F@171551|Porphyromonadaceae 976|Bacteroidetes K Transcriptional regulator - - - - - - - - - - - - HTH_18 LIIFOLDO_01511 435591.BDI_0465 0.0 882.0 COG3104@1|root,COG3104@2|Bacteria,4NIIT@976|Bacteroidetes,2FMR3@200643|Bacteroidia,22X2C@171551|Porphyromonadaceae 976|Bacteroidetes E POT family dtpD - - - - - - - - - - - MFS_1,PTR2 LIIFOLDO_01512 435591.BDI_0466 1.64e-285 778.0 COG1649@1|root,COG1649@2|Bacteria,4NGFW@976|Bacteroidetes,2FQJQ@200643|Bacteroidia,231IC@171551|Porphyromonadaceae 976|Bacteroidetes S PFAM Uncharacterised BCR, COG1649 - - - - - - - - - - - - DUF4015 LIIFOLDO_01513 435591.BDI_0467 0.0 1905.0 COG0403@1|root,COG1003@1|root,COG0403@2|Bacteria,COG1003@2|Bacteria,4NEDE@976|Bacteroidetes,2FKZJ@200643|Bacteroidia,22W2V@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the GcvP family gcvP - 1.4.4.2 ko:K00281,ko:K00283 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 M00532 R01221,R03425 RC00022,RC00929,RC02834,RC02880 ko00000,ko00001,ko00002,ko01000 - - - Aminotran_5,GDC-P LIIFOLDO_01514 435591.BDI_0468 3.18e-153 430.0 COG0491@1|root,COG0491@2|Bacteria,4NE2Y@976|Bacteroidetes,2FSQ1@200643|Bacteroidia,22XXM@171551|Porphyromonadaceae 976|Bacteroidetes P metallo-beta-lactamase - - - - - - - - - - - - Lactamase_B LIIFOLDO_01515 435591.BDI_0469 7.86e-158 442.0 COG0357@1|root,COG0357@2|Bacteria,4NEJG@976|Bacteroidetes,2FMRQ@200643|Bacteroidia,22X1I@171551|Porphyromonadaceae 976|Bacteroidetes J Specifically methylates the N7 position of a guanine in 16S rRNA rsmG GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 ko:K03501 - - - - ko00000,ko01000,ko03009,ko03036 - - - GidB LIIFOLDO_01516 435591.BDI_0470 3.32e-204 565.0 2CPS1@1|root,32SJR@2|Bacteria,4NTZ6@976|Bacteroidetes,2FPC8@200643|Bacteroidia,22Y5W@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3298) - - - - - - - - - - - - DUF3298,DUF4163 LIIFOLDO_01518 1235803.C825_01397 1.11e-31 120.0 2EQ16@1|root,33HMK@2|Bacteria,4NXR3@976|Bacteroidetes,2FZCB@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01519 435591.BDI_0474 0.0 1263.0 COG3250@1|root,COG3250@2|Bacteria,4NFPC@976|Bacteroidetes,2FPUZ@200643|Bacteroidia,22WX3@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the glycosyl hydrolase 2 family - - - - - - - - - - - - Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N LIIFOLDO_01520 435591.BDI_0475 6.21e-117 334.0 COG1247@1|root,COG1247@2|Bacteria,4NPIE@976|Bacteroidetes,2FSNY@200643|Bacteroidia,22Y03@171551|Porphyromonadaceae 976|Bacteroidetes M Acetyltransferase (GNAT) domain yncA - 2.3.1.183 ko:K03823 ko00440,ko01130,map00440,map01130 - R08871,R08938 RC00004,RC00064 ko00000,ko00001,ko01000 - - - Acetyltransf_4 LIIFOLDO_01521 435591.BDI_0476 2.26e-143 404.0 28H5J@1|root,2Z7I5@2|Bacteria,4NHK6@976|Bacteroidetes,2FM8F@200643|Bacteroidia,22XQ4@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4290) - - - - - - - - - - - - DUF4290 LIIFOLDO_01522 435591.BDI_0477 3.96e-311 848.0 COG0766@1|root,COG0766@2|Bacteria,4NDV8@976|Bacteroidetes,2FNYN@200643|Bacteroidia,22WZU@171551|Porphyromonadaceae 976|Bacteroidetes M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine murA - 2.5.1.7 ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 - R00660 RC00350 ko00000,ko00001,ko01000,ko01011 - - - EPSP_synthase LIIFOLDO_01523 435591.BDI_0478 9.48e-120 342.0 COG0806@1|root,COG0806@2|Bacteria,4NQF0@976|Bacteroidetes,2FMK1@200643|Bacteroidia,22YBJ@171551|Porphyromonadaceae 976|Bacteroidetes J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes rimM - - ko:K02860 - - - - ko00000,ko03009 - - - PRC,RimM LIIFOLDO_01524 435591.BDI_0479 5.51e-205 567.0 COG0739@1|root,COG0739@2|Bacteria,4NFZN@976|Bacteroidetes,2FMIQ@200643|Bacteroidia,22XKT@171551|Porphyromonadaceae 976|Bacteroidetes M Peptidase family M23 nlpD_1 - - - - - - - - - - - Peptidase_M23 LIIFOLDO_01525 435591.BDI_0480 3e-271 743.0 COG0743@1|root,COG0743@2|Bacteria,4NG0S@976|Bacteroidetes,2FN5M@200643|Bacteroidia,22W5M@171551|Porphyromonadaceae 976|Bacteroidetes I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) dxr GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 ko:K00099 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05688 RC01452 ko00000,ko00001,ko00002,ko01000 - - - DXPR_C,DXP_redisom_C,DXP_reductoisom LIIFOLDO_01526 435591.BDI_0481 0.0 877.0 COG0750@1|root,COG0750@2|Bacteria,4NEAR@976|Bacteroidetes,2FM5E@200643|Bacteroidia,22X5U@171551|Porphyromonadaceae 976|Bacteroidetes M zinc metalloprotease rseP - - ko:K11749 ko02024,ko04112,map02024,map04112 - - - ko00000,ko00001,ko01000,ko01002 - - - PDZ,PDZ_2,Peptidase_M50 LIIFOLDO_01527 435591.BDI_0482 3.53e-172 481.0 COG0457@1|root,COG0457@2|Bacteria,4NQ8Q@976|Bacteroidetes,2FQ4C@200643|Bacteroidia,22Y4A@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG28004 non supervised orthologous group - - - ko:K02651 ko04112,map04112 - - - ko00000,ko00001,ko02035,ko02044 - - - TPR_16,TPR_8 LIIFOLDO_01528 435591.BDI_0483 2.23e-259 711.0 COG0686@1|root,COG0686@2|Bacteria,4NE8F@976|Bacteroidetes,2FP71@200643|Bacteroidia,231XQ@171551|Porphyromonadaceae 976|Bacteroidetes C Alanine dehydrogenase/PNT, N-terminal domain ald - 1.4.1.1 ko:K00259 ko00250,ko00430,ko01100,map00250,map00430,map01100 - R00396 RC00008 ko00000,ko00001,ko01000 - - - AlaDh_PNT_C,AlaDh_PNT_N LIIFOLDO_01529 435591.BDI_0484 0.0 1121.0 COG0653@1|root,COG0653@2|Bacteria,4NF7C@976|Bacteroidetes,2FMVF@200643|Bacteroidia,22WWV@171551|Porphyromonadaceae 976|Bacteroidetes U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane secA - - ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4 - - Helicase_C,SEC-C,SecA_DEAD,SecA_PP_bind,SecA_SW LIIFOLDO_01530 435591.BDI_3379 0.0 2002.0 COG1629@1|root,COG4771@2|Bacteria,4NDU8@976|Bacteroidetes,2FMRZ@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec LIIFOLDO_01531 435591.BDI_3380 0.0 1120.0 COG0521@1|root,COG0521@2|Bacteria,4PMTR@976|Bacteroidetes,2G0FX@200643|Bacteroidia 976|Bacteroidetes H Susd and RagB outer membrane lipoprotein - - - - - - - - - - - - SusD-like LIIFOLDO_01532 435591.BDI_3381 0.0 1844.0 COG3250@1|root,COG3250@2|Bacteria,4NE7H@976|Bacteroidetes,2FNT8@200643|Bacteroidia 976|Bacteroidetes G Belongs to the glycosyl hydrolase 2 family - - - - - - - - - - - - Glyco_hydro_2,Glyco_hydro_2_C LIIFOLDO_01533 435591.BDI_3382 2.01e-141 399.0 COG0009@1|root,COG0009@2|Bacteria,4NDZR@976|Bacteroidetes,2FP9A@200643|Bacteroidia,22XEI@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the SUA5 family yciO - - - - - - - - - - - Sua5_yciO_yrdC LIIFOLDO_01534 435591.BDI_3383 9.13e-203 561.0 COG0623@1|root,COG0623@2|Bacteria,4NEVE@976|Bacteroidetes,2FM85@200643|Bacteroidia,22W1Y@171551|Porphyromonadaceae 976|Bacteroidetes I Enoyl- acyl-carrier-protein reductase NADH fabI - 1.3.1.10,1.3.1.9 ko:K00208 ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212 M00083,M00572 R01404,R04429,R04430,R04724,R04725,R04955,R04956,R04958,R04959,R04961,R04962,R04966,R04967,R04969,R04970,R07765,R10118,R10122,R11671 RC00052,RC00076,RC00120 ko00000,ko00001,ko00002,ko01000,ko01004 - - - adh_short_C2 LIIFOLDO_01535 435591.BDI_3384 0.0 1618.0 COG0770@1|root,COG0787@1|root,COG0770@2|Bacteria,COG0787@2|Bacteria,4NEXM@976|Bacteroidetes,2FMM3@200643|Bacteroidia,22WCC@171551|Porphyromonadaceae 976|Bacteroidetes M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids alr - 5.1.1.1,6.3.2.10 ko:K01775,ko:K01929 ko00300,ko00473,ko00550,ko01100,ko01502,map00300,map00473,map00550,map01100,map01502 - R00401,R04573,R04617 RC00064,RC00141,RC00285 ko00000,ko00001,ko01000,ko01011 - - - Ala_racemase_C,Ala_racemase_N,Mur_ligase,Mur_ligase_M LIIFOLDO_01536 435591.BDI_3385 3.18e-236 649.0 COG2755@1|root,COG2755@2|Bacteria,4NFN6@976|Bacteroidetes,2FKZ2@200643|Bacteroidia,22W3N@171551|Porphyromonadaceae 976|Bacteroidetes E GSCFA family - - - - - - - - - - - - GSCFA LIIFOLDO_01537 762984.HMPREF9445_00540 2.32e-20 84.0 28QAK@1|root,2ZCT6@2|Bacteria,4P7RX@976|Bacteroidetes,2FUU8@200643|Bacteroidia,4ASJ2@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01538 1121098.HMPREF1534_01610 1.92e-70 216.0 2DMYF@1|root,32UDM@2|Bacteria,4P2QD@976|Bacteroidetes,2FMPW@200643|Bacteroidia,4APWN@815|Bacteroidaceae 976|Bacteroidetes S Protein of unknown function (DUF3990) - - - - - - - - - - - - DUF3990 LIIFOLDO_01539 667015.Bacsa_2399 1.31e-24 94.4 2EC10@1|root,316SV@2|Bacteria,4P9P9@976|Bacteroidetes,2FV6P@200643|Bacteroidia,4ASA9@815|Bacteroidaceae 976|Bacteroidetes S Protein of unknown function (DUF3791) - - - - - - - - - - - - DUF3791 LIIFOLDO_01540 435591.BDI_3386 6.46e-202 557.0 COG3291@1|root,COG3291@2|Bacteria,4NKCP@976|Bacteroidetes,2FRRE@200643|Bacteroidia,22XMA@171551|Porphyromonadaceae 976|Bacteroidetes S Peptidase of plants and bacteria - - - - - - - - - - - - BSP LIIFOLDO_01541 435591.BDI_3387 0.0 1599.0 COG3537@1|root,COG3537@2|Bacteria,4NDYB@976|Bacteroidetes,2FMQ9@200643|Bacteroidia,22W3K@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 LIIFOLDO_01542 435591.BDI_3388 0.0 1110.0 COG3637@1|root,COG3637@2|Bacteria,4NE4Y@976|Bacteroidetes,2G0HK@200643|Bacteroidia,2324C@171551|Porphyromonadaceae 976|Bacteroidetes M SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_01543 435591.BDI_3390 0.0 1833.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FWS8@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_01544 435591.BDI_3391 0.0 2493.0 COG0642@1|root,COG0745@1|root,COG2207@1|root,COG3292@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG2207@2|Bacteria,COG3292@2|Bacteria,4NG0B@976|Bacteroidetes,2FM88@200643|Bacteroidia 976|Bacteroidetes T Response regulator receiver domain protein - - - - - - - - - - - - HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y LIIFOLDO_01545 1122931.AUAE01000008_gene3933 0.0 1137.0 COG0642@1|root,COG2205@2|Bacteria,4NDXU@976|Bacteroidetes,2FNQ8@200643|Bacteroidia,22WP1@171551|Porphyromonadaceae 976|Bacteroidetes T PAS domain - - - - - - - - - - - - GAF,HATPase_c,HisKA,PAS_3,PAS_9,Response_reg,SBP_bac_3 LIIFOLDO_01546 435591.BDI_3392 0.0 1476.0 COG1882@1|root,COG1882@2|Bacteria,4NDWW@976|Bacteroidetes,2FMC2@200643|Bacteroidia,22X3W@171551|Porphyromonadaceae 976|Bacteroidetes C Psort location Cytoplasmic, score 9.97 pflB - 2.3.1.54 ko:K00656 ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120 - R00212,R06987 RC00004,RC01181,RC02742,RC02833 ko00000,ko00001,ko01000 - - - Gly_radical,PFL-like LIIFOLDO_01547 435591.BDI_3393 1.7e-182 506.0 COG1180@1|root,COG1180@2|Bacteria,4NHMK@976|Bacteroidetes,2FN1S@200643|Bacteroidia,22XWK@171551|Porphyromonadaceae 976|Bacteroidetes C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine pflA - 1.97.1.4 ko:K04069 - - R04710 - ko00000,ko01000 - - - Fer4_12,Radical_SAM LIIFOLDO_01548 435591.BDI_3394 5.68e-129 367.0 COG0664@1|root,COG0664@2|Bacteria,4NSMK@976|Bacteroidetes,2FSMY@200643|Bacteroidia,2305Q@171551|Porphyromonadaceae 976|Bacteroidetes T Cyclic nucleotide-binding domain protein - - - - - - - - - - - - cNMP_binding LIIFOLDO_01549 435591.BDI_1235 1.5e-171 479.0 COG0336@1|root,COG0336@2|Bacteria,4NF2Q@976|Bacteroidetes,2FPQ5@200643|Bacteroidia,22WX6@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the RNA methyltransferase TrmD family trmD GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 ko:K00554 - - R00597 RC00003,RC00334 ko00000,ko01000,ko03016 - - - tRNA_m1G_MT LIIFOLDO_01550 435591.BDI_1234 0.0 1616.0 COG0072@1|root,COG0073@1|root,COG0072@2|Bacteria,COG0073@2|Bacteria,4NF5B@976|Bacteroidetes,2FNBF@200643|Bacteroidia,22WG1@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily pheT GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 ko:K01890 ko00970,map00970 M00359,M00360 R03660 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - B3_4,B5,FDX-ACB,tRNA_bind LIIFOLDO_01551 435591.BDI_1233 2.19e-164 461.0 COG0217@1|root,COG0217@2|Bacteria,4NE8Y@976|Bacteroidetes,2FN07@200643|Bacteroidia,22WSF@171551|Porphyromonadaceae 976|Bacteroidetes K transcriptional regulatory protein - - - - - - - - - - - - Transcrip_reg LIIFOLDO_01552 435591.BDI_1232 2.49e-180 502.0 2DM0I@1|root,316K4@2|Bacteria,4NRGX@976|Bacteroidetes,2FS4Z@200643|Bacteroidia,22YYR@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01553 435591.BDI_1231 2.97e-244 672.0 2A0ER@1|root,30NIH@2|Bacteria,4PB16@976|Bacteroidetes,2FY6G@200643|Bacteroidia 976|Bacteroidetes S Protein of unknown function (DUF4621) - - - - - - - - - - - - DUF4621 LIIFOLDO_01554 435591.BDI_1230 0.0 937.0 COG1629@1|root,COG4771@2|Bacteria,4NJV0@976|Bacteroidetes,2FNMY@200643|Bacteroidia,22XTW@171551|Porphyromonadaceae 976|Bacteroidetes P Psort location OuterMembrane, score - - - - - - - - - - - - - LIIFOLDO_01555 435591.BDI_1229 1.65e-285 780.0 COG1215@1|root,COG1215@2|Bacteria,4NFI8@976|Bacteroidetes,2FQAZ@200643|Bacteroidia,22W2Z@171551|Porphyromonadaceae 976|Bacteroidetes M Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - GT87 LIIFOLDO_01556 435591.BDI_1228 0.0 2027.0 COG0793@1|root,COG4946@1|root,COG0793@2|Bacteria,COG4946@2|Bacteria,4NGU2@976|Bacteroidetes,2FPGA@200643|Bacteroidia,22W33@171551|Porphyromonadaceae 976|Bacteroidetes M Tricorn protease homolog - - - ko:K08676 - - - - ko00000,ko01000,ko01002 - - - PD40,PDZ_2,Peptidase_S41,Tricorn_C1 LIIFOLDO_01558 435591.BDI_1226 6.64e-185 513.0 COG3022@1|root,COG3022@2|Bacteria,4NFP2@976|Bacteroidetes,2FNHM@200643|Bacteroidia,22XMG@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the UPF0246 family yaaA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0033194,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:1901700 - ko:K09861 - - - - ko00000 - - - H2O2_YaaD LIIFOLDO_01560 435591.BDI_1223 0.0 1612.0 COG0542@1|root,COG0542@2|Bacteria,4NGEM@976|Bacteroidetes,2FM5N@200643|Bacteroidia,22WE7@171551|Porphyromonadaceae 976|Bacteroidetes O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE clpB - - ko:K03695 ko04213,map04213 - - - ko00000,ko00001,ko03110 - - - AAA,AAA_2,ClpB_D2-small,Clp_N LIIFOLDO_01561 999419.HMPREF1077_01894 5.92e-90 300.0 COG0642@1|root,COG2205@2|Bacteria,4NKBC@976|Bacteroidetes,2FNE0@200643|Bacteroidia,22WMG@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase-like ATPases - - - - - - - - - - - - HATPase_c,HisKA,PAS_3,PAS_4 LIIFOLDO_01562 435591.BDI_1221 4.18e-71 214.0 2C27K@1|root,32XKH@2|Bacteria,4NTIY@976|Bacteroidetes,2FU25@200643|Bacteroidia,22YJY@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - LIIFOLDO_01563 435591.BDI_1220 4.16e-115 335.0 COG2885@1|root,COG2885@2|Bacteria,4NEGF@976|Bacteroidetes,2FNU2@200643|Bacteroidia,22XKZ@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the ompA family - - - - - - - - - - - - Gly-zipper_Omp,OmpA LIIFOLDO_01564 435591.BDI_1219 2.33e-262 717.0 COG3568@1|root,COG3568@2|Bacteria,4NGUV@976|Bacteroidetes,2FNIX@200643|Bacteroidia,22Y8N@171551|Porphyromonadaceae 976|Bacteroidetes S Endonuclease/Exonuclease/phosphatase family - - - - - - - - - - - - Exo_endo_phos LIIFOLDO_01565 435591.BDI_1218 3.56e-152 427.0 28N4A@1|root,2ZB9T@2|Bacteria,4NKZG@976|Bacteroidetes,2FP6K@200643|Bacteroidia,22XPK@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4136) - - - - - - - - - - - - DUF4136 LIIFOLDO_01566 435591.BDI_1217 4.2e-152 427.0 COG3047@1|root,COG3047@2|Bacteria,4NP9X@976|Bacteroidetes,2FMHB@200643|Bacteroidia,22XWW@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl LIIFOLDO_01567 435591.BDI_1216 1.31e-159 446.0 294ZR@1|root,2ZSCK@2|Bacteria,4NNYY@976|Bacteroidetes,2FP6D@200643|Bacteroidia,22XYV@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG27188 non supervised orthologous group - - - - - - - - - - - - - LIIFOLDO_01568 435591.BDI_1215 9.92e-203 560.0 COG1409@1|root,COG1409@2|Bacteria,4NGXX@976|Bacteroidetes,2FPJ6@200643|Bacteroidia,22WTS@171551|Porphyromonadaceae 976|Bacteroidetes S Calcineurin-like phosphoesterase - - - - - - - - - - - - Metallophos LIIFOLDO_01569 435591.BDI_1214 7.77e-177 492.0 COG1011@1|root,COG1011@2|Bacteria,4PKTR@976|Bacteroidetes,2G04E@200643|Bacteroidia,22XRX@171551|Porphyromonadaceae 976|Bacteroidetes S Haloacid dehalogenase-like hydrolase - - 3.1.3.102,3.1.3.104 ko:K07025,ko:K20862 ko00740,ko01100,ko01110,map00740,map01100,map01110 M00125 R00548,R07280 RC00017 ko00000,ko00001,ko00002,ko01000 - - - HAD_2 LIIFOLDO_01570 435591.BDI_1213 5.6e-221 608.0 COG0558@1|root,COG0558@2|Bacteria,4NFW0@976|Bacteroidetes,2FNQT@200643|Bacteroidia,22X41@171551|Porphyromonadaceae 976|Bacteroidetes I CDP-alcohol phosphatidyltransferase - - - - - - - - - - - - CDP-OH_P_transf LIIFOLDO_01571 435591.BDI_1212 2.46e-217 598.0 COG0189@1|root,COG0189@2|Bacteria,4NJSZ@976|Bacteroidetes,2FPPB@200643|Bacteroidia,22WTE@171551|Porphyromonadaceae 976|Bacteroidetes HJ Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - LIIFOLDO_01572 435591.BDI_1211 1.1e-163 458.0 COG1208@1|root,COG1208@2|Bacteria,4NH68@976|Bacteroidetes,2FNT3@200643|Bacteroidia,22WHV@171551|Porphyromonadaceae 976|Bacteroidetes JM Nucleotidyl transferase - - - - - - - - - - - - NTP_transf_3,NTP_transferase LIIFOLDO_01573 435591.BDI_1210 6.97e-49 155.0 COG0724@1|root,COG0724@2|Bacteria,4NV5J@976|Bacteroidetes,2G2C6@200643|Bacteroidia,231QN@171551|Porphyromonadaceae 976|Bacteroidetes S Pfam:RRM_6 - - - - - - - - - - - - RRM_1 LIIFOLDO_01574 435591.BDI_1209 2.11e-313 852.0 28NIY@1|root,2ZBK8@2|Bacteria,4NM7G@976|Bacteroidetes,2FQNB@200643|Bacteroidia,22XZ1@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01575 435591.BDI_1208 0.0 1758.0 COG1472@1|root,COG1472@2|Bacteria,4NE90@976|Bacteroidetes,2FMV4@200643|Bacteroidia,22WDW@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 3 xyl3A_3 - 3.2.1.21 ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 - R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040 RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248 ko00000,ko00001,ko01000 - GH3 - Fn3-like,Glyco_hydro_3,Glyco_hydro_3_C,PA14 LIIFOLDO_01576 435591.BDI_2739 0.0 1433.0 COG3669@1|root,COG3669@2|Bacteria,4NEDX@976|Bacteroidetes,2FNFV@200643|Bacteroidia,22WIN@171551|Porphyromonadaceae 976|Bacteroidetes G F5 8 type C domain protein - - 3.2.1.51 ko:K01206 ko00511,map00511 - - - ko00000,ko00001,ko01000,ko04147 - GH29 - Alpha_L_fucos,CHB_HEX_C_1,F5_F8_type_C,Fn3_assoc LIIFOLDO_01577 435591.BDI_2740 0.0 1819.0 COG0642@1|root,COG0784@1|root,COG0834@1|root,COG0784@2|Bacteria,COG0834@2|Bacteria,COG2205@2|Bacteria,4NDXU@976|Bacteroidetes,2FXAU@200643|Bacteroidia,231GG@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - GAF,HATPase_c,HisKA,PAS,PAS_3,PAS_9,Response_reg LIIFOLDO_01578 435591.BDI_2741 7.78e-235 645.0 COG1082@1|root,COG1082@2|Bacteria,4NEUS@976|Bacteroidetes 976|Bacteroidetes G PFAM Xylose isomerase, TIM barrel domain - - - - - - - - - - - - AP_endonuc_2 LIIFOLDO_01579 435591.BDI_2742 0.0 1134.0 COG2272@1|root,COG2272@2|Bacteria,4NG5B@976|Bacteroidetes,2FP5J@200643|Bacteroidia,22Y8J@171551|Porphyromonadaceae 976|Bacteroidetes I Carboxylesterase family - - - ko:K03929 - - - - ko00000,ko01000 - CE10 - COesterase LIIFOLDO_01580 357276.EL88_00425 2.02e-105 332.0 COG3637@1|root,COG3637@2|Bacteria,4NE4Y@976|Bacteroidetes,2FP8W@200643|Bacteroidia,4AMIV@815|Bacteroidaceae 976|Bacteroidetes M COG NOG26547 non supervised orthologous group - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_01581 1203611.KB894545_gene373 2.16e-248 732.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_01582 435591.BDI_2747 3.67e-311 849.0 COG0673@1|root,COG0673@2|Bacteria,4NGGS@976|Bacteroidetes 976|Bacteroidetes S Oxidoreductase - - - - - - - - - - - - GFO_IDH_MocA LIIFOLDO_01583 435591.BDI_2748 5.83e-175 488.0 COG2133@1|root,COG2133@2|Bacteria,4NGMS@976|Bacteroidetes,2FQZ3@200643|Bacteroidia,22W58@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080 LIIFOLDO_01584 1122931.AUAE01000007_gene1380 2.86e-231 640.0 COG0673@1|root,COG0673@2|Bacteria,4PJ2W@976|Bacteroidetes,2FQQW@200643|Bacteroidia,22ZUJ@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA LIIFOLDO_01585 435591.BDI_2749 0.0 2008.0 COG0642@1|root,COG0745@1|root,COG3292@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG3292@2|Bacteria,4NDXU@976|Bacteroidetes,2FM2N@200643|Bacteroidia 976|Bacteroidetes T ATPase histidine kinase DNA gyrase B HSP90 domain protein - - - - - - - - - - - - HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y LIIFOLDO_01586 1122931.AUAE01000007_gene1377 8.78e-167 470.0 COG3279@1|root,COG3279@2|Bacteria,4NKFH@976|Bacteroidetes,2FPQP@200643|Bacteroidia,22W1A@171551|Porphyromonadaceae 976|Bacteroidetes KT LytTr DNA-binding domain - - - - - - - - - - - - LytTR LIIFOLDO_01587 435591.BDI_2751 3.3e-283 773.0 28M4A@1|root,2ZAI8@2|Bacteria,4NIAH@976|Bacteroidetes,2FQR3@200643|Bacteroidia,22WAE@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01589 435591.BDI_2753 5.87e-229 630.0 COG1186@1|root,COG1186@2|Bacteria,4NEN1@976|Bacteroidetes,2FMZK@200643|Bacteroidia,22WHJ@171551|Porphyromonadaceae 976|Bacteroidetes J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA prfB - - ko:K02836 - - - - ko00000,ko03012 - - - PCRF,RF-1 LIIFOLDO_01590 435591.BDI_2754 0.0 1201.0 COG1022@1|root,COG1022@2|Bacteria,4NEA4@976|Bacteroidetes,2FNK9@200643|Bacteroidia,22WFS@171551|Porphyromonadaceae 976|Bacteroidetes I Long-chain fatty acid--CoA ligase fadD - 6.2.1.3 ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 M00086 R01280 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 4.C.1.1 - - AMP-binding LIIFOLDO_01591 435591.BDI_2755 6.39e-71 213.0 COG1695@1|root,COG1695@2|Bacteria,4NSI4@976|Bacteroidetes,2FTF6@200643|Bacteroidia,22Y5S@171551|Porphyromonadaceae 976|Bacteroidetes K Transcriptional regulator - - - ko:K10947 - - - - ko00000,ko03000 - - - PadR LIIFOLDO_01592 435591.BDI_2756 2.12e-253 696.0 COG1983@1|root,COG1983@2|Bacteria,4NG3T@976|Bacteroidetes,2FPZX@200643|Bacteroidia,22XZS@171551|Porphyromonadaceae 976|Bacteroidetes KT PspC domain - - - ko:K03973 - - - - ko00000,ko02048,ko03000 - - - DUF2807,PspC LIIFOLDO_01593 435591.BDI_2757 3.51e-88 259.0 COG0537@1|root,COG0537@2|Bacteria,4NQ4X@976|Bacteroidetes,2FSRY@200643|Bacteroidia,22Y7E@171551|Porphyromonadaceae 976|Bacteroidetes FG HIT family hydrolase hinT - - ko:K02503 - - - - ko00000,ko04147 - - - HIT LIIFOLDO_01594 435591.BDI_2758 4.13e-99 288.0 COG0782@1|root,COG0782@2|Bacteria,4NNH6@976|Bacteroidetes,2FPFU@200643|Bacteroidia,22XVA@171551|Porphyromonadaceae 976|Bacteroidetes K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides greA - - ko:K03624 - - - - ko00000,ko03021 - - - GreA_GreB,GreA_GreB_N LIIFOLDO_01595 435591.BDI_2759 2.47e-271 743.0 COG0526@1|root,COG0526@2|Bacteria,4P37Z@976|Bacteroidetes,2G3DY@200643|Bacteroidia,22WDB@171551|Porphyromonadaceae 976|Bacteroidetes CO Domain of unknown function (DUF4369) - - - - - - - - - - - - AhpC-TSA,DUF4369,Thioredoxin_8 LIIFOLDO_01596 435591.BDI_2760 0.0 1396.0 COG1185@1|root,COG1185@2|Bacteria,4NE4Q@976|Bacteroidetes,2FN5H@200643|Bacteroidia,22W1K@171551|Porphyromonadaceae 976|Bacteroidetes J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction pnp - 2.7.7.8 ko:K00962 ko00230,ko00240,ko03018,map00230,map00240,map03018 M00394 R00437,R00438,R00439,R00440 RC02795 ko00000,ko00001,ko00002,ko01000,ko03016,ko03019 - - - KH_1,PNPase,RNase_PH,RNase_PH_C,S1 LIIFOLDO_01597 435591.BDI_2354 8.47e-173 486.0 COG0202@1|root,COG0202@2|Bacteria,4NE8W@976|Bacteroidetes,2FM4P@200643|Bacteroidia,22XAK@171551|Porphyromonadaceae 976|Bacteroidetes K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates rpoA GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 ko:K03040 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 - - - RNA_pol_A_CTD,RNA_pol_A_bac,RNA_pol_L LIIFOLDO_01598 435591.BDI_2353 1.6e-103 300.0 COG0203@1|root,COG0203@2|Bacteria,4NNW0@976|Bacteroidetes,2FNPH@200643|Bacteroidia,22XWT@171551|Porphyromonadaceae 976|Bacteroidetes J 50S ribosomal protein L17 rplQ GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - ko:K02879 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L17 LIIFOLDO_01600 435591.BDI_2351 6.03e-307 837.0 COG0148@1|root,COG0148@2|Bacteria,4NF5M@976|Bacteroidetes,2FMNI@200643|Bacteroidia,22X7E@171551|Porphyromonadaceae 976|Bacteroidetes G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis eno - 4.2.1.11 ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 M00001,M00002,M00003,M00346,M00394 R00658 RC00349 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 - - - Enolase_C,Enolase_N LIIFOLDO_01601 435591.BDI_2350 7.24e-80 237.0 2EH5W@1|root,33AXS@2|Bacteria,4NXG0@976|Bacteroidetes,2FVGU@200643|Bacteroidia,2319T@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4907) - - - - - - - - - - - - DUF4907 LIIFOLDO_01602 435591.BDI_2349 6.35e-114 340.0 COG3055@1|root,COG3055@2|Bacteria,4NG50@976|Bacteroidetes,2FN9K@200643|Bacteroidia,22YKD@171551|Porphyromonadaceae 976|Bacteroidetes S Kelch repeat type 1-containing protein nanM - - - - - - - - - - - Kelch_1,Kelch_3,Kelch_4,Kelch_6 LIIFOLDO_01603 435591.BDI_2348 0.0 875.0 28J4T@1|root,2Z90P@2|Bacteria,4NHUC@976|Bacteroidetes,2FN5E@200643|Bacteroidia,22YY9@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4270) - - - - - - - - - - - - DUF4270 LIIFOLDO_01604 435591.BDI_2347 1.26e-288 788.0 COG2067@1|root,COG2067@2|Bacteria,4NPJN@976|Bacteroidetes,2FNZQ@200643|Bacteroidia,23069@171551|Porphyromonadaceae 976|Bacteroidetes I COG NOG24984 non supervised orthologous group - - - - - - - - - - - - - LIIFOLDO_01605 435591.BDI_2346 7.35e-99 287.0 COG3279@1|root,COG3279@2|Bacteria,4P36J@976|Bacteroidetes,2FY1U@200643|Bacteroidia 976|Bacteroidetes K LytTr DNA-binding domain - - - - - - - - - - - - LytTR LIIFOLDO_01606 435591.BDI_2345 1.18e-173 485.0 COG3279@1|root,COG3279@2|Bacteria,4NGBF@976|Bacteroidetes,2FMKB@200643|Bacteroidia 976|Bacteroidetes KT COG3279 Response regulator of the LytR AlgR family - - - ko:K02477 - - - - ko00000,ko02022 - - - LytTR,Response_reg LIIFOLDO_01607 435591.BDI_2344 4.89e-282 771.0 COG2972@1|root,COG2972@2|Bacteria,4NQSK@976|Bacteroidetes,2FTD5@200643|Bacteroidia 976|Bacteroidetes T Histidine kinase - - - - - - - - - - - - His_kinase,Rho_RNA_bind LIIFOLDO_01608 435591.BDI_2343 8.84e-306 839.0 COG2197@1|root,COG2197@2|Bacteria,4NMWF@976|Bacteroidetes,2FNPQ@200643|Bacteroidia 976|Bacteroidetes KT response regulator - - - - - - - - - - - - GerE LIIFOLDO_01609 435591.BDI_2343 8.06e-67 217.0 COG2197@1|root,COG2197@2|Bacteria,4NMWF@976|Bacteroidetes,2FNPQ@200643|Bacteroidia 976|Bacteroidetes KT response regulator - - - - - - - - - - - - GerE LIIFOLDO_01610 435591.BDI_2342 0.0 1365.0 COG1629@1|root,COG1629@2|Bacteria,4P01D@976|Bacteroidetes,2G09F@200643|Bacteroidia 976|Bacteroidetes P Psort location OuterMembrane, score - - - - - - - - - - - - OMP_b-brl_3 LIIFOLDO_01611 1122971.BAME01000091_gene5624 3.28e-27 102.0 2DQ76@1|root,3351D@2|Bacteria,4NXDM@976|Bacteroidetes,2FUEZ@200643|Bacteroidia,230Y1@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3791) - - - - - - - - - - - - DUF3791 LIIFOLDO_01612 435591.BDI_2341 7.83e-73 219.0 COG0335@1|root,COG0335@2|Bacteria,4NNPW@976|Bacteroidetes,2FSHU@200643|Bacteroidia,22Y1V@171551|Porphyromonadaceae 976|Bacteroidetes J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site rplS GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - ko:K02884 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L19 LIIFOLDO_01613 435591.BDI_2340 7.63e-249 682.0 2EG5K@1|root,339XG@2|Bacteria,4NVFE@976|Bacteroidetes,2FPJS@200643|Bacteroidia,230QC@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4249) - - - - - - - - - - - - DUF4249 LIIFOLDO_01614 435591.BDI_2339 0.0 1760.0 COG1629@1|root,COG4771@2|Bacteria,4NF4B@976|Bacteroidetes,2FM7I@200643|Bacteroidia,22XCB@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent receptor plug domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_01615 435591.BDI_2338 0.0 1975.0 COG1472@1|root,COG1680@1|root,COG1472@2|Bacteria,COG1680@2|Bacteria,4NET8@976|Bacteroidetes,2FN0V@200643|Bacteroidia,22WIJ@171551|Porphyromonadaceae 976|Bacteroidetes G hydrolase, family 3 nagA - - - - - - - - - - - Beta-lactamase,Glyco_hydro_3,Glyco_hydro_3_C LIIFOLDO_01616 435591.BDI_2337 1.27e-249 684.0 COG0079@1|root,COG0079@2|Bacteria,4NH43@976|Bacteroidetes,2FMAS@200643|Bacteroidia,22WAZ@171551|Porphyromonadaceae 976|Bacteroidetes E Aminotransferase - - 4.1.1.81 ko:K04720 ko00860,map00860 - R06530 RC00517 ko00000,ko00001,ko01000 - - - Aminotran_1_2 LIIFOLDO_01617 435591.BDI_2336 1.19e-128 366.0 COG1595@1|root,COG1595@2|Bacteria,4NRE8@976|Bacteroidetes,2G342@200643|Bacteroidia,231ZY@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 LIIFOLDO_01618 435591.BDI_2335 1.86e-217 601.0 COG3712@1|root,COG3712@2|Bacteria,4NICU@976|Bacteroidetes,2FPP5@200643|Bacteroidia,22YI8@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR LIIFOLDO_01619 435591.BDI_2334 0.0 2280.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_01620 435591.BDI_2333 0.0 1110.0 COG0446@1|root,COG0446@2|Bacteria,4NE3A@976|Bacteroidetes,2FKYC@200643|Bacteroidia 976|Bacteroidetes S SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_01622 435591.BDI_1426 1.36e-278 762.0 COG3525@1|root,COG3525@2|Bacteria,4NGV2@976|Bacteroidetes,2FP4G@200643|Bacteroidia 976|Bacteroidetes G Glycosyl hydrolase family 20, catalytic domain - - - - - - - - - - - - Glyco_hydro_20 LIIFOLDO_01623 435591.BDI_1427 2.57e-133 377.0 COG0110@1|root,COG0110@2|Bacteria,4NH27@976|Bacteroidetes,2FQA3@200643|Bacteroidia,22XJT@171551|Porphyromonadaceae 976|Bacteroidetes S Hexapeptide repeat of succinyl-transferase - - - - - - - - - - - - Hexapep,Hexapep_2 LIIFOLDO_01624 435591.BDI_1428 2.57e-221 609.0 COG2207@1|root,COG2207@2|Bacteria,4NDYY@976|Bacteroidetes,2FNFA@200643|Bacteroidia,22WH9@171551|Porphyromonadaceae 976|Bacteroidetes K Transcriptional regulator - - - - - - - - - - - - HTH_18 LIIFOLDO_01626 435591.BDI_1430 0.0 883.0 COG0436@1|root,COG0436@2|Bacteria,4NHP7@976|Bacteroidetes,2FN3D@200643|Bacteroidia,22XCE@171551|Porphyromonadaceae 976|Bacteroidetes E Aminotransferase alaC - - - - - - - - - - - Aminotran_1_2 LIIFOLDO_01627 435591.BDI_1431 7.04e-150 420.0 COG1678@1|root,COG1678@2|Bacteria,4NFQA@976|Bacteroidetes,2FM82@200643|Bacteroidia,22YAY@171551|Porphyromonadaceae 976|Bacteroidetes K Uncharacterized ACR, COG1678 - - - ko:K07735 - - - - ko00000,ko03000 - - - DUF179 LIIFOLDO_01628 435591.BDI_1432 8.82e-124 352.0 COG1670@1|root,COG1670@2|Bacteria,4NQ8K@976|Bacteroidetes,2FMII@200643|Bacteroidia,22Y4G@171551|Porphyromonadaceae 976|Bacteroidetes J Acetyltransferase (GNAT) domain speG - 2.3.1.57 ko:K00657 ko00330,ko01100,ko04216,map00330,map01100,map04216 M00135 R01154 RC00004,RC00096 ko00000,ko00001,ko00002,ko01000 - - - Acetyltransf_3 LIIFOLDO_01629 435591.BDI_1433 3.59e-286 781.0 COG1216@1|root,COG1216@2|Bacteria,4NFW5@976|Bacteroidetes,2FQ14@200643|Bacteroidia,22X88@171551|Porphyromonadaceae 976|Bacteroidetes S Glycosyl transferase family group 2 wbbL - - ko:K07011 - - - - ko00000 - - - Glyco_tranf_2_3,Glyco_trans_2_3,Glycos_transf_2 LIIFOLDO_01630 435591.BDI_1434 1.64e-144 407.0 COG0353@1|root,COG0353@2|Bacteria,4NEWI@976|Bacteroidetes,2FM1C@200643|Bacteroidia,22WED@171551|Porphyromonadaceae 976|Bacteroidetes L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO recR - - ko:K06187 ko03440,map03440 - - - ko00000,ko00001,ko03400 - - - RecR,Toprim_4 LIIFOLDO_01631 435591.BDI_1436 0.0 1238.0 COG1297@1|root,COG1297@2|Bacteria,4NEIY@976|Bacteroidetes,2FN5W@200643|Bacteroidia,22W0A@171551|Porphyromonadaceae 976|Bacteroidetes S Peptide transporter - - - - - - - - - - - - OPT LIIFOLDO_01632 435591.BDI_1437 0.0 887.0 COG2385@1|root,COG2385@2|Bacteria,4NG21@976|Bacteroidetes,2FP4W@200643|Bacteroidia,22X5F@171551|Porphyromonadaceae 976|Bacteroidetes D Stage II sporulation protein lytB - - ko:K06381 - - - - ko00000 - - - DUF4922,Glycos_transf_2,SpoIID LIIFOLDO_01633 435591.BDI_1438 0.0 1543.0 COG0577@1|root,COG0577@2|Bacteria,4NFGD@976|Bacteroidetes,2FNP6@200643|Bacteroidia,22VZ8@171551|Porphyromonadaceae 976|Bacteroidetes V FtsX-like permease family - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD LIIFOLDO_01634 435591.BDI_1439 0.0 1044.0 COG0737@1|root,COG0737@2|Bacteria,4NPMC@976|Bacteroidetes,2FSKP@200643|Bacteroidia,23116@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the 5'-nucleotidase family - - 3.1.3.5,3.6.1.45 ko:K11751 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 - R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346 RC00017 ko00000,ko00001,ko01000 - - - 5_nucleotid_C,Metallophos LIIFOLDO_01635 435591.BDI_1440 0.0 924.0 COG0591@1|root,COG0591@2|Bacteria,4NEF3@976|Bacteroidetes,2FM9G@200643|Bacteroidia,22WVH@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - - - - - - - - - - SSF LIIFOLDO_01636 435591.BDI_1441 7e-142 400.0 COG0218@1|root,COG0218@2|Bacteria,4NEA9@976|Bacteroidetes,2FM4M@200643|Bacteroidia,22X2K@171551|Porphyromonadaceae 976|Bacteroidetes D Necessary for normal cell division and for the maintenance of normal septation engB - - ko:K03978 - - - - ko00000,ko03036 - - - MMR_HSR1 LIIFOLDO_01637 435591.BDI_1442 0.0 1277.0 COG1032@1|root,COG1032@2|Bacteria,4NETM@976|Bacteroidetes,2FQCJ@200643|Bacteroidia,22XIN@171551|Porphyromonadaceae 976|Bacteroidetes C Elongator protein 3, MiaB family, Radical SAM - - - - - - - - - - - - Radical_SAM LIIFOLDO_01638 435591.BDI_1443 0.0 1533.0 COG1629@1|root,COG4771@2|Bacteria,4NF05@976|Bacteroidetes,2FMJS@200643|Bacteroidia,22X9C@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent receptor - - - ko:K16089 - - - - ko00000,ko02000 1.B.14.1,1.B.14.10 - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_01639 999419.HMPREF1077_02611 6.59e-48 156.0 2EP0A@1|root,33GM5@2|Bacteria,4NYGM@976|Bacteroidetes,2FUEY@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01640 435591.BDI_1445 0.0 1048.0 COG0569@1|root,COG2985@1|root,COG0569@2|Bacteria,COG2985@2|Bacteria,4NEBW@976|Bacteroidetes,2FMDF@200643|Bacteroidia,22W10@171551|Porphyromonadaceae 976|Bacteroidetes P TrkA C-terminal domain protein - - - ko:K07085 - - - - ko00000 2.A.81 - - Asp-Al_Ex,TrkA_C LIIFOLDO_01641 435591.BDI_1446 0.0 1893.0 COG1131@1|root,COG1131@2|Bacteria,4NHPD@976|Bacteroidetes,2FRF1@200643|Bacteroidia 976|Bacteroidetes V ABC-2 type transporter - - - - - - - - - - - - ABC2_membrane,ABC_tran,TerB LIIFOLDO_01643 435591.BDI_1448 1.16e-265 729.0 COG2265@1|root,COG2265@2|Bacteria,4PKBS@976|Bacteroidetes,2G3EC@200643|Bacteroidia,231MW@171551|Porphyromonadaceae 976|Bacteroidetes J (SAM)-dependent - - - - - - - - - - - - Cons_hypoth95,Methyltransf_15 LIIFOLDO_01644 435591.BDI_1449 0.0 1531.0 COG5002@1|root,COG5002@2|Bacteria,4NZW6@976|Bacteroidetes,2G0AY@200643|Bacteroidia,231CT@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - HATPase_c,HisKA LIIFOLDO_01645 435591.BDI_0148 0.0 889.0 COG0166@1|root,COG0166@2|Bacteria,4NDV0@976|Bacteroidetes,2FP20@200643|Bacteroidia,22VVH@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the GPI family pgi - 5.3.1.9 ko:K01810 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 M00001,M00004,M00114 R02739,R02740,R03321 RC00376,RC00563 ko00000,ko00001,ko00002,ko01000,ko04147 - - - PGI LIIFOLDO_01646 435591.BDI_0149 9.58e-244 669.0 COG0240@1|root,COG0240@2|Bacteria,4NF4R@976|Bacteroidetes,2FND2@200643|Bacteroidia,22WB0@171551|Porphyromonadaceae 976|Bacteroidetes I Glycerol-3-phosphate dehydrogenase gpsA - 1.1.1.94 ko:K00057 ko00564,ko01110,map00564,map01110 - R00842,R00844 RC00029 ko00000,ko00001,ko01000 - - - NAD_Gly3P_dh_C,NAD_Gly3P_dh_N LIIFOLDO_01647 435591.BDI_0150 0.0 1094.0 COG1190@1|root,COG1190@2|Bacteria,4NDZN@976|Bacteroidetes,2FMXC@200643|Bacteroidia,22WSH@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the class-II aminoacyl-tRNA synthetase family lysS - 6.1.1.6 ko:K04567 ko00970,map00970 M00359,M00360 R03658 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - DUF4332,tRNA-synt_2,tRNA_anti-codon LIIFOLDO_01648 435591.BDI_0151 3.8e-166 465.0 COG1215@1|root,COG1215@2|Bacteria,4NPGR@976|Bacteroidetes,2FU9Z@200643|Bacteroidia,22Z9A@171551|Porphyromonadaceae 976|Bacteroidetes M N-terminal domain of galactosyltransferase - - - - - - - - - - - - Glyco_transf_7C LIIFOLDO_01649 435591.BDI_0152 2.58e-241 663.0 2DRRA@1|root,33CQW@2|Bacteria,4NWC7@976|Bacteroidetes,2FUWH@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01650 435591.BDI_0153 7.02e-258 713.0 COG1651@1|root,COG1651@2|Bacteria,4NH0U@976|Bacteroidetes,2FQGH@200643|Bacteroidia 976|Bacteroidetes O Thioredoxin - - - - - - - - - - - - Peptidase_C39,Thioredoxin_4,VKOR LIIFOLDO_01651 435591.BDI_0153 6.7e-72 232.0 COG1651@1|root,COG1651@2|Bacteria,4NH0U@976|Bacteroidetes,2FQGH@200643|Bacteroidia 976|Bacteroidetes O Thioredoxin - - - - - - - - - - - - Peptidase_C39,Thioredoxin_4,VKOR LIIFOLDO_01654 435591.BDI_0155 1.14e-135 384.0 COG1057@1|root,COG1057@2|Bacteria,4NFQI@976|Bacteroidetes,2FTAA@200643|Bacteroidia,22XY3@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) nadD - 2.7.7.18 ko:K00969 ko00760,ko01100,map00760,map01100 M00115 R00137,R03005 RC00002 ko00000,ko00001,ko00002,ko01000 - - - CTP_transf_like LIIFOLDO_01656 435591.BDI_0156 7.96e-133 376.0 COG0194@1|root,COG0194@2|Bacteria,4NEDG@976|Bacteroidetes,2FNWA@200643|Bacteroidia,22XMY@171551|Porphyromonadaceae 976|Bacteroidetes F Essential for recycling GMP and indirectly, cGMP gmk GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 ko:K00942 ko00230,ko01100,map00230,map01100 M00050 R00332,R02090 RC00002 ko00000,ko00001,ko00002,ko01000 - - - Guanylate_kin LIIFOLDO_01657 435591.BDI_0157 2.37e-195 543.0 COG1561@1|root,COG1561@2|Bacteria,4NEU4@976|Bacteroidetes,2FPBF@200643|Bacteroidia,22WDC@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF1732) - - - - - - - - - - - - DUF1732,YicC_N LIIFOLDO_01658 435591.BDI_0158 1.23e-163 458.0 COG1214@1|root,COG1214@2|Bacteria,4NDUR@976|Bacteroidetes,2FPYK@200643|Bacteroidia,22WRV@171551|Porphyromonadaceae 976|Bacteroidetes O Universal bacterial protein YeaZ yeaZ - - ko:K14742 - - - - ko00000,ko03016 - - - Peptidase_M22 LIIFOLDO_01660 435591.BDI_0160 1.04e-268 736.0 COG1883@1|root,COG1883@2|Bacteria,4NH3V@976|Bacteroidetes,2FMSY@200643|Bacteroidia,22WID@171551|Porphyromonadaceae 976|Bacteroidetes C Glutaconyl-CoA decarboxylase subunit beta oadB - 4.1.1.3 ko:K01572 ko00620,ko01100,map00620,map01100 - R00217 RC00040 ko00000,ko00001,ko01000,ko02000 3.B.1.1.1 - - OAD_beta LIIFOLDO_01661 435591.BDI_0161 3.31e-76 229.0 COG4770@1|root,COG4770@2|Bacteria,4NSWV@976|Bacteroidetes,2FRYI@200643|Bacteroidia,22YBV@171551|Porphyromonadaceae 976|Bacteroidetes I Biofilm PGA synthesis protein PgaD mmdC - - - - - - - - - - - Biotin_lipoyl LIIFOLDO_01662 435591.BDI_0162 9.36e-197 547.0 COG3630@1|root,COG3630@2|Bacteria,4NIHN@976|Bacteroidetes,2FMSV@200643|Bacteroidia,22W1S@171551|Porphyromonadaceae 976|Bacteroidetes C Oxaloacetate decarboxylase, gamma chain - - - - - - - - - - - - LTD,OAD_gamma LIIFOLDO_01663 435591.BDI_0163 0.0 1013.0 COG4799@1|root,COG4799@2|Bacteria,4NEMJ@976|Bacteroidetes,2FM4G@200643|Bacteroidia,22WJA@171551|Porphyromonadaceae 976|Bacteroidetes I Carboxyl transferase domain - - - - - - - - - - - - Carboxyl_trans LIIFOLDO_01664 435591.BDI_0164 2e-94 275.0 COG0346@1|root,COG0346@2|Bacteria,4NNGG@976|Bacteroidetes,2FRZS@200643|Bacteroidia,22XX8@171551|Porphyromonadaceae 976|Bacteroidetes E methylmalonyl-CoA epimerase mce - 5.1.99.1 ko:K05606 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 M00373,M00375,M00376,M00741 R02765,R09979 RC00780,RC02739 ko00000,ko00001,ko00002,ko01000 - - - Glyoxalase_4 LIIFOLDO_01665 435591.BDI_0165 0.0 1591.0 COG1629@1|root,COG4771@2|Bacteria,4PKKT@976|Bacteroidetes,2FR2R@200643|Bacteroidia,2323C@171551|Porphyromonadaceae 976|Bacteroidetes P CarboxypepD_reg-like domain - - - - - - - - - - - - CarbopepD_reg_2,Plug LIIFOLDO_01666 435591.BDI_0166 3.96e-130 370.0 COG0778@1|root,COG0778@2|Bacteria,4NMXW@976|Bacteroidetes,2FKZR@200643|Bacteroidia,22Y0W@171551|Porphyromonadaceae 976|Bacteroidetes C nitroreductase - - - - - - - - - - - - Nitroreductase LIIFOLDO_01667 435591.BDI_0167 2.58e-178 497.0 COG5495@1|root,COG5495@2|Bacteria,4NI4M@976|Bacteroidetes,2FMCQ@200643|Bacteroidia,22WAJ@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF2520) - - - - - - - - - - - - DUF2520,F420_oxidored,Rossmann-like LIIFOLDO_01668 435591.BDI_0168 1.2e-122 349.0 COG1778@1|root,COG1778@2|Bacteria,4NMHD@976|Bacteroidetes,2FTGQ@200643|Bacteroidia,22XSR@171551|Porphyromonadaceae 976|Bacteroidetes S 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase kdsC - 3.1.3.45 ko:K03270 ko00540,ko01100,map00540,map01100 M00063 R03350 RC00017 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Hydrolase_3 LIIFOLDO_01669 435591.BDI_0169 7.62e-138 389.0 COG0424@1|root,COG0424@2|Bacteria,4NNXV@976|Bacteroidetes,2FKYZ@200643|Bacteroidia,22XPA@171551|Porphyromonadaceae 976|Bacteroidetes D Maf-like protein maf - - ko:K06287 - - - - ko00000 - - - Maf LIIFOLDO_01671 435591.BDI_0171 1.21e-245 674.0 COG1477@1|root,COG1477@2|Bacteria,4NGEK@976|Bacteroidetes,2FKZQ@200643|Bacteroidia,22W78@171551|Porphyromonadaceae 976|Bacteroidetes H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein apbE - 2.7.1.180 ko:K03734 - - - - ko00000,ko01000 - - - ApbE LIIFOLDO_01672 435591.BDI_0172 0.0 1133.0 COG0129@1|root,COG0129@2|Bacteria,4NFHP@976|Bacteroidetes,2FMCC@200643|Bacteroidia,22WXM@171551|Porphyromonadaceae 976|Bacteroidetes EG Belongs to the IlvD Edd family - - 4.2.1.82,4.2.1.9 ko:K01687,ko:K22396 ko00040,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00040,map00290,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R01209,R02429,R04441,R05070 RC00468,RC00543,RC01714 ko00000,ko00001,ko00002,ko01000 - - - ILVD_EDD LIIFOLDO_01673 435591.BDI_0173 4.96e-127 362.0 COG1971@1|root,COG1971@2|Bacteria,4NSE0@976|Bacteroidetes,2FNXB@200643|Bacteroidia,22Y6I@171551|Porphyromonadaceae 976|Bacteroidetes P Probably functions as a manganese efflux pump mntP - - - - - - - - - - - Mntp LIIFOLDO_01674 435591.BDI_0174 5.73e-130 368.0 COG0778@1|root,COG0778@2|Bacteria,4NKRC@976|Bacteroidetes,2FSSA@200643|Bacteroidia,231HX@171551|Porphyromonadaceae 976|Bacteroidetes C Putative TM nitroreductase - - - - - - - - - - - - Nitroreductase,TM1586_NiRdase LIIFOLDO_01675 435591.BDI_0175 8.07e-233 640.0 COG1215@1|root,COG1215@2|Bacteria,4PKF3@976|Bacteroidetes,2G3EY@200643|Bacteroidia,23223@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyltransferase like family 2 - - - - - - - - - - - - Glycos_transf_2 LIIFOLDO_01676 435591.BDI_0176 4.66e-117 335.0 2C3H9@1|root,32ZPJ@2|Bacteria,4NW3R@976|Bacteroidetes,2FQZX@200643|Bacteroidia,22YTJ@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF4199) - - - - - - - - - - - - DUF4199 LIIFOLDO_01679 435591.BDI_0178 1.85e-101 301.0 28KGD@1|root,2ZA26@2|Bacteria,4NGT8@976|Bacteroidetes,2FM7M@200643|Bacteroidia,22XIG@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF2776) yhiM - - - - - - - - - - - DUF2776 LIIFOLDO_01680 435591.BDI_0178 6.13e-77 240.0 28KGD@1|root,2ZA26@2|Bacteria,4NGT8@976|Bacteroidetes,2FM7M@200643|Bacteroidia,22XIG@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF2776) yhiM - - - - - - - - - - - DUF2776 LIIFOLDO_01681 1235788.C802_01942 5.78e-47 155.0 2FHJH@1|root,349DE@2|Bacteria,4P5TD@976|Bacteroidetes,2FSFK@200643|Bacteroidia,4AQPU@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01682 435591.BDI_3613 5.82e-111 319.0 COG0776@1|root,COG0776@2|Bacteria,4P3H6@976|Bacteroidetes,2FNAQ@200643|Bacteroidia 976|Bacteroidetes L TIGRFAM DNA-binding protein, histone-like - - - - - - - - - - - - - LIIFOLDO_01684 435591.BDI_3612 1.25e-97 283.0 COG3023@1|root,COG3023@2|Bacteria,4P3SY@976|Bacteroidetes,2FSE2@200643|Bacteroidia 976|Bacteroidetes V N-acetylmuramoyl-L-alanine amidase - - - - - - - - - - - - Amidase_2 LIIFOLDO_01685 435591.BDI_3611 6.34e-90 263.0 2ESVK@1|root,33KDZ@2|Bacteria,4NZHI@976|Bacteroidetes,2FV4U@200643|Bacteroidia,230TB@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01686 435591.BDI_3610 1.74e-260 713.0 COG0250@1|root,COG0250@2|Bacteria,4NJD3@976|Bacteroidetes,2FMZ7@200643|Bacteroidia 976|Bacteroidetes K Participates in transcription elongation, termination and antitermination - - - - - - - - - - - - - LIIFOLDO_01687 435591.BDI_3609 1.74e-224 618.0 COG4974@1|root,COG4974@2|Bacteria,4NZW9@976|Bacteroidetes,2FSE0@200643|Bacteroidia 976|Bacteroidetes L Phage integrase, N-terminal SAM-like domain - - - - - - - - - - - - Phage_int_SAM_5,Phage_integrase LIIFOLDO_01688 435591.BDI_3608 0.0 1859.0 COG0341@1|root,COG0342@1|root,COG0341@2|Bacteria,COG0342@2|Bacteria,4NE1X@976|Bacteroidetes,2FMPX@200643|Bacteroidia,22WE8@171551|Porphyromonadaceae 976|Bacteroidetes U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA secD - - ko:K03072,ko:K12257 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 2.A.6.4,3.A.5.2,3.A.5.7 - - SecD_SecF,Sec_GG LIIFOLDO_01689 435591.BDI_3607 5.88e-230 633.0 2EAXQ@1|root,334YS@2|Bacteria,4NI39@976|Bacteroidetes,2FNTF@200643|Bacteroidia,22XQP@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4468) with TBP-like fold - - - ko:K03646 - - - - ko00000,ko02000 2.C.1.2 - - DUF4468 LIIFOLDO_01690 435591.BDI_3606 1.55e-128 365.0 2E80C@1|root,332EN@2|Bacteria,4NX72@976|Bacteroidetes,2FUR6@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function (DUF4468) with TBP-like fold - - - - - - - - - - - - DUF4468 LIIFOLDO_01691 435591.BDI_3605 3.74e-265 726.0 COG3568@1|root,COG3568@2|Bacteria,4NGUV@976|Bacteroidetes,2FNIX@200643|Bacteroidia,22WTP@171551|Porphyromonadaceae 976|Bacteroidetes S Endonuclease Exonuclease phosphatase family protein - - - - - - - - - - - - Exo_endo_phos LIIFOLDO_01692 435591.BDI_3604 1.2e-200 556.0 COG0705@1|root,COG0705@2|Bacteria,4NGVJ@976|Bacteroidetes,2FMGW@200643|Bacteroidia,22WSS@171551|Porphyromonadaceae 976|Bacteroidetes S Rhomboid family - - - - - - - - - - - - Rhomboid LIIFOLDO_01693 435591.BDI_3603 3.98e-170 475.0 COG0705@1|root,COG0705@2|Bacteria,4NIYR@976|Bacteroidetes,2FNMJ@200643|Bacteroidia,22Y0S@171551|Porphyromonadaceae 976|Bacteroidetes S membrane - - 3.4.21.105 ko:K09650 - - - - ko00000,ko01000,ko01002,ko03029 - - - Rhomboid LIIFOLDO_01694 435591.BDI_3602 4.8e-51 162.0 COG0776@1|root,COG0776@2|Bacteria,4NSK6@976|Bacteroidetes,2FTWW@200643|Bacteroidia,22YD0@171551|Porphyromonadaceae 976|Bacteroidetes L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions hupB - - ko:K03530 - - - - ko00000,ko03032,ko03036,ko03400 - - - Bac_DNA_binding LIIFOLDO_01695 435591.BDI_3601 0.0 1178.0 COG0018@1|root,COG0018@2|Bacteria,4NE7Q@976|Bacteroidetes,2FN06@200643|Bacteroidia,22VUX@171551|Porphyromonadaceae 976|Bacteroidetes J Arginyl-tRNA synthetase argS - 6.1.1.19 ko:K01887 ko00970,map00970 M00359,M00360 R03646 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 - - - Arg_tRNA_synt_N,DALR_1,tRNA-synt_1d LIIFOLDO_01696 435591.BDI_3600 2.1e-191 533.0 COG1633@1|root,COG1814@1|root,COG1633@2|Bacteria,COG1814@2|Bacteria,4NIYX@976|Bacteroidetes,2FMRI@200643|Bacteroidia,22XT5@171551|Porphyromonadaceae 976|Bacteroidetes S VIT family - - - - - - - - - - - - Rubrerythrin,VIT1 LIIFOLDO_01697 435591.BDI_3599 0.0 1509.0 COG0550@1|root,COG1754@1|root,COG0550@2|Bacteria,COG1754@2|Bacteria,4NF9S@976|Bacteroidetes,2FMSF@200643|Bacteroidia,22WGN@171551|Porphyromonadaceae 976|Bacteroidetes L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone topA - 5.99.1.2 ko:K03168 - - - - ko00000,ko01000,ko03032,ko03400 - - - Topoisom_bac,Toprim,Toprim_C_rpt LIIFOLDO_01698 435591.BDI_3598 1.02e-55 173.0 COG4235@1|root,COG4235@2|Bacteria,4NX05@976|Bacteroidetes,2G0BJ@200643|Bacteroidia,22YZA@171551|Porphyromonadaceae 976|Bacteroidetes O Tetratricopeptide repeat - - - - - - - - - - - - TPR_1,TPR_11 LIIFOLDO_01700 435591.BDI_3596 5.66e-278 760.0 COG2208@1|root,COG4753@1|root,COG2208@2|Bacteria,COG4753@2|Bacteria,4PM3Q@976|Bacteroidetes,2G2UW@200643|Bacteroidia 976|Bacteroidetes T Sigma factor PP2C-like phosphatases - - 3.1.3.3 ko:K07315 - - - - ko00000,ko01000,ko03021 - - - Response_reg,SpoIIE LIIFOLDO_01701 435591.BDI_3595 6.16e-200 554.0 COG4191@1|root,COG4191@2|Bacteria,4NEJX@976|Bacteroidetes,2FMR7@200643|Bacteroidia 976|Bacteroidetes T GHKL domain - - - - - - - - - - - - HATPase_c,HisKA LIIFOLDO_01702 435591.BDI_3594 2.95e-263 722.0 COG4191@1|root,COG4191@2|Bacteria,4NMC6@976|Bacteroidetes,2FQ5I@200643|Bacteroidia 976|Bacteroidetes T Histidine kinase-like ATPases - - - - - - - - - - - - HATPase_c,Y_Y_Y LIIFOLDO_01703 435591.BDI_3593 6e-238 656.0 COG4191@1|root,COG4191@2|Bacteria,4NMC6@976|Bacteroidetes,2FQ5I@200643|Bacteroidia 976|Bacteroidetes T Histidine kinase-like ATPases - - - - - - - - - - - - HATPase_c,Y_Y_Y LIIFOLDO_01704 435591.BDI_3592 0.0 1205.0 COG4206@1|root,COG4206@2|Bacteria,4NGYD@976|Bacteroidetes,2FNFI@200643|Bacteroidia,22X28@171551|Porphyromonadaceae 976|Bacteroidetes H Psort location OuterMembrane, score - - - - - - - - - - - - TonB_dep_Rec LIIFOLDO_01705 435591.BDI_3591 0.0 1605.0 COG0457@1|root,COG1729@1|root,COG4105@1|root,COG0457@2|Bacteria,COG1729@2|Bacteria,COG4105@2|Bacteria,4NE4W@976|Bacteroidetes,2FM3C@200643|Bacteroidia,22X5K@171551|Porphyromonadaceae 976|Bacteroidetes G Tetratricopeptide repeat protein - - - - - - - - - - - - TPR_16,TPR_2,TPR_21,TPR_6,TPR_8 LIIFOLDO_01706 435591.BDI_3590 1.71e-126 359.0 COG1051@1|root,COG1051@2|Bacteria,4NP2X@976|Bacteroidetes,2FMSZ@200643|Bacteroidia,22Y32@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the Nudix hydrolase family - - 3.6.1.55 ko:K03574 - - - - ko00000,ko01000,ko03400 - - - NUDIX,zf-NADH-PPase LIIFOLDO_01707 435591.BDI_3589 1.02e-232 640.0 COG1940@1|root,COG1940@2|Bacteria,4NFZ1@976|Bacteroidetes,2FNGN@200643|Bacteroidia,22WUD@171551|Porphyromonadaceae 976|Bacteroidetes G glucokinase glcK - 2.7.1.2 ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 M00001,M00549 R00299,R01600,R01786 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - ROK LIIFOLDO_01708 435591.BDI_3588 6.94e-92 268.0 COG0346@1|root,COG0346@2|Bacteria,4NPHB@976|Bacteroidetes,2FSJQ@200643|Bacteroidia,22XUZ@171551|Porphyromonadaceae 976|Bacteroidetes E Lactoylglutathione lyase gloA - 4.4.1.5 ko:K01759 ko00620,map00620 - R02530 RC00004,RC00740 ko00000,ko00001,ko01000 - - - Glyoxalase LIIFOLDO_01709 435591.BDI_2710 5.47e-167 466.0 COG0846@1|root,COG0846@2|Bacteria,4NE9Q@976|Bacteroidetes,2FNXN@200643|Bacteroidia,22VUN@171551|Porphyromonadaceae 976|Bacteroidetes K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form cobB - - ko:K12410 - - - - ko00000,ko01000 - - - SIR2 LIIFOLDO_01710 435591.BDI_2709 1.33e-223 615.0 2DU32@1|root,33NRG@2|Bacteria,4NY6A@976|Bacteroidetes,2FRW1@200643|Bacteroidia,22Z1I@171551|Porphyromonadaceae 976|Bacteroidetes S Fimbrillin-A associated anchor proteins Mfa1 and Mfa2 - GO:0005575,GO:0005623,GO:0008150,GO:0009279,GO:0009297,GO:0009987,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030030,GO:0030031,GO:0030312,GO:0030313,GO:0031975,GO:0043711,GO:0044085,GO:0044462,GO:0044464,GO:0071840,GO:0071944 - - - - - - - - - - Mfa2 LIIFOLDO_01711 435591.BDI_2708 0.0 919.0 2BY7T@1|root,2Z9ID@2|Bacteria,4NIFA@976|Bacteroidetes,2FR6K@200643|Bacteroidia,22YKF@171551|Porphyromonadaceae 976|Bacteroidetes S Major fimbrial subunit protein type IV, Fimbrillin, C-terminal - - - - - - - - - - - - Fimbrillin_C,P_gingi_FimA LIIFOLDO_01712 435591.BDI_2707 0.0 1399.0 28I7H@1|root,2Z8AE@2|Bacteria,4NKGD@976|Bacteroidetes,2FM0E@200643|Bacteroidia,231EB@171551|Porphyromonadaceae 976|Bacteroidetes S Major fimbrial subunit protein (FimA) - - - - - - - - - - - - P_gingi_FimA LIIFOLDO_01713 435591.BDI_2706 1.04e-136 387.0 COG0545@1|root,COG0545@2|Bacteria,4NDW4@976|Bacteroidetes,2FNCK@200643|Bacteroidia,22W5R@171551|Porphyromonadaceae 976|Bacteroidetes O Peptidyl-prolyl cis-trans isomerase - - 5.2.1.8 ko:K03772,ko:K03773 - - - - ko00000,ko01000,ko03110 - - - FKBP_C,FKBP_N LIIFOLDO_01714 435591.BDI_2705 3.52e-162 454.0 COG0545@1|root,COG0545@2|Bacteria,4NP7W@976|Bacteroidetes,2FM5J@200643|Bacteroidia,231KN@171551|Porphyromonadaceae 976|Bacteroidetes M peptidyl-prolyl cis-trans isomerase fkpB - 5.2.1.8 ko:K03772,ko:K03773 - - - - ko00000,ko01000,ko03110 - - - FKBP_C,FKBP_N LIIFOLDO_01715 435591.BDI_2704 2.32e-109 314.0 COG1522@1|root,COG1522@2|Bacteria,4NMEN@976|Bacteroidetes,2FMP2@200643|Bacteroidia,22XKX@171551|Porphyromonadaceae 976|Bacteroidetes K Transcriptional regulator asnC - - ko:K03718 - - - - ko00000,ko03000 - - - AsnC_trans_reg,HTH_24,HTH_AsnC-type LIIFOLDO_01716 435591.BDI_2703 0.0 909.0 COG1404@1|root,COG1404@2|Bacteria,4NEIJ@976|Bacteroidetes,2FNT5@200643|Bacteroidia,22W7I@171551|Porphyromonadaceae 976|Bacteroidetes O Subtilase family aprN - - - - - - - - - - - Peptidase_S8 LIIFOLDO_01717 435591.BDI_2702 2.71e-298 816.0 COG1570@1|root,COG1570@2|Bacteria,4NE64@976|Bacteroidetes,2FMMA@200643|Bacteroidia,22WD7@171551|Porphyromonadaceae 976|Bacteroidetes L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides xseA - 3.1.11.6 ko:K03601 ko03430,map03430 - - - ko00000,ko00001,ko01000,ko03400 - - - Exonuc_VII_L,tRNA_anti_2 LIIFOLDO_01718 435591.BDI_2701 1.02e-34 119.0 COG1722@1|root,COG1722@2|Bacteria,4NXJV@976|Bacteroidetes,2FVH6@200643|Bacteroidia,22YWF@171551|Porphyromonadaceae 976|Bacteroidetes L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides xseB - 3.1.11.6 ko:K03602 ko03430,map03430 - - - ko00000,ko00001,ko01000,ko03400 - - - Exonuc_VII_S LIIFOLDO_01719 435591.BDI_2700 1.76e-169 473.0 COG1211@1|root,COG1211@2|Bacteria,4NMB5@976|Bacteroidetes,2FM5H@200643|Bacteroidia,22XSS@171551|Porphyromonadaceae 976|Bacteroidetes I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) ispD GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 2.7.7.60 ko:K00991 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05633 RC00002 ko00000,ko00001,ko00002,ko01000 - - - IspD LIIFOLDO_01720 435591.BDI_2699 0.0 1377.0 COG1200@1|root,COG1200@2|Bacteria,4NDZV@976|Bacteroidetes,2FNKB@200643|Bacteroidia,22WQP@171551|Porphyromonadaceae 976|Bacteroidetes L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) recG - 3.6.4.12 ko:K03655 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - DEAD,Helicase_C,RecG_wedge LIIFOLDO_01721 435591.BDI_2698 1.98e-279 766.0 COG0739@1|root,COG1388@1|root,COG0739@2|Bacteria,COG1388@2|Bacteria,4NGHH@976|Bacteroidetes,2FMHT@200643|Bacteroidia,22XCK@171551|Porphyromonadaceae 976|Bacteroidetes M peptidase mepM_1 - - - - - - - - - - - LysM,Peptidase_M23 LIIFOLDO_01722 435591.BDI_2697 1.68e-126 360.0 28HFG@1|root,2Z7RJ@2|Bacteria,4NFNY@976|Bacteroidetes,2FKZK@200643|Bacteroidia,22X14@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of Unknown Function (DUF1599) - - - - - - - - - - - - DUF1599 LIIFOLDO_01723 435591.BDI_2696 0.0 862.0 COG2259@1|root,COG2259@2|Bacteria,4NGNF@976|Bacteroidetes,2G2Z3@200643|Bacteroidia,22W11@171551|Porphyromonadaceae 976|Bacteroidetes S DoxX family - - - - - - - - - - - - DoxX LIIFOLDO_01724 435591.BDI_2695 6.35e-177 493.0 COG0149@1|root,COG0149@2|Bacteria,4NE2F@976|Bacteroidetes,2FNEK@200643|Bacteroidia,22VV8@171551|Porphyromonadaceae 976|Bacteroidetes G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) tpiA GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003 R01015 RC00423 ko00000,ko00001,ko00002,ko01000,ko04147 - - - TIM LIIFOLDO_01725 435591.BDI_2694 8.5e-116 332.0 2E2TU@1|root,32XVZ@2|Bacteria,4NVA0@976|Bacteroidetes,2FUX1@200643|Bacteroidia,22YNI@171551|Porphyromonadaceae 976|Bacteroidetes S Sporulation related domain - - - - - - - - - - - - SPOR LIIFOLDO_01726 435591.BDI_2693 1.36e-137 389.0 COG0302@1|root,COG0302@2|Bacteria,4NFC2@976|Bacteroidetes,2FMYB@200643|Bacteroidia,22WSJ@171551|Porphyromonadaceae 976|Bacteroidetes F GTP cyclohydrolase 1 folE GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 ko:K01495 ko00790,ko01100,map00790,map01100 M00126,M00841,M00842,M00843 R00428,R04639,R05046,R05048 RC00263,RC00294,RC00323,RC00945,RC01188 ko00000,ko00001,ko00002,ko01000 - - - GTP_cyclohydroI LIIFOLDO_01727 435591.BDI_2692 1.04e-63 194.0 COG3041@1|root,COG3041@2|Bacteria,4NUUP@976|Bacteroidetes,2FUT1@200643|Bacteroidia 976|Bacteroidetes S TIGRFAM addiction module toxin component, YafQ family yafQ2 - - ko:K19157 - - - - ko00000,ko01000,ko02048 - - - YafQ_toxin LIIFOLDO_01728 999419.HMPREF1077_00040 2.71e-30 107.0 2A7PI@1|root,30WN0@2|Bacteria,4PA19@976|Bacteroidetes,2FVYD@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01729 435591.BDI_2690 0.0 1403.0 COG4206@1|root,COG4206@2|Bacteria,4PKNV@976|Bacteroidetes,2G0KH@200643|Bacteroidia,231DV@171551|Porphyromonadaceae 976|Bacteroidetes H Outer membrane protein beta-barrel family - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3,Plug LIIFOLDO_01730 435591.BDI_2689 1.04e-244 673.0 COG2972@1|root,COG2972@2|Bacteria,4NFJ1@976|Bacteroidetes,2FQYE@200643|Bacteroidia,22XJ5@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase - - - - - - - - - - - - His_kinase LIIFOLDO_01731 435591.BDI_2688 5.64e-161 451.0 COG3279@1|root,COG3279@2|Bacteria,4NF8U@976|Bacteroidetes,2FMI5@200643|Bacteroidia,22ZCF@171551|Porphyromonadaceae 976|Bacteroidetes T LytTr DNA-binding domain - - - - - - - - - - - - LytTR,Response_reg LIIFOLDO_01732 435591.BDI_2687 1.09e-296 808.0 COG2382@1|root,COG2382@2|Bacteria,4NFVV@976|Bacteroidetes,2FNXZ@200643|Bacteroidia,22XE3@171551|Porphyromonadaceae 976|Bacteroidetes P Carbohydrate-binding module 48 (Isoamylase N-terminal domain) - - - ko:K07214 - - - - ko00000 - - - CBM_48,Esterase LIIFOLDO_01733 435591.BDI_2686 3.96e-276 755.0 28TKX@1|root,2ZFUJ@2|Bacteria,4NKCT@976|Bacteroidetes,2G3EV@200643|Bacteroidia,22XSQ@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - LIIFOLDO_01734 435591.BDI_2685 0.0 1122.0 COG5107@1|root,COG5107@2|Bacteria,4NEPG@976|Bacteroidetes,2FNHC@200643|Bacteroidia,22WFC@171551|Porphyromonadaceae 976|Bacteroidetes A Domain of Unknown Function (DUF349) - - - - - - - - - - - - DUF349 LIIFOLDO_01735 435591.BDI_2684 9.45e-280 766.0 COG1883@1|root,COG1883@2|Bacteria,4NGCN@976|Bacteroidetes,2FNXC@200643|Bacteroidia,22WH7@171551|Porphyromonadaceae 976|Bacteroidetes C Na+-transporting oxaloacetate decarboxylase beta subunit - - 4.1.1.3 ko:K01572 ko00620,ko01100,map00620,map01100 - R00217 RC00040 ko00000,ko00001,ko01000,ko02000 3.B.1.1.1 - - OAD_beta LIIFOLDO_01736 435591.BDI_2683 8.4e-70 227.0 COG0511@1|root,COG5016@1|root,COG0511@2|Bacteria,COG5016@2|Bacteria,4NEQV@976|Bacteroidetes,2FMXG@200643|Bacteroidia,22WMD@171551|Porphyromonadaceae 976|Bacteroidetes C Oxaloacetate decarboxylase - - 6.4.1.1 ko:K01960 ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230 M00173,M00620 R00344 RC00040,RC00367 ko00000,ko00001,ko00002,ko01000 - - - Biotin_lipoyl,Biotin_lipoyl_2,HMGL-like,PYC_OADA LIIFOLDO_01737 435591.BDI_1916 1.35e-163 457.0 COG2830@1|root,COG2830@2|Bacteria,4NSQK@976|Bacteroidetes,2FTTG@200643|Bacteroidia,22YIE@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF452) - - 3.1.1.85 ko:K09789 ko00780,ko01100,map00780,map01100 M00572 R09725 RC00460,RC00461 ko00000,ko00001,ko00002,ko01000 - - - DUF452 LIIFOLDO_01738 435591.BDI_1917 9.1e-187 518.0 COG4106@1|root,COG4106@2|Bacteria,4PKFJ@976|Bacteroidetes,2G3FE@200643|Bacteroidia,22Y6P@171551|Porphyromonadaceae 976|Bacteroidetes H Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway bioC - 2.1.1.197 ko:K02169 ko00780,ko01100,map00780,map01100 M00572 R09543 RC00003,RC00460 ko00000,ko00001,ko00002,ko01000 - - - Methyltransf_11,Methyltransf_23 LIIFOLDO_01739 435591.BDI_1918 1.34e-161 452.0 COG0132@1|root,COG0132@2|Bacteria,4NGKI@976|Bacteroidetes,2FM6V@200643|Bacteroidia,22XR0@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring bioD - 6.3.3.3 ko:K01935 ko00780,ko01100,map00780,map01100 M00123,M00573,M00577 R03182 RC00868 ko00000,ko00001,ko00002,ko01000 - - - AAA_26 LIIFOLDO_01740 435591.BDI_1919 6.58e-88 258.0 COG3339@1|root,COG3339@2|Bacteria,4NVY8@976|Bacteroidetes,2FUXD@200643|Bacteroidia,22Z0P@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF1232) - - - - - - - - - - - - DUF1232 LIIFOLDO_01741 435591.BDI_1920 0.0 2034.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2G3FU@200643|Bacteroidia,2324D@171551|Porphyromonadaceae 976|Bacteroidetes P Psort location OuterMembrane, score - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_01742 435591.BDI_1921 0.0 997.0 COG3193@1|root,COG3193@2|Bacteria,4NENU@976|Bacteroidetes,2G04D@200643|Bacteroidia,23239@171551|Porphyromonadaceae 976|Bacteroidetes S Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_01743 435591.BDI_1922 4.07e-133 377.0 COG3059@1|root,COG3059@2|Bacteria,4NG9V@976|Bacteroidetes,2FMSP@200643|Bacteroidia,22Y9K@171551|Porphyromonadaceae 976|Bacteroidetes S membrane ykgB - - - - - - - - - - - DUF417 LIIFOLDO_01744 435591.BDI_1923 5.47e-196 543.0 COG2207@1|root,COG2207@2|Bacteria,4NIW3@976|Bacteroidetes,2FKZW@200643|Bacteroidia,22ZQ0@171551|Porphyromonadaceae 976|Bacteroidetes K Helix-turn-helix domain - - - - - - - - - - - - HTH_18 LIIFOLDO_01745 435591.BDI_1924 8.95e-94 275.0 COG3118@1|root,COG3118@2|Bacteria,4NQNX@976|Bacteroidetes,2FSPP@200643|Bacteroidia,22Y0M@171551|Porphyromonadaceae 976|Bacteroidetes O Thioredoxin trxA2 - - - - - - - - - - - Thioredoxin LIIFOLDO_01746 435591.BDI_1925 1.08e-218 603.0 28NPZ@1|root,2ZBPQ@2|Bacteria,4NN3K@976|Bacteroidetes,2FPEH@200643|Bacteroidia,22Y6X@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - OMP_b-brl_2 LIIFOLDO_01747 435591.BDI_1926 2.82e-105 304.0 2CFJZ@1|root,32SKC@2|Bacteria,4NTV9@976|Bacteroidetes,2G38N@200643|Bacteroidia,22YGH@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01748 435591.BDI_1927 9.36e-124 353.0 COG1413@1|root,COG1413@2|Bacteria,4NXQU@976|Bacteroidetes,2FTDB@200643|Bacteroidia,22Z03@171551|Porphyromonadaceae 976|Bacteroidetes C lyase activity - - - - - - - - - - - - - LIIFOLDO_01749 435591.BDI_1928 3.36e-118 339.0 COG1595@1|root,COG1595@2|Bacteria,4NS8T@976|Bacteroidetes,2FRUY@200643|Bacteroidia,22YCS@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 LIIFOLDO_01751 435591.BDI_1930 1.01e-156 440.0 COG0745@1|root,COG0745@2|Bacteria,4NGVV@976|Bacteroidetes,2FMSE@200643|Bacteroidia,22XFJ@171551|Porphyromonadaceae 976|Bacteroidetes T Transcriptional regulator - - - - - - - - - - - - Response_reg,Trans_reg_C LIIFOLDO_01752 435591.BDI_1931 4.93e-304 829.0 COG0642@1|root,COG0642@2|Bacteria,4NEW4@976|Bacteroidetes,2FMVB@200643|Bacteroidia,22W83@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase qseC - - - - - - - - - - - HATPase_c,HisKA LIIFOLDO_01753 435591.BDI_1932 5.15e-100 290.0 COG3212@1|root,COG3212@2|Bacteria,4NQW5@976|Bacteroidetes,2FS3X@200643|Bacteroidia,230SD@171551|Porphyromonadaceae 976|Bacteroidetes S Putative beta-lactamase-inhibitor-like, PepSY-like - - - - - - - - - - - - PepSY_like LIIFOLDO_01754 435591.BDI_1933 3.33e-207 572.0 295Z7@1|root,2ZTA0@2|Bacteria,4NP7A@976|Bacteroidetes,2FPCX@200643|Bacteroidia,22ZC3@171551|Porphyromonadaceae 976|Bacteroidetes S Putative beta-lactamase-inhibitor-like, PepSY-like - - - - - - - - - - - - PepSY_like LIIFOLDO_01755 435591.BDI_1934 1.35e-148 418.0 2C9DF@1|root,333A7@2|Bacteria,4NSB0@976|Bacteroidetes,2FMUV@200643|Bacteroidia,22YFC@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3256) - - - - - - - - - - - - DUF3256 LIIFOLDO_01756 435591.BDI_1935 5.61e-194 539.0 COG0697@1|root,COG0697@2|Bacteria,4NHQX@976|Bacteroidetes,2FM74@200643|Bacteroidia,22VZY@171551|Porphyromonadaceae 976|Bacteroidetes EG EamA-like transporter family - - - ko:K08978 - - - - ko00000,ko02000 2.A.7.2 - - EamA LIIFOLDO_01757 435591.BDI_1936 3.57e-188 521.0 COG0101@1|root,COG0101@2|Bacteria,4NFDC@976|Bacteroidetes,2FP2H@200643|Bacteroidia,22WF1@171551|Porphyromonadaceae 976|Bacteroidetes J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs truA GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 ko:K06173 - - - - ko00000,ko01000,ko03016 - - - PseudoU_synth_1 LIIFOLDO_01758 435591.BDI_1937 0.0 988.0 COG0490@1|root,COG2985@1|root,COG0490@2|Bacteria,COG2985@2|Bacteria,4NEBW@976|Bacteroidetes,2FMDF@200643|Bacteroidia,22XD6@171551|Porphyromonadaceae 976|Bacteroidetes P Predicted Permease Membrane Region - - - ko:K07085 - - - - ko00000 2.A.81 - - Asp-Al_Ex,TrkA_C LIIFOLDO_01759 435591.BDI_1938 0.0 1355.0 COG3534@1|root,COG3534@2|Bacteria,4NGKW@976|Bacteroidetes,2FM0F@200643|Bacteroidia,22WCS@171551|Porphyromonadaceae 976|Bacteroidetes G PFAM alpha-L-arabinofuranosidase domain protein - - 3.2.1.55 ko:K01209 ko00520,map00520 - R01762 - ko00000,ko00001,ko01000 - GH51 - Alpha-L-AF_C,CBM_4_9 LIIFOLDO_01760 435591.BDI_1939 3.23e-90 263.0 COG2315@1|root,COG2315@2|Bacteria,4NNPR@976|Bacteroidetes,2FSJ2@200643|Bacteroidia,22Y27@171551|Porphyromonadaceae 976|Bacteroidetes S YjbR - - - - - - - - - - - - YjbR LIIFOLDO_01761 435591.BDI_1940 0.0 1400.0 COG0210@1|root,COG0507@1|root,COG0210@2|Bacteria,COG0507@2|Bacteria,4NF6J@976|Bacteroidetes,2FM19@200643|Bacteroidia,22X68@171551|Porphyromonadaceae 976|Bacteroidetes L COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member uvrD2 - - - - - - - - - - - HRDC,HTH_40,Herpes_Helicase,PIF1,UvrD_C_2 LIIFOLDO_01762 435591.BDI_1941 2.05e-310 848.0 COG0477@1|root,COG2814@2|Bacteria,4NG27@976|Bacteroidetes,2FNG3@200643|Bacteroidia,22W89@171551|Porphyromonadaceae 976|Bacteroidetes EGP Sugar (and other) transporter - - - ko:K08169 - - - - ko00000,ko02000 2.A.1.3.17 - - MFS_1,Sugar_tr LIIFOLDO_01763 435591.BDI_1942 4.67e-139 394.0 2DVBG@1|root,32UZ2@2|Bacteria,4NSV1@976|Bacteroidetes,2FPAK@200643|Bacteroidia,22YFN@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4923) - - - - - - - - - - - - DUF4923 LIIFOLDO_01764 435591.BDI_1943 3.07e-16 77.8 COG1164@1|root,COG1164@2|Bacteria,4NFV3@976|Bacteroidetes,2FMG8@200643|Bacteroidia,22XF5@171551|Porphyromonadaceae 976|Bacteroidetes E Oligoendopeptidase f - - - - - - - - - - - - - LIIFOLDO_01765 435591.BDI_1943 0.0 1140.0 COG1164@1|root,COG1164@2|Bacteria,4NFV3@976|Bacteroidetes,2FMG8@200643|Bacteroidia,22XF5@171551|Porphyromonadaceae 976|Bacteroidetes E Oligoendopeptidase f - - - - - - - - - - - - - LIIFOLDO_01766 435591.BDI_1944 2.44e-242 665.0 COG0191@1|root,COG0191@2|Bacteria,4NF5C@976|Bacteroidetes,2FMMR@200643|Bacteroidia,22WHF@171551|Porphyromonadaceae 976|Bacteroidetes G Catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate fba - 4.1.2.13 ko:K01624 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00003,M00165,M00167,M00344,M00345 R01068,R01070,R01829,R02568 RC00438,RC00439,RC00603,RC00604 ko00000,ko00001,ko00002,ko01000 - - - F_bP_aldolase LIIFOLDO_01768 435591.BDI_3359 2.38e-258 711.0 COG0628@1|root,COG0628@2|Bacteria,4NFHZ@976|Bacteroidetes,2FN2B@200643|Bacteroidia,22X4Y@171551|Porphyromonadaceae 976|Bacteroidetes S Permease - - - - - - - - - - - - AI-2E_transport LIIFOLDO_01769 435591.BDI_3358 0.0 951.0 COG2027@1|root,COG2027@2|Bacteria,4NGIQ@976|Bacteroidetes,2FM0Y@200643|Bacteroidia,22WU4@171551|Porphyromonadaceae 976|Bacteroidetes M D-alanyl-D-alanine carboxypeptidase dacB - 3.4.16.4 ko:K07259 ko00550,map00550 - - - ko00000,ko00001,ko01000,ko01002,ko01011 - - - Peptidase_S13 LIIFOLDO_01770 435591.BDI_3357 5.84e-173 483.0 COG3279@1|root,COG3279@2|Bacteria,4NI3K@976|Bacteroidetes,2FMT1@200643|Bacteroidia,22WEI@171551|Porphyromonadaceae 976|Bacteroidetes KT LytTr DNA-binding domain yehT_1 - - - - - - - - - - - LytTR,Response_reg LIIFOLDO_01771 435591.BDI_3356 4.7e-263 719.0 COG2972@1|root,COG2972@2|Bacteria,4NGQZ@976|Bacteroidetes,2FMGN@200643|Bacteroidia,22WQN@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase cheA - - - - - - - - - - - HATPase_c_5,His_kinase LIIFOLDO_01772 435591.BDI_3355 8.7e-278 761.0 COG0577@1|root,COG0577@2|Bacteria,4NEBD@976|Bacteroidetes,2FM6F@200643|Bacteroidia,22WK8@171551|Porphyromonadaceae 976|Bacteroidetes V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD LIIFOLDO_01773 435591.BDI_3354 2.11e-168 471.0 COG1136@1|root,COG1136@2|Bacteria,4NE5N@976|Bacteroidetes,2FPB3@200643|Bacteroidia,22VYF@171551|Porphyromonadaceae 976|Bacteroidetes V ATPases associated with a variety of cellular activities - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran LIIFOLDO_01774 435591.BDI_3353 2.67e-273 750.0 COG0845@1|root,COG0845@2|Bacteria,4NFT4@976|Bacteroidetes,2FN2G@200643|Bacteroidia,22W7Z@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K02005 - - - - ko00000 - - - HlyD_D23 LIIFOLDO_01775 435591.BDI_3352 1.25e-300 822.0 COG1538@1|root,COG1538@2|Bacteria,4NEEN@976|Bacteroidetes,2FM5G@200643|Bacteroidia,22XC6@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 M00325,M00326,M00339,M00571,M00575,M00646,M00647,M00696,M00697,M00709,M00720,M00821 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 1.B.17,2.A.6.2 - - OEP LIIFOLDO_01776 435591.BDI_3351 1.33e-124 355.0 COG2059@1|root,COG2059@2|Bacteria,4NNF5@976|Bacteroidetes,2FP4K@200643|Bacteroidia,22XY1@171551|Porphyromonadaceae 976|Bacteroidetes P Chromate transporter - - - ko:K07240 - - - - ko00000,ko02000 2.A.51.1 - - Chromate_transp LIIFOLDO_01777 435591.BDI_3350 1.1e-119 342.0 COG2059@1|root,COG2059@2|Bacteria,4NNZ1@976|Bacteroidetes,2FPBG@200643|Bacteroidia,22XYA@171551|Porphyromonadaceae 976|Bacteroidetes P Chromate transporter - - - ko:K07240 - - - - ko00000,ko02000 2.A.51.1 - - Chromate_transp LIIFOLDO_01778 435591.BDI_3349 0.0 1021.0 COG0793@1|root,COG0793@2|Bacteria,4NEGV@976|Bacteroidetes,2FN98@200643|Bacteroidia,22WA5@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the peptidase S41A family ctpA - 3.4.21.102 ko:K03797 - - - - ko00000,ko01000,ko01002 - - - PDZ_2,Peptidase_S41 LIIFOLDO_01779 435591.BDI_3348 7.73e-109 313.0 COG0669@1|root,COG0669@2|Bacteria,4NM84@976|Bacteroidetes,2FT6A@200643|Bacteroidia,22Y2B@171551|Porphyromonadaceae 976|Bacteroidetes H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate coaD - 2.7.7.3 ko:K00954 ko00770,ko01100,map00770,map01100 M00120 R03035 RC00002 ko00000,ko00001,ko00002,ko01000 - - - CTP_transf_like LIIFOLDO_01780 435591.BDI_3347 0.0 1222.0 COG0187@1|root,COG0187@2|Bacteria,4NF18@976|Bacteroidetes,2FMMD@200643|Bacteroidia,22VXW@171551|Porphyromonadaceae 976|Bacteroidetes L DNA topoisomerase (ATP-hydrolyzing) parE - - ko:K02622 - - - - ko00000,ko01000,ko02048,ko03032,ko03036 - - - DNA_gyraseB,DNA_gyraseB_C,HATPase_c,Toprim LIIFOLDO_01781 435591.BDI_3346 1.1e-278 761.0 COG0454@1|root,COG0456@2|Bacteria,4NFWE@976|Bacteroidetes,2FNG4@200643|Bacteroidia,22WRZ@171551|Porphyromonadaceae 976|Bacteroidetes K Psort location Cytoplasmic, score 8.96 yghO - - - - - - - - - - - Acetyltransf_1 LIIFOLDO_01782 435591.BDI_3345 2.65e-234 643.0 COG3386@1|root,COG3386@2|Bacteria,4NMJX@976|Bacteroidetes,2FRZF@200643|Bacteroidia,22ZI2@171551|Porphyromonadaceae 976|Bacteroidetes G SMP-30/Gluconolaconase/LRE-like region - - - ko:K14274 ko00040,map00040 - R02427 RC00713 ko00000,ko00001,ko01000 - - - SGL LIIFOLDO_01783 435591.BDI_3344 0.0 1408.0 COG0557@1|root,COG0557@2|Bacteria,4NE7T@976|Bacteroidetes,2FMM6@200643|Bacteroidia,22VY8@171551|Porphyromonadaceae 976|Bacteroidetes J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs rnr - - ko:K12573,ko:K12585 ko03018,map03018 M00391 - - ko00000,ko00001,ko00002,ko01000,ko03016,ko03019 - - - OB_RNB,RNB,S1 LIIFOLDO_01784 999419.HMPREF1077_01715 8.56e-34 117.0 2C4GM@1|root,33DB5@2|Bacteria,4NY7G@976|Bacteroidetes,2FW01@200643|Bacteroidia,22YXA@171551|Porphyromonadaceae 976|Bacteroidetes S Immunity protein 17 - - - - - - - - - - - - Imm17 LIIFOLDO_01785 435591.BDI_3343 1.1e-97 283.0 COG0802@1|root,COG0802@2|Bacteria,4NS89@976|Bacteroidetes,2FS1V@200643|Bacteroidia,22XWD@171551|Porphyromonadaceae 976|Bacteroidetes S Hydrolase, P-loop family yjeE - - ko:K06925 - - - - ko00000,ko03016 - - - TsaE LIIFOLDO_01786 435591.BDI_3342 0.0 1031.0 COG0745@1|root,COG0745@2|Bacteria,4PM6N@976|Bacteroidetes,2G0CY@200643|Bacteroidia,2323Q@171551|Porphyromonadaceae 976|Bacteroidetes T PglZ domain - - - - - - - - - - - - PglZ,Response_reg LIIFOLDO_01788 435591.BDI_3341 1.1e-97 283.0 COG1672@1|root,COG1672@2|Bacteria,4NIJ4@976|Bacteroidetes,2FM14@200643|Bacteroidia,22VXI@171551|Porphyromonadaceae 976|Bacteroidetes S Predicted AAA-ATPase - - - - - - - - - - - - AAA-ATPase_like,PDDEXK_9 LIIFOLDO_01789 435591.BDI_3340 2.12e-99 290.0 COG1595@1|root,COG1595@2|Bacteria,4NQZK@976|Bacteroidetes,2FM20@200643|Bacteroidia 976|Bacteroidetes K RNA polymerase sigma-70 factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 LIIFOLDO_01790 435591.BDI_3339 1.55e-222 613.0 COG3712@1|root,COG3712@2|Bacteria,4NKTC@976|Bacteroidetes,2FMS6@200643|Bacteroidia,2308R@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR LIIFOLDO_01791 435591.BDI_3338 0.0 1704.0 COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,2FW53@200643|Bacteroidia,22W05@171551|Porphyromonadaceae 976|Bacteroidetes H TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec LIIFOLDO_01792 435591.BDI_3338 3.39e-84 273.0 COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,2FW53@200643|Bacteroidia,22W05@171551|Porphyromonadaceae 976|Bacteroidetes H TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec LIIFOLDO_01793 435591.BDI_3337 0.0 1123.0 COG3637@1|root,COG3637@2|Bacteria,4NE4Y@976|Bacteroidetes,2FQHP@200643|Bacteroidia,23250@171551|Porphyromonadaceae 976|Bacteroidetes M SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_01794 435591.BDI_0208 0.0 1317.0 COG3408@1|root,COG3408@2|Bacteria,4NF09@976|Bacteroidetes,2FMEX@200643|Bacteroidia,22X3H@171551|Porphyromonadaceae 976|Bacteroidetes G Glycogen debranching enzyme - - - - - - - - - - - - GDE_C,GDE_N LIIFOLDO_01795 435591.BDI_0209 2.96e-316 860.0 COG0438@1|root,COG0438@2|Bacteria,4NEWR@976|Bacteroidetes,2FMW0@200643|Bacteroidia,22WJ9@171551|Porphyromonadaceae 976|Bacteroidetes M Starch synthase catalytic domain gmhA - 2.4.1.346 ko:K13668 - - R11703,R11704 - ko00000,ko01000,ko01003 - GT4 - Glyco_transf_4,Glyco_transf_5,Glycos_transf_1 LIIFOLDO_01796 435591.BDI_0210 7.42e-314 854.0 COG1449@1|root,COG1449@2|Bacteria,4NFXW@976|Bacteroidetes,2FMRY@200643|Bacteroidia,22X3U@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the glycosyl hydrolase 57 family amyA - 3.2.1.1 ko:K07405 ko00500,ko01100,map00500,map01100 - R02108,R02112,R11262 - ko00000,ko00001,ko01000 - GH57 - Glyco_hydro_57 LIIFOLDO_01797 435591.BDI_0211 0.0 915.0 28NG9@1|root,2ZCA6@2|Bacteria,4NMQX@976|Bacteroidetes,2G2BV@200643|Bacteroidia,22XUS@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4270) - - - - - - - - - - - - DUF4270 LIIFOLDO_01798 435591.BDI_0212 5.94e-198 548.0 COG0297@1|root,COG0297@2|Bacteria,4NFP8@976|Bacteroidetes,2FN7D@200643|Bacteroidia,22X24@171551|Porphyromonadaceae 976|Bacteroidetes G synthase glgA - 2.4.1.21 ko:K00703 ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026 M00565 R02421 RC00005 ko00000,ko00001,ko00002,ko01000,ko01003 - GT5 - Glyco_transf_5 LIIFOLDO_01799 435591.BDI_0213 5.97e-205 566.0 COG0414@1|root,COG0414@2|Bacteria,4NFT9@976|Bacteroidetes,2FN90@200643|Bacteroidia,22X8F@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate panC GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 ko:K01918 ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110 M00119 R02473 RC00096,RC00141 ko00000,ko00001,ko00002,ko01000 - - - Pantoate_ligase LIIFOLDO_01800 435591.BDI_0214 1.77e-74 223.0 COG0853@1|root,COG0853@2|Bacteria,4NQ42@976|Bacteroidetes,2FSH0@200643|Bacteroidia,22XW8@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine panD - 4.1.1.11 ko:K01579 ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110 M00119 R00489 RC00299 ko00000,ko00001,ko00002,ko01000 - - - Asp_decarbox LIIFOLDO_01801 435591.BDI_0215 1.1e-295 809.0 COG0534@1|root,COG0534@2|Bacteria,4NFIR@976|Bacteroidetes,2FMSA@200643|Bacteroidia,22X5G@171551|Porphyromonadaceae 976|Bacteroidetes V COG0534 Na -driven multidrug efflux pump - - - - - - - - - - - - MatE LIIFOLDO_01802 435591.BDI_0216 7.13e-100 289.0 COG0735@1|root,COG0735@2|Bacteria,4NQND@976|Bacteroidetes,2FS2D@200643|Bacteroidia,22Y4N@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the Fur family - - - ko:K03711 - - - - ko00000,ko03000 - - - FUR LIIFOLDO_01803 435591.BDI_0217 0.0 1205.0 COG2217@1|root,COG2217@2|Bacteria,4NERS@976|Bacteroidetes,2FP0P@200643|Bacteroidia,22WFG@171551|Porphyromonadaceae 976|Bacteroidetes P cadmium-exporting ATPase cadA - 3.6.3.3,3.6.3.5 ko:K01534 - - - - ko00000,ko01000 3.A.3.6 - - E1-E2_ATPase,Hydrolase LIIFOLDO_01804 435591.BDI_0218 6.05e-307 838.0 COG0541@1|root,COG0541@2|Bacteria,4NDZ2@976|Bacteroidetes,2FNSI@200643|Bacteroidia,22WC4@171551|Porphyromonadaceae 976|Bacteroidetes U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY ffh - 3.6.5.4 ko:K03106 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko01000,ko02044 3.A.5.1,3.A.5.2,3.A.5.7,3.A.5.8,3.A.5.9 - - SRP54,SRP54_N,SRP_SPB LIIFOLDO_01805 435591.BDI_0219 6.23e-212 585.0 COG0190@1|root,COG0190@2|Bacteria,4NEJP@976|Bacteroidetes,2FMNT@200643|Bacteroidia,22X77@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate folD GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 M00140,M00377 R01220,R01655 RC00202,RC00578 ko00000,ko00001,ko00002,ko01000 - - - THF_DHG_CYH,THF_DHG_CYH_C LIIFOLDO_01807 435591.BDI_0222 0.0 1025.0 COG2234@1|root,COG2234@2|Bacteria,4NE66@976|Bacteroidetes,2FPXP@200643|Bacteroidia 976|Bacteroidetes S Peptidase family M28 - - - - - - - - - - - - PA,Peptidase_M28 LIIFOLDO_01808 435591.BDI_0223 8.32e-79 234.0 2DE84@1|root,2ZKY4@2|Bacteria,4P8S2@976|Bacteroidetes,2FW16@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01809 435591.BDI_0224 1.01e-255 702.0 COG0845@1|root,COG0845@2|Bacteria,4NIP7@976|Bacteroidetes,2FQAJ@200643|Bacteroidia,22XSP@171551|Porphyromonadaceae 976|Bacteroidetes M Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - ko:K15727 - - - - ko00000,ko02000 8.A.1.2.1 - - HlyD_D23 LIIFOLDO_01810 435591.BDI_0225 0.0 1977.0 COG3696@1|root,COG3696@2|Bacteria,4P36A@976|Bacteroidetes,2FMH3@200643|Bacteroidia,22VYK@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - ko:K15726 - - - - ko00000,ko02000 2.A.6.1.2 - - ACR_tran LIIFOLDO_01811 435591.BDI_0226 2.64e-282 774.0 COG1538@1|root,COG1538@2|Bacteria,4NGT5@976|Bacteroidetes,2FPRG@200643|Bacteroidia,22XER@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein czcC_2 - - ko:K15725 - - - - ko00000,ko02000 1.B.17.2.2 - - OEP LIIFOLDO_01813 435591.BDI_0228 2.13e-162 457.0 COG0716@1|root,COG1149@1|root,COG0716@2|Bacteria,COG1149@2|Bacteria,4NPJC@976|Bacteroidetes,2G08U@200643|Bacteroidia,231PC@171551|Porphyromonadaceae 976|Bacteroidetes C 4Fe-4S dicluster domain - - - - - - - - - - - - Fer4 LIIFOLDO_01814 435591.BDI_0229 1.52e-238 655.0 COG0526@1|root,COG0526@2|Bacteria,4NEX3@976|Bacteroidetes,2FM3J@200643|Bacteroidia,231UD@171551|Porphyromonadaceae 976|Bacteroidetes CO Domain of unknown function (DUF4369) - - - - - - - - - - - - AhpC-TSA,DUF4369 LIIFOLDO_01815 435591.BDI_0230 0.0 2296.0 COG3250@1|root,COG3250@2|Bacteria,4NF3W@976|Bacteroidetes,2FM0P@200643|Bacteroidia,22VUW@171551|Porphyromonadaceae 976|Bacteroidetes G beta-galactosidase - - 3.2.1.23 ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 - R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 - - - Bgal_small_N,DUF4981,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N LIIFOLDO_01816 435591.BDI_0231 8.62e-126 358.0 2ARAZ@1|root,31GKZ@2|Bacteria,4NKJD@976|Bacteroidetes,2FPQT@200643|Bacteroidia,22Y6A@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF3332) - - - - - - - - - - - - DUF3332 LIIFOLDO_01818 435591.BDI_3090 1.64e-286 781.0 COG3391@1|root,COG3391@2|Bacteria,4NNMZ@976|Bacteroidetes,2FS03@200643|Bacteroidia,22YMN@171551|Porphyromonadaceae 976|Bacteroidetes S 6-bladed beta-propeller - - - - - - - - - - - - DUF5128 LIIFOLDO_01819 435591.BDI_3091 5.31e-241 662.0 2EB6B@1|root,33571@2|Bacteria,4NUZD@976|Bacteroidetes,2FV59@200643|Bacteroidia,22YYC@171551|Porphyromonadaceae 976|Bacteroidetes S TolB-like 6-blade propeller-like - - - - - - - - - - - - TolB_like LIIFOLDO_01820 435591.BDI_3092 5.26e-216 596.0 COG1045@1|root,COG1045@2|Bacteria,4NGZ7@976|Bacteroidetes,2FM9U@200643|Bacteroidia,22XAZ@171551|Porphyromonadaceae 976|Bacteroidetes E Serine acetyltransferase cysE - 2.3.1.30 ko:K00640 ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111 M00021 R00586 RC00004,RC00041 ko00000,ko00001,ko00002,ko01000 - - - Hexapep,SATase_N LIIFOLDO_01821 435591.BDI_3093 0.0 1018.0 COG0116@1|root,COG0116@2|Bacteria,4NFJM@976|Bacteroidetes,2FMNN@200643|Bacteroidia,22WIQ@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the methyltransferase superfamily rlmL - - ko:K07444 - - - - ko00000,ko01000 - - - THUMP,UPF0020 LIIFOLDO_01822 435591.BDI_3094 0.0 1498.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,4NF7I@976|Bacteroidetes,2FMJD@200643|Bacteroidia,22W5C@171551|Porphyromonadaceae 976|Bacteroidetes E Peptidase, S9A B C family, catalytic domain protein pepX2 - 3.4.14.12,3.4.14.5 ko:K01278,ko:K18574 ko04974,map04974 - - - ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 - - - DPPIV_N,Peptidase_S9 LIIFOLDO_01823 435591.BDI_3095 1.65e-302 825.0 COG0151@1|root,COG0151@2|Bacteria,4NEUN@976|Bacteroidetes,2FN59@200643|Bacteroidia,22WGM@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the GARS family purD - 6.3.4.13 ko:K01945 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04144 RC00090,RC00166 ko00000,ko00001,ko00002,ko01000 - - - GARS_A,GARS_C,GARS_N LIIFOLDO_01824 435591.BDI_3096 1.54e-248 681.0 2DQYE@1|root,339DJ@2|Bacteria,4NSHZ@976|Bacteroidetes,2FMS8@200643|Bacteroidia,22YSV@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - - LIIFOLDO_01825 435591.BDI_3097 1.53e-102 296.0 COG1238@1|root,COG1238@2|Bacteria,4NQAX@976|Bacteroidetes,2FRY9@200643|Bacteroidia,22Y6N@171551|Porphyromonadaceae 976|Bacteroidetes S SNARE associated Golgi protein - - - - - - - - - - - - SNARE_assoc LIIFOLDO_01826 435591.BDI_3098 1.57e-296 810.0 COG2244@1|root,COG2244@2|Bacteria,4NRKF@976|Bacteroidetes,2FWB9@200643|Bacteroidia,22ZWW@171551|Porphyromonadaceae 976|Bacteroidetes S Polysaccharide biosynthesis protein - - - - - - - - - - - - Polysacc_synt,Polysacc_synt_C LIIFOLDO_01827 435591.BDI_3099 2.6e-258 707.0 COG0624@1|root,COG0624@2|Bacteria,4NE2G@976|Bacteroidetes,2FN2Z@200643|Bacteroidia,22X74@171551|Porphyromonadaceae 976|Bacteroidetes E COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related argE - 3.5.1.16 ko:K01438 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028,M00845 R00669,R09107 RC00064,RC00300 ko00000,ko00001,ko00002,ko01000 - - - M20_dimer,Peptidase_M20,Peptidase_M28 LIIFOLDO_01828 435591.BDI_3100 1.22e-222 613.0 COG0196@1|root,COG0196@2|Bacteria,4NEI9@976|Bacteroidetes,2FM7A@200643|Bacteroidia,22WPE@171551|Porphyromonadaceae 976|Bacteroidetes H Belongs to the ribF family ribF - 2.7.1.26,2.7.7.2 ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 M00125 R00161,R00549 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - FAD_syn,Flavokinase LIIFOLDO_01829 435591.BDI_3101 0.0 2382.0 COG0745@1|root,COG2207@1|root,COG3292@1|root,COG5002@1|root,COG0745@2|Bacteria,COG2207@2|Bacteria,COG3292@2|Bacteria,COG5002@2|Bacteria,4P0IA@976|Bacteroidetes,2FWSR@200643|Bacteroidia,22X5X@171551|Porphyromonadaceae 976|Bacteroidetes T Y_Y_Y domain - - - - - - - - - - - - HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y LIIFOLDO_01830 435591.BDI_3102 0.0 1974.0 COG1501@1|root,COG1501@2|Bacteria,4NE1H@976|Bacteroidetes,2FM4Z@200643|Bacteroidia,22W3H@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the glycosyl hydrolase 31 family - GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0010383,GO:0010410,GO:0010411,GO:0016052,GO:0016787,GO:0016798,GO:0043170,GO:0044036,GO:0044042,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0044403,GO:0044419,GO:0051704,GO:0071554,GO:0071704,GO:0085030,GO:1901575,GO:2000895,GO:2000899 3.2.1.177 ko:K01811 - - - - ko00000,ko01000 - GH31 - DUF4968,DUF5110,Gal_mutarotas_2,Glyco_hydro_31,PA14 LIIFOLDO_01831 435591.BDI_3103 0.0 1755.0 COG3250@1|root,COG3250@2|Bacteria,4NEWN@976|Bacteroidetes,2FPM1@200643|Bacteroidia,22W9F@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the glycosyl hydrolase 2 family bga GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0004565,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0010383,GO:0010410,GO:0010411,GO:0015925,GO:0016052,GO:0016787,GO:0016798,GO:0043170,GO:0044036,GO:0044042,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0044403,GO:0044419,GO:0051704,GO:0071554,GO:0071704,GO:0085030,GO:1901575,GO:2000895,GO:2000899 3.2.1.23 ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 - R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 - - - DUF4982,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N LIIFOLDO_01832 435591.BDI_3104 0.0 1460.0 COG1472@1|root,COG1472@2|Bacteria,4NE90@976|Bacteroidetes,2FMCU@200643|Bacteroidia,22WMW@171551|Porphyromonadaceae 976|Bacteroidetes G hydrolase, family 3 bglB_4 GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0008422,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0010383,GO:0010410,GO:0010411,GO:0015926,GO:0016052,GO:0016787,GO:0016798,GO:0043170,GO:0044036,GO:0044042,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0044403,GO:0044419,GO:0051704,GO:0071554,GO:0071704,GO:0085030,GO:1901575,GO:2000895,GO:2000899 3.2.1.21 ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 - R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040 RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248 ko00000,ko00001,ko01000 - GH3 - Fn3-like,Glyco_hydro_3,Glyco_hydro_3_C LIIFOLDO_01833 435591.BDI_3105 1.2e-234 644.0 COG2837@1|root,COG2837@2|Bacteria,4NI0K@976|Bacteroidetes,2FQ2E@200643|Bacteroidia 976|Bacteroidetes P Dyp-type peroxidase family yfeX - - ko:K07223 - - - - ko00000 - - - Dyp_perox LIIFOLDO_01834 435591.BDI_3107 1.3e-210 582.0 2C62U@1|root,2ZVV4@2|Bacteria,4P8GH@976|Bacteroidetes,2FPVS@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01835 435591.BDI_1620 0.0 1636.0 COG3537@1|root,COG3537@2|Bacteria,4NDYB@976|Bacteroidetes,2FMXD@200643|Bacteroidia,22WP0@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 LIIFOLDO_01836 435591.BDI_1619 0.0 1580.0 COG3537@1|root,COG3537@2|Bacteria,4NDYB@976|Bacteroidetes,2FMQ9@200643|Bacteroidia,22WY7@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 LIIFOLDO_01837 435591.BDI_1618 0.0 1544.0 COG3537@1|root,COG3537@2|Bacteria,4NI5B@976|Bacteroidetes,2FMQ3@200643|Bacteroidia,22X79@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 LIIFOLDO_01838 435591.BDI_1617 0.0 1662.0 COG0642@1|root,COG0745@1|root,COG2203@1|root,COG0745@2|Bacteria,COG2203@2|Bacteria,COG2205@2|Bacteria,4NDXU@976|Bacteroidetes 976|Bacteroidetes T Histidine kinase - - - - - - - - - - - - GAF_2,HATPase_c,HisKA,PAS_3,Response_reg LIIFOLDO_01839 435591.BDI_1616 1.91e-151 426.0 COG1102@1|root,COG1102@2|Bacteria,4NN0M@976|Bacteroidetes,2G0H9@200643|Bacteroidia,22XVP@171551|Porphyromonadaceae 976|Bacteroidetes F Cytidylate kinase-like family - - - - - - - - - - - - Cytidylate_kin2 LIIFOLDO_01840 313596.RB2501_00496 6.57e-25 105.0 COG1472@1|root,COG1472@2|Bacteria,4NE90@976|Bacteroidetes,1HWVV@117743|Flavobacteriia 976|Bacteroidetes G hydrolase, family 3 - - 3.2.1.21 ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 - R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040 RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248 ko00000,ko00001,ko01000 - GH3 - Glyco_hydro_3,Glyco_hydro_3_C LIIFOLDO_01841 1408473.JHXO01000006_gene1236 2.32e-34 131.0 COG1472@1|root,COG1472@2|Bacteria,4NE90@976|Bacteroidetes,2FPEP@200643|Bacteroidia 976|Bacteroidetes G Glycosyl hydrolase family 3 C-terminal domain - - 3.2.1.21 ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 - R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040 RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248 ko00000,ko00001,ko01000 - GH3 - Glyco_hydro_3,Glyco_hydro_3_C LIIFOLDO_01842 1408473.JHXO01000006_gene1236 2.41e-76 250.0 COG1472@1|root,COG1472@2|Bacteria,4NE90@976|Bacteroidetes,2FPEP@200643|Bacteroidia 976|Bacteroidetes G Glycosyl hydrolase family 3 C-terminal domain - - 3.2.1.21 ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 - R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040 RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248 ko00000,ko00001,ko01000 - GH3 - Glyco_hydro_3,Glyco_hydro_3_C LIIFOLDO_01843 435591.BDI_1612 4.06e-93 271.0 2BGBS@1|root,32A9E@2|Bacteria,4NS68@976|Bacteroidetes,2FTN7@200643|Bacteroidia,231PZ@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG32529 non supervised orthologous group - - - - - - - - - - - - - LIIFOLDO_01844 435591.BDI_1611 0.0 918.0 COG3969@1|root,COG3969@2|Bacteria,4NJR7@976|Bacteroidetes,2FMUJ@200643|Bacteroidia,22WJU@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF3440) - - - - - - - - - - - - DUF3440,PAPS_reduct LIIFOLDO_01845 435591.BDI_1610 6.68e-125 355.0 COG1475@1|root,COG1475@2|Bacteria,4NHNB@976|Bacteroidetes,2FNE6@200643|Bacteroidia,22W0I@171551|Porphyromonadaceae 976|Bacteroidetes K ParB-like nuclease domain ibrB - - - - - - - - - - - ParBc LIIFOLDO_01846 435591.BDI_1609 3.54e-181 504.0 COG1635@1|root,COG1635@2|Bacteria,4NJ8N@976|Bacteroidetes,2FMZW@200643|Bacteroidia,22Z30@171551|Porphyromonadaceae 976|Bacteroidetes H Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur thi4 - - ko:K03146 ko00730,ko01100,map00730,map01100 - R10685 RC00033,RC03253,RC03254 ko00000,ko00001 - - - Thi4 LIIFOLDO_01847 435591.BDI_1608 2.23e-97 283.0 2C5N5@1|root,32XD8@2|Bacteria,4PQ0Y@976|Bacteroidetes,2G1BD@200643|Bacteroidia,230ZX@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01848 435591.BDI_1607 3.09e-97 282.0 2BXNV@1|root,2ZTIF@2|Bacteria,4P8CS@976|Bacteroidetes,2G1RS@200643|Bacteroidia,2314W@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG32090 non supervised orthologous group - - - - - - - - - - - - - LIIFOLDO_01849 435591.BDI_1606 1.99e-265 729.0 COG0845@1|root,COG0845@2|Bacteria,4NF6Y@976|Bacteroidetes,2FMZD@200643|Bacteroidia,22X56@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - - - - - - - - - - HlyD_3,HlyD_D23 LIIFOLDO_01850 435591.BDI_1605 0.0 1914.0 COG3696@1|root,COG3696@2|Bacteria,4P36A@976|Bacteroidetes,2FMH3@200643|Bacteroidia,22VYK@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family czcA - - ko:K07787 ko02020,map02020 - - - ko00000,ko00001,ko02000 2.A.6.1.4 - - ACR_tran LIIFOLDO_01851 435591.BDI_1604 4.76e-269 738.0 COG1538@1|root,COG1538@2|Bacteria,4NIE8@976|Bacteroidetes,2FNS5@200643|Bacteroidia,22X81@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - - - - - - - - - - OEP LIIFOLDO_01852 435591.BDI_1603 6.78e-220 607.0 COG2070@1|root,COG2070@2|Bacteria,4NF8Z@976|Bacteroidetes,2FMYA@200643|Bacteroidia,22X2W@171551|Porphyromonadaceae 976|Bacteroidetes S 2-nitropropane dioxygenase fabK - 1.3.1.9 ko:K02371 ko00061,ko01100,ko01212,map00061,map01100,map01212 M00083 R04429,R04724,R04955,R04958,R04961,R04966,R04969,R07765 RC00052,RC00076 ko00000,ko00001,ko00002,ko01000,ko01004 - - - NMO LIIFOLDO_01854 435591.BDI_1602 0.0 1400.0 COG0339@1|root,COG0339@2|Bacteria,4NFYA@976|Bacteroidetes,2FNQV@200643|Bacteroidia,22WQA@171551|Porphyromonadaceae 976|Bacteroidetes E Peptidase family M3 - - 3.4.15.5 ko:K01284 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M3 LIIFOLDO_01855 435591.BDI_1601 0.0 1443.0 COG0339@1|root,COG0339@2|Bacteria,4NFYA@976|Bacteroidetes,2FNQV@200643|Bacteroidia,22WQA@171551|Porphyromonadaceae 976|Bacteroidetes E Peptidase family M3 - - 3.4.15.5 ko:K01284 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M3 LIIFOLDO_01856 435591.BDI_1600 1.49e-225 621.0 COG4974@1|root,COG4974@2|Bacteria,4NZW9@976|Bacteroidetes,2FSE0@200643|Bacteroidia 976|Bacteroidetes L Phage integrase, N-terminal SAM-like domain - - - - - - - - - - - - Phage_int_SAM_5,Phage_integrase LIIFOLDO_01857 926559.JoomaDRAFT_2503 5.82e-95 292.0 COG0438@1|root,COG0438@2|Bacteria 2|Bacteria M transferase activity, transferring glycosyl groups - - - - - - - - - - - - Glyco_trans_1_4,Glyco_transf_4,Glycos_transf_1,Glycos_transf_2 LIIFOLDO_01858 435591.BDI_1580 0.0 1349.0 COG0673@1|root,COG1063@1|root,COG0673@2|Bacteria,COG1063@2|Bacteria,4NFEW@976|Bacteroidetes,2FNZS@200643|Bacteroidia 976|Bacteroidetes E Oxidoreductase NAD-binding domain protein - - - ko:K02030,ko:K03810 - M00236 - - ko00000,ko00002,ko02000 3.A.1.3 - - ADH_zinc_N,GFO_IDH_MocA LIIFOLDO_01859 435591.BDI_1579 0.0 1035.0 COG5360@1|root,COG5360@2|Bacteria,4NHMA@976|Bacteroidetes,2G2Q8@200643|Bacteroidia,2313F@171551|Porphyromonadaceae 976|Bacteroidetes S Heparinase II/III N-terminus - - - - - - - - - - - - Hepar_II_III,Hepar_II_III_N LIIFOLDO_01860 435591.BDI_1578 7.41e-297 809.0 COG0677@1|root,COG0677@2|Bacteria,4NDTW@976|Bacteroidetes,2FMSD@200643|Bacteroidia,22WMZ@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the UDP-glucose GDP-mannose dehydrogenase family - - 1.1.1.336 ko:K02472 ko00520,ko05111,map00520,map05111 - R03317 RC00291 ko00000,ko00001,ko01000 - - - UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N LIIFOLDO_01861 435591.BDI_1577 1.55e-278 761.0 COG0381@1|root,COG0381@2|Bacteria,4NGBD@976|Bacteroidetes,2FM5D@200643|Bacteroidia,22W64@171551|Porphyromonadaceae 976|Bacteroidetes G UDP-N-acetylglucosamine 2-epimerase - - 5.1.3.14 ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 M00362 R00420 RC00290 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Epimerase_2 LIIFOLDO_01862 435591.BDI_1576 2.19e-291 795.0 COG0438@1|root,COG0438@2|Bacteria,4NGU7@976|Bacteroidetes 976|Bacteroidetes M glycosyl transferase group 1 - - - - - - - - - - - - Glyco_trans_1_4,Glyco_trans_4_4,Glycos_transf_1 LIIFOLDO_01863 435591.BDI_1575 1.91e-107 309.0 COG0105@1|root,COG0105@2|Bacteria,4NM5B@976|Bacteroidetes,2FNRV@200643|Bacteroidia,22XWY@171551|Porphyromonadaceae 976|Bacteroidetes F Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate ndk - 2.7.4.6 ko:K00940 ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016 M00049,M00050,M00052,M00053 R00124,R00139,R00156,R00330,R00570,R00722,R01137,R01857,R02093,R02326,R02331,R03530,R11894,R11895 RC00002 ko00000,ko00001,ko00002,ko01000,ko04131 - - - NDK LIIFOLDO_01864 435591.BDI_1574 1.15e-140 398.0 COG1961@1|root,COG1961@2|Bacteria,4NJM8@976|Bacteroidetes,2FMQS@200643|Bacteroidia,22XTB@171551|Porphyromonadaceae 976|Bacteroidetes L Resolvase, N terminal domain - - - - - - - - - - - - HTH_7,Resolvase LIIFOLDO_01865 435591.BDI_1573 0.0 1939.0 COG2605@1|root,COG2605@2|Bacteria,4NHF2@976|Bacteroidetes,2FMWG@200643|Bacteroidia,22VW1@171551|Porphyromonadaceae 976|Bacteroidetes S L-fucokinase fkp - - - - - - - - - - - Fucokinase,GHMP_kinases_C,GHMP_kinases_N LIIFOLDO_01866 435591.BDI_1572 0.0 1714.0 COG4775@1|root,COG4775@2|Bacteria,4NDYT@976|Bacteroidetes,2FMTK@200643|Bacteroidia,22WRF@171551|Porphyromonadaceae 976|Bacteroidetes M CarboxypepD_reg-like domain - - - - - - - - - - - - CarbopepD_reg_2 LIIFOLDO_01867 435591.BDI_1571 1.13e-255 701.0 COG0389@1|root,COG0389@2|Bacteria,4NF1Y@976|Bacteroidetes,2FNAN@200643|Bacteroidia,22VUU@171551|Porphyromonadaceae 976|Bacteroidetes L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII dinB - 2.7.7.7 ko:K02346 - - - - ko00000,ko01000,ko03400 - - - IMS,IMS_C,IMS_HHH LIIFOLDO_01868 435591.BDI_1570 6.57e-176 491.0 COG0652@1|root,COG0652@2|Bacteria,4NGT6@976|Bacteroidetes,2FMZ6@200643|Bacteroidia,22XHA@171551|Porphyromonadaceae 976|Bacteroidetes O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides ppiA - 5.2.1.8 ko:K03768 - - - - ko00000,ko01000,ko03110 - - - Pro_isomerase LIIFOLDO_01869 435591.BDI_1569 1.02e-159 447.0 COG0652@1|root,COG0652@2|Bacteria,4NMKP@976|Bacteroidetes,2G31W@200643|Bacteroidia,22XR7@171551|Porphyromonadaceae 976|Bacteroidetes M PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides ppiA - 5.2.1.8 ko:K01802,ko:K03768 - - - - ko00000,ko01000,ko03110 - - - Pro_isomerase LIIFOLDO_01871 435591.BDI_1568 0.0 872.0 COG1917@1|root,COG2220@1|root,COG1917@2|Bacteria,COG2220@2|Bacteria,4P6GJ@976|Bacteroidetes,2FY09@200643|Bacteroidia 976|Bacteroidetes S ARD/ARD' family - - - - - - - - - - - - Cupin_2 LIIFOLDO_01872 435591.BDI_1567 6.43e-284 775.0 COG0667@1|root,COG0667@2|Bacteria,4NEB0@976|Bacteroidetes,2FMYE@200643|Bacteroidia,22XRR@171551|Porphyromonadaceae 976|Bacteroidetes C related to aryl-alcohol - - - - - - - - - - - - Aldo_ket_red,TAT_signal LIIFOLDO_01873 435591.BDI_1566 2.92e-259 709.0 COG1075@1|root,COG1075@2|Bacteria,4NFSV@976|Bacteroidetes,2FNWB@200643|Bacteroidia,22XH0@171551|Porphyromonadaceae 976|Bacteroidetes S Alpha/beta hydrolase family - - - - - - - - - - - - Abhydrolase_6 LIIFOLDO_01874 435591.BDI_1565 1.05e-220 608.0 COG1209@1|root,COG1209@2|Bacteria,4NF32@976|Bacteroidetes,2FP9F@200643|Bacteroidia,22VUQ@171551|Porphyromonadaceae 976|Bacteroidetes M nucleotidyltransferase - - - - - - - - - - - - NTP_transf_3,NTP_transferase LIIFOLDO_01875 435591.BDI_1564 0.0 1064.0 COG3534@1|root,COG3534@2|Bacteria,4NECK@976|Bacteroidetes,2FNNB@200643|Bacteroidia,22WR1@171551|Porphyromonadaceae 976|Bacteroidetes G Alpha-L-arabinofuranosidase C-terminus abf2 - 3.2.1.55 ko:K01209 ko00520,map00520 - R01762 - ko00000,ko00001,ko01000 - GH51 - Alpha-L-AF_C LIIFOLDO_01876 435591.BDI_1563 0.0 1375.0 COG3590@1|root,COG3590@2|Bacteria,4NEYB@976|Bacteroidetes,2FP7Y@200643|Bacteroidia,22WXJ@171551|Porphyromonadaceae 976|Bacteroidetes O Peptidase family M13 pepO - 3.4.24.71 ko:K01415,ko:K07386 - - - - ko00000,ko01000,ko01002,ko04147 - - - Peptidase_M13,Peptidase_M13_N LIIFOLDO_01877 435591.BDI_1562 3.69e-203 562.0 COG2169@1|root,COG2169@2|Bacteria,4P21T@976|Bacteroidetes,2FR6F@200643|Bacteroidia,231H2@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix, arabinose operon control protein - - - - - - - - - - - - HTH_18 LIIFOLDO_01878 435591.BDI_1561 1.82e-45 146.0 2E998@1|root,333HI@2|Bacteria,4NX30@976|Bacteroidetes,2FUKA@200643|Bacteroidia,23161@171551|Porphyromonadaceae 976|Bacteroidetes S Winged helix-turn-helix domain (DUF2582) - - - - - - - - - - - - DUF2582 LIIFOLDO_01879 435591.BDI_2549 0.0 1618.0 COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,2FW53@200643|Bacteroidia,231P0@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_01880 435591.BDI_2548 0.0 1269.0 COG3637@1|root,COG3637@2|Bacteria,4NE4Y@976|Bacteroidetes,2G0HK@200643|Bacteroidia,2324C@171551|Porphyromonadaceae 976|Bacteroidetes M SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_01881 435591.BDI_2547 2.62e-213 590.0 COG0530@1|root,COG0530@2|Bacteria,4NFBC@976|Bacteroidetes,2FNX9@200643|Bacteroidia,22WRW@171551|Porphyromonadaceae 976|Bacteroidetes P K -dependent Na Ca exchanger yrbG - - ko:K07301 - - - - ko00000,ko02000 2.A.19.5 - - Na_Ca_ex LIIFOLDO_01882 435591.BDI_2546 8.56e-90 263.0 COG0629@1|root,COG0629@2|Bacteria,4NT9M@976|Bacteroidetes,2FS0P@200643|Bacteroidia,22YIZ@171551|Porphyromonadaceae 976|Bacteroidetes L Domain of unknown function (DUF3127) - - - - - - - - - - - - DUF3127 LIIFOLDO_01883 435591.BDI_2545 1.23e-75 226.0 COG0789@1|root,COG0789@2|Bacteria,4NSBD@976|Bacteroidetes,2FTI6@200643|Bacteroidia,22YFS@171551|Porphyromonadaceae 976|Bacteroidetes K Transcriptional regulator ycgE - - - - - - - - - - - MerR_1 LIIFOLDO_01884 435591.BDI_2544 1.25e-237 653.0 COG0739@1|root,COG0739@2|Bacteria,4NGHH@976|Bacteroidetes,2FME3@200643|Bacteroidia,22X07@171551|Porphyromonadaceae 976|Bacteroidetes M Peptidase, M23 - - - - - - - - - - - - Peptidase_M23 LIIFOLDO_01885 435591.BDI_2543 0.0 1716.0 COG0013@1|root,COG0013@2|Bacteria,4NFHW@976|Bacteroidetes,2FN1R@200643|Bacteroidia,22XC2@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain alaS GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 ko:K01872 ko00970,map00970 M00359,M00360 R03038 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - DHHA1,tRNA-synt_2c,tRNA_SAD LIIFOLDO_01886 435591.BDI_2542 1.19e-255 701.0 COG0337@1|root,COG0337@2|Bacteria,4NGSS@976|Bacteroidetes,2FNVM@200643|Bacteroidia,22VVS@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) aroB - 4.2.3.4 ko:K01735 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R03083 RC00847 ko00000,ko00001,ko00002,ko01000 - - - DHQ_synthase LIIFOLDO_01888 435591.BDI_2653 4.37e-09 69.7 2DUTV@1|root,33S7W@2|Bacteria,4P1VI@976|Bacteroidetes,2FWJJ@200643|Bacteroidia,22ZT0@171551|Porphyromonadaceae 435591.BDI_2653|- - - - - - - - - - - - - - - - LIIFOLDO_01890 435591.BDI_2529 1.6e-309 843.0 COG1373@1|root,COG1373@2|Bacteria,4NED3@976|Bacteroidetes,2G31T@200643|Bacteroidia,22XCX@171551|Porphyromonadaceae 976|Bacteroidetes S AAA domain - - - ko:K07133 - - - - ko00000 - - - AAA_14,DUF4143 LIIFOLDO_01891 435591.BDI_2528 0.0 971.0 COG1409@1|root,COG1409@2|Bacteria,4NF9K@976|Bacteroidetes,2FPK8@200643|Bacteroidia,22XJP@171551|Porphyromonadaceae 976|Bacteroidetes S C terminal of Calcineurin-like phosphoesterase - - - - - - - - - - - - Metallophos,MetallophosC,MetallophosN LIIFOLDO_01892 435591.BDI_2527 0.0 2094.0 COG1629@1|root,COG1629@2|Bacteria,4PMFP@976|Bacteroidetes,2FQ4Q@200643|Bacteroidia,22WHZ@171551|Porphyromonadaceae 976|Bacteroidetes P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarboxypepD_reg LIIFOLDO_01893 435591.BDI_2526 5.91e-151 424.0 2BRAW@1|root,32K9E@2|Bacteria,4NQS0@976|Bacteroidetes,2FPJK@200643|Bacteroidia,22YJB@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01894 435591.BDI_2525 0.0 2464.0 COG0046@1|root,COG0047@1|root,COG0046@2|Bacteria,COG0047@2|Bacteria,4NETY@976|Bacteroidetes,2FM2Z@200643|Bacteroidia,22W21@171551|Porphyromonadaceae 976|Bacteroidetes F Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate purL - 6.3.5.3 ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04463 RC00010,RC01160 ko00000,ko00001,ko00002,ko01000 - - - AIRS_C,GATase_5 LIIFOLDO_01895 435591.BDI_2524 0.0 1067.0 COG2913@1|root,COG2913@2|Bacteria,4PMKA@976|Bacteroidetes,2G0KG@200643|Bacteroidia,22Z5Y@171551|Porphyromonadaceae 976|Bacteroidetes J SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_01896 763034.HMPREF9446_00964 1e-112 337.0 COG1835@1|root,COG1835@2|Bacteria,4NZUD@976|Bacteroidetes,2G1Z4@200643|Bacteroidia,4AT3Z@815|Bacteroidaceae 976|Bacteroidetes I Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - Acyl_transf_3 LIIFOLDO_01897 1235803.C825_04369 7.87e-130 374.0 COG0500@1|root,COG2226@2|Bacteria,4NIQW@976|Bacteroidetes,2FMDT@200643|Bacteroidia 976|Bacteroidetes Q Methionine biosynthesis protein MetW - - - - - - - - - - - - Methyltransf_11 LIIFOLDO_01898 483216.BACEGG_01795 1.68e-203 579.0 COG2244@1|root,COG2244@2|Bacteria,4NFKD@976|Bacteroidetes,2FNDA@200643|Bacteroidia,4AKA1@815|Bacteroidaceae 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - Polysacc_synt_3,Polysacc_synt_C LIIFOLDO_01899 999419.HMPREF1077_02806 4.74e-281 785.0 COG0367@1|root,COG0367@2|Bacteria,4P0XF@976|Bacteroidetes,2FQ9W@200643|Bacteroidia 976|Bacteroidetes E Psort location Cytoplasmic, score - - - - - - - - - - - - Asn_synthase LIIFOLDO_01900 999419.HMPREF1077_02805 6.75e-180 512.0 COG1215@1|root,COG1215@2|Bacteria,4NEM5@976|Bacteroidetes,2FQ1S@200643|Bacteroidia 976|Bacteroidetes M Psort location CytoplasmicMembrane, score - - - - - - - - - - - - Glyco_tranf_2_3 LIIFOLDO_01901 435591.BDI_1297 2.9e-273 749.0 COG1215@1|root,COG1215@2|Bacteria,4NEG0@976|Bacteroidetes,2FM0D@200643|Bacteroidia,22WVN@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyl transferase family 21 - - - - - - - - - - - - Glyco_tranf_2_3,Glycos_transf_2 LIIFOLDO_01902 435591.BDI_1298 2.52e-263 722.0 COG0642@1|root,COG3437@1|root,COG0642@2|Bacteria,COG3437@2|Bacteria,4PMUU@976|Bacteroidetes,2G0H5@200643|Bacteroidia,22WUE@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - 2.7.13.3 ko:K11527 - - - - ko00000,ko01000,ko01001,ko02022 - - - HATPase_c,HisKA,Response_reg LIIFOLDO_01904 435591.BDI_1299 4.11e-77 229.0 COG0720@1|root,COG0720@2|Bacteria,4NQYM@976|Bacteroidetes,2FSMG@200643|Bacteroidia,22YHS@171551|Porphyromonadaceae 976|Bacteroidetes H 6-pyruvoyl tetrahydropterin synthase queD - 4.1.2.50,4.2.3.12 ko:K01737 ko00790,ko01100,map00790,map01100 M00842,M00843 R04286,R09959 RC01117,RC02846,RC02847 ko00000,ko00001,ko00002,ko01000,ko03016 - - - PTPS LIIFOLDO_01905 435591.BDI_1300 1.1e-131 373.0 COG0602@1|root,COG0602@2|Bacteria,4NESC@976|Bacteroidetes,2FPNA@200643|Bacteroidia,22Y8Q@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds queE - 4.3.99.3 ko:K10026 ko00790,ko01100,map00790,map01100 - R10002 RC02989 ko00000,ko00001,ko01000,ko03016 - - - Fer4_12,Fer4_14,Radical_SAM LIIFOLDO_01906 435591.BDI_1301 0.0 909.0 COG0044@1|root,COG0044@2|Bacteria,4NE3T@976|Bacteroidetes,2FN4X@200643|Bacteroidia,22WH4@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides pyrC - 3.5.2.3 ko:K01465 ko00240,ko01100,map00240,map01100 M00051 R01993 RC00632 ko00000,ko00001,ko00002,ko01000 - - - Amidohydro_1 LIIFOLDO_01907 435591.BDI_1302 6.15e-183 508.0 COG1216@1|root,COG1216@2|Bacteria,4NEHI@976|Bacteroidetes,2FM3A@200643|Bacteroidia,22WKN@171551|Porphyromonadaceae 976|Bacteroidetes S Dolichyl-phosphate beta-D-mannosyltransferase dpm1 - 2.4.1.83 ko:K00721 ko00510,ko01100,map00510,map01100 - R01009 RC00005 ko00000,ko00001,ko01000,ko01003 - GT2 - Glycos_transf_2 LIIFOLDO_01908 435591.BDI_1303 9.66e-221 608.0 COG0583@1|root,COG0583@2|Bacteria,4NGZ5@976|Bacteroidetes,2FNH6@200643|Bacteroidia,22X0D@171551|Porphyromonadaceae 976|Bacteroidetes K Transcriptional regulator oxyR - - ko:K04761 ko02026,map02026 - - - ko00000,ko00001,ko03000 - - - HTH_1,LysR_substrate LIIFOLDO_01909 435591.BDI_1304 1.71e-303 827.0 COG1470@1|root,COG1470@2|Bacteria,4NGFF@976|Bacteroidetes,2FN5A@200643|Bacteroidia,22X2I@171551|Porphyromonadaceae 976|Bacteroidetes S CarboxypepD_reg-like domain - - - - - - - - - - - - CarbopepD_reg_2 LIIFOLDO_01910 435591.BDI_1305 3.14e-121 346.0 COG1595@1|root,COG1595@2|Bacteria,4NNBY@976|Bacteroidetes,2FQ9M@200643|Bacteroidia,22YPF@171551|Porphyromonadaceae 976|Bacteroidetes K RNA polymerase sigma-70 factor, Bacteroides expansion family 1 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 LIIFOLDO_01911 435591.BDI_1306 9.8e-197 546.0 COG3712@1|root,COG3712@2|Bacteria,4NMYI@976|Bacteroidetes,2FRE6@200643|Bacteroidia,22Y3D@171551|Porphyromonadaceae 976|Bacteroidetes PT FecR protein - - - - - - - - - - - - FecR LIIFOLDO_01912 435591.BDI_1307 0.0 1021.0 COG1470@1|root,COG1470@2|Bacteria,4NNH8@976|Bacteroidetes,2FP8N@200643|Bacteroidia,22XU4@171551|Porphyromonadaceae 976|Bacteroidetes S CarboxypepD_reg-like domain - - - - - - - - - - - - CarbopepD_reg_2 LIIFOLDO_01913 435591.BDI_1308 4.83e-314 855.0 COG0677@1|root,COG0677@2|Bacteria,4NDTW@976|Bacteroidetes,2FMXE@200643|Bacteroidia,22W6E@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the UDP-glucose GDP-mannose dehydrogenase family - - 1.1.1.136 ko:K02474,ko:K13015 ko00520,map00520 - R00421,R06894 RC00291 ko00000,ko00001,ko01000,ko01005 - - - UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N LIIFOLDO_01914 435591.BDI_1309 9.28e-308 839.0 COG1538@1|root,COG1538@2|Bacteria,4NKK6@976|Bacteroidetes,2FP9K@200643|Bacteroidia,22WHA@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - - - - - - - - - - OEP LIIFOLDO_01915 435591.BDI_1310 0.0 1941.0 COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,2FMG1@200643|Bacteroidia,22W2A@171551|Porphyromonadaceae 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - - - - - - - - - - ACR_tran LIIFOLDO_01916 435591.BDI_1311 2.04e-230 637.0 COG0845@1|root,COG0845@2|Bacteria,4NIZF@976|Bacteroidetes,2FN5T@200643|Bacteroidia,22Y8A@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - - - - - - - - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 LIIFOLDO_01917 435591.BDI_1312 4.38e-243 667.0 COG1864@1|root,COG1864@2|Bacteria,4NFYJ@976|Bacteroidetes,2FNBK@200643|Bacteroidia,22XS4@171551|Porphyromonadaceae 976|Bacteroidetes F DNA/RNA non-specific endonuclease nucA_1 - - ko:K01173 ko04210,map04210 - - - ko00000,ko00001,ko03029 - - - Endonuclease_NS LIIFOLDO_01918 435591.BDI_1313 5.91e-261 713.0 COG1533@1|root,COG1533@2|Bacteria,4NIE5@976|Bacteroidetes,2FNMX@200643|Bacteroidia 976|Bacteroidetes L Domain of unknown function (DUF1848) - - - - - - - - - - - - DUF1848 LIIFOLDO_01919 435591.BDI_1314 5.26e-133 376.0 COG0655@1|root,COG0655@2|Bacteria,4NHHY@976|Bacteroidetes,2FQJ4@200643|Bacteroidia,22XTE@171551|Porphyromonadaceae 976|Bacteroidetes S NADPH-dependent FMN reductase ywqN - - - - - - - - - - - FMN_red LIIFOLDO_01920 435591.BDI_3396 2.47e-136 385.0 COG0450@1|root,COG0450@2|Bacteria,4NEDT@976|Bacteroidetes,2FMG5@200643|Bacteroidia,22W4F@171551|Porphyromonadaceae 976|Bacteroidetes O alkyl hydroperoxide reductase ahpC - 1.11.1.15 ko:K03386 ko04214,map04214 - - - ko00000,ko00001,ko01000,ko04147 - - - 1-cysPrx_C,AhpC-TSA LIIFOLDO_01921 435591.BDI_3397 0.0 1005.0 COG3634@1|root,COG3634@2|Bacteria,4NGJY@976|Bacteroidetes,2FM1S@200643|Bacteroidia,22WAT@171551|Porphyromonadaceae 976|Bacteroidetes C NADH dehydrogenase ahpF - - ko:K03387 - - - - ko00000,ko01000 - - - Pyr_redox_2,Thioredoxin_3 LIIFOLDO_01922 435591.BDI_3398 4.23e-57 178.0 2EP0A@1|root,33GM5@2|Bacteria,4NYGM@976|Bacteroidetes,2FUEY@200643|Bacteroidia,22YWI@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01923 435591.BDI_3399 0.0 1538.0 COG1629@1|root,COG4771@2|Bacteria,4NF05@976|Bacteroidetes,2FMJS@200643|Bacteroidia,22X9C@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent receptor - - - ko:K16089 - - - - ko00000,ko02000 1.B.14.1,1.B.14.10 - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_01924 435591.BDI_3400 6.77e-248 679.0 COG1082@1|root,COG1082@2|Bacteria,4NJ3Z@976|Bacteroidetes,2FNWR@200643|Bacteroidia,22XN3@171551|Porphyromonadaceae 976|Bacteroidetes G Xylose isomerase-like TIM barrel - - - - - - - - - - - - AP_endonuc_2 LIIFOLDO_01925 435591.BDI_3401 0.0 1583.0 COG4206@1|root,COG4206@2|Bacteria,4NE1W@976|Bacteroidetes,2FME0@200643|Bacteroidia,22XAS@171551|Porphyromonadaceae 976|Bacteroidetes H TonB-dependent Receptor Plug Domain - - - - - - - - - - - - CarbopepD_reg_2,OMP_b-brl_3,Plug,TonB_dep_Rec LIIFOLDO_01926 435591.BDI_3402 0.0 925.0 COG4166@1|root,COG4166@2|Bacteria,4NJ4K@976|Bacteroidetes,2G060@200643|Bacteroidia,22ZN6@171551|Porphyromonadaceae 976|Bacteroidetes E Domain of unknown function (DUF4374) - - - - - - - - - - - - DUF4374 LIIFOLDO_01927 435591.BDI_3403 2.16e-201 557.0 COG2819@1|root,COG2819@2|Bacteria,4NN8M@976|Bacteroidetes,2FPCR@200643|Bacteroidia,2316N@171551|Porphyromonadaceae 976|Bacteroidetes S Putative esterase - - - ko:K07017 - - - - ko00000 - - - Esterase LIIFOLDO_01928 435591.BDI_3404 4.07e-270 738.0 COG3182@1|root,COG3182@2|Bacteria,4NEXX@976|Bacteroidetes,2FPEY@200643|Bacteroidia,22WIV@171551|Porphyromonadaceae 976|Bacteroidetes S PepSY-associated TM region piuB - - - - - - - - - - - PepSY,PepSY_TM LIIFOLDO_01929 1122931.AUAE01000012_gene2353 7.87e-92 271.0 COG0716@1|root,COG0716@2|Bacteria,4NQ9B@976|Bacteroidetes,2FTDN@200643|Bacteroidia,22Y61@171551|Porphyromonadaceae 976|Bacteroidetes C Low-potential electron donor to a number of redox enzymes - - - ko:K03839 - - - - ko00000 - - - Flavodoxin_1 LIIFOLDO_01930 1158294.JOMI01000003_gene2718 2.5e-52 187.0 COG3292@1|root,COG3292@2|Bacteria,4NF78@976|Bacteroidetes,2FNQA@200643|Bacteroidia 976|Bacteroidetes T Domain of unknown function (DUF5074) - - - - - - - - - - - - DUF5074,PKD_3 LIIFOLDO_01931 1517682.HW49_04560 2.48e-98 334.0 COG3292@1|root,COG3292@2|Bacteria,4NF78@976|Bacteroidetes,2FQUG@200643|Bacteroidia,2300I@171551|Porphyromonadaceae 976|Bacteroidetes T Domain of unknown function (DUF5074) - - - - - - - - - - - - DUF5074 LIIFOLDO_01932 1236514.BAKL01000033_gene2800 2.14e-119 354.0 COG0613@1|root,COG0613@2|Bacteria,4NHZ5@976|Bacteroidetes,2FQW5@200643|Bacteroidia,4AN9D@815|Bacteroidaceae 976|Bacteroidetes S Domain of unknown function - - 3.1.3.97 ko:K07053 - - R00188,R11188 RC00078 ko00000,ko01000 - - - DUF5001,PHP LIIFOLDO_01933 1158294.JOMI01000003_gene2718 5.08e-50 180.0 COG3292@1|root,COG3292@2|Bacteria,4NF78@976|Bacteroidetes,2FNQA@200643|Bacteroidia 976|Bacteroidetes T Domain of unknown function (DUF5074) - - - - - - - - - - - - DUF5074,PKD_3 LIIFOLDO_01934 435591.BDI_2021 6.57e-301 822.0 COG0527@1|root,COG0527@2|Bacteria,4NFWR@976|Bacteroidetes,2FMTV@200643|Bacteroidia,22X04@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the aspartokinase family lysC - 2.7.2.4 ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00017,M00018,M00033,M00525,M00526,M00527 R00480 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 - - - AA_kinase LIIFOLDO_01935 435591.BDI_2022 7.47e-280 764.0 COG0019@1|root,COG0019@2|Bacteria,4NE7X@976|Bacteroidetes,2FMGB@200643|Bacteroidia,22W16@171551|Porphyromonadaceae 976|Bacteroidetes E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine lysA - 4.1.1.20 ko:K01586 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R00451 RC00299 ko00000,ko00001,ko00002,ko01000 - - - Orn_Arg_deC_N,Orn_DAP_Arg_deC LIIFOLDO_01936 435591.BDI_2023 1.05e-273 749.0 COG1215@1|root,COG1215@2|Bacteria,4NESG@976|Bacteroidetes,2FN9E@200643|Bacteroidia,22YIF@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyltransferase family 2 - - - - - - - - - - - - Glyco_tranf_2_3,Glycos_transf_2 LIIFOLDO_01937 435591.BDI_2024 7.85e-122 347.0 COG3727@1|root,COG3727@2|Bacteria,4NQEH@976|Bacteroidetes,2FT9A@200643|Bacteroidia,22YM6@171551|Porphyromonadaceae 976|Bacteroidetes L May nick specific sequences that contain T G mispairs resulting from m5C-deamination vsr - - ko:K07458 - - - - ko00000,ko01000,ko03400 - - - DUF559,Vsr LIIFOLDO_01938 435591.BDI_2025 2.02e-287 786.0 COG4591@1|root,COG4591@2|Bacteria,4NFWZ@976|Bacteroidetes,2FMHC@200643|Bacteroidia,22WJ1@171551|Porphyromonadaceae 976|Bacteroidetes M ABC transporter permease lolE_1 - - ko:K09808 ko02010,map02010 M00255 - - ko00000,ko00001,ko00002,ko02000 3.A.1.125 - - FtsX,MacB_PCD LIIFOLDO_01939 435591.BDI_2026 6.8e-292 796.0 COG0436@1|root,COG0436@2|Bacteria,4NG6G@976|Bacteroidetes,2FN1B@200643|Bacteroidia,22X7G@171551|Porphyromonadaceae 976|Bacteroidetes E Aspartate aminotransferase aspC - 2.6.1.1,2.6.1.2,2.6.1.66 ko:K00812,ko:K14260 ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 - R00258,R00355,R00694,R00734,R00896,R01215,R02433,R02619,R05052 RC00006,RC00008,RC00036 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 LIIFOLDO_01940 435591.BDI_2027 0.0 896.0 COG0491@1|root,COG2333@1|root,COG0491@2|Bacteria,COG2333@2|Bacteria,4NH12@976|Bacteroidetes,2FS0X@200643|Bacteroidia 976|Bacteroidetes S Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - - - - - - - - - - Lactamase_B LIIFOLDO_01941 435591.BDI_2028 3.07e-208 576.0 COG1284@1|root,COG1284@2|Bacteria,4NG9F@976|Bacteroidetes,2FS6Q@200643|Bacteroidia,22XWC@171551|Porphyromonadaceae 976|Bacteroidetes S Uncharacterised 5xTM membrane BCR, YitT family COG1284 - - - - - - - - - - - - DUF2179,YitT_membrane LIIFOLDO_01942 435591.BDI_2029 8.64e-84 248.0 2E81Z@1|root,332G1@2|Bacteria,4NX31@976|Bacteroidetes,2FSJB@200643|Bacteroidia,22YPD@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG30654 non supervised orthologous group - - - - - - - - - - - - - LIIFOLDO_01943 435591.BDI_2029 1.41e-20 87.8 2E81Z@1|root,332G1@2|Bacteria,4NX31@976|Bacteroidetes,2FSJB@200643|Bacteroidia,22YPD@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG30654 non supervised orthologous group - - - - - - - - - - - - - LIIFOLDO_01945 435591.BDI_2031 4.32e-78 233.0 2E81Z@1|root,332G1@2|Bacteria,4NX31@976|Bacteroidetes,2FSJB@200643|Bacteroidia,22YPD@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG30654 non supervised orthologous group - - - - - - - - - - - - - LIIFOLDO_01946 435591.BDI_2032 9.03e-277 757.0 COG0477@1|root,COG2814@2|Bacteria,4NE7F@976|Bacteroidetes,2FQAA@200643|Bacteroidia,22VYY@171551|Porphyromonadaceae 976|Bacteroidetes EGP Major Facilitator Superfamily - - - - - - - - - - - - MFS_1,MFS_1_like,Sugar_tr LIIFOLDO_01947 435591.BDI_2033 0.0 1168.0 COG0488@1|root,COG0488@2|Bacteria,4NES5@976|Bacteroidetes,2FMX8@200643|Bacteroidia,22W1Q@171551|Porphyromonadaceae 976|Bacteroidetes S ABC transporter yfmR - - ko:K15738 - - - - ko00000,ko02000 3.A.1.120.6 - - ABC_tran,ABC_tran_CTD,ABC_tran_Xtn LIIFOLDO_01948 435591.BDI_2034 2.24e-166 464.0 COG0692@1|root,COG0692@2|Bacteria,4NE2B@976|Bacteroidetes,2FM57@200643|Bacteroidia,22WGA@171551|Porphyromonadaceae 976|Bacteroidetes L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine ung - 3.2.2.27 ko:K03648 ko03410,ko05340,map03410,map05340 - - - ko00000,ko00001,ko01000,ko03400 - - - UDG LIIFOLDO_01949 435591.BDI_2035 6.14e-172 479.0 COG2043@1|root,COG2043@2|Bacteria,4NJGE@976|Bacteroidetes,2FNKS@200643|Bacteroidia,230PK@171551|Porphyromonadaceae 976|Bacteroidetes S Uncharacterised ArCR, COG2043 - - - - - - - - - - - - Acetyltransf_3,DUF169,tRNA_SAD LIIFOLDO_01950 435591.BDI_2036 7.63e-72 215.0 COG3695@1|root,COG3695@2|Bacteria,4NQ34@976|Bacteroidetes,2FT9F@200643|Bacteroidia,22YGB@171551|Porphyromonadaceae 976|Bacteroidetes L 6-O-methylguanine DNA methyltransferase, DNA binding domain ogt - 2.1.1.63 ko:K00567,ko:K07443 - - - - ko00000,ko01000,ko03400 - - - DNA_binding_1 LIIFOLDO_01951 435591.BDI_2037 5.32e-77 231.0 2E8ZQ@1|root,33397@2|Bacteria,4P3N3@976|Bacteroidetes,2FY33@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01952 1218103.CIN01S_02_02200 7.16e-10 57.4 COG3059@1|root,COG3059@2|Bacteria,4NQYX@976|Bacteroidetes,1I3UV@117743|Flavobacteriia,3ZRSP@59732|Chryseobacterium 976|Bacteroidetes S Protein of unknown function, DUF417 - - - - - - - - - - - - DUF417 LIIFOLDO_01953 435591.BDI_2038 3.9e-269 735.0 COG0225@1|root,COG0229@1|root,COG0225@2|Bacteria,COG0229@2|Bacteria,4NMAJ@976|Bacteroidetes,2FNTE@200643|Bacteroidia,22XGW@171551|Porphyromonadaceae 976|Bacteroidetes O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine msrA - 1.8.4.11,1.8.4.12 ko:K12267 - - - - ko00000,ko01000 - - - PMSR,SelR LIIFOLDO_01954 435591.BDI_2039 3.45e-199 551.0 COG2207@1|root,COG2207@2|Bacteria,4NRFM@976|Bacteroidetes,2FMZV@200643|Bacteroidia,22Y4E@171551|Porphyromonadaceae 976|Bacteroidetes K Helix-turn-helix domain - - - - - - - - - - - - HTH_18 LIIFOLDO_01955 435591.BDI_2040 2.65e-213 588.0 COG3449@1|root,COG3871@1|root,COG3449@2|Bacteria,COG3871@2|Bacteria,4NTQW@976|Bacteroidetes,2FS0Y@200643|Bacteroidia 976|Bacteroidetes K stress protein (general stress protein 26) - - - - - - - - - - - - Pyrid_ox_like LIIFOLDO_01956 226186.BT_1904 1.56e-127 371.0 COG2207@1|root,COG2207@2|Bacteria,4NHWS@976|Bacteroidetes,2FPZ5@200643|Bacteroidia,4APAA@815|Bacteroidaceae 976|Bacteroidetes K methylphosphotriester-DNA alkyltransferase (AraC XylS family) - - - ko:K13652 - - - - ko00000,ko03000 - - - GyrI-like,HTH_18 LIIFOLDO_01957 435591.BDI_2043 2.22e-114 332.0 COG1357@1|root,COG1357@2|Bacteria,4NQ3B@976|Bacteroidetes,2FPSW@200643|Bacteroidia,22YNV@171551|Porphyromonadaceae 976|Bacteroidetes S Pentapeptide repeats (8 copies) - - - - - - - - - - - - Pentapeptide,Pentapeptide_4 LIIFOLDO_01958 435591.BDI_2044 6.7e-56 174.0 COG2388@1|root,COG2388@2|Bacteria,4NVD1@976|Bacteroidetes,2FU4P@200643|Bacteroidia,22YSA@171551|Porphyromonadaceae 976|Bacteroidetes S GCN5-related N-acetyl-transferase - - - ko:K06975 - - - - ko00000 - - - Acetyltransf_CG LIIFOLDO_01959 435591.BDI_2045 0.0 2100.0 2C5U1@1|root,2Z80K@2|Bacteria,4NG4G@976|Bacteroidetes,2FRC3@200643|Bacteroidia,22Y97@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - DUF748 LIIFOLDO_01960 435591.BDI_2046 6e-244 669.0 COG1082@1|root,COG1082@2|Bacteria,4NJ3Z@976|Bacteroidetes,2FX90@200643|Bacteroidia,231YG@171551|Porphyromonadaceae 976|Bacteroidetes G Xylose isomerase-like TIM barrel - - - - - - - - - - - - AP_endonuc_2 LIIFOLDO_01961 435591.BDI_2047 0.0 998.0 COG0673@1|root,COG0673@2|Bacteria,4NGHJ@976|Bacteroidetes,2FQNW@200643|Bacteroidia,22ZVG@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA LIIFOLDO_01962 435591.BDI_2593 2.25e-307 837.0 COG3746@1|root,COG3746@2|Bacteria,4NIRE@976|Bacteroidetes,2FR58@200643|Bacteroidia,22X03@171551|Porphyromonadaceae 976|Bacteroidetes P phosphate-selective porin O and P - - - - - - - - - - - - Porin_O_P LIIFOLDO_01963 435591.BDI_2594 1.01e-253 696.0 COG2070@1|root,COG2070@2|Bacteria,4NF8Z@976|Bacteroidetes,2FMYA@200643|Bacteroidia,22X1K@171551|Porphyromonadaceae 976|Bacteroidetes S 2-nitropropane dioxygenase - - 1.3.1.9 ko:K02371 ko00061,ko01100,ko01212,map00061,map01100,map01212 M00083 R04429,R04724,R04955,R04958,R04961,R04966,R04969,R07765 RC00052,RC00076 ko00000,ko00001,ko00002,ko01000,ko01004 - - - NMO LIIFOLDO_01964 435591.BDI_2595 0.0 943.0 COG0457@1|root,COG2885@1|root,COG0457@2|Bacteria,COG2885@2|Bacteria,4NJN8@976|Bacteroidetes,2FMCB@200643|Bacteroidia,22WPJ@171551|Porphyromonadaceae 976|Bacteroidetes M Domain of unknown function, B. Theta Gene description (DUF3868) - - - - - - - - - - - - DUF3868,OmpA,TPR_1,TPR_2,TPR_8 LIIFOLDO_01965 435591.BDI_2596 1.61e-141 398.0 COG2885@1|root,COG2885@2|Bacteria,4NN9C@976|Bacteroidetes,2FPCM@200643|Bacteroidia,22Y84@171551|Porphyromonadaceae 976|Bacteroidetes M Protein of unknown function (DUF3575) - - - - - - - - - - - - DUF3575 LIIFOLDO_01966 435591.BDI_2597 1.71e-139 394.0 COG2197@1|root,COG2197@2|Bacteria,4NNVV@976|Bacteroidetes,2FN9B@200643|Bacteroidia,22Y0C@171551|Porphyromonadaceae 976|Bacteroidetes K Transcriptional regulator, LuxR family - - - - - - - - - - - - GerE LIIFOLDO_01967 435591.BDI_2598 8.39e-181 503.0 COG2846@1|root,COG2846@2|Bacteria,4NMCR@976|Bacteroidetes,2FMRX@200643|Bacteroidia,22XMP@171551|Porphyromonadaceae 976|Bacteroidetes D Di-iron-containing protein involved in the repair of iron-sulfur clusters - - - ko:K07322 - - - - ko00000 - - - Hemerythrin LIIFOLDO_01968 435591.BDI_2599 5.94e-285 777.0 COG0251@1|root,COG0251@2|Bacteria,4NEVA@976|Bacteroidetes,2FN38@200643|Bacteroidia,22X36@171551|Porphyromonadaceae 976|Bacteroidetes J translation initiation inhibitor, yjgF family - - - - - - - - - - - - Ribonuc_L-PSP LIIFOLDO_01969 435591.BDI_2600 3.69e-168 469.0 2B7EF@1|root,320I7@2|Bacteria,4NRYF@976|Bacteroidetes,2FQTT@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01970 435591.BDI_2601 9.93e-307 835.0 COG3746@1|root,COG3746@2|Bacteria,4NI6X@976|Bacteroidetes,2FPGI@200643|Bacteroidia 976|Bacteroidetes P phosphate-selective porin O and P - - - - - - - - - - - - Porin_O_P LIIFOLDO_01971 435591.BDI_2602 0.0 959.0 COG3488@1|root,COG3488@2|Bacteria,4NGBS@976|Bacteroidetes,2FNKM@200643|Bacteroidia,22W7J@171551|Porphyromonadaceae 976|Bacteroidetes C Di-haem oxidoreductase, putative peroxidase - - - - - - - - - - - - DHOR LIIFOLDO_01972 435591.BDI_2603 2.63e-289 790.0 COG3487@1|root,COG3487@2|Bacteria,4PPY8@976|Bacteroidetes,2G1AF@200643|Bacteroidia,231BZ@171551|Porphyromonadaceae 976|Bacteroidetes P Imelysin - - - ko:K07231 - - - - ko00000 - - - Peptidase_M75 LIIFOLDO_01973 435591.BDI_2604 0.0 881.0 COG2433@1|root,COG2433@2|Bacteria,4PKWF@976|Bacteroidetes,2G069@200643|Bacteroidia,22XD0@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location OuterMembrane, score - - - - - - - - - - - - Porin_O_P LIIFOLDO_01974 435591.BDI_2605 8.55e-76 233.0 2C62U@1|root,2ZVV4@2|Bacteria,4P8GH@976|Bacteroidetes,2FPVS@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01975 435591.BDI_2605 3.22e-112 328.0 2C62U@1|root,2ZVV4@2|Bacteria,4P8GH@976|Bacteroidetes,2FPVS@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01977 435591.BDI_2608 5.58e-89 261.0 COG3943@1|root,COG3943@2|Bacteria 2|Bacteria - - rhuM - - - - - - - - - - - Virulence_RhuM LIIFOLDO_01978 435591.BDI_2609 0.0 1051.0 COG3119@1|root,COG3119@2|Bacteria,4NFC9@976|Bacteroidetes,2FMH6@200643|Bacteroidia,22VWT@171551|Porphyromonadaceae 976|Bacteroidetes P Domain of unknown function arsA - - - - - - - - - - - DUF4994,Sulfatase LIIFOLDO_01979 435591.BDI_2610 0.0 1089.0 COG3119@1|root,COG3119@2|Bacteria,4NJ83@976|Bacteroidetes,2FM83@200643|Bacteroidia,22XH2@171551|Porphyromonadaceae 976|Bacteroidetes P Type I phosphodiesterase / nucleotide pyrophosphatase - - - - - - - - - - - - DUF4976,Sulfatase LIIFOLDO_01980 435591.BDI_2611 9.05e-152 427.0 COG1280@1|root,COG1280@2|Bacteria,4NMR9@976|Bacteroidetes,2FM4B@200643|Bacteroidia,22XRM@171551|Porphyromonadaceae 976|Bacteroidetes E Translocator protein, LysE family - - - - - - - - - - - - LysE LIIFOLDO_01981 435591.BDI_2612 5.71e-152 427.0 COG2199@1|root,COG3706@2|Bacteria,4NPU1@976|Bacteroidetes,2FNEU@200643|Bacteroidia,22XUT@171551|Porphyromonadaceae 976|Bacteroidetes T Carbohydrate-binding family 9 - - - - - - - - - - - - CBM9_2 LIIFOLDO_01982 435591.BDI_2613 1.72e-90 265.0 2EFPT@1|root,339FT@2|Bacteria,4NWQF@976|Bacteroidetes,2FT7Q@200643|Bacteroidia,22YKQ@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 9.46 - - - - - - - - - - - - - LIIFOLDO_01983 435591.BDI_2614 3.57e-136 386.0 COG1595@1|root,COG1595@2|Bacteria,4NSVA@976|Bacteroidetes,2FMT6@200643|Bacteroidia,22Y4K@171551|Porphyromonadaceae 976|Bacteroidetes K Belongs to the sigma-70 factor family. ECF subfamily - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 LIIFOLDO_01984 435591.BDI_2615 6.61e-71 214.0 2C1AN@1|root,33DAZ@2|Bacteria,4NY1H@976|Bacteroidetes 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_01985 435591.BDI_2616 0.0 1310.0 COG0642@1|root,COG2205@2|Bacteria,4NZXR@976|Bacteroidetes,2FN6M@200643|Bacteroidia,231GH@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - HATPase_c,HisKA LIIFOLDO_01986 435591.BDI_2617 2.52e-294 806.0 COG0642@1|root,COG2205@2|Bacteria,4NKBC@976|Bacteroidetes,2FNE0@200643|Bacteroidia,22WMG@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase-like ATPases - - - - - - - - - - - - HATPase_c,HisKA LIIFOLDO_01990 435591.BDI_0663 4.38e-74 222.0 COG0292@1|root,COG0292@2|Bacteria,4NNKU@976|Bacteroidetes,2FSHF@200643|Bacteroidia,22XVI@171551|Porphyromonadaceae 976|Bacteroidetes J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit rplT GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - ko:K02887 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L20 LIIFOLDO_01991 435591.BDI_0662 2.58e-37 125.0 COG0291@1|root,COG0291@2|Bacteria,4NUVR@976|Bacteroidetes,2FUKE@200643|Bacteroidia,22YNZ@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the bacterial ribosomal protein bL35 family rpmI GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - ko:K02916 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L35p LIIFOLDO_01992 435591.BDI_0661 3.53e-70 217.0 COG0290@1|root,COG0290@2|Bacteria,4NIZ5@976|Bacteroidetes,2FNF1@200643|Bacteroidia,22X5B@171551|Porphyromonadaceae 976|Bacteroidetes J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins infC GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - ko:K02520 - - - - ko00000,ko03012,ko03029 - - - IF3_C,IF3_N LIIFOLDO_01993 435591.BDI_0660 0.0 1313.0 COG0441@1|root,COG0441@2|Bacteria,4NEFT@976|Bacteroidetes,2FMAU@200643|Bacteroidia,22VXM@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) thrS GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 ko:K01868 ko00970,map00970 M00359,M00360 R03663 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - HGTP_anticodon,TGS,tRNA-synt_2b,tRNA_SAD LIIFOLDO_01994 435591.BDI_0659 2.02e-211 617.0 COG0457@1|root,COG0457@2|Bacteria,4NGGZ@976|Bacteroidetes,2FMHN@200643|Bacteroidia,22WD9@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat - - - - - - - - - - - - TPR_1,TPR_11,TPR_16,TPR_2,TPR_6,TPR_8,TPR_9 LIIFOLDO_01995 435591.BDI_0658 6.09e-70 211.0 COG4770@1|root,COG4770@2|Bacteria,4NWQ0@976|Bacteroidetes,2FUXX@200643|Bacteroidia,22YSD@171551|Porphyromonadaceae 976|Bacteroidetes I Biotin-requiring enzyme - - - - - - - - - - - - Biotin_lipoyl LIIFOLDO_01996 435591.BDI_0657 0.0 1017.0 COG4799@1|root,COG4799@2|Bacteria,4NEMJ@976|Bacteroidetes,2FPY6@200643|Bacteroidia,22X9X@171551|Porphyromonadaceae 976|Bacteroidetes I COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) - - - - - - - - - - - - Carboxyl_trans LIIFOLDO_01997 435591.BDI_0656 4.28e-131 372.0 COG0242@1|root,COG0242@2|Bacteria,4NFB4@976|Bacteroidetes,2FNEJ@200643|Bacteroidia,22XVR@171551|Porphyromonadaceae 976|Bacteroidetes J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions def - 3.5.1.88 ko:K01462 - - - - ko00000,ko01000 - - - Pep_deformylase LIIFOLDO_01998 435591.BDI_0655 9.52e-92 269.0 COG0816@1|root,COG0816@2|Bacteria,4NQ8B@976|Bacteroidetes,2FT2Q@200643|Bacteroidia,22Y74@171551|Porphyromonadaceae 976|Bacteroidetes L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA ruvX GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - ko:K07447 - - - - ko00000,ko01000 - - - RuvX LIIFOLDO_01999 435591.BDI_0654 0.0 909.0 COG1086@1|root,COG2148@1|root,COG1086@2|Bacteria,COG2148@2|Bacteria,4NER4@976|Bacteroidetes,2FNC2@200643|Bacteroidia,22VY7@171551|Porphyromonadaceae 976|Bacteroidetes M CoA-binding domain wcaJ_2 - 2.7.8.6 ko:K00996,ko:K03606 ko05111,map05111 - - - ko00000,ko00001,ko01000,ko01005 - - - Bac_transf,CoA_binding_3 LIIFOLDO_02000 435591.BDI_0653 2.71e-282 770.0 COG2885@1|root,COG2885@2|Bacteria,4NKQC@976|Bacteroidetes,2FRBK@200643|Bacteroidia,22X13@171551|Porphyromonadaceae 976|Bacteroidetes M membrane - GO:0001871,GO:0003674,GO:0005215,GO:0005488,GO:0005575,GO:0006810,GO:0008150,GO:0015267,GO:0015288,GO:0016020,GO:0019867,GO:0022803,GO:0022829,GO:0022857,GO:0030246,GO:0030247,GO:0051179,GO:0051234,GO:0055085 - - - - - - - - - - OmpA LIIFOLDO_02001 435591.BDI_0652 1.5e-279 764.0 COG1089@1|root,COG1089@2|Bacteria,4NEB6@976|Bacteroidetes,2FMUP@200643|Bacteroidia,22X5T@171551|Porphyromonadaceae 976|Bacteroidetes M Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose gmd - 4.2.1.47 ko:K01711 ko00051,ko00520,ko01100,map00051,map00520,map01100 - R00888 RC00402 ko00000,ko00001,ko01000 - - - GDP_Man_Dehyd LIIFOLDO_02002 435591.BDI_0651 1.78e-264 723.0 COG0451@1|root,COG0451@2|Bacteria,4NDV4@976|Bacteroidetes,2FNA5@200643|Bacteroidia,22W0D@171551|Porphyromonadaceae 976|Bacteroidetes GM Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction fcl - 1.1.1.271 ko:K02377 ko00051,ko00520,ko01100,map00051,map00520,map01100 - R05692 RC01014 ko00000,ko00001,ko01000 - - - Epimerase LIIFOLDO_02003 435591.BDI_0650 1.72e-210 581.0 COG1209@1|root,COG1209@2|Bacteria,4NE1U@976|Bacteroidetes,2FNUA@200643|Bacteroidia,22WZT@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis rmlA - 2.7.7.24 ko:K00973 ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130 M00793 R02328 RC00002 ko00000,ko00001,ko00002,ko01000 - - - NTP_transferase LIIFOLDO_02004 435591.BDI_0649 3.31e-125 356.0 COG0438@1|root,COG0438@2|Bacteria,4NRBY@976|Bacteroidetes,2FRU9@200643|Bacteroidia 976|Bacteroidetes M Nucleoside 2-deoxyribosyltransferase like - - - - - - - - - - - - Nuc_deoxyri_tr2 LIIFOLDO_02005 435591.BDI_0648 6.28e-166 463.0 COG0363@1|root,COG0363@2|Bacteria,4NGB9@976|Bacteroidetes,2FNZF@200643|Bacteroidia,22XT3@171551|Porphyromonadaceae 976|Bacteroidetes G 6-phosphogluconolactonase pgl - 3.1.1.31 ko:K01057 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 M00004,M00006,M00008 R02035 RC00537 ko00000,ko00001,ko00002,ko01000 - - - Glucosamine_iso LIIFOLDO_02006 435591.BDI_0647 0.0 990.0 COG0364@1|root,COG0364@2|Bacteria,4NE59@976|Bacteroidetes,2FNER@200643|Bacteroidia,22WB5@171551|Porphyromonadaceae 976|Bacteroidetes G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone zwf - 1.1.1.363,1.1.1.49 ko:K00036 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230 M00004,M00006,M00008 R00835,R02736,R10907 RC00001,RC00066 ko00000,ko00001,ko00002,ko01000,ko04147 - - - G6PD_C,G6PD_N LIIFOLDO_02007 435591.BDI_0646 0.0 966.0 COG0362@1|root,COG0362@2|Bacteria,4NG05@976|Bacteroidetes,2FMFW@200643|Bacteroidia,22WS9@171551|Porphyromonadaceae 976|Bacteroidetes G Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH gnd - 1.1.1.343,1.1.1.44 ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 M00004,M00006 R01528,R10221 RC00001,RC00539 ko00000,ko00001,ko00002,ko01000 - - - 6PGD,NAD_binding_2 LIIFOLDO_02008 435591.BDI_0645 0.0 892.0 COG1249@1|root,COG1249@2|Bacteria,4NEMS@976|Bacteroidetes,2FPIZ@200643|Bacteroidia,22ZB5@171551|Porphyromonadaceae 976|Bacteroidetes C Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain merA - - ko:K21739 - - - - ko00000 - - - Pyr_redox_2,Pyr_redox_dim LIIFOLDO_02009 435591.BDI_0644 0.0 1142.0 COG0471@1|root,COG3273@1|root,COG0471@2|Bacteria,COG3273@2|Bacteria,4NF52@976|Bacteroidetes,2FM64@200643|Bacteroidia,22W62@171551|Porphyromonadaceae 976|Bacteroidetes P Sodium:sulfate symporter transmembrane region - - - - - - - - - - - - CitMHS,Na_sulph_symp,TrkA_C LIIFOLDO_02010 435591.BDI_0643 8.31e-225 619.0 COG4866@1|root,COG4866@2|Bacteria,4NGJE@976|Bacteroidetes,2FNB2@200643|Bacteroidia,22VZB@171551|Porphyromonadaceae 976|Bacteroidetes S Uncharacterised conserved protein (DUF2156) - - - ko:K01163 - - - - ko00000 - - - Acetyltransf_9,DUF2156 LIIFOLDO_02011 435591.BDI_0642 1.75e-229 632.0 COG4552@1|root,COG4552@2|Bacteria,4NP1R@976|Bacteroidetes,2FPE0@200643|Bacteroidia,22XV1@171551|Porphyromonadaceae 976|Bacteroidetes S Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_9,SCP2_2 LIIFOLDO_02012 435591.BDI_0641 3.49e-61 226.0 COG3391@1|root,COG3391@2|Bacteria,4NMAV@976|Bacteroidetes,2FNY4@200643|Bacteroidia,230UK@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4842) - - - - - - - - - - - - DUF4842 LIIFOLDO_02013 435591.BDI_2522 0.0 1648.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,4NJW1@976|Bacteroidetes,2FNET@200643|Bacteroidia,22WN6@171551|Porphyromonadaceae 976|Bacteroidetes EU Peptidase, S9A B C family, catalytic domain protein - - - - - - - - - - - - PD40,Peptidase_S9 LIIFOLDO_02014 435591.BDI_2521 0.0 1578.0 COG3525@1|root,COG3525@2|Bacteria,4NE08@976|Bacteroidetes,2FNAR@200643|Bacteroidia,22WBH@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 20, catalytic domain nagZ2 - 3.2.1.52 ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 M00079 R00022,R06004,R11316 RC00049 ko00000,ko00001,ko00002,ko01000,ko03110 - GH20 - CHB_HEX_C_1,F5_F8_type_C,Fn3_assoc,Glyco_hydro_20,Glyco_hydro_20b LIIFOLDO_02015 435591.BDI_2520 3.35e-213 587.0 COG0491@1|root,COG0491@2|Bacteria,4NE98@976|Bacteroidetes,2FQYG@200643|Bacteroidia,22XR4@171551|Porphyromonadaceae 976|Bacteroidetes S Metallo-beta-lactamase superfamily - - - - - - - - - - - - Lactamase_B LIIFOLDO_02016 435591.BDI_2519 0.0 2083.0 COG1629@1|root,COG1629@2|Bacteria,COG4771@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia,22WRD@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_02017 435591.BDI_2518 0.0 1197.0 2DB6Z@1|root,2Z7IY@2|Bacteria,4NIQG@976|Bacteroidetes,2FQ70@200643|Bacteroidia,22WEC@171551|Porphyromonadaceae 976|Bacteroidetes S Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_02018 1235803.C825_01201 3.28e-09 66.6 COG3391@1|root,COG3391@2|Bacteria 2|Bacteria CO amine dehydrogenase activity - - - - - - - - - - - - DUF4934,DUF5128 LIIFOLDO_02019 435591.BDI_2516 0.0 1050.0 COG1672@1|root,COG1672@2|Bacteria,4NIJ4@976|Bacteroidetes,2FM14@200643|Bacteroidia,22VXI@171551|Porphyromonadaceae 976|Bacteroidetes S Predicted AAA-ATPase - - - - - - - - - - - - AAA-ATPase_like,PDDEXK_9 LIIFOLDO_02020 435591.BDI_2515 0.0 1182.0 28KYZ@1|root,2ZAEB@2|Bacteria,4NHBZ@976|Bacteroidetes,2FP4X@200643|Bacteroidia 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - - LIIFOLDO_02021 435591.BDI_2514 0.0 1014.0 COG0823@1|root,COG0823@2|Bacteria,4NGH4@976|Bacteroidetes,2FN8G@200643|Bacteroidia,22Z72@171551|Porphyromonadaceae 976|Bacteroidetes U WD40-like Beta Propeller Repeat - - - - - - - - - - - - PD40 LIIFOLDO_02022 435591.BDI_2513 1.23e-223 616.0 COG0773@1|root,COG0773@2|Bacteria,4NF99@976|Bacteroidetes,2FQTW@200643|Bacteroidia,22Y3A@171551|Porphyromonadaceae 976|Bacteroidetes M Mur ligase middle domain mpl - 6.3.2.45,6.3.2.8 ko:K01924,ko:K02558 ko00471,ko00550,ko01100,map00471,map00550,map01100 - R03193 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Mur_ligase,Mur_ligase_C,Mur_ligase_M LIIFOLDO_02023 435591.BDI_2512 8.64e-125 355.0 2CGY7@1|root,2ZGS8@2|Bacteria,4NREX@976|Bacteroidetes,2FPIK@200643|Bacteroidia,22XT2@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4924) - - - - - - - - - - - - DUF4924 LIIFOLDO_02024 435591.BDI_2511 1.01e-48 162.0 COG1091@1|root,COG1091@2|Bacteria,4NE3K@976|Bacteroidetes,2FN7H@200643|Bacteroidia,22WWK@171551|Porphyromonadaceae 976|Bacteroidetes M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose rfbD - 1.1.1.133 ko:K00067 ko00521,ko00523,ko01130,map00521,map00523,map01130 M00793 R02777 RC00182 ko00000,ko00001,ko00002,ko01000 - - - RmlD_sub_bind LIIFOLDO_02025 435591.BDI_2511 1.66e-154 436.0 COG1091@1|root,COG1091@2|Bacteria,4NE3K@976|Bacteroidetes,2FN7H@200643|Bacteroidia,22WWK@171551|Porphyromonadaceae 976|Bacteroidetes M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose rfbD - 1.1.1.133 ko:K00067 ko00521,ko00523,ko01130,map00521,map00523,map01130 M00793 R02777 RC00182 ko00000,ko00001,ko00002,ko01000 - - - RmlD_sub_bind LIIFOLDO_02026 435591.BDI_2510 0.0 1050.0 COG4108@1|root,COG4108@2|Bacteria,4NFEZ@976|Bacteroidetes,2FN0A@200643|Bacteroidia,22W67@171551|Porphyromonadaceae 976|Bacteroidetes J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP prfC - - ko:K02837 - - - - ko00000,ko03012 - - - GTP_EFTU,GTP_EFTU_D2,RF3_C LIIFOLDO_02027 435591.BDI_2509 3.91e-245 672.0 COG1477@1|root,COG1477@2|Bacteria,4NGEK@976|Bacteroidetes,2FKZQ@200643|Bacteroidia,22W78@171551|Porphyromonadaceae 976|Bacteroidetes H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein apbE - 2.7.1.180 ko:K03734 - - - - ko00000,ko01000 - - - ApbE LIIFOLDO_02028 435591.BDI_2508 1.34e-163 457.0 COG1011@1|root,COG1011@2|Bacteria,4NM66@976|Bacteroidetes,2FMM5@200643|Bacteroidia,22XNU@171551|Porphyromonadaceae 976|Bacteroidetes S Hydrolase yjjG - - ko:K07025 - - - - ko00000 - - - HAD_2 LIIFOLDO_02029 435591.BDI_2507 7.53e-161 456.0 COG4372@1|root,COG4372@2|Bacteria,4NJGZ@976|Bacteroidetes,2G2H0@200643|Bacteroidia,22WW1@171551|Porphyromonadaceae 976|Bacteroidetes S Transposase - - - - - - - - - - - - - LIIFOLDO_02030 435591.BDI_2506 7.41e-163 456.0 COG0313@1|root,COG0313@2|Bacteria,4NFQM@976|Bacteroidetes,2FMU1@200643|Bacteroidia,22W2B@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA rsmI - 2.1.1.198 ko:K07056 - - - - ko00000,ko01000,ko03009 - - - TP_methylase LIIFOLDO_02031 435591.BDI_2505 8.86e-133 380.0 2EKSY@1|root,33EGP@2|Bacteria,4NXJC@976|Bacteroidetes,2FSBT@200643|Bacteroidia,22YZ5@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG23390 non supervised orthologous group - - - - - - - - - - - - - LIIFOLDO_02032 435591.BDI_2504 0.0 940.0 COG0507@1|root,COG0507@2|Bacteria,4NDYK@976|Bacteroidetes,2FNT1@200643|Bacteroidia,22WXS@171551|Porphyromonadaceae 976|Bacteroidetes L COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member recD2_2 - 3.1.11.5 ko:K01144 - - - - ko00000,ko01000 - - - AAA_30,UvrD_C_2 LIIFOLDO_02033 435591.BDI_2381 2.7e-62 191.0 COG0051@1|root,COG0051@2|Bacteria,4NQ65@976|Bacteroidetes,2FT32@200643|Bacteroidia,22Y83@171551|Porphyromonadaceae 976|Bacteroidetes J Involved in the binding of tRNA to the ribosomes rpsJ GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02946 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S10 LIIFOLDO_02034 435591.BDI_2382 0.0 1400.0 COG0480@1|root,COG0480@2|Bacteria,4NE9X@976|Bacteroidetes,2FM1M@200643|Bacteroidia,22W0K@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome fusA - - ko:K02355 - - - - ko00000,ko03012,ko03029 - - - EFG_C,EFG_II,EFG_IV,GTP_EFTU,GTP_EFTU_D2 LIIFOLDO_02035 435591.BDI_2383 9.74e-108 310.0 COG0049@1|root,COG0049@2|Bacteria,4NEEM@976|Bacteroidetes,2FNKP@200643|Bacteroidia,22WEA@171551|Porphyromonadaceae 976|Bacteroidetes J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA rpsG GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02992 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S7 LIIFOLDO_02036 435591.BDI_2384 1.52e-89 263.0 COG0048@1|root,COG0048@2|Bacteria,4NM3Y@976|Bacteroidetes,2FRY7@200643|Bacteroidia,22XMF@171551|Porphyromonadaceae 976|Bacteroidetes J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit rpsL GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02950 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosom_S12_S23 LIIFOLDO_02037 435591.BDI_2385 1.07e-135 384.0 COG0776@1|root,COG0776@2|Bacteria,4P08G@976|Bacteroidetes,2FQWJ@200643|Bacteroidia 976|Bacteroidetes L Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - Bac_DNA_binding LIIFOLDO_02038 435591.BDI_2386 1.73e-217 599.0 COG5545@1|root,COG5545@2|Bacteria,4P2KI@976|Bacteroidetes,2FXHQ@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_02039 435591.BDI_2387 0.0 1201.0 COG0323@1|root,COG0323@2|Bacteria,4NDWJ@976|Bacteroidetes,2FMIK@200643|Bacteroidia,22X0H@171551|Porphyromonadaceae 976|Bacteroidetes L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex mutL GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - ko:K03572 ko03430,map03430 - - - ko00000,ko00001,ko03400 - - - DNA_mis_repair,HATPase_c_3,MutL_C LIIFOLDO_02040 435591.BDI_2388 2.81e-68 206.0 2EH2Q@1|root,33AUP@2|Bacteria,4NXI6@976|Bacteroidetes,2FT92@200643|Bacteroidia,22YX5@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG23401 non supervised orthologous group - - - - - - - - - - - - - LIIFOLDO_02041 435591.BDI_2389 0.0 1072.0 COG1934@1|root,COG1934@2|Bacteria,4PKT4@976|Bacteroidetes,2G3HG@200643|Bacteroidia,22W2I@171551|Porphyromonadaceae 976|Bacteroidetes S OstA-like protein - - - - - - - - - - - - OstA_2 LIIFOLDO_02042 435591.BDI_2390 0.0 882.0 COG0760@1|root,COG0760@2|Bacteria,4NEW0@976|Bacteroidetes,2FMDU@200643|Bacteroidia,22WD3@171551|Porphyromonadaceae 976|Bacteroidetes M peptidylprolyl isomerase surA - 5.2.1.8 ko:K03771 - - - - ko00000,ko01000,ko03110 - - - Rotamase,SurA_N_3 LIIFOLDO_02043 435591.BDI_2391 2.71e-199 552.0 COG0760@1|root,COG0760@2|Bacteria,4NG2P@976|Bacteroidetes,2FMWD@200643|Bacteroidia,22XXI@171551|Porphyromonadaceae 976|Bacteroidetes O COG NOG23400 non supervised orthologous group - - - - - - - - - - - - Rotamase_2 LIIFOLDO_02044 435591.BDI_2392 0.0 1019.0 COG0760@1|root,COG0760@2|Bacteria,4NGIR@976|Bacteroidetes,2FNS9@200643|Bacteroidia,22VWY@171551|Porphyromonadaceae 976|Bacteroidetes M peptidylprolyl isomerase - - 5.2.1.8 ko:K03771 - - - - ko00000,ko01000,ko03110 - - - Rotamase,Rotamase_2,Rotamase_3 LIIFOLDO_02045 435591.BDI_2393 0.0 941.0 COG0516@1|root,COG0517@1|root,COG0516@2|Bacteria,COG0517@2|Bacteria,4NDXQ@976|Bacteroidetes,2FMKX@200643|Bacteroidia,22VX7@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth guaB - 1.1.1.205 ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 M00050 R01130,R08240 RC00143,RC02207 ko00000,ko00001,ko00002,ko01000,ko04147 - - - CBS,IMPDH LIIFOLDO_02046 435591.BDI_2394 0.0 1419.0 COG0514@1|root,COG0514@2|Bacteria,4NEB4@976|Bacteroidetes,2FMBR@200643|Bacteroidia,22WPI@171551|Porphyromonadaceae 976|Bacteroidetes L ATP-dependent DNA helicase RecQ recQ - 3.6.4.12 ko:K03654 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03400 - - - DEAD,HRDC,Helicase_C,RQC,RecQ_Zn_bind LIIFOLDO_02047 435591.BDI_2395 3.39e-293 800.0 COG1219@1|root,COG1219@2|Bacteria,4NE1B@976|Bacteroidetes,2FMQV@200643|Bacteroidia,22W68@171551|Porphyromonadaceae 976|Bacteroidetes O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP clpX GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - ko:K03544 ko04112,map04112 - - - ko00000,ko00001,ko03110 - - - AAA_2,ClpB_D2-small,zf-C4_ClpX LIIFOLDO_02048 435591.BDI_2396 5.04e-154 432.0 COG0740@1|root,COG0740@2|Bacteria,4NE20@976|Bacteroidetes,2FN8E@200643|Bacteroidia,22W88@171551|Porphyromonadaceae 976|Bacteroidetes O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins clpP - 3.4.21.92 ko:K01358 ko04112,ko04212,map04112,map04212 - - - ko00000,ko00001,ko01000,ko01002 - - - CLP_protease LIIFOLDO_02049 435591.BDI_2397 1.29e-315 860.0 COG0544@1|root,COG0544@2|Bacteria,4NE99@976|Bacteroidetes,2FM7B@200643|Bacteroidia,22WV0@171551|Porphyromonadaceae 976|Bacteroidetes O Trigger factor tig - - ko:K03545 - - - - ko00000 - - - Trigger_C,Trigger_N LIIFOLDO_02050 435591.BDI_2398 2.31e-201 558.0 COG1266@1|root,COG1266@2|Bacteria,4NHE1@976|Bacteroidetes,2FT47@200643|Bacteroidia,22YC2@171551|Porphyromonadaceae 976|Bacteroidetes S CAAX protease self-immunity - - - ko:K07052 - - - - ko00000 - - - Abi LIIFOLDO_02051 435591.BDI_2399 4.63e-174 486.0 COG1137@1|root,COG1137@2|Bacteria,4NDUG@976|Bacteroidetes,2FKZE@200643|Bacteroidia,22XAY@171551|Porphyromonadaceae 976|Bacteroidetes S ABC transporter lptB - - ko:K06861 ko02010,map02010 M00320 - - ko00000,ko00001,ko00002,ko01000,ko02000 1.B.42.1 - - ABC_tran,BCA_ABC_TP_C LIIFOLDO_02052 435591.BDI_2400 2.94e-290 790.0 COG3507@1|root,COG3507@2|Bacteria,4PKZY@976|Bacteroidetes,2G09G@200643|Bacteroidia,22WA2@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 43 - - - - - - - - - - - - Glyco_hydro_43 LIIFOLDO_02053 435591.BDI_2401 1.38e-154 436.0 COG0767@1|root,COG0767@2|Bacteria,4NEZ8@976|Bacteroidetes,2FNVR@200643|Bacteroidia,22W48@171551|Porphyromonadaceae 976|Bacteroidetes Q COG0767 ABC-type transport system involved in resistance to organic solvents, permease component mlaE - - ko:K02066 ko02010,map02010 M00210,M00669,M00670 - - ko00000,ko00001,ko00002,ko02000 3.A.1.27 - - MlaE LIIFOLDO_02054 435591.BDI_2402 2.49e-181 504.0 COG1127@1|root,COG1127@2|Bacteria,4NETG@976|Bacteroidetes,2FM5W@200643|Bacteroidia,22X10@171551|Porphyromonadaceae 976|Bacteroidetes Q ABC transporter, ATP-binding protein metN - - ko:K02065 ko02010,map02010 M00210,M00669,M00670 - - ko00000,ko00001,ko00002,ko02000 3.A.1.27 - - ABC_tran LIIFOLDO_02055 435591.BDI_2403 2.51e-304 830.0 COG0192@1|root,COG0192@2|Bacteria,4NG7Y@976|Bacteroidetes,2FNW8@200643|Bacteroidia,22WZI@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme metK - 2.5.1.6 ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 M00034,M00035,M00368,M00609 R00177,R04771 RC00021,RC01211 ko00000,ko00001,ko00002,ko01000 - - - S-AdoMet_synt_C,S-AdoMet_synt_M,S-AdoMet_synt_N LIIFOLDO_02057 435591.BDI_1795 0.0 1163.0 COG0737@1|root,COG0737@2|Bacteria,4NGIB@976|Bacteroidetes,2FNGG@200643|Bacteroidia,22XQT@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the 5'-nucleotidase family cpdB - 3.1.3.5,3.1.3.6,3.1.4.16,3.6.1.45 ko:K01119,ko:K11751 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 - R00183,R00511,R00963,R01126,R01227,R01562,R01569,R01664,R01877,R01968,R02088,R02102,R02148,R02323,R02370,R02719,R03346,R03537,R03538,R03929,R05135 RC00017,RC00078,RC00296 ko00000,ko00001,ko01000 - - - 5_nucleotid_C,Metallophos LIIFOLDO_02058 435591.BDI_1796 0.0 1678.0 COG3408@1|root,COG3408@2|Bacteria,4NHHR@976|Bacteroidetes,2FQXQ@200643|Bacteroidia 976|Bacteroidetes G Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - - - - - - - - - - Bac_rhamnosid,Bac_rhamnosid6H,Bac_rhamnosid_C,Bac_rhamnosid_N LIIFOLDO_02059 435591.BDI_1797 3.12e-178 497.0 COG0716@1|root,COG2221@1|root,COG0716@2|Bacteria,COG2221@2|Bacteria,4PMXY@976|Bacteroidetes,2G0K8@200643|Bacteroidia,2324S@171551|Porphyromonadaceae 976|Bacteroidetes C 4Fe-4S binding domain - - - - - - - - - - - - Fer4 LIIFOLDO_02060 435591.BDI_1798 1.21e-119 342.0 COG0526@1|root,COG0526@2|Bacteria,4NR1K@976|Bacteroidetes,2FS53@200643|Bacteroidia,22YKA@171551|Porphyromonadaceae 976|Bacteroidetes CO SCO1/SenC - - - - - - - - - - - - AhpC-TSA,Redoxin LIIFOLDO_02061 435591.BDI_1799 1.36e-131 374.0 COG1014@1|root,COG1014@2|Bacteria,4NGN3@976|Bacteroidetes,2FP78@200643|Bacteroidia,22X20@171551|Porphyromonadaceae 976|Bacteroidetes C Indolepyruvate iorB - 1.2.7.8 ko:K00180 - - - - br01601,ko00000,ko01000 - - - POR LIIFOLDO_02062 435591.BDI_1800 0.0 1064.0 COG4231@1|root,COG4231@2|Bacteria,4NJM1@976|Bacteroidetes,2FMYS@200643|Bacteroidia,22X57@171551|Porphyromonadaceae 976|Bacteroidetes C Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates iorA - 1.2.7.8 ko:K00179 - - - - br01601,ko00000,ko01000 - - - POR_N,TPP_enzyme_C LIIFOLDO_02063 435591.BDI_1801 1.01e-254 698.0 COG1559@1|root,COG1559@2|Bacteria,4NG17@976|Bacteroidetes,2FMVX@200643|Bacteroidia,22W7W@171551|Porphyromonadaceae 976|Bacteroidetes S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation mltG - - ko:K07082 - - - - ko00000 - - - YceG LIIFOLDO_02065 435591.BDI_1803 8.34e-132 375.0 COG1961@1|root,COG1961@2|Bacteria,4NJM8@976|Bacteroidetes,2FMQS@200643|Bacteroidia,22XYK@171551|Porphyromonadaceae 976|Bacteroidetes L Resolvase, N terminal domain - - - - - - - - - - - - HTH_7,Resolvase LIIFOLDO_02066 435591.BDI_1804 0.0 1347.0 COG0045@1|root,COG1042@1|root,COG0045@2|Bacteria,COG1042@2|Bacteria,4NFTI@976|Bacteroidetes,2FNSJ@200643|Bacteroidia,22WFU@171551|Porphyromonadaceae 976|Bacteroidetes C CoA ligase - - - ko:K09181 - - - - ko00000 - - - ATP-grasp_5,CoA_binding_2,Succ_CoA_lig LIIFOLDO_02067 435591.BDI_1805 6.22e-163 457.0 COG0378@1|root,COG0378@2|Bacteria,4NJ0P@976|Bacteroidetes,2FSAE@200643|Bacteroidia,22XN0@171551|Porphyromonadaceae 976|Bacteroidetes KO CobW/HypB/UreG, nucleotide-binding domain hypB - - ko:K04652 - - - - ko00000,ko03110 - - - cobW LIIFOLDO_02068 435591.BDI_1806 1.16e-74 223.0 COG0375@1|root,COG0375@2|Bacteria,4NWR5@976|Bacteroidetes,2FV7V@200643|Bacteroidia,22YT9@171551|Porphyromonadaceae 976|Bacteroidetes S Probably plays a role in a hydrogenase nickel cofactor insertion step hypA - - ko:K04651 - - - - ko00000,ko03110 - - - HypA LIIFOLDO_02069 435591.BDI_1807 0.0 1550.0 COG0068@1|root,COG0068@2|Bacteria,4NIZ1@976|Bacteroidetes,2FRRN@200643|Bacteroidia,22X9I@171551|Porphyromonadaceae 976|Bacteroidetes O Acylphosphatase - - - ko:K04656 - - - - ko00000 - - - Acylphosphatase,Peptidase_M22,Sua5_yciO_yrdC,zf-HYPF LIIFOLDO_02070 435591.BDI_1808 6.13e-48 153.0 COG0298@1|root,COG0298@2|Bacteria,4NWHY@976|Bacteroidetes,2FV3C@200643|Bacteroidia,22YSZ@171551|Porphyromonadaceae 976|Bacteroidetes O HupF/HypC family - - - ko:K04653 - - - - ko00000 - - - HupF_HypC LIIFOLDO_02071 435591.BDI_1809 2.85e-266 728.0 COG0409@1|root,COG0409@2|Bacteria,4NIM8@976|Bacteroidetes,2FQVF@200643|Bacteroidia,22XFK@171551|Porphyromonadaceae 976|Bacteroidetes O Hydrogenase formation hypA family - - - ko:K04654 - - - - ko00000 - - - HypD LIIFOLDO_02072 435591.BDI_1810 6.84e-253 693.0 COG0309@1|root,COG0309@2|Bacteria,4NG57@976|Bacteroidetes,2FNVB@200643|Bacteroidia,22WZP@171551|Porphyromonadaceae 976|Bacteroidetes O AIR synthase related protein, N-terminal domain - - - ko:K04655 - - - - ko00000 - - - AIRS,AIRS_C LIIFOLDO_02073 435591.BDI_1811 2.67e-274 749.0 COG1740@1|root,COG1740@2|Bacteria,4NK1F@976|Bacteroidetes,2FRD2@200643|Bacteroidia,22XC4@171551|Porphyromonadaceae 976|Bacteroidetes C NiFe/NiFeSe hydrogenase small subunit C-terminal - - 1.12.99.6 ko:K06282 ko00633,ko01120,map00633,map01120 - R08034 RC00250 ko00000,ko00001,ko01000 - - - NiFe_hyd_SSU_C,Oxidored_q6 LIIFOLDO_02074 435591.BDI_1812 0.0 1182.0 COG0374@1|root,COG0374@2|Bacteria,4NJIP@976|Bacteroidetes,2FRI3@200643|Bacteroidia,22XDW@171551|Porphyromonadaceae 976|Bacteroidetes C Nickel-dependent hydrogenase - - 1.12.99.6 ko:K06281 ko00633,ko01120,map00633,map01120 - R08034 RC00250 ko00000,ko00001,ko01000 - - - NiFeSe_Hases LIIFOLDO_02075 435591.BDI_1813 3.28e-176 491.0 COG1969@1|root,COG1969@2|Bacteria,4NIDY@976|Bacteroidetes,2FR26@200643|Bacteroidia,22VWC@171551|Porphyromonadaceae 976|Bacteroidetes C Domain of unknown function (DUF4405) - - - ko:K03620 ko02020,map02020 - - - ko00000,ko00001 - - - Ni_hydr_CYTB LIIFOLDO_02076 435591.BDI_1814 7.7e-110 316.0 COG0680@1|root,COG0680@2|Bacteria,4NRQY@976|Bacteroidetes,2FTHI@200643|Bacteroidia,22Y8D@171551|Porphyromonadaceae 976|Bacteroidetes C Hydrogenase maturation protease - - - ko:K03605 - - - - ko00000,ko01000,ko01002 - - - HycI LIIFOLDO_02077 435591.BDI_1815 1.02e-179 499.0 COG0580@1|root,COG0580@2|Bacteria,4NEFK@976|Bacteroidetes,2FR5W@200643|Bacteroidia,22XSW@171551|Porphyromonadaceae 976|Bacteroidetes U Major intrinsic protein glpF - - ko:K02440 - - - - ko00000,ko02000 1.A.8.1,1.A.8.2 - - MIP LIIFOLDO_02078 435591.BDI_1816 0.0 1023.0 COG0554@1|root,COG0554@2|Bacteria,4NFUH@976|Bacteroidetes,2G32Z@200643|Bacteroidia,22WN8@171551|Porphyromonadaceae 976|Bacteroidetes F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate glpK GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 ko:K00864 ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626 - R00847 RC00002,RC00017 ko00000,ko00001,ko01000,ko04147 - - - FGGY_C,FGGY_N LIIFOLDO_02079 435591.BDI_1817 0.0 1038.0 COG0578@1|root,COG0578@2|Bacteria,4NEYG@976|Bacteroidetes,2FN2W@200643|Bacteroidia,22X5P@171551|Porphyromonadaceae 976|Bacteroidetes C C-terminal domain of alpha-glycerophosphate oxidase glpA - 1.1.5.3 ko:K00111 ko00564,ko01110,map00564,map01110 - R00848 RC00029 ko00000,ko00001,ko01000 - - - DAO,DAO_C LIIFOLDO_02080 435591.BDI_0258 1.73e-102 296.0 2BZ8H@1|root,32R4H@2|Bacteria,4NRUQ@976|Bacteroidetes,2FTBX@200643|Bacteroidia,22Y57@171551|Porphyromonadaceae 976|Bacteroidetes S Family of unknown function (DUF695) - - - - - - - - - - - - DUF695 LIIFOLDO_02081 435591.BDI_0257 1.89e-115 330.0 COG1528@1|root,COG1528@2|Bacteria,4NGS7@976|Bacteroidetes,2FQD1@200643|Bacteroidia,22Y73@171551|Porphyromonadaceae 976|Bacteroidetes P Iron-storage protein ftnA - 1.16.3.2 ko:K02217 - - - - ko00000,ko01000 - - - Ferritin LIIFOLDO_02082 435591.BDI_0256 5.57e-118 337.0 COG0350@1|root,COG0350@2|Bacteria,4NFYC@976|Bacteroidetes,2FSA5@200643|Bacteroidia 976|Bacteroidetes H Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated ogt - 2.1.1.63 ko:K00567,ko:K10778 - - - - ko00000,ko01000,ko03000,ko03400 - - - DNA_binding_1,Methyltransf_1N LIIFOLDO_02084 435591.BDI_0245 5.49e-213 590.0 COG0385@1|root,COG0385@2|Bacteria,4NFWK@976|Bacteroidetes,2FM0C@200643|Bacteroidia,22WCQ@171551|Porphyromonadaceae 976|Bacteroidetes S Sodium bile acid symporter family - - - ko:K03453 - - - - ko00000 2.A.28 - - SBF LIIFOLDO_02085 435591.BDI_0244 0.0 1756.0 COG0383@1|root,COG0383@2|Bacteria,4NIM9@976|Bacteroidetes,2G37Q@200643|Bacteroidia,22XJX@171551|Porphyromonadaceae 976|Bacteroidetes G Alpha mannosidase middle domain - - 3.2.1.24 ko:K01191 ko00511,map00511 - - - ko00000,ko00001,ko01000,ko04131 - GH38 - Alpha-mann_mid,Glyco_hydro_38,Glyco_hydro_38C LIIFOLDO_02086 435591.BDI_0243 0.0 925.0 COG2755@1|root,COG2755@2|Bacteria,4NMUB@976|Bacteroidetes,2FQW2@200643|Bacteroidia 2|Bacteria E GDSL-like Lipase/Acylhydrolase - - - - - - - - - - - - Lipase_GDSL_2 LIIFOLDO_02087 435591.BDI_0242 0.0 1018.0 COG0702@1|root,COG0702@2|Bacteria,4NH54@976|Bacteroidetes,2FNBB@200643|Bacteroidia,23037@171551|Porphyromonadaceae 976|Bacteroidetes GM Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_02088 435591.BDI_0241 0.0 2112.0 COG1629@1|root,COG4206@1|root,COG1629@2|Bacteria,COG4206@2|Bacteria,4PHWM@976|Bacteroidetes,2FX6N@200643|Bacteroidia,22Z4Q@171551|Porphyromonadaceae 976|Bacteroidetes H TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_02089 435591.BDI_0240 8.8e-244 670.0 COG3712@1|root,COG3712@2|Bacteria,4NKN5@976|Bacteroidetes,2FP6E@200643|Bacteroidia,230DS@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR LIIFOLDO_02090 435591.BDI_0239 3.21e-123 352.0 COG1595@1|root,COG1595@2|Bacteria,4NS12@976|Bacteroidetes,2FQ76@200643|Bacteroidia,22Y3I@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 LIIFOLDO_02091 435591.BDI_0238 0.0 1333.0 COG0363@1|root,COG2120@1|root,COG0363@2|Bacteria,COG2120@2|Bacteria,4NDUN@976|Bacteroidetes,2FM2W@200643|Bacteroidia,22WHT@171551|Porphyromonadaceae 976|Bacteroidetes G glucosamine-6-phosphate deaminase nagB - 3.5.99.6 ko:K02564 ko00520,ko01100,map00520,map01100 - R00765 RC00163 ko00000,ko00001,ko01000 - - - Glucosamine_iso,PIG-L LIIFOLDO_02092 435591.BDI_0237 4.69e-282 770.0 COG1820@1|root,COG1820@2|Bacteria,4NJ35@976|Bacteroidetes,2FMRP@200643|Bacteroidia,22XJK@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the metallo-dependent hydrolases superfamily. NagA family - - 3.5.1.25 ko:K01443 ko00520,ko01130,map00520,map01130 - R02059 RC00166,RC00300 ko00000,ko00001,ko01000 - - - Amidohydro_1 LIIFOLDO_02093 435591.BDI_0236 4.59e-281 768.0 COG1820@1|root,COG1820@2|Bacteria,4NK7A@976|Bacteroidetes,2G337@200643|Bacteroidia,231ZU@171551|Porphyromonadaceae 976|Bacteroidetes G Amidohydrolase family - - 3.5.1.25 ko:K01443 ko00520,ko01130,map00520,map01130 - R02059 RC00166,RC00300 ko00000,ko00001,ko01000 - - - Amidohydro_1 LIIFOLDO_02094 435591.BDI_0235 0.0 1190.0 COG0488@1|root,COG0488@2|Bacteria,4NG1W@976|Bacteroidetes,2FMY5@200643|Bacteroidia,22W6R@171551|Porphyromonadaceae 976|Bacteroidetes S glycosyl transferase family 2 - - - ko:K06158 - - - - ko00000,ko03012 - - - ABC_tran,ABC_tran_CTD,ABC_tran_Xtn LIIFOLDO_02095 435591.BDI_0234 8.63e-226 622.0 COG1073@1|root,COG1073@2|Bacteria,4NFRN@976|Bacteroidetes,2FP0D@200643|Bacteroidia,22WD5@171551|Porphyromonadaceae 976|Bacteroidetes S Serine aminopeptidase, S33 - - - ko:K06889 - - - - ko00000 - - - Hydrolase_4 LIIFOLDO_02096 435591.BDI_0233 0.0 1069.0 COG1435@1|root,COG1435@2|Bacteria,4NFWU@976|Bacteroidetes,2FNY3@200643|Bacteroidia,22XJ7@171551|Porphyromonadaceae 976|Bacteroidetes F SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_02097 435591.BDI_0232 0.0 1100.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FW4E@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec LIIFOLDO_02098 435591.BDI_0616 0.0 2188.0 COG1197@1|root,COG1197@2|Bacteria,4NEPA@976|Bacteroidetes,2FP1Q@200643|Bacteroidia,22WFM@171551|Porphyromonadaceae 976|Bacteroidetes L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site mfd - - ko:K03723 ko03420,map03420 - - - ko00000,ko00001,ko01000,ko03400 - - - CarD_CdnL_TRCF,DEAD,Helicase_C,TRCF LIIFOLDO_02099 435591.BDI_0615 0.0 1245.0 COG1022@1|root,COG1022@2|Bacteria,4NEA4@976|Bacteroidetes,2FNK9@200643|Bacteroidia,22XGE@171551|Porphyromonadaceae 976|Bacteroidetes I AMP-binding enzyme - - 6.2.1.3 ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 M00086 R01280 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 4.C.1.1 - - AMP-binding LIIFOLDO_02102 435591.BDI_0612 2.71e-171 480.0 2B69Q@1|root,31Z76@2|Bacteria,4P4FW@976|Bacteroidetes,2FTT6@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_02103 435591.BDI_0611 0.0 1717.0 COG4775@1|root,COG4775@2|Bacteria,4NDYT@976|Bacteroidetes,2FMTK@200643|Bacteroidia,22WRF@171551|Porphyromonadaceae 976|Bacteroidetes M CarboxypepD_reg-like domain - - - - - - - - - - - - CarbopepD_reg_2 LIIFOLDO_02104 435591.BDI_0610 5e-292 799.0 COG1757@1|root,COG1757@2|Bacteria,4NFF8@976|Bacteroidetes,2FMFY@200643|Bacteroidia,22X08@171551|Porphyromonadaceae 976|Bacteroidetes C Na H antiporter mleN - - ko:K03315 - - - - ko00000,ko02000 2.A.35 - - Na_H_antiporter LIIFOLDO_02105 435591.BDI_0609 1.29e-208 578.0 2AHY8@1|root,318BB@2|Bacteria,4NNZG@976|Bacteroidetes,2FUWT@200643|Bacteroidia,230YX@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_02106 435591.BDI_0608 8.33e-122 348.0 COG4739@1|root,COG4739@2|Bacteria,4NPX4@976|Bacteroidetes,2FM7U@200643|Bacteroidia,22Y20@171551|Porphyromonadaceae 976|Bacteroidetes S Uncharacterized protein containing a ferredoxin domain (DUF2148) - - - - - - - - - - - - DUF2148 LIIFOLDO_02107 435591.BDI_0607 0.0 1397.0 COG1509@1|root,COG1509@2|Bacteria,4NK6C@976|Bacteroidetes,2FMW5@200643|Bacteroidia,22X48@171551|Porphyromonadaceae 976|Bacteroidetes E KamA family eam - 5.4.3.2 ko:K01843 ko00310,map00310 - R00461 RC00303 ko00000,ko00001,ko01000 - - - - LIIFOLDO_02108 435591.BDI_0606 4.99e-88 258.0 COG0745@1|root,COG0745@2|Bacteria,4P6A7@976|Bacteroidetes,2FSRM@200643|Bacteroidia 976|Bacteroidetes T Response regulator receiver domain divK - - - - - - - - - - - Response_reg LIIFOLDO_02109 435591.BDI_0605 0.0 1245.0 COG4206@1|root,COG4206@2|Bacteria,4NHH8@976|Bacteroidetes,2FM70@200643|Bacteroidia,22W28@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - Plug,TonB_dep_Rec LIIFOLDO_02110 435591.BDI_0604 2.98e-90 264.0 COG0864@1|root,COG0864@2|Bacteria,4NTBC@976|Bacteroidetes 976|Bacteroidetes K transcriptional regulator - - - ko:K07722 - - - - ko00000,ko03000 - - - NikR_C,RHH_1 LIIFOLDO_02111 435591.BDI_0603 0.0 1112.0 COG4198@1|root,COG4198@2|Bacteria,4NI11@976|Bacteroidetes,2FN1W@200643|Bacteroidia,22XHV@171551|Porphyromonadaceae 976|Bacteroidetes S Susd and RagB outer membrane lipoprotein - - - - - - - - - - - - SusD-like LIIFOLDO_02112 435591.BDI_0602 0.0 2167.0 COG1629@1|root,COG4773@1|root,COG1629@2|Bacteria,COG4773@2|Bacteria,4PKAS@976|Bacteroidetes,2FWM7@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_02113 435591.BDI_0601 6.36e-180 501.0 COG1409@1|root,COG1409@2|Bacteria,4NRDF@976|Bacteroidetes,2FT5D@200643|Bacteroidia 976|Bacteroidetes S Calcineurin-like phosphoesterase superfamily domain - - 3.1.3.16 ko:K21814 - - - - ko00000,ko01000,ko01009 - - - Metallophos LIIFOLDO_02114 435591.BDI_3587 5.25e-175 487.0 COG2220@1|root,COG2220@2|Bacteria,4NHYV@976|Bacteroidetes,2FPWS@200643|Bacteroidia,22WWH@171551|Porphyromonadaceae 976|Bacteroidetes S Beta-lactamase superfamily domain - - - - - - - - - - - - Lactamase_B_3 LIIFOLDO_02115 435591.BDI_3586 0.0 1255.0 COG0446@1|root,COG0446@2|Bacteria,4NE3A@976|Bacteroidetes,2FRH5@200643|Bacteroidia,22WU3@171551|Porphyromonadaceae 976|Bacteroidetes S Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_02116 435591.BDI_3585 0.0 2264.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia,22XE6@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_02117 435591.BDI_3584 0.0 2297.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia,22XE6@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_02118 435591.BDI_3583 0.0 1267.0 COG0446@1|root,COG0446@2|Bacteria,4NE3A@976|Bacteroidetes,2FRH5@200643|Bacteroidia,22WU3@171551|Porphyromonadaceae 976|Bacteroidetes S Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_02119 435591.BDI_3582 0.0 1156.0 28KYZ@1|root,2ZAEB@2|Bacteria,4NHBZ@976|Bacteroidetes,2FP4X@200643|Bacteroidia 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - - LIIFOLDO_02120 435591.BDI_3581 0.0 996.0 COG0823@1|root,COG0823@2|Bacteria,4NGH4@976|Bacteroidetes,2FN8G@200643|Bacteroidia 976|Bacteroidetes U WD40-like Beta Propeller Repeat - - - - - - - - - - - - PD40 LIIFOLDO_02121 435591.BDI_3580 0.0 1152.0 28KYZ@1|root,2ZAEB@2|Bacteria,4NHBZ@976|Bacteroidetes,2FP4X@200643|Bacteroidia 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - - LIIFOLDO_02122 435591.BDI_3579 0.0 1016.0 COG0823@1|root,COG0823@2|Bacteria,4NGH4@976|Bacteroidetes,2FN8G@200643|Bacteroidia 976|Bacteroidetes U WD40-like Beta Propeller Repeat - - - - - - - - - - - - PD40 LIIFOLDO_02123 435591.BDI_3578 2.95e-283 774.0 COG0027@1|root,COG0027@2|Bacteria,4PKAW@976|Bacteroidetes,2FMB2@200643|Bacteroidia,22XEZ@171551|Porphyromonadaceae 976|Bacteroidetes F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate purT - 2.1.2.2 ko:K08289 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 M00048 R04325,R04326 RC00026,RC00197,RC01128 ko00000,ko00001,ko00002,ko01000 - - - ATP-grasp,Epimerase LIIFOLDO_02124 435591.BDI_3577 1.61e-156 439.0 COG1136@1|root,COG1136@2|Bacteria,4NE5N@976|Bacteroidetes,2FNRG@200643|Bacteroidia,22VW5@171551|Porphyromonadaceae 976|Bacteroidetes V ABC transporter, ATP-binding protein - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran LIIFOLDO_02125 435591.BDI_3576 1.8e-307 838.0 COG0577@1|root,COG0577@2|Bacteria,4NEBD@976|Bacteroidetes,2FNZ2@200643|Bacteroidia,22WQ3@171551|Porphyromonadaceae 976|Bacteroidetes V ABC transporter permease - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD LIIFOLDO_02126 203275.BFO_0462 3.11e-224 627.0 COG0577@1|root,COG0577@2|Bacteria,4NFUG@976|Bacteroidetes,2FM5B@200643|Bacteroidia,22X15@171551|Porphyromonadaceae 976|Bacteroidetes V ABC transporter, permease protein - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD LIIFOLDO_02127 435591.BDI_3573 7.34e-251 690.0 COG0845@1|root,COG0845@2|Bacteria,4NFT4@976|Bacteroidetes,2FPA0@200643|Bacteroidia,22VXS@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K02005 - - - - ko00000 - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23,OEP LIIFOLDO_02128 435591.BDI_3572 2.06e-297 815.0 COG1538@1|root,COG1538@2|Bacteria,4NEEN@976|Bacteroidetes,2FM98@200643|Bacteroidia,22WWD@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 M00325,M00326,M00339,M00571,M00575,M00646,M00647,M00696,M00697,M00709,M00720,M00821 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 1.B.17,2.A.6.2 - - OEP LIIFOLDO_02130 435591.BDI_2445 9.09e-100 292.0 2C0BR@1|root,302EW@2|Bacteria,4P9SR@976|Bacteroidetes,2FQUQ@200643|Bacteroidia 976|Bacteroidetes S Protein of unknown function (DUF4255) - - - - - - - - - - - - DUF4255 LIIFOLDO_02132 1346330.M472_13920 2.88e-196 562.0 COG3497@1|root,COG3497@2|Bacteria,4NEKK@976|Bacteroidetes,1IQN8@117747|Sphingobacteriia 976|Bacteroidetes S Phage tail sheath C-terminal domain - - - ko:K06907 - - - - ko00000 - - - Phage_sheath_1,Phage_sheath_1C LIIFOLDO_02133 435591.BDI_2448 2.44e-104 301.0 2B9U6@1|root,32372@2|Bacteria,4PPY5@976|Bacteroidetes,2G1AD@200643|Bacteroidia,230MB@171551|Porphyromonadaceae 976|Bacteroidetes S T4-like virus tail tube protein gp19 - - - - - - - - - - - - Phage_T4_gp19 LIIFOLDO_02134 435591.BDI_2449 2.26e-115 330.0 2DMQT@1|root,32T2H@2|Bacteria,4NN19@976|Bacteroidetes 976|Bacteroidetes S PFAM T4-like virus tail tube protein gp19 - - - - - - - - - - - - Phage_T4_gp19 LIIFOLDO_02136 435591.BDI_2450 2.61e-155 436.0 COG1652@1|root,COG1652@2|Bacteria,4NJV3@976|Bacteroidetes 976|Bacteroidetes S LysM domain - - - - - - - - - - - - - LIIFOLDO_02137 435591.BDI_2451 0.0 1023.0 COG3501@1|root,COG3501@2|Bacteria,4NFPB@976|Bacteroidetes,2FPUE@200643|Bacteroidia,22Z68@171551|Porphyromonadaceae 976|Bacteroidetes S Phage late control gene D protein (GPD) - - - - - - - - - - - - Phage_GPD LIIFOLDO_02138 435591.BDI_2452 2.86e-93 272.0 COG3628@1|root,COG3628@2|Bacteria,4NSKN@976|Bacteroidetes,2FSRN@200643|Bacteroidia,2311Y@171551|Porphyromonadaceae 976|Bacteroidetes S Gene 25-like lysozyme - - - ko:K06903 - - - - ko00000 - - - GPW_gp25 LIIFOLDO_02139 1235803.C825_04705 6.37e-10 68.2 COG3299@1|root,COG3299@2|Bacteria,4NF69@976|Bacteroidetes,2FN8K@200643|Bacteroidia,230XK@171551|Porphyromonadaceae 976|Bacteroidetes S homolog of phage Mu protein gp47 - - - - - - - - - - - - Baseplate_J LIIFOLDO_02140 435591.BDI_2454 0.0 1396.0 COG3299@1|root,COG3299@2|Bacteria,4NF69@976|Bacteroidetes,2FN8K@200643|Bacteroidia,230XK@171551|Porphyromonadaceae 976|Bacteroidetes S homolog of phage Mu protein gp47 - - - - - - - - - - - - Baseplate_J LIIFOLDO_02141 435591.BDI_2458 6.27e-215 601.0 COG0464@1|root,COG0464@2|Bacteria,4NFWG@976|Bacteroidetes,2FR01@200643|Bacteroidia,22Z78@171551|Porphyromonadaceae 976|Bacteroidetes O ATPase family associated with various cellular activities (AAA) - - - - - - - - - - - - AAA LIIFOLDO_02142 435591.BDI_2459 1.24e-75 231.0 COG1652@1|root,COG1652@2|Bacteria 2|Bacteria S positive regulation of growth rate - - - - - - - - - - - - DUF4157,LysM,PG_binding_1 LIIFOLDO_02143 435591.BDI_2462 0.0 903.0 COG2133@1|root,COG2133@2|Bacteria,4PMXZ@976|Bacteroidetes,2G0K9@200643|Bacteroidia,2324V@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080 LIIFOLDO_02144 435591.BDI_2463 0.0 1929.0 COG1434@1|root,COG1434@2|Bacteria,4NE96@976|Bacteroidetes,2FR8X@200643|Bacteroidia,22ZBD@171551|Porphyromonadaceae 976|Bacteroidetes S NPCBM/NEW2 domain - - - - - - - - - - - - NPCBM LIIFOLDO_02145 435591.BDI_2464 1.6e-64 199.0 2EGII@1|root,33AAP@2|Bacteria,4NXMZ@976|Bacteroidetes,2FVPI@200643|Bacteroidia,2314H@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - DUF4890 LIIFOLDO_02146 435591.BDI_2465 1.24e-304 828.0 COG4030@1|root,COG4030@2|Bacteria,4NHV9@976|Bacteroidetes,2FNZY@200643|Bacteroidia,22ZS8@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF2961) - - - - - - - - - - - - DUF2961 LIIFOLDO_02147 435591.BDI_2466 0.0 984.0 COG2730@1|root,COG2730@2|Bacteria,4NF3J@976|Bacteroidetes,2FMU6@200643|Bacteroidia,22XBB@171551|Porphyromonadaceae 976|Bacteroidetes G Putative collagen-binding domain of a collagenase - - - - - - - - - - - - Collagen_bind_2,DUF4038 LIIFOLDO_02148 435591.BDI_2467 0.0 889.0 COG5434@1|root,COG5434@2|Bacteria,4NFSC@976|Bacteroidetes,2FNQN@200643|Bacteroidia 976|Bacteroidetes G Belongs to the glycosyl hydrolase 28 family - - - - - - - - - - - - Glyco_hydro_28,Pectate_lyase_3 LIIFOLDO_02149 435591.BDI_2468 0.0 1078.0 COG0446@1|root,COG0446@2|Bacteria 2|Bacteria Q pyridine nucleotide-disulphide oxidoreductase - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_02150 435591.BDI_2469 0.0 2150.0 COG1629@1|root,COG4206@1|root,COG1629@2|Bacteria,COG4206@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_02151 435591.BDI_1150 8.72e-58 179.0 COG0776@1|root,COG0776@2|Bacteria 2|Bacteria L regulation of translation - - - ko:K03530 - - - - ko00000,ko03032,ko03036,ko03400 - - - Bac_DNA_binding LIIFOLDO_02152 435591.BDI_1149 2.07e-200 555.0 2EZ6Z@1|root,33SCY@2|Bacteria,4P10J@976|Bacteroidetes,2FNYE@200643|Bacteroidia,230MS@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG24904 non supervised orthologous group - - - - - - - - - - - - - LIIFOLDO_02153 435591.BDI_1148 3.36e-247 678.0 COG0812@1|root,COG0812@2|Bacteria,4NE78@976|Bacteroidetes,2FN91@200643|Bacteroidia,22X7N@171551|Porphyromonadaceae 976|Bacteroidetes M Cell wall formation murB - 1.3.1.98 ko:K00075 ko00520,ko00550,ko01100,map00520,map00550,map01100 - R03191,R03192 RC02639 ko00000,ko00001,ko01000,ko01011 - - - FAD_binding_4,MurB_C LIIFOLDO_02154 435591.BDI_1147 2.72e-187 519.0 COG1235@1|root,COG1235@2|Bacteria,4NDWB@976|Bacteroidetes,2FN0W@200643|Bacteroidia,22W69@171551|Porphyromonadaceae 976|Bacteroidetes S Metallo-beta-lactamase superfamily lipB - 3.1.4.55 ko:K06167 ko00440,map00440 - R10205 RC00296 ko00000,ko00001,ko01000 - - - Lactamase_B_2 LIIFOLDO_02155 435591.BDI_1146 0.0 1515.0 COG1596@1|root,COG1596@2|Bacteria,4NEXJ@976|Bacteroidetes,2FM4E@200643|Bacteroidia,22WXT@171551|Porphyromonadaceae 976|Bacteroidetes M Polysaccharide biosynthesis/export protein kpsD - - - - - - - - - - - Caps_synth_GfcC,Poly_export,SLBB LIIFOLDO_02156 435591.BDI_1145 2.88e-250 688.0 COG3765@1|root,COG3765@2|Bacteria,4P36E@976|Bacteroidetes,2G0AE@200643|Bacteroidia,22X5N@171551|Porphyromonadaceae 976|Bacteroidetes M Chain length determinant protein - - - - - - - - - - - - GNVR,Wzz LIIFOLDO_02158 435591.BDI_1143 2.61e-161 451.0 COG0177@1|root,COG0177@2|Bacteria,4NFF3@976|Bacteroidetes,2FM8U@200643|Bacteroidia,22WI0@171551|Porphyromonadaceae 976|Bacteroidetes L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate nth - 4.2.99.18 ko:K10773 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - EndIII_4Fe-2S,HhH-GPD LIIFOLDO_02159 435591.BDI_1142 0.0 1714.0 COG3525@1|root,COG3525@2|Bacteria,4NHNU@976|Bacteroidetes,2FMM8@200643|Bacteroidia,22X64@171551|Porphyromonadaceae 976|Bacteroidetes G beta-N-acetylglucosaminidase - GO:0003674,GO:0003824,GO:0004553,GO:0004563,GO:0005488,GO:0005515,GO:0005975,GO:0006464,GO:0006517,GO:0006807,GO:0008150,GO:0008152,GO:0009100,GO:0009987,GO:0015929,GO:0016231,GO:0016787,GO:0016798,GO:0019538,GO:0036211,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901135,GO:1901564 3.2.1.35 ko:K01197 ko00531,ko01100,map00531,map01100 M00076,M00077 R07824,R07825,R10905 - ko00000,ko00001,ko00002,ko00536,ko00537,ko01000,ko02042 - - - F5_F8_type_C,Glyco_hydro_20b,NAGidase LIIFOLDO_02160 435591.BDI_1141 0.0 1022.0 COG1305@1|root,COG1305@2|Bacteria,4NIJF@976|Bacteroidetes,2FQJU@200643|Bacteroidia,22XJ6@171551|Porphyromonadaceae 976|Bacteroidetes E Domain of Unknown Function with PDB structure (DUF3858) - - - - - - - - - - - - DUF3857,DUF3858,Transglut_core LIIFOLDO_02161 435591.BDI_1140 0.0 1325.0 COG1305@1|root,COG1305@2|Bacteria,4NI6P@976|Bacteroidetes,2FPYJ@200643|Bacteroidia,22XFT@171551|Porphyromonadaceae 976|Bacteroidetes E Domain of Unknown Function with PDB structure (DUF3857) - - - - - - - - - - - - DUF3857,DUF3858,Transglut_core LIIFOLDO_02162 435591.BDI_1139 9.36e-254 696.0 COG0318@1|root,COG0318@2|Bacteria,4NEXK@976|Bacteroidetes,2FM16@200643|Bacteroidia,22X5D@171551|Porphyromonadaceae 976|Bacteroidetes IQ O-succinylbenzoic acid--CoA ligase menE - 6.2.1.26 ko:K01911 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R04030 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000 - - - AMP-binding,AMP-binding_C LIIFOLDO_02163 435591.BDI_1138 1.69e-259 710.0 COG4948@1|root,COG4948@2|Bacteria,4NEBX@976|Bacteroidetes,2FMXR@200643|Bacteroidia,22X1A@171551|Porphyromonadaceae 976|Bacteroidetes M Mandelate racemase muconate lactonizing enzyme menC - - - - - - - - - - - MR_MLE_C LIIFOLDO_02164 435591.BDI_1137 7.22e-199 550.0 COG0447@1|root,COG0447@2|Bacteria,4NDXT@976|Bacteroidetes,2FMME@200643|Bacteroidia,22VYD@171551|Porphyromonadaceae 976|Bacteroidetes H Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) menB - 4.1.3.36 ko:K01661 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R07263 RC01923 ko00000,ko00001,ko00002,ko01000 - - - ECH_1 LIIFOLDO_02165 435591.BDI_1136 0.0 1137.0 COG1165@1|root,COG1165@2|Bacteria,4NETZ@976|Bacteroidetes,2FMSK@200643|Bacteroidia,22W02@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) menD - 2.2.1.9 ko:K02551 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R08165 RC02186 ko00000,ko00001,ko00002,ko01000 - - - TPP_enzyme_C,TPP_enzyme_M_2,TPP_enzyme_N LIIFOLDO_02166 435591.BDI_1135 2.98e-271 741.0 COG1169@1|root,COG1169@2|Bacteria,4NF6U@976|Bacteroidetes,2FNBU@200643|Bacteroidia,22XSX@171551|Porphyromonadaceae 976|Bacteroidetes HQ Isochorismate synthase entC - 5.4.4.2 ko:K02361,ko:K02552 ko00130,ko01053,ko01100,ko01110,ko01130,map00130,map01053,map01100,map01110,map01130 M00116 R01717 RC00588 ko00000,ko00001,ko00002,ko01000 - - - Chorismate_bind LIIFOLDO_02167 435591.BDI_1134 1.68e-293 801.0 COG0561@1|root,COG2050@1|root,COG0561@2|Bacteria,COG2050@2|Bacteria,4NNYG@976|Bacteroidetes,2FPKD@200643|Bacteroidia,22XIM@171551|Porphyromonadaceae 976|Bacteroidetes Q Thioesterase superfamily ydiI - 3.1.2.28 ko:K19222 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R07262 RC00004,RC00174 ko00000,ko00001,ko00002,ko01000 - - - 4HBT,Hydrolase_3 LIIFOLDO_02168 435591.BDI_1133 7.76e-191 530.0 COG0561@1|root,COG0561@2|Bacteria,4NHJG@976|Bacteroidetes,2G397@200643|Bacteroidia,22Y46@171551|Porphyromonadaceae 976|Bacteroidetes S Sucrose-6F-phosphate phosphohydrolase - - - - - - - - - - - - Hydrolase_3 LIIFOLDO_02169 435591.BDI_1132 0.0 1248.0 COG0507@1|root,COG1112@1|root,COG0507@2|Bacteria,COG1112@2|Bacteria,4NEK7@976|Bacteroidetes,2FM7P@200643|Bacteroidia,22WIF@171551|Porphyromonadaceae 976|Bacteroidetes L AAA domain - - - - - - - - - - - - AAA_11,AAA_12 LIIFOLDO_02170 435591.BDI_1131 1.72e-82 244.0 COG2198@1|root,COG2198@2|Bacteria 2|Bacteria T Histidine kinase - - - - - - - - - - - - Hpt LIIFOLDO_02172 435591.BDI_1114 3.5e-95 278.0 COG3093@1|root,COG3093@2|Bacteria,4NSDG@976|Bacteroidetes,2FSS7@200643|Bacteroidia,22YQ7@171551|Porphyromonadaceae 976|Bacteroidetes K Helix-turn-helix XRE-family like proteins - - - - - - - - - - - - HTH_3,Phage_CI_repr LIIFOLDO_02173 435591.BDI_1113 5.71e-194 537.0 COG0543@1|root,COG0543@2|Bacteria,4NE35@976|Bacteroidetes,2FN69@200643|Bacteroidia,22WHB@171551|Porphyromonadaceae 976|Bacteroidetes C Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( pyrK - - ko:K02823 ko00240,ko01100,map00240,map01100 - - - ko00000,ko00001 - - - DHODB_Fe-S_bind,FAD_binding_6,NAD_binding_1 LIIFOLDO_02174 435591.BDI_1112 1.27e-219 605.0 COG0167@1|root,COG0167@2|Bacteria,4NDVB@976|Bacteroidetes,2FPMW@200643|Bacteroidia,22XED@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily pyrD GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.98.1 ko:K00226,ko:K17828 ko00240,ko01100,map00240,map01100 M00051 R01867,R01869 RC00051 ko00000,ko00001,ko00002,ko01000 - - - DHO_dh LIIFOLDO_02175 1121097.JCM15093_983 2.25e-227 635.0 COG3458@1|root,COG3458@2|Bacteria,4NGH5@976|Bacteroidetes,2FMD6@200643|Bacteroidia,4AMCT@815|Bacteroidaceae 976|Bacteroidetes Q COG3458 Acetyl esterase (deacetylase) - - - - - - - - - - - - AXE1,Glyco_hydro_26 LIIFOLDO_02177 1077285.AGDG01000038_gene3825 3.23e-23 89.4 COG0788@1|root,COG0788@2|Bacteria,4NEGJ@976|Bacteroidetes,2FN3H@200643|Bacteroidia,4AMUY@815|Bacteroidaceae 976|Bacteroidetes F Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) purU - 3.5.1.10 ko:K01433 ko00630,ko00670,map00630,map00670 - R00944 RC00026,RC00111 ko00000,ko00001,ko01000 - - - ACT,Formyl_trans_N LIIFOLDO_02178 1236514.BAKL01000003_gene454 2.06e-115 334.0 COG0788@1|root,COG0788@2|Bacteria,4NEGJ@976|Bacteroidetes,2FN3H@200643|Bacteroidia,4AMUY@815|Bacteroidaceae 976|Bacteroidetes F Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) purU - 3.5.1.10 ko:K01433 ko00630,ko00670,map00630,map00670 - R00944 RC00026,RC00111 ko00000,ko00001,ko01000 - - - ACT,Formyl_trans_N LIIFOLDO_02179 435591.BDI_1111 3.18e-183 510.0 COG0708@1|root,COG0708@2|Bacteria,4NEY3@976|Bacteroidetes,2FNRH@200643|Bacteroidia,22VZU@171551|Porphyromonadaceae 976|Bacteroidetes L exodeoxyribonuclease III xth - 3.1.11.2 ko:K01142 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - Exo_endo_phos LIIFOLDO_02180 1235803.C825_04849 3.8e-112 342.0 COG3391@1|root,COG3391@2|Bacteria,4NVA3@976|Bacteroidetes,2FMCK@200643|Bacteroidia,22Z24@171551|Porphyromonadaceae 976|Bacteroidetes S 6-bladed beta-propeller - - - - - - - - - - - - DUF4934,DUF5128 LIIFOLDO_02181 1122931.AUAE01000005_gene3475 2.47e-152 434.0 COG0330@1|root,COG0330@2|Bacteria,4NH8V@976|Bacteroidetes,2FQPC@200643|Bacteroidia,22Z0Q@171551|Porphyromonadaceae 976|Bacteroidetes O SPFH Band 7 PHB domain protein - - - - - - - - - - - - Band_7 LIIFOLDO_02182 1235803.C825_02668 2.76e-59 186.0 COG1725@1|root,COG1725@2|Bacteria,4PKHR@976|Bacteroidetes,2G09Z@200643|Bacteroidia,2313V@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix gluconate operon transcriptional repressor - - - - - - - - - - - - GntR,Peripla_BP_3 LIIFOLDO_02183 435591.BDI_1110 3.11e-155 437.0 COG1285@1|root,COG1285@2|Bacteria,4NRHK@976|Bacteroidetes,2G370@200643|Bacteroidia,22Y5I@171551|Porphyromonadaceae 976|Bacteroidetes S MgtC family - - - ko:K07507 - - - - ko00000,ko02000 9.B.20 - - MgtC LIIFOLDO_02184 435591.BDI_1109 2.5e-109 314.0 COG1433@1|root,COG1433@2|Bacteria,4NRPC@976|Bacteroidetes,2FPSP@200643|Bacteroidia,22Y9G@171551|Porphyromonadaceae 976|Bacteroidetes S Putative redox-active protein (C_GCAxxG_C_C) - - - - - - - - - - - - C_GCAxxG_C_C LIIFOLDO_02185 435591.BDI_1108 1.44e-66 202.0 COG4627@1|root,COG4627@2|Bacteria,4PMJM@976|Bacteroidetes,2G0DP@200643|Bacteroidia,231CI@171551|Porphyromonadaceae 976|Bacteroidetes S Stress responsive A/B Barrel Domain - - - - - - - - - - - - Dabb LIIFOLDO_02186 435591.BDI_1107 2.66e-289 790.0 COG0560@1|root,COG3830@1|root,COG0560@2|Bacteria,COG3830@2|Bacteria,4NHAG@976|Bacteroidetes,2FNI5@200643|Bacteroidia,22XCU@171551|Porphyromonadaceae 976|Bacteroidetes ET phosphoserine phosphatase serB - 3.1.3.3 ko:K01079 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 M00020 R00582 RC00017 ko00000,ko00001,ko00002,ko01000,ko01009 - - - ACT_6,Glycos_transf_2,HAD LIIFOLDO_02187 435591.BDI_1106 6.33e-141 398.0 2BZE3@1|root,33WNC@2|Bacteria,4P35P@976|Bacteroidetes,2FPVE@200643|Bacteroidia 976|Bacteroidetes S COG NOG28134 non supervised orthologous group - - - - - - - - - - - - - LIIFOLDO_02188 435591.BDI_1105 0.0 1521.0 COG1629@1|root,COG4771@2|Bacteria,4NENA@976|Bacteroidetes,2G3G3@200643|Bacteroidia,231IN@171551|Porphyromonadaceae 976|Bacteroidetes P Psort location OuterMembrane, score 9.52 - - - - - - - - - - - - CarbopepD_reg_2,OMP_b-brl_3 LIIFOLDO_02190 435591.BDI_1103 1.26e-79 236.0 COG1725@1|root,COG1725@2|Bacteria,4NT1X@976|Bacteroidetes,2FTX9@200643|Bacteroidia,22YHZ@171551|Porphyromonadaceae 976|Bacteroidetes K Transcriptional regulator - - - - - - - - - - - - GntR LIIFOLDO_02192 435591.BDI_1101 6.61e-191 530.0 COG1131@1|root,COG1131@2|Bacteria,4NFRV@976|Bacteroidetes,2FPD8@200643|Bacteroidia,22XU2@171551|Porphyromonadaceae 976|Bacteroidetes V ABC transporter, ATP-binding protein cbiO - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran LIIFOLDO_02193 435591.BDI_1100 6.74e-112 322.0 COG0450@1|root,COG0450@2|Bacteria,4NS8B@976|Bacteroidetes,2FPJE@200643|Bacteroidia,22YH1@171551|Porphyromonadaceae 976|Bacteroidetes O Thioredoxin-like - - - - - - - - - - - - AhpC-TSA,Redoxin,Thioredoxin_8 LIIFOLDO_02194 435591.BDI_1099 1.02e-165 462.0 2CKZE@1|root,339Y5@2|Bacteria,4NZJ4@976|Bacteroidetes,2FSVD@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_02195 435591.BDI_1098 0.0 917.0 COG0006@1|root,COG0006@2|Bacteria,4NG40@976|Bacteroidetes,2FMSQ@200643|Bacteroidia,22WVB@171551|Porphyromonadaceae 976|Bacteroidetes E Aminopeptidase P, N-terminal domain pepP - 3.4.11.9 ko:K01262 - - - - ko00000,ko01000,ko01002 - - - AMP_N,Peptidase_M24 LIIFOLDO_02196 435591.BDI_1097 2.64e-75 225.0 COG4109@1|root,COG4109@2|Bacteria,4NTDQ@976|Bacteroidetes,2FTXG@200643|Bacteroidia,22YTZ@171551|Porphyromonadaceae 976|Bacteroidetes K DRTGG domain - - - - - - - - - - - - DRTGG LIIFOLDO_02197 435591.BDI_1096 1.02e-94 276.0 COG2172@1|root,COG2172@2|Bacteria,4NRAS@976|Bacteroidetes,2FT57@200643|Bacteroidia,22YBD@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase-like ATPase domain - - - - - - - - - - - - HATPase_c,HATPase_c_2 LIIFOLDO_02198 435591.BDI_1095 0.0 897.0 COG2000@1|root,COG2221@1|root,COG4624@1|root,COG2000@2|Bacteria,COG2221@2|Bacteria,COG4624@2|Bacteria,4NJAS@976|Bacteroidetes,2FMHZ@200643|Bacteroidia,22WWW@171551|Porphyromonadaceae 976|Bacteroidetes C Iron only hydrogenase large subunit, C-terminal domain - - - - - - - - - - - - FeS,Fe_hyd_lg_C,Fer4,Fer4_6 LIIFOLDO_02199 435591.BDI_1094 3.2e-76 227.0 COG4109@1|root,COG4109@2|Bacteria,4NTA0@976|Bacteroidetes,2FTZ6@200643|Bacteroidia,22YI5@171551|Porphyromonadaceae 976|Bacteroidetes K DRTGG domain - - - - - - - - - - - - DRTGG LIIFOLDO_02200 435591.BDI_1093 3.16e-180 501.0 COG0613@1|root,COG0613@2|Bacteria,4PMUT@976|Bacteroidetes,2G0H4@200643|Bacteroidia,22Y1H@171551|Porphyromonadaceae 976|Bacteroidetes S DNA polymerase alpha chain like domain - - - - - - - - - - - - PHP LIIFOLDO_02201 435591.BDI_1092 1.15e-122 350.0 COG4585@1|root,COG4585@2|Bacteria,4PMUS@976|Bacteroidetes,2G0H3@200643|Bacteroidia,22Y87@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - - - - - - - - - - HATPase_c LIIFOLDO_02202 435591.BDI_0277 0.0 1828.0 COG2091@1|root,COG2091@2|Bacteria,4NFQ6@976|Bacteroidetes,2FS4M@200643|Bacteroidia,2309R@171551|Porphyromonadaceae 976|Bacteroidetes H lysine biosynthetic process via aminoadipic acid - - - - - - - - - - - - CBM9_1 LIIFOLDO_02203 435591.BDI_0276 0.0 938.0 COG1538@1|root,COG1538@2|Bacteria,4NDZK@976|Bacteroidetes,2FND5@200643|Bacteroidia,22W3J@171551|Porphyromonadaceae 976|Bacteroidetes MU Efflux transporter, outer membrane factor - - - - - - - - - - - - OEP LIIFOLDO_02204 435591.BDI_0275 0.0 1941.0 COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,2FM3B@200643|Bacteroidia,22WZM@171551|Porphyromonadaceae 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - ko:K03296 - - - - ko00000 2.A.6.2 - - ACR_tran,OEP LIIFOLDO_02205 435591.BDI_0274 1.46e-264 726.0 COG0845@1|root,COG0845@2|Bacteria,4NEXN@976|Bacteroidetes,2FRWB@200643|Bacteroidia,231FI@171551|Porphyromonadaceae 976|Bacteroidetes M Biotin-lipoyl like - - - ko:K03585 ko01501,ko01503,map01501,map01503 M00646,M00647,M00699,M00718 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 2.A.6.2,8.A.1.6 - - Biotin_lipoyl,Biotin_lipoyl_2,HlyD_3,HlyD_D23 LIIFOLDO_02207 435591.BDI_0272 5.23e-172 480.0 COG3142@1|root,COG3142@2|Bacteria,4NINY@976|Bacteroidetes,2FN71@200643|Bacteroidia,22XRN@171551|Porphyromonadaceae 976|Bacteroidetes P Participates in the control of copper homeostasis cutC - - ko:K06201 - - - - ko00000 - - - CutC LIIFOLDO_02208 435591.BDI_0271 0.0 978.0 COG0055@1|root,COG0055@2|Bacteria,4NF1Q@976|Bacteroidetes,2FP0J@200643|Bacteroidia,22W4U@171551|Porphyromonadaceae 976|Bacteroidetes C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits atpD - 3.6.3.14 ko:K02112 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194,ko01000 3.A.2.1 - - ATP-synt_ab,ATP-synt_ab_N LIIFOLDO_02209 435591.BDI_0270 2.14e-48 154.0 COG0355@1|root,COG0355@2|Bacteria,4NUYG@976|Bacteroidetes,2FUIM@200643|Bacteroidia,22YYA@171551|Porphyromonadaceae 976|Bacteroidetes C ATP synthase atpC - - ko:K02114 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194 3.A.2.1 - - ATP-synt_DE_N LIIFOLDO_02210 435591.BDI_0269 1.78e-89 263.0 2EK6R@1|root,33DX4@2|Bacteria,4NY14@976|Bacteroidetes,2FVRA@200643|Bacteroidia,22YXH@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location CytoplasmicMembrane, score - - - - - - - - - - - - - LIIFOLDO_02211 435591.BDI_0268 1.96e-254 697.0 COG0356@1|root,COG0356@2|Bacteria,4NEPK@976|Bacteroidetes,2FNAB@200643|Bacteroidia,22VYZ@171551|Porphyromonadaceae 976|Bacteroidetes C it plays a direct role in the translocation of protons across the membrane atpB - - ko:K02108 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194,ko03110 3.A.2.1 - - ATP-synt_A LIIFOLDO_02212 435591.BDI_0267 4.08e-29 106.0 COG0636@1|root,COG0636@2|Bacteria,4NURW@976|Bacteroidetes,2FTSZ@200643|Bacteroidia,22YE5@171551|Porphyromonadaceae 976|Bacteroidetes C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation atpE GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - ko:K02110 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194 3.A.2.1 - - ATP-synt_C LIIFOLDO_02213 435591.BDI_0266 6.52e-64 200.0 COG0711@1|root,COG0711@2|Bacteria,4NQKA@976|Bacteroidetes,2FQWH@200643|Bacteroidia,22Y51@171551|Porphyromonadaceae 976|Bacteroidetes C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) atpF - - ko:K02109 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194 3.A.2.1 - - ATP-synt_B LIIFOLDO_02214 435591.BDI_0265 7.13e-123 350.0 COG0712@1|root,COG0712@2|Bacteria,4NSNF@976|Bacteroidetes,2FQZ5@200643|Bacteroidia,22YFG@171551|Porphyromonadaceae 976|Bacteroidetes C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation atpH - - ko:K02113 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194 3.A.2.1 - - OSCP LIIFOLDO_02215 435591.BDI_0264 0.0 1015.0 COG0056@1|root,COG0056@2|Bacteria,4NFZW@976|Bacteroidetes,2FM4H@200643|Bacteroidia,22WEQ@171551|Porphyromonadaceae 976|Bacteroidetes C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit atpA - 3.6.3.14 ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194,ko01000 3.A.2.1 - - ATP-synt_ab,ATP-synt_ab_C,ATP-synt_ab_N LIIFOLDO_02216 435591.BDI_0263 3.28e-197 547.0 COG0224@1|root,COG0224@2|Bacteria,4NECM@976|Bacteroidetes,2FP5N@200643|Bacteroidia,22WNB@171551|Porphyromonadaceae 976|Bacteroidetes C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex atpG - - ko:K02115 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194 3.A.2.1 - - ATP-synt LIIFOLDO_02217 435591.BDI_0262 1.79e-218 604.0 COG0697@1|root,COG0697@2|Bacteria,4NGZ3@976|Bacteroidetes,2FP7S@200643|Bacteroidia,22XCP@171551|Porphyromonadaceae 976|Bacteroidetes EG membrane - - - - - - - - - - - - EamA LIIFOLDO_02218 435591.BDI_0261 0.0 1560.0 COG0460@1|root,COG0527@1|root,COG0460@2|Bacteria,COG0527@2|Bacteria,4NFGR@976|Bacteroidetes,2FMDB@200643|Bacteroidia,22VVG@171551|Porphyromonadaceae 976|Bacteroidetes E homoserine dehydrogenase thrA - 1.1.1.3,2.7.2.4 ko:K12524 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00017,M00018,M00526,M00527 R00480,R01773,R01775 RC00002,RC00043,RC00087 ko00000,ko00001,ko00002,ko01000 - - - AA_kinase,ACT,ACT_7,Homoserine_dh,NAD_binding_3 LIIFOLDO_02219 435591.BDI_0260 5.41e-295 804.0 COG3635@1|root,COG3635@2|Bacteria,4NH0F@976|Bacteroidetes,2FMC7@200643|Bacteroidia,22W6J@171551|Porphyromonadaceae 976|Bacteroidetes G 2,3-bisphosphoglycerate-independent phosphoglycerate mutase - - 5.4.2.12 ko:K15635 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003 R01518 RC00536 ko00000,ko00001,ko00002,ko01000 - - - Metalloenzyme,PhosphMutase LIIFOLDO_02220 435591.BDI_0259 0.0 868.0 COG0498@1|root,COG0498@2|Bacteria,4NEAA@976|Bacteroidetes,2FMPH@200643|Bacteroidia,22VYQ@171551|Porphyromonadaceae 976|Bacteroidetes E Threonine synthase N terminus thrC - 4.2.3.1 ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 M00018 R01466,R05086 RC00017,RC00526 ko00000,ko00001,ko00002,ko01000 - - - PALP,Thr_synth_N LIIFOLDO_02221 435591.BDI_1074 0.0 1499.0 COG1048@1|root,COG1048@2|Bacteria,4NDZT@976|Bacteroidetes,2FMDQ@200643|Bacteroidia,22XBN@171551|Porphyromonadaceae 976|Bacteroidetes C aconitate hydratase acnA - 4.2.1.3 ko:K01681 ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00009,M00010,M00012,M00173,M00740 R01324,R01325,R01900 RC00497,RC00498,RC00618 br01601,ko00000,ko00001,ko00002,ko01000 - - - Aconitase,Aconitase_C LIIFOLDO_02222 435591.BDI_1075 6.27e-308 839.0 COG0538@1|root,COG0538@2|Bacteria,4PKW6@976|Bacteroidetes,2FKYF@200643|Bacteroidia,22WNM@171551|Porphyromonadaceae 976|Bacteroidetes C Isocitrate/isopropylmalate dehydrogenase icd - 1.1.1.42 ko:K00031 ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146 M00009,M00010,M00173,M00740 R00267,R00268,R01899 RC00001,RC00084,RC00114,RC00626,RC02801 br01601,ko00000,ko00001,ko00002,ko01000 - - - Iso_dh LIIFOLDO_02223 435591.BDI_1076 0.0 879.0 COG0372@1|root,COG0372@2|Bacteria,4NFXK@976|Bacteroidetes,2FPF3@200643|Bacteroidia,22VZ6@171551|Porphyromonadaceae 976|Bacteroidetes C Citrate synthase, C-terminal domain prpC - 2.3.3.1,2.3.3.5 ko:K01647,ko:K01659 ko00020,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00640,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00009,M00010,M00012,M00740 R00351,R00931 RC00004,RC00067,RC00406,RC02827 br01601,ko00000,ko00001,ko00002,ko01000 - - - Citrate_synt LIIFOLDO_02224 435591.BDI_1077 3.04e-57 177.0 COG1359@1|root,COG1359@2|Bacteria,4NUHJ@976|Bacteroidetes,2FT37@200643|Bacteroidia,22YRR@171551|Porphyromonadaceae 976|Bacteroidetes S Antibiotic biosynthesis monooxygenase ycnE - - - - - - - - - - - ABM LIIFOLDO_02225 435591.BDI_1078 1.11e-84 249.0 COG2246@1|root,COG2246@2|Bacteria,4NVF9@976|Bacteroidetes,2FSJT@200643|Bacteroidia,231R3@171551|Porphyromonadaceae 976|Bacteroidetes S GtrA-like protein - - - - - - - - - - - - GtrA LIIFOLDO_02226 435591.BDI_1079 0.0 1081.0 COG0531@1|root,COG0531@2|Bacteria,4NDU2@976|Bacteroidetes,2FPUV@200643|Bacteroidia,22WHW@171551|Porphyromonadaceae 976|Bacteroidetes E C-terminus of AA_permease - - - ko:K03294 - - - - ko00000 2.A.3.2 - - AA_permease,AA_permease_2 LIIFOLDO_02227 435591.BDI_1080 7.37e-80 236.0 2DMZP@1|root,32UMQ@2|Bacteria,4P3H1@976|Bacteroidetes,2FT4E@200643|Bacteroidia,230IW@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3795) - - - - - - - - - - - - DUF3795 LIIFOLDO_02228 435591.BDI_1081 6.36e-173 482.0 COG0300@1|root,COG0300@2|Bacteria,4NDXD@976|Bacteroidetes,2FPEA@200643|Bacteroidia,22W7Y@171551|Porphyromonadaceae 976|Bacteroidetes S Enoyl-(Acyl carrier protein) reductase - - - - - - - - - - - - adh_short LIIFOLDO_02229 435591.BDI_1082 7.77e-282 769.0 COG3274@1|root,COG3274@2|Bacteria,4NP3U@976|Bacteroidetes,2FN6D@200643|Bacteroidia,22XW5@171551|Porphyromonadaceae 976|Bacteroidetes S Acyltransferase family - - - - - - - - - - - - Acyl_transf_3 LIIFOLDO_02230 435591.BDI_1083 0.0 905.0 COG0624@1|root,COG0624@2|Bacteria,4NFGE@976|Bacteroidetes,2FN9J@200643|Bacteroidia,22WCD@171551|Porphyromonadaceae 976|Bacteroidetes E peptidase dapE - - - - - - - - - - - M20_dimer,Peptidase_M20 LIIFOLDO_02231 435591.BDI_1084 2.66e-310 844.0 COG0402@1|root,COG0402@2|Bacteria,4NHV6@976|Bacteroidetes,2FQSE@200643|Bacteroidia,22XCF@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine mtaD - 3.5.4.28,3.5.4.31 ko:K12960 ko00270,ko01100,map00270,map01100 - R09660 RC00477 ko00000,ko00001,ko01000 - - - Amidohydro_1 LIIFOLDO_02232 435591.BDI_1085 1.15e-195 542.0 COG0005@1|root,COG0005@2|Bacteria,4NE4J@976|Bacteroidetes,2FM1B@200643|Bacteroidia,22X9V@171551|Porphyromonadaceae 976|Bacteroidetes F The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate xapA - 2.4.2.1 ko:K03783 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 - R01561,R01863,R01969,R02147,R02294,R02295,R02297,R02484,R02557,R02748,R08368,R10244 RC00033,RC00063,RC00122 ko00000,ko00001,ko01000 - - - PNP_UDP_1 LIIFOLDO_02236 435591.BDI_1089 0.0 1602.0 COG0542@1|root,COG0542@2|Bacteria,4NE1J@976|Bacteroidetes,2FNNW@200643|Bacteroidia,22VW7@171551|Porphyromonadaceae 976|Bacteroidetes O Belongs to the ClpA ClpB family clpC - - ko:K03696 ko01100,map01100 - - - ko00000,ko03110 - - - AAA,AAA_2,ClpB_D2-small,Clp_N,UVR LIIFOLDO_02237 435591.BDI_1090 0.0 1622.0 COG0188@1|root,COG0188@2|Bacteria,4NDWQ@976|Bacteroidetes,2FMCP@200643|Bacteroidia,22WV3@171551|Porphyromonadaceae 976|Bacteroidetes L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner gyrA - 5.99.1.3 ko:K02469 - - - - ko00000,ko01000,ko03032,ko03400 - - - DNA_gyraseA_C,DNA_topoisoIV LIIFOLDO_02238 435591.BDI_1091 4.24e-289 790.0 COG0457@1|root,COG0457@2|Bacteria,4NIY9@976|Bacteroidetes,2FP2Z@200643|Bacteroidia,22WMV@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat protein - - - - - - - - - - - - TPR_11,TPR_16,TPR_8 LIIFOLDO_02243 435591.BDI_2404 2.72e-102 296.0 COG0801@1|root,COG0801@2|Bacteria,4NGE8@976|Bacteroidetes,2FSKM@200643|Bacteroidia,22Y7A@171551|Porphyromonadaceae 976|Bacteroidetes H 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase folK - 2.7.6.3 ko:K00950 ko00790,ko01100,map00790,map01100 M00126,M00841 R03503 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - HPPK,dNK LIIFOLDO_02244 435591.BDI_2405 6.11e-256 701.0 COG0809@1|root,COG0809@2|Bacteria,4NF2T@976|Bacteroidetes,2FMFT@200643|Bacteroidia,22WR2@171551|Porphyromonadaceae 976|Bacteroidetes J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) queA - 2.4.99.17 ko:K07568 - - - - ko00000,ko01000,ko03016 - - - Queuosine_synth LIIFOLDO_02245 435591.BDI_2406 3.96e-163 457.0 COG0130@1|root,COG0130@2|Bacteria,4NESK@976|Bacteroidetes,2FMTY@200643|Bacteroidia,22X2S@171551|Porphyromonadaceae 976|Bacteroidetes J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs truB GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 ko:K03177 - - - - ko00000,ko01000,ko03016 - - - TruB_C_2,TruB_N LIIFOLDO_02246 435591.BDI_2407 3.96e-183 510.0 COG1968@1|root,COG1968@2|Bacteria,4NGIZ@976|Bacteroidetes,2FMST@200643|Bacteroidia,22X3R@171551|Porphyromonadaceae 976|Bacteroidetes V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin uppP - 3.6.1.27 ko:K06153 ko00550,map00550 - R05627 RC00002 ko00000,ko00001,ko01000,ko01011 - - - BacA LIIFOLDO_02247 435591.BDI_2408 7.33e-50 158.0 2E6VD@1|root,331EZ@2|Bacteria,4NUSW@976|Bacteroidetes,2FTVZ@200643|Bacteroidia,22YMK@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3098) fjo13 - - - - - - - - - - - DUF3098 LIIFOLDO_02248 435591.BDI_2409 6.44e-186 519.0 COG2177@1|root,COG2177@2|Bacteria,4NH05@976|Bacteroidetes,2FM17@200643|Bacteroidia,22WWC@171551|Porphyromonadaceae 976|Bacteroidetes D Belongs to the ABC-4 integral membrane protein family. FtsX subfamily ftsX GO:0005575,GO:0005618,GO:0005623,GO:0006928,GO:0008150,GO:0009274,GO:0009276,GO:0009605,GO:0009607,GO:0009615,GO:0009987,GO:0030312,GO:0030313,GO:0031975,GO:0040011,GO:0043207,GO:0044464,GO:0048870,GO:0050896,GO:0051179,GO:0051301,GO:0051674,GO:0051704,GO:0051707,GO:0071944,GO:0071976 - ko:K09811 ko02010,map02010 M00256 - - ko00000,ko00001,ko00002,ko02000,ko03036 3.A.1.140 - - FtsX LIIFOLDO_02249 435591.BDI_2410 0.0 3305.0 COG5492@1|root,COG5492@2|Bacteria,4PKTM@976|Bacteroidetes,2G048@200643|Bacteroidia,22ZZ6@171551|Porphyromonadaceae 976|Bacteroidetes N Bacterial Ig-like domain 2 - - - - - - - - - - - - Big_2 LIIFOLDO_02250 1122931.AUAE01000011_gene1820 6.28e-89 327.0 COG3420@1|root,COG5492@1|root,COG3420@2|Bacteria,COG5492@2|Bacteria 2|Bacteria N domain, Protein - - - ko:K12287,ko:K20276 ko02024,map02024 - - - ko00000,ko00001,ko02044 - - - Beta_helix,Big_2,Big_5,DUF3494,Phage_TTP_1 LIIFOLDO_02251 435591.BDI_2412 0.0 2067.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia,22W07@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent receptor plug domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec LIIFOLDO_02252 435591.BDI_2413 0.0 1063.0 COG0702@1|root,COG0702@2|Bacteria,4PMY6@976|Bacteroidetes,2G0KE@200643|Bacteroidia 976|Bacteroidetes GM SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_02253 435591.BDI_2414 0.0 1107.0 COG3408@1|root,COG3408@2|Bacteria,4NHCI@976|Bacteroidetes,2FWPV@200643|Bacteroidia 976|Bacteroidetes G Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - - - - - - - - - - Bac_rhamnosid6H LIIFOLDO_02254 435591.BDI_2415 0.0 905.0 COG0621@1|root,COG0621@2|Bacteria,4NDU6@976|Bacteroidetes,2FNP7@200643|Bacteroidia,22W5Y@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine miaB - 2.8.4.3 ko:K06168 - - R10645,R10646,R10647 RC00003,RC00980,RC03221,RC03222 ko00000,ko01000,ko03016 - - - Radical_SAM,TRAM,UPF0004 LIIFOLDO_02255 435591.BDI_3967 7.7e-63 193.0 COG0360@1|root,COG0360@2|Bacteria,4NQ9W@976|Bacteroidetes,2FSHK@200643|Bacteroidia,22Y4M@171551|Porphyromonadaceae 976|Bacteroidetes J Binds together with S18 to 16S ribosomal RNA rpsF - - ko:K02990 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011,ko03029 - - - Ribosomal_S6 LIIFOLDO_02256 411477.PARMER_01319 1.44e-56 176.0 COG0238@1|root,COG0238@2|Bacteria,4NSAR@976|Bacteroidetes,2FT22@200643|Bacteroidia,22Y4P@171551|Porphyromonadaceae 976|Bacteroidetes J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit rpsR GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02963 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S18 LIIFOLDO_02257 435591.BDI_3969 4.72e-92 270.0 COG0359@1|root,COG0359@2|Bacteria,4NNRP@976|Bacteroidetes,2FSTU@200643|Bacteroidia,22XP0@171551|Porphyromonadaceae 976|Bacteroidetes J binds to the 23S rRNA rplI - - ko:K02939 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L9_C,Ribosomal_L9_N LIIFOLDO_02258 435591.BDI_3970 2.65e-259 712.0 COG0860@1|root,COG0860@2|Bacteria,4NGKC@976|Bacteroidetes,2FPGX@200643|Bacteroidia,22WFQ@171551|Porphyromonadaceae 976|Bacteroidetes M N-acetylmuramoyl-L-alanine amidase amiA - 3.5.1.28 ko:K01448 ko01503,map01503 M00727 R04112 RC00064,RC00141 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 - - - Amidase_3 LIIFOLDO_02259 435591.BDI_3971 7.5e-186 519.0 COG1463@1|root,COG1463@2|Bacteria,4NHT9@976|Bacteroidetes,2FPK9@200643|Bacteroidia,22X9M@171551|Porphyromonadaceae 976|Bacteroidetes Q Virulence factor Mce family protein - - - ko:K02067 ko02010,map02010 M00210,M00669,M00670 - - ko00000,ko00001,ko00002,ko02000 3.A.1.27 - - MlaD LIIFOLDO_02260 435591.BDI_0001 0.0 915.0 COG0593@1|root,COG0593@2|Bacteria,4NE6Q@976|Bacteroidetes,2FNPD@200643|Bacteroidia,22X3Z@171551|Porphyromonadaceae 976|Bacteroidetes L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids dnaA GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - ko:K02313 ko02020,ko04112,map02020,map04112 - - - ko00000,ko00001,ko03032,ko03036 - - - Bac_DnaA,Bac_DnaA_C,DnaA_N LIIFOLDO_02261 435591.BDI_0002 0.0 1719.0 COG0209@1|root,COG0209@2|Bacteria,4NEHQ@976|Bacteroidetes,2FN30@200643|Bacteroidia,22W6K@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen nrd - 1.17.4.1 ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 M00053 R02017,R02018,R02019,R02024 RC00613 ko00000,ko00001,ko00002,ko01000,ko03400 - - - Ribonuc_red_lgC,Ribonuc_red_lgN LIIFOLDO_02262 435591.BDI_0003 0.0 1872.0 COG1640@1|root,COG1640@2|Bacteria,4NF7Z@976|Bacteroidetes,2FMBZ@200643|Bacteroidia,22WJ2@171551|Porphyromonadaceae 976|Bacteroidetes G 4-alpha-glucanotransferase malQ - 2.4.1.25 ko:K00705 ko00500,ko01100,map00500,map01100 - R05196 RC00049 ko00000,ko00001,ko01000 - GH77 - CBM_20,Glyco_hydro_77 LIIFOLDO_02263 435591.BDI_0004 2.48e-57 180.0 COG1664@1|root,COG1664@2|Bacteria,4NUZA@976|Bacteroidetes,2FUPU@200643|Bacteroidia,22YMZ@171551|Porphyromonadaceae 976|Bacteroidetes M Integral membrane protein CcmA involved in cell shape determination - - - - - - - - - - - - Bactofilin LIIFOLDO_02264 435591.BDI_0005 2.65e-81 241.0 COG1539@1|root,COG1539@2|Bacteria,4NQ53@976|Bacteroidetes,2FSRG@200643|Bacteroidia,22YF6@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin folB - 1.13.11.81,4.1.2.25,5.1.99.8 ko:K01633 ko00790,ko01100,map00790,map01100 M00126,M00840 R03504,R11037,R11073 RC00721,RC00943,RC01479,RC03333,RC03334 ko00000,ko00001,ko00002,ko01000 - - - FolB LIIFOLDO_02265 435591.BDI_0006 0.0 867.0 COG1142@1|root,COG4624@1|root,COG1142@2|Bacteria,COG4624@2|Bacteria,4NGF4@976|Bacteroidetes,2FPND@200643|Bacteroidia,22WV7@171551|Porphyromonadaceae 976|Bacteroidetes C Hydrogenase - - - - - - - - - - - - Fe_hyd_lg_C,Fer4 LIIFOLDO_02266 435591.BDI_0007 3.25e-314 854.0 28HW2@1|root,2Z825@2|Bacteria,4NF6G@976|Bacteroidetes,2FMR4@200643|Bacteroidia,22X2Q@171551|Porphyromonadaceae 976|Bacteroidetes S Peptide-N-glycosidase F, N terminal - - - - - - - - - - - - N-glycanase_C,N-glycanase_N LIIFOLDO_02267 435591.BDI_0008 8.67e-143 404.0 COG2095@1|root,COG2095@2|Bacteria,4NIHF@976|Bacteroidetes,2FMIJ@200643|Bacteroidia,22XS3@171551|Porphyromonadaceae 976|Bacteroidetes U MarC family integral membrane protein - - - ko:K05595 - - - - ko00000,ko02000 2.A.95.1 - - MarC LIIFOLDO_02268 435591.BDI_0009 1.38e-51 165.0 COG3525@1|root,COG3525@2|Bacteria 435591.BDI_0009|- G beta-N-acetylhexosaminidase activity - - - - - - - - - - - - - LIIFOLDO_02269 435591.BDI_0010 1.14e-92 271.0 COG3525@1|root,COG3525@2|Bacteria 2|Bacteria G beta-N-acetylhexosaminidase activity - - 3.2.1.52 ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 M00079 R00022,R06004,R11316 RC00049 ko00000,ko00001,ko00002,ko01000,ko03110 - GH20 - F5_F8_type_C,Glyco_hydro_20,Glyco_hydro_20b,Laminin_G_3 LIIFOLDO_02270 435591.BDI_0011 7.15e-94 275.0 COG3292@1|root,COG3292@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y LIIFOLDO_02271 1235803.C825_03196 0.0 1059.0 COG0642@1|root,COG0745@1|root,COG2207@1|root,COG3292@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG2207@2|Bacteria,COG3292@2|Bacteria,4NITX@976|Bacteroidetes,2FM2F@200643|Bacteroidia 976|Bacteroidetes T COG COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain - - - - - - - - - - - - HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y LIIFOLDO_02272 435591.BDI_0013 1.8e-84 259.0 COG4974@1|root,COG4974@2|Bacteria,4P01T@976|Bacteroidetes,2FNQ0@200643|Bacteroidia,22WIY@171551|Porphyromonadaceae 976|Bacteroidetes L COG NOG11942 non supervised orthologous group - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase LIIFOLDO_02273 435591.BDI_0046 3.46e-242 665.0 COG1216@1|root,COG1216@2|Bacteria,4NFP0@976|Bacteroidetes,2FN97@200643|Bacteroidia,22WGJ@171551|Porphyromonadaceae 976|Bacteroidetes S glycosyl transferase family 2 - - - ko:K07011 - - - - ko00000 - - - Glycos_transf_2 LIIFOLDO_02274 435591.BDI_0047 2.36e-215 594.0 COG1560@1|root,COG1560@2|Bacteria,4NGQU@976|Bacteroidetes,2FPU3@200643|Bacteroidia,22WWZ@171551|Porphyromonadaceae 976|Bacteroidetes M Lipid A Biosynthesis waaM - 2.3.1.241 ko:K02517 ko00540,ko01100,map00540,map01100 M00060 R05146 RC00037,RC00039 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Lip_A_acyltrans LIIFOLDO_02275 435591.BDI_0048 0.0 877.0 COG0621@1|root,COG0621@2|Bacteria,4NE0R@976|Bacteroidetes,2FM1T@200643|Bacteroidia,22XEW@171551|Porphyromonadaceae 976|Bacteroidetes J Fe-S oxidoreductase yqeV - 2.8.4.5 ko:K18707 - - R10649 RC00003,RC03221 ko00000,ko01000,ko03016 - - - Radical_SAM,UPF0004 LIIFOLDO_02276 435591.BDI_0049 2.37e-211 585.0 COG3391@1|root,COG3391@2|Bacteria 2|Bacteria CO amine dehydrogenase activity - - - - - - - - - - - - DUF5128 LIIFOLDO_02277 435591.BDI_1048 0.0 918.0 COG1858@1|root,COG1858@2|Bacteria,4NE4P@976|Bacteroidetes,2FMPS@200643|Bacteroidia 976|Bacteroidetes C Psort location Periplasmic, score ccp - 1.11.1.5 ko:K00428 - - - - ko00000,ko01000 - - - CCP_MauG,Cytochrom_C,Haem_bd LIIFOLDO_02278 435591.BDI_1049 2.45e-109 314.0 COG0797@1|root,COG0797@2|Bacteria,4NSF1@976|Bacteroidetes,2FTUH@200643|Bacteroidia,230ZE@171551|Porphyromonadaceae 976|Bacteroidetes M Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides rlpA - - ko:K03642 - - - - ko00000 - - - DPBB_1 LIIFOLDO_02279 435591.BDI_1050 1.14e-229 631.0 COG0451@1|root,COG0451@2|Bacteria,4NEZX@976|Bacteroidetes,2FM8V@200643|Bacteroidia,22W0M@171551|Porphyromonadaceae 976|Bacteroidetes M GDP-mannose 4,6 dehydratase - - 4.1.1.35 ko:K08678 ko00520,ko01100,map00520,map01100 M00361 R01384 RC00508 ko00000,ko00001,ko00002,ko01000 - - - GDP_Man_Dehyd LIIFOLDO_02280 435591.BDI_1051 2.1e-287 786.0 COG1538@1|root,COG1538@2|Bacteria,4NHEA@976|Bacteroidetes,2FPVX@200643|Bacteroidia,22XTS@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein czcC - - ko:K15725 - - - - ko00000,ko02000 1.B.17.2.2 - - OEP LIIFOLDO_02281 435591.BDI_1052 3.37e-250 687.0 COG0845@1|root,COG0845@2|Bacteria,4NG8S@976|Bacteroidetes,2FPHW@200643|Bacteroidia,22XPC@171551|Porphyromonadaceae 976|Bacteroidetes M Barrel-sandwich domain of CusB or HlyD membrane-fusion czcB - - ko:K15727 - - - - ko00000,ko02000 8.A.1.2.1 - - HlyD_D23 LIIFOLDO_02282 435591.BDI_1053 0.0 1984.0 COG3696@1|root,COG3696@2|Bacteria,4P36A@976|Bacteroidetes,2FMH3@200643|Bacteroidia,22VYK@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family czcA_1 - - ko:K15726 - - - - ko00000,ko02000 2.A.6.1.2 - - ACR_tran LIIFOLDO_02283 435591.BDI_1054 3.04e-162 454.0 COG0745@1|root,COG0745@2|Bacteria,4NHXA@976|Bacteroidetes,2G2YZ@200643|Bacteroidia,22XSA@171551|Porphyromonadaceae 976|Bacteroidetes T Transcriptional regulatory protein, C terminal cusR - - ko:K07665 ko02020,map02020 M00452,M00745 - - ko00000,ko00001,ko00002,ko01504,ko02022 - - - Response_reg,Trans_reg_C LIIFOLDO_02284 435591.BDI_1055 3.77e-269 738.0 COG0642@1|root,COG0642@2|Bacteria,4PM6U@976|Bacteroidetes,2G0H6@200643|Bacteroidia,22XUP@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - HAMP,HATPase_c,HisKA LIIFOLDO_02285 435591.BDI_1056 0.0 1281.0 COG0744@1|root,COG0744@2|Bacteria,4NF58@976|Bacteroidetes,2G31J@200643|Bacteroidia 976|Bacteroidetes M Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors pbpF - - - - - - - - - - - Transgly LIIFOLDO_02286 435591.BDI_1057 1.07e-236 651.0 COG1052@1|root,COG1052@2|Bacteria,4NF1R@976|Bacteroidetes,2FMNY@200643|Bacteroidia,22WSN@171551|Porphyromonadaceae 976|Bacteroidetes CH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ldhA - 1.1.1.28 ko:K03778 ko00620,ko01120,map00620,map01120 - R00704 RC00044 ko00000,ko00001,ko01000 - - - 2-Hacid_dh,2-Hacid_dh_C LIIFOLDO_02287 435591.BDI_1058 4.54e-204 564.0 COG4667@1|root,COG4667@2|Bacteria,4NIX2@976|Bacteroidetes,2FM09@200643|Bacteroidia,22WX4@171551|Porphyromonadaceae 976|Bacteroidetes S Patatin-like phospholipase - - - - - - - - - - - - Patatin LIIFOLDO_02288 435591.BDI_1059 0.0 1158.0 COG0422@1|root,COG0422@2|Bacteria,4NFTF@976|Bacteroidetes,2FMBC@200643|Bacteroidia,22W6U@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction thiC GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 ko:K03147 ko00730,ko01100,map00730,map01100 M00127 R03472 RC03251,RC03252 ko00000,ko00001,ko00002,ko01000 - - - ThiC-associated,ThiC_Rad_SAM LIIFOLDO_02289 435591.BDI_1060 5.04e-174 485.0 COG0352@1|root,COG0352@2|Bacteria,4NNFB@976|Bacteroidetes,2FMPB@200643|Bacteroidia,22XMN@171551|Porphyromonadaceae 976|Bacteroidetes H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) thiE GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 ko:K00788 ko00730,ko01100,map00730,map01100 M00127 R03223,R10712 RC00224,RC03255,RC03397 ko00000,ko00001,ko00002,ko01000 - - - Phos_pyr_kin,TMP-TENI LIIFOLDO_02290 435591.BDI_1061 5.76e-140 395.0 COG0352@1|root,COG0352@2|Bacteria,4NRDR@976|Bacteroidetes,2FNNJ@200643|Bacteroidia,22Y4V@171551|Porphyromonadaceae 976|Bacteroidetes H Thiamine monophosphate synthase thiE - 2.5.1.3 ko:K00788 ko00730,ko01100,map00730,map01100 M00127 R03223,R10712 RC00224,RC03255,RC03397 ko00000,ko00001,ko00002,ko01000 - - - TMP-TENI LIIFOLDO_02291 435591.BDI_1062 2.39e-177 496.0 COG0351@1|root,COG0351@2|Bacteria,4NE0F@976|Bacteroidetes,2FNNE@200643|Bacteroidia,22XEP@171551|Porphyromonadaceae 976|Bacteroidetes H Phosphomethylpyrimidine kinase thiD - 2.7.1.49,2.7.4.7 ko:K00941 ko00730,ko01100,map00730,map01100 M00127 R03471,R04509 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - Phos_pyr_kin LIIFOLDO_02292 435591.BDI_1063 3.04e-307 835.0 COG4775@1|root,COG4775@2|Bacteria,4NICB@976|Bacteroidetes,2FP3X@200643|Bacteroidia,22YAP@171551|Porphyromonadaceae 976|Bacteroidetes M Surface antigen - - - - - - - - - - - - Bac_surface_Ag LIIFOLDO_02293 435591.BDI_1064 0.0 1212.0 COG1903@1|root,COG2099@1|root,COG1903@2|Bacteria,COG2099@2|Bacteria,4NE1Z@976|Bacteroidetes,2FMIX@200643|Bacteroidia,22WKH@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A cbiD - 2.1.1.195 ko:K02188 ko00860,ko01100,map00860,map01100 - R07773 RC00003,RC02051 ko00000,ko00001,ko01000 - - - CbiD,CbiJ LIIFOLDO_02294 435591.BDI_1065 0.0 1065.0 COG2073@1|root,COG2875@1|root,COG2073@2|Bacteria,COG2875@2|Bacteria,4PKDZ@976|Bacteroidetes,2FNMI@200643|Bacteroidia,22W86@171551|Porphyromonadaceae 976|Bacteroidetes H Cobalamin biosynthesis protein CbiG cobM - 2.1.1.133,2.1.1.271 ko:K05936 ko00860,ko01100,map00860,map01100 - R05181,R05810 RC00003,RC01294,RC02049 ko00000,ko00001,ko01000 - - - CbiG_C,CbiG_N,CbiG_mid,TP_methylase LIIFOLDO_02295 435591.BDI_2171 1.01e-122 350.0 COG0716@1|root,COG0716@2|Bacteria,4NF3U@976|Bacteroidetes,2FPR4@200643|Bacteroidia,22XQ8@171551|Porphyromonadaceae 976|Bacteroidetes C Flavodoxin - - - - - - - - - - - - Flavodoxin_4 LIIFOLDO_02296 435591.BDI_2172 5.85e-132 374.0 COG1853@1|root,COG1853@2|Bacteria,4PIRP@976|Bacteroidetes,2FPPV@200643|Bacteroidia 976|Bacteroidetes S Flavin reductase like domain - - - - - - - - - - - - Flavin_Reduct LIIFOLDO_02297 1268240.ATFI01000008_gene2568 2.06e-64 197.0 COG3620@1|root,COG3620@2|Bacteria,4NQII@976|Bacteroidetes,2FTN0@200643|Bacteroidia,4AVM4@815|Bacteroidaceae 976|Bacteroidetes K Helix-turn-helix domain - - - - - - - - - - - - HTH_3 LIIFOLDO_02298 435591.BDI_2173 4.03e-242 673.0 COG1090@1|root,COG3040@1|root,COG1090@2|Bacteria,COG3040@2|Bacteria,4NINM@976|Bacteroidetes,2FNWG@200643|Bacteroidia,22Y63@171551|Porphyromonadaceae 976|Bacteroidetes M Domain of unknown function (DUF1731) - - - ko:K07071 - - - - ko00000 - - - DUF1731,Epimerase,Lipocalin_2 LIIFOLDO_02299 435591.BDI_2174 1.49e-187 522.0 COG1028@1|root,COG1028@2|Bacteria,4NKYV@976|Bacteroidetes,2FNI3@200643|Bacteroidia,22Z6A@171551|Porphyromonadaceae 976|Bacteroidetes IQ Enoyl-(Acyl carrier protein) reductase - - - - - - - - - - - - adh_short_C2 LIIFOLDO_02300 435591.BDI_2175 8e-136 384.0 COG1670@1|root,COG1670@2|Bacteria,4PKFP@976|Bacteroidetes,2G3FG@200643|Bacteroidia 976|Bacteroidetes J Acetyltransferase, gnat family - - - ko:K03827 - - - - ko00000,ko01000 - - - Acetyltransf_3 LIIFOLDO_02301 435591.BDI_2176 3.28e-133 377.0 COG1670@1|root,COG1670@2|Bacteria,4NQB5@976|Bacteroidetes,2FTXH@200643|Bacteroidia,22Y31@171551|Porphyromonadaceae 976|Bacteroidetes J Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_10,Acetyltransf_3 LIIFOLDO_02302 435591.BDI_2177 7.2e-108 310.0 COG0454@1|root,COG0454@2|Bacteria,4NZ1X@976|Bacteroidetes,2FSZK@200643|Bacteroidia 976|Bacteroidetes K Acetyltransferase, gnat family - - - - - - - - - - - - Acetyltransf_10 LIIFOLDO_02303 435591.BDI_2178 3.74e-120 343.0 28PCM@1|root,2ZC4W@2|Bacteria,4NMCM@976|Bacteroidetes,2FNT0@200643|Bacteroidia,22XXQ@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - LIIFOLDO_02304 435591.BDI_2179 0.0 1078.0 COG3507@1|root,COG3507@2|Bacteria,4NJ7K@976|Bacteroidetes,2FPFY@200643|Bacteroidia,22XK4@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 43 - - - - - - - - - - - - Glyco_hydro_43 LIIFOLDO_02305 435591.BDI_2180 0.0 1064.0 COG0564@1|root,COG0564@2|Bacteria,4NE9B@976|Bacteroidetes,2FP72@200643|Bacteroidia,22ZHI@171551|Porphyromonadaceae 976|Bacteroidetes J RNA pseudouridylate synthase rluA - 5.4.99.28,5.4.99.29 ko:K06177 - - - - ko00000,ko01000,ko03009,ko03016 - - - PseudoU_synth_2 LIIFOLDO_02307 435591.BDI_2181 2.49e-47 150.0 2EPBT@1|root,33GYI@2|Bacteria,4NXI9@976|Bacteroidetes,2FUUR@200643|Bacteroidia,22YX2@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - LIIFOLDO_02308 435591.BDI_2182 0.0 874.0 COG0534@1|root,COG0534@2|Bacteria,4NH4G@976|Bacteroidetes,2FQ16@200643|Bacteroidia 976|Bacteroidetes V Psort location CytoplasmicMembrane, score 10.00 mepA_7 - - - - - - - - - - - MatE LIIFOLDO_02309 435591.BDI_2183 0.0 1572.0 COG3537@1|root,COG3537@2|Bacteria,4NDYB@976|Bacteroidetes,2FMXD@200643|Bacteroidia,22WT0@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 LIIFOLDO_02310 435591.BDI_2184 1.45e-106 311.0 COG0110@1|root,COG0110@2|Bacteria,4NENC@976|Bacteroidetes,2FP5Y@200643|Bacteroidia,22WU1@171551|Porphyromonadaceae 976|Bacteroidetes S Bacterial transferase hexapeptide repeat - - 2.3.1.201 ko:K13018 ko00520,map00520 - R10100 RC00004,RC00166 ko00000,ko00001,ko01000,ko01005 - - - Hexapep,Hexapep_2 LIIFOLDO_02311 435591.BDI_2185 3.41e-168 469.0 COG0313@1|root,COG0313@2|Bacteria,4NDXE@976|Bacteroidetes,2FN1A@200643|Bacteroidia,22WFR@171551|Porphyromonadaceae 976|Bacteroidetes H Methyltransferase rsmI_1 - 2.1.1.198 ko:K07056 - - - - ko00000,ko01000,ko03009 - - - TP_methylase LIIFOLDO_02312 435591.BDI_2186 0.0 937.0 COG0144@1|root,COG3270@1|root,COG0144@2|Bacteria,COG3270@2|Bacteria,4NEV7@976|Bacteroidetes,2FKZX@200643|Bacteroidia,22WT9@171551|Porphyromonadaceae 976|Bacteroidetes J NOL1 NOP2 sun family rsmF - - - - - - - - - - - Methyltr_RsmB-F,Methyltr_RsmF_N,Methyltranf_PUA LIIFOLDO_02313 435591.BDI_2187 1.79e-245 673.0 COG0322@1|root,COG0322@2|Bacteria,4NGEV@976|Bacteroidetes,2FNVF@200643|Bacteroidia,22XZM@171551|Porphyromonadaceae 976|Bacteroidetes L Domain of unknown function (DUF4837) - - - - - - - - - - - - DUF4837 LIIFOLDO_02314 411477.PARMER_03783 1.21e-52 176.0 COG0457@1|root,COG0457@2|Bacteria,4PIXP@976|Bacteroidetes,2FXS6@200643|Bacteroidia 976|Bacteroidetes S Tetratricopeptide repeat - - - - - - - - - - - - - LIIFOLDO_02315 435591.BDI_2189 0.0 1372.0 COG0855@1|root,COG0855@2|Bacteria,4NE3P@976|Bacteroidetes,2FM68@200643|Bacteroidia,22WZE@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) ppk - 2.7.4.1 ko:K00937 ko00190,ko03018,map00190,map03018 - - - ko00000,ko00001,ko01000,ko03019 - - - PP_kinase,PP_kinase_C,PP_kinase_N LIIFOLDO_02316 435591.BDI_2190 1e-122 349.0 COG0622@1|root,COG0622@2|Bacteria,4NM4G@976|Bacteroidetes,2FSMW@200643|Bacteroidia,22XUV@171551|Porphyromonadaceae 976|Bacteroidetes S Phosphoesterase - - - ko:K07095 - - - - ko00000 - - - Metallophos_2 LIIFOLDO_02317 435591.BDI_2191 8.07e-259 710.0 COG1443@1|root,COG1443@2|Bacteria,4NMW4@976|Bacteroidetes,2FPR6@200643|Bacteroidia,22Y56@171551|Porphyromonadaceae 976|Bacteroidetes I Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - - LIIFOLDO_02318 471870.BACINT_01873 3.07e-83 259.0 COG1216@1|root,COG1216@2|Bacteria,4NEJB@976|Bacteroidetes,2FMB7@200643|Bacteroidia,4AKPW@815|Bacteroidaceae 976|Bacteroidetes S Glycosyltransferase, group 2 family protein - - - ko:K07011 - - - - ko00000 - - - Glycos_transf_2 LIIFOLDO_02319 483216.BACEGG_01799 4.12e-126 360.0 COG0110@1|root,COG0110@2|Bacteria,4NMHW@976|Bacteroidetes,2FPDD@200643|Bacteroidia,4AMEE@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 9.26 - - - - - - - - - - - - Hexapep,Hexapep_2 LIIFOLDO_02320 763034.HMPREF9446_03593 2.69e-181 516.0 COG0438@1|root,COG0438@2|Bacteria,4NJDH@976|Bacteroidetes,2FQG3@200643|Bacteroidia,4AP90@815|Bacteroidaceae 976|Bacteroidetes M Glycosyl transferases group 1 - - - - - - - - - - - - Glyco_trans_1_4 LIIFOLDO_02321 435591.BDI_1281 1.2e-196 553.0 COG0438@1|root,COG0438@2|Bacteria,4NETA@976|Bacteroidetes,2FPWJ@200643|Bacteroidia 976|Bacteroidetes M Psort location Cytoplasmic, score - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 LIIFOLDO_02322 1235803.C825_04375 1.43e-173 498.0 COG1215@1|root,COG1215@2|Bacteria,4NEM5@976|Bacteroidetes,2FQ1S@200643|Bacteroidia,22ZCI@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyl transferase family group 2 - - - - - - - - - - - - Glyco_tranf_2_3,Glyco_trans_2_3 LIIFOLDO_02323 435591.BDI_1279 1.54e-164 481.0 COG3307@1|root,COG3307@2|Bacteria,4NGGY@976|Bacteroidetes,2FMWC@200643|Bacteroidia,22XX9@171551|Porphyromonadaceae 976|Bacteroidetes M O-antigen ligase like membrane protein - - - - - - - - - - - - Wzy_C LIIFOLDO_02324 1122931.AUAE01000003_gene397 4.87e-277 785.0 COG3206@1|root,COG3206@2|Bacteria,4NHKC@976|Bacteroidetes,2FP6S@200643|Bacteroidia,22X5Y@171551|Porphyromonadaceae 976|Bacteroidetes M COG NOG36677 non supervised orthologous group - - - - - - - - - - - - AAA_31,Wzz LIIFOLDO_02325 435591.BDI_1277 3.93e-134 385.0 COG1538@1|root,COG1538@2|Bacteria,4NSUX@976|Bacteroidetes,2FQ0K@200643|Bacteroidia,230N7@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - - - - - - - - - - OEP LIIFOLDO_02326 435591.BDI_1276 9.03e-277 757.0 COG2148@1|root,COG2148@2|Bacteria,4NHSV@976|Bacteroidetes,2FPVF@200643|Bacteroidia,22VXX@171551|Porphyromonadaceae 976|Bacteroidetes M Bacterial sugar transferase - - - - - - - - - - - - Bac_transf,Response_reg LIIFOLDO_02327 435591.BDI_1275 1.95e-78 233.0 COG0745@1|root,COG0745@2|Bacteria,4NSD3@976|Bacteroidetes,2FSRA@200643|Bacteroidia,22YRQ@171551|Porphyromonadaceae 976|Bacteroidetes T cheY-homologous receiver domain - - - - - - - - - - - - Response_reg LIIFOLDO_02328 435591.BDI_1274 0.0 1679.0 COG3534@1|root,COG3534@2|Bacteria,4NGKW@976|Bacteroidetes,2G37N@200643|Bacteroidia,22XEV@171551|Porphyromonadaceae 976|Bacteroidetes G Alpha-L-arabinofuranosidase C-terminal domain - - - - - - - - - - - - Alpha-L-AF_C,CBM_4_9,DUF1080 LIIFOLDO_02329 435591.BDI_1273 0.0 1038.0 COG0388@1|root,COG0388@2|Bacteria,4NEAQ@976|Bacteroidetes,2FNGK@200643|Bacteroidia,22WA7@171551|Porphyromonadaceae 976|Bacteroidetes S Carbon-nitrogen hydrolase ramA_2 - - - - - - - - - - - Acetyltransf_1,CN_hydrolase LIIFOLDO_02330 435591.BDI_1272 0.0 1580.0 COG3525@1|root,COG3525@2|Bacteria,4NE08@976|Bacteroidetes,2FNAR@200643|Bacteroidia,22WBH@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 20, catalytic domain - - 3.2.1.52 ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 M00079 R00022,R06004,R11316 RC00049 ko00000,ko00001,ko00002,ko01000,ko03110 - GH20 - CHB_HEX_C_1,Fn3_assoc,Glyco_hydro_20,Glyco_hydro_20b,PA14 LIIFOLDO_02331 435591.BDI_1271 1.09e-313 853.0 COG0112@1|root,COG0112@2|Bacteria,4NE30@976|Bacteroidetes,2FM07@200643|Bacteroidia,22WFH@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism glyA - 2.1.2.1 ko:K00600 ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523 M00140,M00141,M00346,M00532 R00945,R09099 RC00022,RC00112,RC01583,RC02958 ko00000,ko00001,ko00002,ko01000 - - - SHMT LIIFOLDO_02332 435591.BDI_1270 2.24e-160 448.0 COG1413@1|root,COG1413@2|Bacteria,4PMMF@976|Bacteroidetes,2G0K3@200643|Bacteroidia 976|Bacteroidetes C Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080 LIIFOLDO_02333 435591.BDI_1269 0.0 1118.0 COG0488@1|root,COG0488@2|Bacteria,4NES5@976|Bacteroidetes,2FNIS@200643|Bacteroidia,22X8D@171551|Porphyromonadaceae 976|Bacteroidetes S ATP-binding cassette protein, ChvD family - - - ko:K15738 - - - - ko00000,ko02000 3.A.1.120.6 - - ABC_tran,ABC_tran_Xtn LIIFOLDO_02334 435591.BDI_0526 7.92e-107 308.0 COG1595@1|root,COG1595@2|Bacteria,4NMM3@976|Bacteroidetes,2FNH5@200643|Bacteroidia,22XTV@171551|Porphyromonadaceae 976|Bacteroidetes K Belongs to the sigma-70 factor family. ECF subfamily - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 LIIFOLDO_02335 435591.BDI_0527 0.0 1116.0 COG1022@1|root,COG1022@2|Bacteria,4NGFQ@976|Bacteroidetes,2FN1X@200643|Bacteroidia,22WYK@171551|Porphyromonadaceae 976|Bacteroidetes I AMP-binding enzyme - - 6.2.1.3 ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 M00086 R01280 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 4.C.1.1 - - AMP-binding LIIFOLDO_02336 435591.BDI_0528 9.06e-189 524.0 COG0744@1|root,COG0744@2|Bacteria,4NF90@976|Bacteroidetes,2FN8I@200643|Bacteroidia,22WS1@171551|Porphyromonadaceae 976|Bacteroidetes M Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors mtgA - 2.4.1.129 ko:K03814 ko00550,map00550 - - - ko00000,ko00001,ko01000,ko01003,ko01011 - GT51 - Transgly LIIFOLDO_02337 435591.BDI_0529 3.71e-161 451.0 COG0321@1|root,COG0321@2|Bacteria,4NE14@976|Bacteroidetes,2FMSJ@200643|Bacteroidia,22XNX@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate lipB - 2.3.1.181 ko:K03801 ko00785,ko01100,map00785,map01100 - R07766,R07769 RC00039,RC00992,RC02867 ko00000,ko00001,ko01000 - - - BPL_LplA_LipB LIIFOLDO_02338 435591.BDI_0530 6.61e-229 629.0 COG0042@1|root,COG0042@2|Bacteria,4NFRH@976|Bacteroidetes,2FMTW@200643|Bacteroidia,22X5R@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines dus - - - - - - - - - - - Dus LIIFOLDO_02339 435591.BDI_0531 0.0 2922.0 COG2911@1|root,COG2911@2|Bacteria,4NF7F@976|Bacteroidetes,2FNBJ@200643|Bacteroidia,22VVM@171551|Porphyromonadaceae 976|Bacteroidetes S TamB, inner membrane protein subunit of TAM complex - - - - - - - - - - - - TamB LIIFOLDO_02340 435591.BDI_0532 8.86e-244 669.0 COG0533@1|root,COG0533@2|Bacteria,4NE8E@976|Bacteroidetes,2FKZ9@200643|Bacteroidia,22WKJ@171551|Porphyromonadaceae 976|Bacteroidetes O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction tsaD - 2.3.1.234 ko:K01409 - - R10648 RC00070,RC00416 ko00000,ko01000,ko03016 - - - Peptidase_M22 LIIFOLDO_02341 435591.BDI_0533 8.35e-121 345.0 COG1546@1|root,COG1546@2|Bacteria,4NDVV@976|Bacteroidetes,2FMFI@200643|Bacteroidia,22X5C@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the CinA family cinA - 3.5.1.42 ko:K03742,ko:K03743 ko00760,map00760 - R02322 RC00100 ko00000,ko00001,ko01000 - - - CinA,MoCF_biosynth LIIFOLDO_02342 435591.BDI_0534 0.0 1188.0 COG2755@1|root,COG2755@2|Bacteria,4NEAZ@976|Bacteroidetes,2FM11@200643|Bacteroidia,22YB8@171551|Porphyromonadaceae 976|Bacteroidetes E N-terminus of Esterase_SGNH_hydro-type - - - - - - - - - - - - GxDLY,Lipase_GDSL_2,Lipase_GDSL_3 LIIFOLDO_02343 435591.BDI_0535 0.0 1350.0 COG4948@1|root,COG4948@2|Bacteria,4PKP3@976|Bacteroidetes,2FMI4@200643|Bacteroidia,22W6G@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyl-hydrolase 97 C-terminal, oligomerisation - - 3.2.1.20 ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 - R00028,R00801,R00802,R06087,R06088 RC00028,RC00049,RC00077 ko00000,ko00001,ko01000 - GH31 - GH97_C,GH97_N,Glyco_hydro_97 LIIFOLDO_02344 435591.BDI_0536 6.28e-249 682.0 COG2972@1|root,COG2972@2|Bacteria,4NGQZ@976|Bacteroidetes,2FMGN@200643|Bacteroidia,22WQN@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase - - - - - - - - - - - - His_kinase LIIFOLDO_02345 435591.BDI_0537 1.87e-88 264.0 COG3279@1|root,COG3279@2|Bacteria,4NI3K@976|Bacteroidetes,2FMT1@200643|Bacteroidia,22WEI@171551|Porphyromonadaceae 976|Bacteroidetes KT LytTr DNA-binding domain - - - - - - - - - - - - LytTR,Response_reg LIIFOLDO_02346 435591.BDI_0537 1.83e-54 175.0 COG3279@1|root,COG3279@2|Bacteria,4NI3K@976|Bacteroidetes,2FMT1@200643|Bacteroidia,22WEI@171551|Porphyromonadaceae 976|Bacteroidetes KT LytTr DNA-binding domain - - - - - - - - - - - - LytTR,Response_reg LIIFOLDO_02347 435591.BDI_0538 1.45e-126 360.0 COG0791@1|root,COG0791@2|Bacteria,4NQSZ@976|Bacteroidetes,2FS8Y@200643|Bacteroidia,231MA@171551|Porphyromonadaceae 976|Bacteroidetes M NlpC/P60 family mepS - 3.4.17.13 ko:K13694 - - - - ko00000,ko01000,ko01002,ko01011 - - - NLPC_P60 LIIFOLDO_02348 435591.BDI_0539 6.49e-305 831.0 COG0172@1|root,COG0172@2|Bacteria,4NED6@976|Bacteroidetes,2FN99@200643|Bacteroidia,22WPD@171551|Porphyromonadaceae 976|Bacteroidetes J seryl-tRNA synthetase serS - 6.1.1.11 ko:K01875 ko00970,map00970 M00359,M00360 R03662,R08218 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Seryl_tRNA_N,tRNA-synt_2b LIIFOLDO_02349 435591.BDI_0540 5.13e-55 171.0 2ED2F@1|root,336ZC@2|Bacteria,4P5HV@976|Bacteroidetes,2FU1I@200643|Bacteroidia 976|Bacteroidetes S Protein of unknown function (DUF2442) - - - - - - - - - - - - DUF2442 LIIFOLDO_02350 435591.BDI_0541 0.0 1592.0 COG0425@1|root,COG0446@1|root,COG0607@1|root,COG2210@1|root,COG0425@2|Bacteria,COG0446@2|Bacteria,COG0607@2|Bacteria,COG2210@2|Bacteria,4PKEU@976|Bacteroidetes,2FKZ0@200643|Bacteroidia,22WZ3@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the sulfur carrier protein TusA family cdr - - - - - - - - - - - DrsE_2,Pyr_redox_2,Pyr_redox_dim,Rhodanese,TusA LIIFOLDO_02351 435591.BDI_0542 1e-80 239.0 COG1846@1|root,COG1846@2|Bacteria,4NU5Q@976|Bacteroidetes,2FTWZ@200643|Bacteroidia,22YFR@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix multiple antibiotic resistance protein - - - - - - - - - - - - HTH_27,MarR,MarR_2 LIIFOLDO_02352 435591.BDI_2563 1.83e-180 502.0 COG0340@1|root,COG0340@2|Bacteria,4NHCH@976|Bacteroidetes,2FMM7@200643|Bacteroidia,22XZH@171551|Porphyromonadaceae 976|Bacteroidetes H Biotin/lipoate A/B protein ligase family birA - 6.3.4.15 ko:K03524 ko00780,ko01100,map00780,map01100 - R01074,R05145 RC00043,RC00070,RC00096,RC02896 ko00000,ko00001,ko01000,ko03000 - - - BPL_LplA_LipB LIIFOLDO_02353 435591.BDI_2564 2.29e-85 251.0 COG2315@1|root,COG2315@2|Bacteria,4NS6J@976|Bacteroidetes,2FTTX@200643|Bacteroidia,22YG6@171551|Porphyromonadaceae 976|Bacteroidetes S YjbR - - - - - - - - - - - - YjbR LIIFOLDO_02354 435591.BDI_2565 1.38e-89 262.0 COG0792@1|root,COG0792@2|Bacteria,4NS7E@976|Bacteroidetes,2FSN9@200643|Bacteroidia,22YE3@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the UPF0102 family - - - ko:K07460 - - - - ko00000 - - - UPF0102 LIIFOLDO_02355 435591.BDI_2566 3.12e-47 153.0 2EP0Q@1|root,33GMJ@2|Bacteria,4NY4V@976|Bacteroidetes,2FTU4@200643|Bacteroidia,22YXW@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - LIIFOLDO_02356 435591.BDI_2567 4.77e-100 290.0 COG0590@1|root,COG0590@2|Bacteria,4NNJ2@976|Bacteroidetes,2FSMJ@200643|Bacteroidia,22XW1@171551|Porphyromonadaceae 976|Bacteroidetes FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) tadA - 3.5.4.33 ko:K11991 - - R10223 RC00477 ko00000,ko01000,ko03016 - - - MafB19-deam LIIFOLDO_02357 435591.BDI_2568 2.7e-33 117.0 2EIZ3@1|root,33CQB@2|Bacteria,4NZDB@976|Bacteroidetes,2FVSS@200643|Bacteroidia,22YZX@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4834) - - - - - - - - - - - - DUF4834 LIIFOLDO_02358 435591.BDI_2569 3.81e-160 449.0 COG1183@1|root,COG1183@2|Bacteria,4NNUZ@976|Bacteroidetes,2FPNM@200643|Bacteroidia,22XNC@171551|Porphyromonadaceae 976|Bacteroidetes I Belongs to the CDP-alcohol phosphatidyltransferase class-I family pssA - 2.7.8.8 ko:K17103 ko00260,ko00564,ko01100,ko01110,map00260,map00564,map01100,map01110 M00093 R01800 RC00002,RC00017,RC02795 ko00000,ko00001,ko00002,ko01000 - - - CDP-OH_P_transf LIIFOLDO_02359 435591.BDI_2570 1.02e-153 432.0 COG0688@1|root,COG0688@2|Bacteria,4NFU1@976|Bacteroidetes,2FMVT@200643|Bacteroidia,22W27@171551|Porphyromonadaceae 976|Bacteroidetes I Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) psd - 4.1.1.65 ko:K01613 ko00564,ko01100,ko01110,map00564,map01100,map01110 M00093 R02055 RC00299 ko00000,ko00001,ko00002,ko01000 - - - PS_Dcarbxylase LIIFOLDO_02360 435591.BDI_2571 0.0 2075.0 COG1074@1|root,COG1074@2|Bacteria,4NEX4@976|Bacteroidetes,2FMHG@200643|Bacteroidia,22W5V@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the helicase family. UvrD subfamily addA - - - - - - - - - - - Cas_Cas4,PDDEXK_1,UvrD-helicase,UvrD_C LIIFOLDO_02361 435591.BDI_2572 2.64e-75 225.0 COG0023@1|root,COG0023@2|Bacteria,4NS6M@976|Bacteroidetes,2FTIA@200643|Bacteroidia,22Y4X@171551|Porphyromonadaceae 976|Bacteroidetes J Translation initiation factor - - - ko:K03113 ko03013,map03013 - - - ko00000,ko00001,ko03012 - - - SUI1 LIIFOLDO_02362 435591.BDI_2573 0.0 1488.0 COG0642@1|root,COG2984@1|root,COG2205@2|Bacteria,COG2984@2|Bacteria,4NQWC@976|Bacteroidetes,2FRP5@200643|Bacteroidia,2301B@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - HATPase_c,HisKA,PAS_3 LIIFOLDO_02363 435591.BDI_2574 1.61e-112 323.0 COG0245@1|root,COG0245@2|Bacteria,4NP0N@976|Bacteroidetes,2FNVA@200643|Bacteroidia,22XNK@171551|Porphyromonadaceae 976|Bacteroidetes I Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) ispF - 4.6.1.12 ko:K01770 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05637 RC00002,RC01440 ko00000,ko00001,ko00002,ko01000 - - - YgbB LIIFOLDO_02364 435591.BDI_2575 1.04e-291 796.0 COG2067@1|root,COG2067@2|Bacteria,4NDZW@976|Bacteroidetes,2FPVJ@200643|Bacteroidia,22W00@171551|Porphyromonadaceae 976|Bacteroidetes I Psort location OuterMembrane, score porV - - - - - - - - - - - - LIIFOLDO_02365 435591.BDI_2576 0.0 2217.0 COG1572@1|root,COG1572@2|Bacteria,4NDY7@976|Bacteroidetes,2FMIV@200643|Bacteroidia,22WVT@171551|Porphyromonadaceae 976|Bacteroidetes S Peptidase family C25 porU - - - - - - - - - - - Peptidase_C25 LIIFOLDO_02366 435591.BDI_2577 1.78e-146 412.0 COG0179@1|root,COG0179@2|Bacteria,4NGCT@976|Bacteroidetes,2FPPX@200643|Bacteroidia,22W4P@171551|Porphyromonadaceae 976|Bacteroidetes Q 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase fahA - - - - - - - - - - - FAA_hydrolase LIIFOLDO_02367 435591.BDI_2578 1.06e-153 431.0 COG2344@1|root,COG2344@2|Bacteria,4NIIF@976|Bacteroidetes,2FKZF@200643|Bacteroidia,22WX5@171551|Porphyromonadaceae 976|Bacteroidetes K Modulates transcription in response to changes in cellular NADH NAD( ) redox state rex - - ko:K01926 - - - - ko00000,ko03000 - - - CoA_binding,Put_DNA-bind_N LIIFOLDO_02369 999419.HMPREF1077_01412 9.99e-77 236.0 COG5380@1|root,COG5380@2|Bacteria,4PMTN@976|Bacteroidetes,2G0FU@200643|Bacteroidia 976|Bacteroidetes O BRO family, N-terminal domain - - - - - - - - - - - - Bro-N LIIFOLDO_02370 999419.HMPREF1077_01412 5.05e-32 119.0 COG5380@1|root,COG5380@2|Bacteria,4PMTN@976|Bacteroidetes,2G0FU@200643|Bacteroidia 976|Bacteroidetes O BRO family, N-terminal domain - - - - - - - - - - - - Bro-N LIIFOLDO_02371 411477.PARMER_03272 0.0 1166.0 2DUTV@1|root,33S7W@2|Bacteria,4P1VI@976|Bacteroidetes,2FWJJ@200643|Bacteroidia,22ZT0@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_02372 483215.BACFIN_08616 1.41e-106 316.0 COG2207@1|root,COG2207@2|Bacteria,4P4BT@976|Bacteroidetes,2FRD3@200643|Bacteroidia,4AVJC@815|Bacteroidaceae 976|Bacteroidetes K Transcriptional regulator, AraC family - - - ko:K20968 ko02025,map02025 - - - ko00000,ko00001,ko03000 - - - HTH_18,HTH_AraC LIIFOLDO_02373 483215.BACFIN_08618 0.0 2136.0 2DK52@1|root,308JW@2|Bacteria,4NPDA@976|Bacteroidetes,2FRAW@200643|Bacteroidia,4APYN@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - Fib_succ_major,P_gingi_FimA LIIFOLDO_02374 483215.BACFIN_08619 9.02e-253 699.0 2A75P@1|root,30W1I@2|Bacteria,4P9ET@976|Bacteroidetes,2FUJA@200643|Bacteroidia,4ASXS@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_02375 483215.BACFIN_08620 1.57e-196 549.0 2DU32@1|root,33NRG@2|Bacteria,4NY6A@976|Bacteroidetes,2FRW1@200643|Bacteroidia,4ASHR@815|Bacteroidaceae 976|Bacteroidetes S Fimbrillin-A associated anchor proteins Mfa1 and Mfa2 - GO:0005575,GO:0005623,GO:0008150,GO:0009279,GO:0009297,GO:0009987,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030030,GO:0030031,GO:0030312,GO:0030313,GO:0031975,GO:0043711,GO:0044085,GO:0044462,GO:0044464,GO:0071840,GO:0071944 - - - - - - - - - - Mfa2 LIIFOLDO_02376 483215.BACFIN_08621 7.39e-231 651.0 2BA23@1|root,323FV@2|Bacteria,4PJ0P@976|Bacteroidetes,2FQI5@200643|Bacteroidia,4AVME@815|Bacteroidaceae 976|Bacteroidetes S Major fimbrial subunit protein type IV, Fimbrillin, C-terminal - - - - - - - - - - - - Fimbrillin_C LIIFOLDO_02377 411901.BACCAC_03815 8.02e-184 530.0 COG2885@1|root,COG2885@2|Bacteria,4P0PV@976|Bacteroidetes,2FPFV@200643|Bacteroidia,4APBE@815|Bacteroidaceae 976|Bacteroidetes M chlorophyll binding - - - - - - - - - - - - DUF3868,OmpA LIIFOLDO_02378 483215.BACFIN_08623 1.97e-122 351.0 COG2885@1|root,COG2885@2|Bacteria,4P2SV@976|Bacteroidetes,2FPJF@200643|Bacteroidia,4AQ1F@815|Bacteroidaceae 976|Bacteroidetes M Autotransporter beta-domain - - - - - - - - - - - - DUF3575 LIIFOLDO_02380 435591.BDI_3857 5.86e-145 416.0 COG2113@1|root,COG2113@2|Bacteria,4NNAN@976|Bacteroidetes,2FMEQ@200643|Bacteroidia,231XM@171551|Porphyromonadaceae 976|Bacteroidetes E Substrate binding domain of ABC-type glycine betaine transport system opuAC - - ko:K02002 ko02010,map02010 M00208 - - ko00000,ko00001,ko00002,ko02000 3.A.1.12 - - OpuAC LIIFOLDO_02381 1077285.AGDG01000040_gene182 3.86e-151 430.0 COG4176@1|root,COG4176@2|Bacteria,4NH0P@976|Bacteroidetes,2FP5Z@200643|Bacteroidia,4AN87@815|Bacteroidaceae 976|Bacteroidetes P glycine betaine transport system, permease opuAB - - ko:K02001 ko02010,map02010 M00208 - - ko00000,ko00001,ko00002,ko02000 3.A.1.12 - - BPD_transp_1 LIIFOLDO_02382 435591.BDI_3859 2.48e-231 644.0 COG0517@1|root,COG4175@1|root,COG0517@2|Bacteria,COG4175@2|Bacteria,4PM3T@976|Bacteroidetes,2FMA7@200643|Bacteroidia,22Y6H@171551|Porphyromonadaceae 976|Bacteroidetes E Domain in cystathionine beta-synthase and other proteins. proV - 3.6.3.32 ko:K02000 ko02010,map02010 M00208 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.12 - - ABC_tran,CBS LIIFOLDO_02383 435591.BDI_3855 7.48e-170 486.0 COG3746@1|root,COG3746@2|Bacteria,4NJYN@976|Bacteroidetes,2FQ5X@200643|Bacteroidia,22XEX@171551|Porphyromonadaceae 976|Bacteroidetes P phosphate-selective porin O and P - - - - - - - - - - - - Porin_O_P LIIFOLDO_02384 1235813.JCM10003_2416 4e-136 393.0 COG1741@1|root,COG1741@2|Bacteria,4NFZD@976|Bacteroidetes,2FQT2@200643|Bacteroidia 976|Bacteroidetes S Belongs to the pirin family - - - ko:K06911 - - - - ko00000 - - - Pirin,Pirin_C LIIFOLDO_02385 378806.STAUR_6545 4.34e-25 102.0 COG2353@1|root,COG2353@2|Bacteria,1R9XD@1224|Proteobacteria,42T4I@68525|delta/epsilon subdivisions,2WPAC@28221|Deltaproteobacteria,2YW13@29|Myxococcales 28221|Deltaproteobacteria S Belongs to the UPF0312 family - - - - - - - - - - - - YceI LIIFOLDO_02386 1121899.Q764_13135 3.92e-92 275.0 COG1335@1|root,COG1335@2|Bacteria,4NMT9@976|Bacteroidetes,1I1W0@117743|Flavobacteriia,2P0HP@237|Flavobacterium 976|Bacteroidetes Q Isochorismatase family - - - - - - - - - - - - Isochorismatase LIIFOLDO_02387 743722.Sph21_3758 1.46e-27 115.0 COG2207@1|root,COG2207@2|Bacteria,4NQI6@976|Bacteroidetes,1ITW3@117747|Sphingobacteriia 976|Bacteroidetes K helix_turn_helix, arabinose operon control protein - - - - - - - - - - - - HTH_18 LIIFOLDO_02388 763034.HMPREF9446_03245 7.08e-38 129.0 COG1396@1|root,COG1396@2|Bacteria,4NRHE@976|Bacteroidetes,2FT8H@200643|Bacteroidia,4ARKN@815|Bacteroidaceae 976|Bacteroidetes K Toxin-antitoxin system, antitoxin component, Xre family - - - - - - - - - - - - HTH_3,HTH_31 LIIFOLDO_02389 763034.HMPREF9446_03243 1.85e-47 165.0 COG3550@1|root,COG3550@2|Bacteria,4NFYY@976|Bacteroidetes,2FP3A@200643|Bacteroidia,4AMRG@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - 2.7.11.1 ko:K07154 - - - - ko00000,ko01000,ko01001,ko02048 - - - Couple_hipA,HipA_C LIIFOLDO_02390 763034.HMPREF9446_03243 3.08e-55 185.0 COG3550@1|root,COG3550@2|Bacteria,4NFYY@976|Bacteroidetes,2FP3A@200643|Bacteroidia,4AMRG@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - 2.7.11.1 ko:K07154 - - - - ko00000,ko01000,ko01001,ko02048 - - - Couple_hipA,HipA_C LIIFOLDO_02391 470145.BACCOP_01685 6.77e-204 574.0 COG3550@1|root,COG3550@2|Bacteria,4NFYY@976|Bacteroidetes,2FP3A@200643|Bacteroidia,4AMRG@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - 2.7.11.1 ko:K07154 - - - - ko00000,ko01000,ko01001,ko02048 - - - Couple_hipA,HipA_C LIIFOLDO_02393 272559.BF9343_1481 5.94e-88 272.0 COG1442@1|root,COG1442@2|Bacteria,4NNFX@976|Bacteroidetes,2G2H3@200643|Bacteroidia,4AVYW@815|Bacteroidaceae 976|Bacteroidetes M Glycosyl transferase family 8 - - - - - - - - - - - - Glyco_transf_8 LIIFOLDO_02394 226186.BT_1652 2.67e-164 479.0 COG2244@1|root,COG2244@2|Bacteria,4NFKD@976|Bacteroidetes,2FNDA@200643|Bacteroidia,4AKA1@815|Bacteroidaceae 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - Polysacc_synt_3,Polysacc_synt_C LIIFOLDO_02395 411477.PARMER_02882 3.19e-127 380.0 COG3307@1|root,COG3307@2|Bacteria,4NPAM@976|Bacteroidetes,2FNIA@200643|Bacteroidia,22YVC@171551|Porphyromonadaceae 976|Bacteroidetes M -O-antigen - - - - - - - - - - - - - LIIFOLDO_02396 226186.BT_0479 1.28e-88 272.0 COG1216@1|root,COG1216@2|Bacteria,4NFW5@976|Bacteroidetes,2FPA8@200643|Bacteroidia,4AVU2@815|Bacteroidaceae 976|Bacteroidetes M Glycosyltransferase like family 2 - - - ko:K07011 - - - - ko00000 - - - Glyco_tranf_2_3,Glycos_transf_2 LIIFOLDO_02397 694427.Palpr_0409 1.31e-144 421.0 COG0438@1|root,COG0438@2|Bacteria,4NGFN@976|Bacteroidetes,2FQAC@200643|Bacteroidia,22WKS@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyltransferase - - - - - - - - - - - - DUF1972,Glyco_transf_4,Glycos_transf_1 LIIFOLDO_02398 435591.BDI_1463 1.22e-291 799.0 COG1004@1|root,COG1004@2|Bacteria,4NE00@976|Bacteroidetes,2FMZ9@200643|Bacteroidia,22WMK@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the UDP-glucose GDP-mannose dehydrogenase family ugd - 1.1.1.22 ko:K00012 ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100 M00014,M00129,M00361,M00362 R00286 RC00291 ko00000,ko00001,ko00002,ko01000 - - - UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N LIIFOLDO_02400 435591.BDI_1461 0.0 1601.0 COG0370@1|root,COG1918@1|root,COG0370@2|Bacteria,COG1918@2|Bacteria,4NEII@976|Bacteroidetes,2FNKT@200643|Bacteroidia,22VWF@171551|Porphyromonadaceae 976|Bacteroidetes P transporter of a GTP-driven Fe(2 ) uptake system feoB - - ko:K04759 - - - - ko00000,ko02000 9.A.8.1 - - FeoA,FeoB_C,FeoB_N,Gate LIIFOLDO_02401 435591.BDI_1460 1.32e-111 320.0 2EVRI@1|root,33P5G@2|Bacteria,4NYE6@976|Bacteroidetes,2FVFS@200643|Bacteroidia,22Z2J@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_02402 435591.BDI_1459 4.2e-96 279.0 COG0801@1|root,COG0801@2|Bacteria,4NWDI@976|Bacteroidetes,2FUPY@200643|Bacteroidia,22YV5@171551|Porphyromonadaceae 976|Bacteroidetes H 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase folK2 - 2.7.6.3 ko:K00950 ko00790,ko01100,map00790,map01100 M00126,M00841 R03503 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - C_GCAxxG_C_C,HPPK LIIFOLDO_02403 435591.BDI_1458 3e-250 686.0 COG2264@1|root,COG2264@2|Bacteria 2|Bacteria J protein methyltransferase activity prmA - 2.1.1.222,2.1.1.64 ko:K00568,ko:K02687 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00117 R04988,R05614,R08769,R08781 RC00003,RC00392,RC01895 ko00000,ko00001,ko00002,ko01000,ko03009 - - - Methyltransf_12,Methyltransf_21,Methyltransf_23,Methyltransf_25,Methyltransf_31,PrmA LIIFOLDO_02404 435591.BDI_1457 1.33e-283 775.0 COG0438@1|root,COG0438@2|Bacteria,4NFMB@976|Bacteroidetes,2FMJE@200643|Bacteroidia,22XBH@171551|Porphyromonadaceae 976|Bacteroidetes M transferase activity, transferring glycosyl groups - - - - - - - - - - - - Glyco_trans_1_4 LIIFOLDO_02405 435591.BDI_1456 9.93e-307 835.0 COG0438@1|root,COG0438@2|Bacteria,4PKGJ@976|Bacteroidetes,2FRNG@200643|Bacteroidia,22XF2@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyltransferase Family 4 - - - - - - - - - - - - Glyco_trans_1_4,Glyco_trans_4_4,Glyco_transf_4 LIIFOLDO_02406 435591.BDI_1455 4.02e-151 424.0 COG2120@1|root,COG2120@2|Bacteria,4NN16@976|Bacteroidetes,2FW3I@200643|Bacteroidia,22Z1Z@171551|Porphyromonadaceae 976|Bacteroidetes S GlcNAc-PI de-N-acetylase - - - - - - - - - - - - PIG-L LIIFOLDO_02407 435591.BDI_1454 0.0 893.0 COG0726@1|root,COG0726@2|Bacteria,4NF79@976|Bacteroidetes,2FR2H@200643|Bacteroidia,22X5H@171551|Porphyromonadaceae 976|Bacteroidetes G polysaccharide deacetylase - - - - - - - - - - - - - LIIFOLDO_02408 435591.BDI_1453 5.31e-243 665.0 COG2348@1|root,COG2348@2|Bacteria,4NQ1R@976|Bacteroidetes,2FTKE@200643|Bacteroidia,22Y8E@171551|Porphyromonadaceae 976|Bacteroidetes V Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_6 LIIFOLDO_02409 435591.BDI_1452 1.08e-245 675.0 COG0468@1|root,COG0468@2|Bacteria,4NEXT@976|Bacteroidetes,2FN5D@200643|Bacteroidia,22WEY@171551|Porphyromonadaceae 976|Bacteroidetes L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage recA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - ko:K03553 ko03440,map03440 M00729 - - ko00000,ko00001,ko00002,ko03400 - - - RecA LIIFOLDO_02410 435591.BDI_1451 3.06e-108 311.0 COG1225@1|root,COG1225@2|Bacteria,4NNGK@976|Bacteroidetes,2FNTB@200643|Bacteroidia,22Y01@171551|Porphyromonadaceae 976|Bacteroidetes O Thiol peroxidase bcp - 1.11.1.15 ko:K03564 - - - - ko00000,ko01000 - - - AhpC-TSA LIIFOLDO_02411 435591.BDI_1450 3.04e-303 825.0 COG1748@1|root,COG1748@2|Bacteria,4NE0Y@976|Bacteroidetes,2FMKT@200643|Bacteroidia,22WCZ@171551|Porphyromonadaceae 976|Bacteroidetes E Saccharopine dehydrogenase LYS1 - 1.5.1.7 ko:K00290 ko00300,ko00310,ko01100,ko01110,ko01130,ko01230,map00300,map00310,map01100,map01110,map01130,map01230 M00030,M00032 R00715 RC00217,RC01532 ko00000,ko00001,ko00002,ko01000 - - - Sacchrp_dh_C,Sacchrp_dh_NADP LIIFOLDO_02413 435591.BDI_3531 0.0 1476.0 COG4773@1|root,COG4773@2|Bacteria,4P1XR@976|Bacteroidetes,2G0GZ@200643|Bacteroidia,2323W@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent Receptor Plug Domain - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - Plug,TonB_dep_Rec LIIFOLDO_02414 435591.BDI_3530 6.25e-138 390.0 COG3201@1|root,COG3201@2|Bacteria,4NFJI@976|Bacteroidetes,2FRYG@200643|Bacteroidia,22YI0@171551|Porphyromonadaceae 976|Bacteroidetes H nicotinamide mononucleotide transporter pnuC - - ko:K03811 - - - - ko00000,ko02000 4.B.1.1 - - NMN_transporter LIIFOLDO_02415 435591.BDI_3529 4.83e-155 435.0 COG1564@1|root,COG1564@2|Bacteria,4NPR1@976|Bacteroidetes,2FP1N@200643|Bacteroidia,22XY5@171551|Porphyromonadaceae 976|Bacteroidetes H Thiamin pyrophosphokinase, catalytic domain thiN - 2.7.6.2 ko:K00949 ko00730,ko01100,map00730,map01100 - R00619 RC00002,RC00017 ko00000,ko00001,ko01000 - - - TPK_catalytic LIIFOLDO_02417 435591.BDI_3527 0.0 952.0 COG2885@1|root,COG5010@1|root,COG2885@2|Bacteria,COG5010@2|Bacteria,4NJN8@976|Bacteroidetes,2FMCB@200643|Bacteroidia,22X1J@171551|Porphyromonadaceae 976|Bacteroidetes M Domain of unknown function, B. Theta Gene description (DUF3868) - - - - - - - - - - - - DUF3868,OmpA LIIFOLDO_02418 435591.BDI_3526 1.68e-137 388.0 COG2885@1|root,COG2885@2|Bacteria,4NN9C@976|Bacteroidetes,2FPCM@200643|Bacteroidia,2305C@171551|Porphyromonadaceae 976|Bacteroidetes M Protein of unknown function (DUF3575) - - - - - - - - - - - - DUF3575 LIIFOLDO_02419 435591.BDI_3525 3.27e-58 180.0 COG0776@1|root,COG0776@2|Bacteria 2|Bacteria L regulation of translation - - - ko:K03530 - - - - ko00000,ko03032,ko03036,ko03400 - - - Bac_DNA_binding LIIFOLDO_02420 435591.BDI_3524 9.71e-106 306.0 COG5464@1|root,COG5464@2|Bacteria,4P2RK@976|Bacteroidetes,2G319@200643|Bacteroidia 976|Bacteroidetes S PD-(D/E)XK nuclease family transposase - - - - - - - - - - - - PDDEXK_2 LIIFOLDO_02421 999419.HMPREF1077_00170 1.9e-110 366.0 28JMJ@1|root,2Z9E2@2|Bacteria,4NK9N@976|Bacteroidetes,2FPY0@200643|Bacteroidia,22ZAM@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - DUF4906 LIIFOLDO_02425 411477.PARMER_01599 1.6e-98 304.0 2DV6Y@1|root,33UEJ@2|Bacteria,4P844@976|Bacteroidetes 976|Bacteroidetes S Major fimbrial subunit protein (FimA) - - - - - - - - - - - - P_gingi_FimA LIIFOLDO_02426 1122931.AUAE01000027_gene2410 1.74e-74 238.0 2FA05@1|root,3429A@2|Bacteria,4P4HT@976|Bacteroidetes,2FPCP@200643|Bacteroidia,230XE@171551|Porphyromonadaceae 976|Bacteroidetes S Fimbrillin-A associated anchor proteins Mfa1 and Mfa2 - GO:0008150,GO:0009987,GO:0016043,GO:0030030,GO:0043711,GO:0071840 - - - - - - - - - - Mfa2 LIIFOLDO_02427 435591.BDI_3517 2.99e-251 695.0 2ENTM@1|root,33GET@2|Bacteria 2|Bacteria S Major fimbrial subunit protein (FimA) - - - - - - - - - - - - P_gingi_FimA LIIFOLDO_02428 435591.BDI_3516 7.64e-273 746.0 COG4974@1|root,COG4974@2|Bacteria,4NFDF@976|Bacteroidetes,2FQ0U@200643|Bacteroidia,22Z7E@171551|Porphyromonadaceae 976|Bacteroidetes L Arm DNA-binding domain - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase LIIFOLDO_02429 435591.BDI_3515 3.65e-60 185.0 COG5464@1|root,COG5464@2|Bacteria 2|Bacteria S double-stranded DNA endodeoxyribonuclease activity - - - - - - - - - - - - PDDEXK_2 LIIFOLDO_02430 742727.HMPREF9447_03821 1.1e-42 141.0 COG1669@1|root,COG1669@2|Bacteria,4NV8X@976|Bacteroidetes,2FTGR@200643|Bacteroidia,4ARCQ@815|Bacteroidaceae 976|Bacteroidetes S Nucleotidyltransferase domain - - - ko:K07075 - - - - ko00000 - - - NTP_transf_2 LIIFOLDO_02431 435591.BDI_2430 3.66e-54 169.0 29XE6@1|root,30J4B@2|Bacteria,4NX12@976|Bacteroidetes,2FZQV@200643|Bacteroidia 976|Bacteroidetes S Protein of unknown function (DUF2442) - - - - - - - - - - - - DUF2442 LIIFOLDO_02432 435591.BDI_2429 6.99e-136 385.0 2CC7S@1|root,2ZE5B@2|Bacteria,4P8MA@976|Bacteroidetes 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_02433 435591.BDI_2428 0.0 1531.0 COG1472@1|root,COG1472@2|Bacteria,4NE90@976|Bacteroidetes,2FNZH@200643|Bacteroidia,22WKB@171551|Porphyromonadaceae 976|Bacteroidetes G Fibronectin type III-like domain bglB - 3.2.1.21 ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 - R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040 RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248 ko00000,ko00001,ko01000 - GH3 - Fn3-like,Glyco_hydro_3,Glyco_hydro_3_C LIIFOLDO_02434 435591.BDI_2427 0.0 1207.0 COG3934@1|root,COG3934@2|Bacteria,4NF13@976|Bacteroidetes,2FNPI@200643|Bacteroidia,22X47@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of unknown function (DUF4091) - - - - - - - - - - - - DUF4091 LIIFOLDO_02435 435591.BDI_2426 5.59e-277 755.0 COG0535@1|root,COG0535@2|Bacteria,4NHXT@976|Bacteroidetes,2FN32@200643|Bacteroidia,22WJH@171551|Porphyromonadaceae 976|Bacteroidetes C Radical SAM domain protein - - - - - - - - - - - - Fer4_12,Radical_SAM,SPASM LIIFOLDO_02436 1122931.AUAE01000023_gene1522 4.07e-17 80.9 2E9KC@1|root,333T4@2|Bacteria,4NYQ8@976|Bacteroidetes,2FV2E@200643|Bacteroidia,22YRT@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_02437 435591.BDI_2425 5.8e-118 346.0 2E9KC@1|root,322EP@2|Bacteria,4PKA6@976|Bacteroidetes,2FTNJ@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_02438 435591.BDI_2424 0.0 1182.0 COG1132@1|root,COG1132@2|Bacteria,4NE2D@976|Bacteroidetes,2FMUK@200643|Bacteroidia,22VY0@171551|Porphyromonadaceae 976|Bacteroidetes V ABC transporter, ATP-binding protein msbA - - ko:K06147,ko:K11085 ko02010,map02010 - - - ko00000,ko00001,ko01000,ko02000 3.A.1.106,3.A.1.109,3.A.1.21 - - ABC_membrane,ABC_tran LIIFOLDO_02439 435591.BDI_2423 0.0 1636.0 COG1554@1|root,COG1554@2|Bacteria,4NEWW@976|Bacteroidetes,2FMF9@200643|Bacteroidia,22W4V@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 65, N-terminal domain - - 3.2.1.51 ko:K15923 ko00511,map00511 - - - ko00000,ko00001,ko01000 - GH95 - Glyco_hyd_65N_2 LIIFOLDO_02440 435591.BDI_2422 2.3e-297 810.0 COG3637@1|root,COG3637@2|Bacteria,4NGSV@976|Bacteroidetes,2FQ5B@200643|Bacteroidia,22W52@171551|Porphyromonadaceae 976|Bacteroidetes M Phosphate-selective porin O and P - - - - - - - - - - - - Porin_O_P LIIFOLDO_02441 435591.BDI_2421 9.74e-154 432.0 COG0704@1|root,COG0704@2|Bacteria,4NNT5@976|Bacteroidetes,2FNP4@200643|Bacteroidia,22XQJ@171551|Porphyromonadaceae 976|Bacteroidetes P Plays a role in the regulation of phosphate uptake phoU - - ko:K02039 - - - - ko00000 - - - PhoU LIIFOLDO_02442 435591.BDI_2420 4.49e-181 503.0 COG1117@1|root,COG1117@2|Bacteria,4NFAB@976|Bacteroidetes,2FMN7@200643|Bacteroidia,22XA4@171551|Porphyromonadaceae 976|Bacteroidetes P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system pstB - 3.6.3.27 ko:K02036 ko02010,map02010 M00222 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.7 - - ABC_tran LIIFOLDO_02443 435591.BDI_2419 2.7e-200 556.0 COG0581@1|root,COG0581@2|Bacteria,4NGBA@976|Bacteroidetes,2FP5W@200643|Bacteroidia,22WKG@171551|Porphyromonadaceae 976|Bacteroidetes P phosphate transport system permease pstA - - ko:K02038 ko02010,map02010 M00222 - - ko00000,ko00001,ko00002,ko02000 3.A.1.7 - - BPD_transp_1 LIIFOLDO_02444 435591.BDI_2418 1.08e-270 742.0 COG0226@1|root,COG0573@1|root,COG0226@2|Bacteria,COG0573@2|Bacteria,4NFDD@976|Bacteroidetes,2FNIH@200643|Bacteroidia,22WSA@171551|Porphyromonadaceae 976|Bacteroidetes P probably responsible for the translocation of the substrate across the membrane pstC - - ko:K02037 ko02010,map02010 M00222 - - ko00000,ko00001,ko00002,ko02000 3.A.1.7 - - BPD_transp_1,PBP_like_2 LIIFOLDO_02445 435591.BDI_2417 0.0 997.0 COG0427@1|root,COG0427@2|Bacteria,4NFS3@976|Bacteroidetes,2FNCA@200643|Bacteroidia,22WU5@171551|Porphyromonadaceae 976|Bacteroidetes C acetyl-CoA hydrolase scpC - 2.8.3.18,3.1.2.1 ko:K01067,ko:K18118 ko00020,ko00620,ko00650,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00650,map01100,map01110,map01120,map01130,map01200 M00009,M00011 R00227,R10343 RC00004,RC00012,RC00014 ko00000,ko00001,ko00002,ko01000 - - - AcetylCoA_hyd_C,AcetylCoA_hydro LIIFOLDO_02447 435591.BDI_0517 2.14e-37 128.0 COG3086@1|root,COG3086@2|Bacteria,4NV0R@976|Bacteroidetes,2FS4Y@200643|Bacteroidia,22YNS@171551|Porphyromonadaceae 976|Bacteroidetes T Positive regulator of sigma(E), RseC MucC - - - ko:K03803 - - - - ko00000,ko03021 - - - RseC_MucC LIIFOLDO_02448 435591.BDI_0516 1.39e-205 570.0 COG2768@1|root,COG2878@1|root,COG2768@2|Bacteria,COG2878@2|Bacteria,4NFEB@976|Bacteroidetes,2FMPN@200643|Bacteroidia,22XEE@171551|Porphyromonadaceae 976|Bacteroidetes C Ferredoxin rnfB - - ko:K03616 - - - - ko00000 - - - FeS,Fer4 LIIFOLDO_02449 435591.BDI_0515 1.12e-301 825.0 COG4656@1|root,COG4656@2|Bacteria,4NIS7@976|Bacteroidetes,2FMAQ@200643|Bacteroidia,22WJW@171551|Porphyromonadaceae 976|Bacteroidetes C Part of a membrane complex involved in electron transport rnfC - - ko:K03615 - - - - ko00000 - - - Complex1_51K,Fer4_10,Fer4_17,Fer4_8,RnfC_N,SLBB LIIFOLDO_02450 435591.BDI_0514 3.26e-226 624.0 COG4658@1|root,COG4658@2|Bacteria,4NESE@976|Bacteroidetes,2FM2Y@200643|Bacteroidia,22XDK@171551|Porphyromonadaceae 976|Bacteroidetes C Part of a membrane complex involved in electron transport rnfD - - ko:K03614 - - - - ko00000 - - - NQR2_RnfD_RnfE LIIFOLDO_02451 435591.BDI_0513 2.86e-129 368.0 COG4659@1|root,COG4659@2|Bacteria,4NP1D@976|Bacteroidetes,2FM22@200643|Bacteroidia,22Y0Q@171551|Porphyromonadaceae 976|Bacteroidetes C Part of a membrane complex involved in electron transport rnfG - - ko:K03612 - - - - ko00000 - - - FMN_bind LIIFOLDO_02452 435591.BDI_0512 6.43e-126 359.0 COG4660@1|root,COG4660@2|Bacteria,4NHHP@976|Bacteroidetes,2FM8R@200643|Bacteroidia,22VWQ@171551|Porphyromonadaceae 976|Bacteroidetes C Part of a membrane complex involved in electron transport rnfE - - ko:K03613 - - - - ko00000 - - - Rnf-Nqr LIIFOLDO_02453 435591.BDI_0511 4.19e-120 344.0 COG4657@1|root,COG4657@2|Bacteria,4NGEZ@976|Bacteroidetes,2FM9J@200643|Bacteroidia,22WWX@171551|Porphyromonadaceae 976|Bacteroidetes C Part of a membrane complex involved in electron transport rnfA - - ko:K03617 - - - - ko00000 - - - Rnf-Nqr LIIFOLDO_02454 435591.BDI_0510 7.68e-253 693.0 COG1087@1|root,COG1087@2|Bacteria,4NEM9@976|Bacteroidetes,2FMV2@200643|Bacteroidia,22X6S@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the NAD(P)-dependent epimerase dehydratase family galE - 5.1.3.2 ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00361,M00362,M00632 R00291,R02984 RC00289 ko00000,ko00001,ko00002,ko01000 - - - Epimerase,GDP_Man_Dehyd LIIFOLDO_02455 435591.BDI_0509 0.0 1545.0 COG0642@1|root,COG0784@1|root,COG0784@2|Bacteria,COG2205@2|Bacteria,4NDXU@976|Bacteroidetes,2FXAU@200643|Bacteroidia,231GG@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - 7TMR-DISMED2,AAA_16,GAF,HATPase_c,HisKA,PAS_3,PAS_9,Pkinase,Response_reg,SpoIIE,Y_Y_Y LIIFOLDO_02456 435591.BDI_0508 2.48e-127 363.0 COG1011@1|root,COG1011@2|Bacteria,4NQT8@976|Bacteroidetes,2FMXN@200643|Bacteroidia 976|Bacteroidetes S HAD hydrolase, family IA, variant 3 - GO:0003674,GO:0003824,GO:0006766,GO:0006767,GO:0006771,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042578,GO:0042726,GO:0042727,GO:0043726,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 3.1.3.10,3.1.3.104 ko:K07025,ko:K20866,ko:K21063 ko00010,ko00740,ko01100,ko01110,ko01120,map00010,map00740,map01100,map01110,map01120 M00125 R00947,R07280 RC00017,RC00078 ko00000,ko00001,ko00002,ko01000 - - - HAD_2,Hydrolase LIIFOLDO_02457 435591.BDI_0507 3.63e-311 846.0 COG4198@1|root,COG4198@2|Bacteria,4NGQH@976|Bacteroidetes,2FN23@200643|Bacteroidia,22VYG@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF1015) - - - - - - - - - - - - DUF1015 LIIFOLDO_02458 435591.BDI_0506 7.08e-186 520.0 COG1052@1|root,COG1052@2|Bacteria,4NFDE@976|Bacteroidetes,2FP6R@200643|Bacteroidia,22WZN@171551|Porphyromonadaceae 976|Bacteroidetes CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family serA - 1.1.1.399,1.1.1.95 ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 M00020 R01513 RC00031 ko00000,ko00001,ko00002,ko01000,ko04147 - - - 2-Hacid_dh,2-Hacid_dh_C LIIFOLDO_02459 435591.BDI_0505 2.5e-258 707.0 COG1932@1|root,COG1932@2|Bacteria,4NE06@976|Bacteroidetes,2FMET@200643|Bacteroidia,22WAK@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine serC - 2.6.1.52 ko:K00831 ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230 M00020,M00124 R04173,R05085 RC00006,RC00036 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_5 LIIFOLDO_02460 435591.BDI_0504 2.63e-301 822.0 COG2256@1|root,COG2256@2|Bacteria,4NEV8@976|Bacteroidetes,2FNF4@200643|Bacteroidia,22W72@171551|Porphyromonadaceae 976|Bacteroidetes L ATPase (AAA rarA - - ko:K07478 - - - - ko00000 - - - AAA,AAA_assoc_2,MgsA_C,RuvB_N LIIFOLDO_02461 435591.BDI_0503 0.0 998.0 COG0521@1|root,COG0521@2|Bacteria,4NKEX@976|Bacteroidetes,2FQAE@200643|Bacteroidia 976|Bacteroidetes H Susd and RagB outer membrane lipoprotein - - - - - - - - - - - - SusD-like,SusD-like_2 LIIFOLDO_02462 435591.BDI_0502 0.0 2080.0 COG1629@1|root,COG4206@1|root,COG4206@2|Bacteria,COG4771@2|Bacteria,4NDU8@976|Bacteroidetes,2FMRZ@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_02463 435591.BDI_1377 4.52e-201 556.0 COG0077@1|root,COG0077@2|Bacteria,4NEEK@976|Bacteroidetes,2FNHW@200643|Bacteroidia,22XE0@171551|Porphyromonadaceae 976|Bacteroidetes E Prephenate dehydratase pheA - 4.2.1.51 ko:K04518 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00024 R00691,R01373 RC00360 ko00000,ko00001,ko00002,ko01000 - - - PDT LIIFOLDO_02464 435591.BDI_1378 4.27e-296 806.0 COG0436@1|root,COG0436@2|Bacteria,4NF2E@976|Bacteroidetes,2FN0N@200643|Bacteroidia,22X91@171551|Porphyromonadaceae 976|Bacteroidetes E Aminotransferase class I and II dapL - 2.6.1.83 ko:K10206,ko:K14261 ko00300,ko01100,ko01110,ko01130,ko01230,map00300,map01100,map01110,map01130,map01230 M00527 R07613 RC00006,RC01847 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_1_2 LIIFOLDO_02465 435591.BDI_1379 4.48e-257 704.0 COG1605@1|root,COG2876@1|root,COG1605@2|Bacteria,COG2876@2|Bacteria,4NDU4@976|Bacteroidetes,2FPF1@200643|Bacteroidia,22WB4@171551|Porphyromonadaceae 976|Bacteroidetes E Cytochrome C4 pheB - 5.4.99.5 ko:K04516 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00024,M00025 R01715 RC03116 ko00000,ko00001,ko00002,ko01000 - - - CM_2,DAHP_synth_1 LIIFOLDO_02466 435591.BDI_1380 5.66e-183 509.0 COG0287@1|root,COG0287@2|Bacteria,4NIUC@976|Bacteroidetes,2FMD4@200643|Bacteroidia,22W24@171551|Porphyromonadaceae 976|Bacteroidetes E Prephenate dehydrogenase tyrA - 1.3.1.12 ko:K00210 ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230 M00025 R01728 RC00125 ko00000,ko00001,ko00002,ko01000 - - - PDH LIIFOLDO_02467 435591.BDI_1381 2.92e-312 853.0 COG0534@1|root,COG0534@2|Bacteria,4NJ6N@976|Bacteroidetes,2FRIF@200643|Bacteroidia,23029@171551|Porphyromonadaceae 976|Bacteroidetes V MatE - - - - - - - - - - - - MatE LIIFOLDO_02468 435591.BDI_1382 2.78e-127 362.0 COG0664@1|root,COG0664@2|Bacteria,4NMDG@976|Bacteroidetes,2FMUI@200643|Bacteroidia,22Y9Z@171551|Porphyromonadaceae 976|Bacteroidetes T Cyclic nucleotide-binding domain - - - - - - - - - - - - cNMP_binding LIIFOLDO_02469 435591.BDI_1383 0.0 865.0 COG0534@1|root,COG0534@2|Bacteria,4NEBB@976|Bacteroidetes,2FN29@200643|Bacteroidia,22X54@171551|Porphyromonadaceae 976|Bacteroidetes V Mate efflux family protein norM - - ko:K03327 - - - - ko00000,ko02000 2.A.66.1 - - MatE LIIFOLDO_02470 435591.BDI_1384 0.0 889.0 COG0477@1|root,COG0477@2|Bacteria,4PKB1@976|Bacteroidetes,2G0K4@200643|Bacteroidia,231CP@171551|Porphyromonadaceae 976|Bacteroidetes EGP Major Facilitator Superfamily - - - ko:K08169 - - - - ko00000,ko02000 2.A.1.3.17 - - MFS_1 LIIFOLDO_02471 435591.BDI_1385 0.0 879.0 COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,2FMRV@200643|Bacteroidia,22W60@171551|Porphyromonadaceae 976|Bacteroidetes T COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains zraR_2 - - - - - - - - - - - HTH_8,Response_reg,Sigma54_activat LIIFOLDO_02472 435591.BDI_1386 6.84e-310 845.0 COG5000@1|root,COG5000@2|Bacteria,4NEWF@976|Bacteroidetes,2FMRD@200643|Bacteroidia,22WZW@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase - - - - - - - - - - - - HATPase_c,PAS_8 LIIFOLDO_02473 435591.BDI_1387 1.16e-283 777.0 COG1914@1|root,COG1914@2|Bacteria,4NENE@976|Bacteroidetes,2FP05@200643|Bacteroidia,22W56@171551|Porphyromonadaceae 976|Bacteroidetes P Natural resistance-associated macrophage protein mntH - - ko:K03322 - - - - ko00000,ko02000 2.A.55.2.6,2.A.55.3 - - Nramp,Usp LIIFOLDO_02474 435591.BDI_1388 0.0 1191.0 COG0008@1|root,COG0008@2|Bacteria,4NFCC@976|Bacteroidetes,2FMVI@200643|Bacteroidia,22W5Z@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA glnS - 6.1.1.18 ko:K01886 ko00970,ko01100,map00970,map01100 M00359,M00360 R03652 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - tRNA-synt_1c,tRNA-synt_1c_C LIIFOLDO_02475 435591.BDI_1389 2.38e-299 822.0 COG0457@1|root,COG0457@2|Bacteria,4NG1I@976|Bacteroidetes,2FQPG@200643|Bacteroidia,22YCD@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat - - - - - - - - - - - - TPR_1,TPR_16,TPR_19,TPR_2,TPR_6,TPR_7,TPR_8 LIIFOLDO_02476 435591.BDI_1390 1.25e-210 583.0 COG2035@1|root,COG2035@2|Bacteria,4NFKI@976|Bacteroidetes,2FPD1@200643|Bacteroidia,22WH6@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF368) - - - ko:K08974 - - - - ko00000 - - - DUF368 LIIFOLDO_02477 1235803.C825_05285 6.06e-36 122.0 COG1143@1|root,COG1143@2|Bacteria,4PKDY@976|Bacteroidetes,2G3DT@200643|Bacteroidia,22YE7@171551|Porphyromonadaceae 976|Bacteroidetes C 4Fe-4S dicluster domain - - 1.2.7.3 ko:K00176 ko00020,ko00720,ko01100,ko01120,ko01200,map00020,map00720,map01100,map01120,map01200 M00009,M00011,M00173,M00620 R01197 RC00004,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - Fer4 LIIFOLDO_02478 435591.BDI_1391 2.41e-258 708.0 COG0674@1|root,COG0674@2|Bacteria,4NGYK@976|Bacteroidetes,2FM6R@200643|Bacteroidia,22WCE@171551|Porphyromonadaceae 976|Bacteroidetes C Catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA vorB - 1.2.7.11,1.2.7.3 ko:K00174 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00009,M00011,M00173,M00620 R01196,R01197 RC00004,RC02742,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - PFOR_II,POR_N LIIFOLDO_02479 435591.BDI_0633 5.05e-314 855.0 COG0477@1|root,COG2814@2|Bacteria,4NG5F@976|Bacteroidetes,2FP47@200643|Bacteroidia,231CE@171551|Porphyromonadaceae 976|Bacteroidetes EGP Major Facilitator Superfamily ampG - - ko:K08218 ko01501,map01501 M00628 - - ko00000,ko00001,ko00002,ko02000 2.A.1.25 - - MFS_1 LIIFOLDO_02480 435591.BDI_0632 4.11e-224 616.0 COG1520@1|root,COG1520@2|Bacteria,4NX17@976|Bacteroidetes,2FQ59@200643|Bacteroidia 976|Bacteroidetes S COG NOG38781 non supervised orthologous group - - - - - - - - - - - - - LIIFOLDO_02481 435591.BDI_0631 3.34e-212 585.0 COG1830@1|root,COG1830@2|Bacteria,4P0GF@976|Bacteroidetes,2FP1C@200643|Bacteroidia 976|Bacteroidetes G DeoC/LacD family aldolase - - 2.3.1.245 ko:K08321 ko02024,map02024 - - - ko00000,ko00001,ko01000 - - - DeoC LIIFOLDO_02482 435591.BDI_0630 8.4e-136 385.0 COG1461@1|root,COG1461@2|Bacteria,4P1FU@976|Bacteroidetes,2FPD2@200643|Bacteroidia 976|Bacteroidetes S DAK2 domain protein - - 2.7.1.121 ko:K05879 ko00561,ko01100,map00561,map01100 - R01012 RC00015,RC00017 ko00000,ko00001,ko01000 - - - Dak2 LIIFOLDO_02483 435591.BDI_0629 3.07e-239 658.0 COG2376@1|root,COG2376@2|Bacteria,4NJC0@976|Bacteroidetes,2FPW4@200643|Bacteroidia 976|Bacteroidetes G Psort location Cytoplasmic, score 8.96 - - 2.7.1.121,2.7.1.28,2.7.1.29,4.6.1.15 ko:K00863,ko:K05878 ko00051,ko00561,ko00680,ko01100,ko01120,ko01200,ko04622,map00051,map00561,map00680,map01100,map01120,map01200,map04622 M00344 R01011,R01012,R01059 RC00002,RC00015,RC00017 ko00000,ko00001,ko00002,ko01000 - - - Dak1,Dak2 LIIFOLDO_02484 435591.BDI_0628 1.94e-70 212.0 2DMM9@1|root,32SDB@2|Bacteria,4PPZP@976|Bacteroidetes,2G1AX@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_02485 435591.BDI_0627 0.0 1587.0 COG0755@1|root,COG1333@1|root,COG0755@2|Bacteria,COG1333@2|Bacteria,4NDY1@976|Bacteroidetes,2FKZ1@200643|Bacteroidia,22W1T@171551|Porphyromonadaceae 976|Bacteroidetes O cytochrome c-type biogenesis protein CcsB ccmC - - - - - - - - - - - Cytochrom_C_asm,ResB LIIFOLDO_02486 435591.BDI_0626 0.0 2737.0 COG1262@1|root,COG1262@2|Bacteria,4NKT6@976|Bacteroidetes,2FR3S@200643|Bacteroidia 976|Bacteroidetes S Sulfatase-modifying factor enzyme 1 - - - - - - - - - - - - FGE-sulfatase LIIFOLDO_02487 435591.BDI_0625 4.34e-189 524.0 COG3822@1|root,COG3822@2|Bacteria,4P1IF@976|Bacteroidetes,2FM0T@200643|Bacteroidia 976|Bacteroidetes S ABC-type sugar transport system, auxiliary component - - 5.3.1.15 ko:K09988 ko00040,map00040 - R01898 RC00516 ko00000,ko00001,ko01000 - - - - LIIFOLDO_02488 435591.BDI_0624 1.16e-263 722.0 COG0251@1|root,COG0251@2|Bacteria,4NEVA@976|Bacteroidetes,2FN38@200643|Bacteroidia,22ZMQ@171551|Porphyromonadaceae 976|Bacteroidetes J endoribonuclease L-PSP - - - - - - - - - - - - - LIIFOLDO_02489 435591.BDI_0623 0.0 1206.0 COG1858@1|root,COG3391@1|root,COG1858@2|Bacteria,COG3391@2|Bacteria,4NIPP@976|Bacteroidetes,2FNMB@200643|Bacteroidia 976|Bacteroidetes C cytochrome c peroxidase - - - - - - - - - - - - Big_5,CBM_3,Cytochrom_D1,PKD LIIFOLDO_02490 435591.BDI_0622 1.83e-184 513.0 COG1414@1|root,COG1414@2|Bacteria,4NHTZ@976|Bacteroidetes,2FR53@200643|Bacteroidia,230HR@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix isocitrate lyase regulation - - - ko:K13641,ko:K19333 - - - - ko00000,ko03000 - - - HTH_IclR,IclR LIIFOLDO_02491 435591.BDI_0621 0.0 1505.0 COG0642@1|root,COG0784@1|root,COG0784@2|Bacteria,COG2205@2|Bacteria,4NDXU@976|Bacteroidetes,2FXAU@200643|Bacteroidia,231GG@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - 7TMR-DISMED2,AAA_16,GAF,HATPase_c,HisKA,PAS_3,PAS_9,Pkinase,Response_reg,SpoIIE,Y_Y_Y LIIFOLDO_02492 435591.BDI_0620 8.71e-57 179.0 COG0783@1|root,COG0783@2|Bacteria,4NQDD@976|Bacteroidetes,2FP8D@200643|Bacteroidia,22Y0J@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the Dps family dps - - ko:K04047 - - - - ko00000,ko03036 - - - Ferritin LIIFOLDO_02493 435591.BDI_3720 9.25e-134 379.0 COG0664@1|root,COG0664@2|Bacteria,4PJJ7@976|Bacteroidetes,2FYPA@200643|Bacteroidia 976|Bacteroidetes T - Catabolite gene activator and regulatory subunit of cAMP-dependent protein - - - - - - - - - - - - - LIIFOLDO_02494 435591.BDI_3719 2.06e-98 285.0 COG0454@1|root,COG0456@2|Bacteria,4NPGI@976|Bacteroidetes,2FSD4@200643|Bacteroidia,22YFW@171551|Porphyromonadaceae 976|Bacteroidetes K Acetyltransferase (GNAT) domain yjaB - - ko:K03827 - - - - ko00000,ko01000 - - - Acetyltransf_10 LIIFOLDO_02496 435591.BDI_3717 8.65e-254 695.0 COG2502@1|root,COG2502@2|Bacteria,4NFZA@976|Bacteroidetes,2FMP0@200643|Bacteroidia,22W9D@171551|Porphyromonadaceae 976|Bacteroidetes E aspartate--ammonia ligase asnA - 6.3.1.1 ko:K01914 ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230 - R00483 RC00010 ko00000,ko00001,ko01000 - - - AsnA LIIFOLDO_02497 435591.BDI_3716 7.82e-167 465.0 COG0692@1|root,COG0692@2|Bacteria,4NE2B@976|Bacteroidetes,2FM57@200643|Bacteroidia,22WGA@171551|Porphyromonadaceae 976|Bacteroidetes L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine ung GO:0003674,GO:0003824,GO:0004844,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0097510,GO:0140097,GO:1901360 3.2.2.27 ko:K03648 ko03410,ko05340,map03410,map05340 - - - ko00000,ko00001,ko01000,ko03400 - - - UDG LIIFOLDO_02498 435591.BDI_3715 0.0 1807.0 COG1452@1|root,COG1452@2|Bacteria,4NFWD@976|Bacteroidetes,2FM9F@200643|Bacteroidia,22W8Y@171551|Porphyromonadaceae 976|Bacteroidetes M Psort location OuterMembrane, score - - - - - - - - - - - - - LIIFOLDO_02499 435591.BDI_3714 1.76e-132 375.0 COG2206@1|root,COG2206@2|Bacteria,4PKEV@976|Bacteroidetes,2G3ER@200643|Bacteroidia,22XYR@171551|Porphyromonadaceae 976|Bacteroidetes T HDIG domain protein - - - ko:K06950 - - - - ko00000 - - - HD LIIFOLDO_02500 435591.BDI_3713 0.0 1657.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,4NE2Q@976|Bacteroidetes,2FPZU@200643|Bacteroidia,22VXZ@171551|Porphyromonadaceae 976|Bacteroidetes E Dipeptidyl peptidase IV (DPP IV) N-terminal region - - - - - - - - - - - - DPPIV_N,Peptidase_S9 LIIFOLDO_02501 435591.BDI_3709 1.37e-290 793.0 COG3876@1|root,COG3876@2|Bacteria,4NEXD@976|Bacteroidetes,2FN5Q@200643|Bacteroidia,22WI7@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF1343) - - - - - - - - - - - - DUF1343 LIIFOLDO_02502 435591.BDI_3708 0.0 1387.0 COG4206@1|root,COG4206@2|Bacteria,4NHH8@976|Bacteroidetes,2FQ8Y@200643|Bacteroidia,22WSP@171551|Porphyromonadaceae 976|Bacteroidetes H TonB-dependent receptor - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - Plug,TonB_dep_Rec LIIFOLDO_02503 435591.BDI_3707 4.56e-104 300.0 COG3187@1|root,COG3187@2|Bacteria,4NRFE@976|Bacteroidetes,2FQEM@200643|Bacteroidia,22YMY@171551|Porphyromonadaceae 976|Bacteroidetes O META domain - - - - - - - - - - - - META LIIFOLDO_02504 435591.BDI_3706 9.25e-94 274.0 COG3187@1|root,COG3187@2|Bacteria,4NRFE@976|Bacteroidetes,2FQEM@200643|Bacteroidia,22YMY@171551|Porphyromonadaceae 976|Bacteroidetes O META domain - - - - - - - - - - - - META LIIFOLDO_02505 435591.BDI_3705 0.0 871.0 COG0534@1|root,COG0534@2|Bacteria,4NDUF@976|Bacteroidetes,2G336@200643|Bacteroidia 976|Bacteroidetes V MatE - - - ko:K03327 - - - - ko00000,ko02000 2.A.66.1 - - MatE LIIFOLDO_02506 435591.BDI_3704 0.0 877.0 COG0739@1|root,COG0739@2|Bacteria,4NECF@976|Bacteroidetes,2FQ2Q@200643|Bacteroidia,22X4J@171551|Porphyromonadaceae 976|Bacteroidetes M Peptidase family M23 - - - - - - - - - - - - Peptidase_M23 LIIFOLDO_02507 435591.BDI_3703 4.58e-82 243.0 COG3304@1|root,COG3304@2|Bacteria,4NQSS@976|Bacteroidetes,2FTAX@200643|Bacteroidia,22Y70@171551|Porphyromonadaceae 976|Bacteroidetes S Inner membrane component domain yccF - - - - - - - - - - - YccF LIIFOLDO_02508 435591.BDI_3702 5.52e-204 563.0 COG0796@1|root,COG0796@2|Bacteria,4NG1C@976|Bacteroidetes,2FKYW@200643|Bacteroidia,22WDQ@171551|Porphyromonadaceae 976|Bacteroidetes M Provides the (R)-glutamate required for cell wall biosynthesis murI - 5.1.1.3 ko:K01776 ko00471,ko01100,map00471,map01100 - R00260 RC00302 ko00000,ko00001,ko01000,ko01011 - - - Asp_Glu_race LIIFOLDO_02509 435591.BDI_3701 4.35e-98 286.0 COG2825@1|root,COG2825@2|Bacteria,4NSCM@976|Bacteroidetes,2FQ15@200643|Bacteroidia,2321M@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane protein (OmpH-like) ompH - - ko:K06142 - - - - ko00000 - - - OmpH LIIFOLDO_02510 435591.BDI_3700 4.01e-111 320.0 COG2825@1|root,COG2825@2|Bacteria,4NH46@976|Bacteroidetes,2FQDW@200643|Bacteroidia,22XM9@171551|Porphyromonadaceae 976|Bacteroidetes M membrane ompH - - ko:K06142 - - - - ko00000 - - - OmpH LIIFOLDO_02511 435591.BDI_0371 3.45e-201 556.0 COG0739@1|root,COG0739@2|Bacteria,4NQX6@976|Bacteroidetes,2FT6W@200643|Bacteroidia,230GT@171551|Porphyromonadaceae 976|Bacteroidetes M Peptidase family M23 nlpD_2 - - - - - - - - - - - LysM,Peptidase_M23 LIIFOLDO_02512 435591.BDI_0372 7.21e-62 190.0 COG3093@1|root,COG3093@2|Bacteria,4PMT2@976|Bacteroidetes 976|Bacteroidetes K addiction module antidote protein HigA - - - - - - - - - - - - - LIIFOLDO_02513 435591.BDI_0373 8.81e-240 659.0 COG1638@1|root,COG1638@2|Bacteria,4NGV4@976|Bacteroidetes,2FQWN@200643|Bacteroidia 976|Bacteroidetes G Bacterial extracellular solute-binding protein, family 7 - - - - - - - - - - - - DctP LIIFOLDO_02514 435591.BDI_0374 8.33e-99 288.0 COG3090@1|root,COG3090@2|Bacteria,4NNRW@976|Bacteroidetes,2FTS1@200643|Bacteroidia 976|Bacteroidetes G Tripartite ATP-independent periplasmic transporters, DctQ component - - - - - - - - - - - - DctQ LIIFOLDO_02515 435591.BDI_0375 1.79e-274 755.0 COG1593@1|root,COG1593@2|Bacteria,4NE5T@976|Bacteroidetes,2FR36@200643|Bacteroidia 976|Bacteroidetes G Tripartite ATP-independent periplasmic transporter, DctM component - - - - - - - - - - - - DctM LIIFOLDO_02516 435591.BDI_0376 3.93e-292 796.0 COG1312@1|root,COG1312@2|Bacteria,4NFA5@976|Bacteroidetes,2FM15@200643|Bacteroidia,22WGQ@171551|Porphyromonadaceae 976|Bacteroidetes G Catalyzes the dehydration of D-mannonate uxuA GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005975,GO:0005996,GO:0006063,GO:0006064,GO:0006082,GO:0008150,GO:0008152,GO:0008198,GO:0008927,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0019585,GO:0019752,GO:0030145,GO:0032787,GO:0042839,GO:0042840,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046365,GO:0046395,GO:0046872,GO:0046914,GO:0071704,GO:0072329,GO:1901575 4.2.1.8 ko:K01686 ko00040,ko01100,map00040,map01100 M00061 R05606 RC00543 ko00000,ko00001,ko00002,ko01000 - - - UxuA LIIFOLDO_02517 435591.BDI_0377 6.38e-191 530.0 COG1028@1|root,COG1028@2|Bacteria,4NG8R@976|Bacteroidetes,2FMB9@200643|Bacteroidia,22WEJ@171551|Porphyromonadaceae 976|Bacteroidetes IQ KR domain uxuB - - - - - - - - - - - adh_short,adh_short_C2 LIIFOLDO_02518 435591.BDI_0378 3.17e-260 712.0 COG1609@1|root,COG1609@2|Bacteria,4NE81@976|Bacteroidetes,2FN0D@200643|Bacteroidia,22WVG@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn _helix lactose operon repressor - - - ko:K02529 - - - - ko00000,ko03000 - - - LacI,Peripla_BP_4 LIIFOLDO_02519 435591.BDI_0379 6.87e-137 388.0 COG5473@1|root,COG5473@2|Bacteria,4PMV7@976|Bacteroidetes,2FVN3@200643|Bacteroidia,22YW8@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_02520 435591.BDI_0380 1.09e-274 753.0 COG0845@1|root,COG0845@2|Bacteria,4NEXN@976|Bacteroidetes,2FQ1C@200643|Bacteroidia,22VVY@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family mtrC - - ko:K03585 ko01501,ko01503,map01501,map01503 M00646,M00647,M00699,M00718 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 2.A.6.2,8.A.1.6 - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 LIIFOLDO_02521 411477.PARMER_03581 0.0 1871.0 COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,2FM3B@200643|Bacteroidia,22WZM@171551|Porphyromonadaceae 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family mexF - - ko:K03296 - - - - ko00000 2.A.6.2 - - ACR_tran LIIFOLDO_02522 435591.BDI_0383 3.34e-315 860.0 COG1538@1|root,COG1538@2|Bacteria,4NDZK@976|Bacteroidetes,2FND5@200643|Bacteroidia,22W3J@171551|Porphyromonadaceae 976|Bacteroidetes MU Efflux transporter, outer membrane factor - - - - - - - - - - - - OEP LIIFOLDO_02523 435591.BDI_0384 6.42e-163 458.0 COG1043@1|root,COG1043@2|Bacteria,4NN2E@976|Bacteroidetes,2FMA1@200643|Bacteroidia,22VX4@171551|Porphyromonadaceae 976|Bacteroidetes M Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell lpxA2 - 2.3.1.129 ko:K00677 ko00540,ko01100,ko01503,map00540,map01100,map01503 M00060 R04567 RC00039,RC00055 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Acetyltransf_11,Hexapep LIIFOLDO_02526 435591.BDI_0386 1.79e-50 159.0 COG4974@1|root,COG4974@2|Bacteria 2|Bacteria L Belongs to the 'phage' integrase family - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_4,Phage_int_SAM_5,Phage_integrase LIIFOLDO_02527 435591.BDI_0388 2.72e-163 459.0 COG1672@1|root,COG1672@2|Bacteria,4P115@976|Bacteroidetes,2FVAN@200643|Bacteroidia,22Z7Y@171551|Porphyromonadaceae 976|Bacteroidetes S PFAM Archaeal ATPase - - - - - - - - - - - - - LIIFOLDO_02528 435591.BDI_0389 4.85e-184 514.0 COG0039@1|root,COG0039@2|Bacteria,4NEJ7@976|Bacteroidetes,2FM7E@200643|Bacteroidia,22WCV@171551|Porphyromonadaceae 976|Bacteroidetes C Catalyzes the reversible oxidation of malate to oxaloacetate mdh - 1.1.1.37 ko:K00024 ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00012,M00168,M00173,M00346,M00374,M00620,M00740 R00342,R07136 RC00031 ko00000,ko00001,ko00002,ko01000 - - - Ldh_1_C,Ldh_1_N LIIFOLDO_02530 435591.BDI_0344 1.74e-167 469.0 COG1376@1|root,COG1376@2|Bacteria,4NNMF@976|Bacteroidetes,2G38I@200643|Bacteroidia,2320S@171551|Porphyromonadaceae 976|Bacteroidetes S L,D-transpeptidase catalytic domain - - - - - - - - - - - - YkuD_2 LIIFOLDO_02531 435591.BDI_0343 2.18e-244 671.0 COG1376@1|root,COG1376@2|Bacteria,4NHZG@976|Bacteroidetes,2FN2P@200643|Bacteroidia,22X9Y@171551|Porphyromonadaceae 976|Bacteroidetes S L,D-transpeptidase catalytic domain - - - - - - - - - - - - YkuD LIIFOLDO_02532 435591.BDI_0342 1.31e-268 734.0 COG3274@1|root,COG3274@2|Bacteria,4NP3U@976|Bacteroidetes,2FN6D@200643|Bacteroidia,22XW5@171551|Porphyromonadaceae 976|Bacteroidetes S Acyltransferase family - - - - - - - - - - - - Acyl_transf_3 LIIFOLDO_02533 435591.BDI_0341 3.27e-118 338.0 COG3247@1|root,COG3247@2|Bacteria,4NTTU@976|Bacteroidetes,2FP3S@200643|Bacteroidia,22YEM@171551|Porphyromonadaceae 976|Bacteroidetes S Short repeat of unknown function (DUF308) - - - - - - - - - - - - DUF308 LIIFOLDO_02534 435591.BDI_0340 1.16e-213 590.0 COG2207@1|root,COG2207@2|Bacteria,4NSRE@976|Bacteroidetes,2G2T9@200643|Bacteroidia,231YE@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix, arabinose operon control protein - - - - - - - - - - - - HTH_18 LIIFOLDO_02535 435591.BDI_0339 3.2e-138 391.0 COG1309@1|root,COG1309@2|Bacteria,4NQ99@976|Bacteroidetes,2FMT3@200643|Bacteroidia,22YJI@171551|Porphyromonadaceae 976|Bacteroidetes K Bacterial regulatory proteins, tetR family - - - - - - - - - - - - TetR_N LIIFOLDO_02536 435591.BDI_0338 0.0 889.0 COG1538@1|root,COG1538@2|Bacteria,4NF4X@976|Bacteroidetes,2FN2J@200643|Bacteroidia,22WEM@171551|Porphyromonadaceae 976|Bacteroidetes MU outer membrane efflux protein - - - - - - - - - - - - OEP LIIFOLDO_02537 435591.BDI_0337 1.06e-236 652.0 COG0845@1|root,COG0845@2|Bacteria,4NF23@976|Bacteroidetes,2FMQJ@200643|Bacteroidia,22VUK@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K03585 ko01501,ko01503,map01501,map01503 M00646,M00647,M00699,M00718 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 2.A.6.2,8.A.1.6 - - HlyD_D23 LIIFOLDO_02538 1122931.AUAE01000014_gene1894 0.0 1698.0 COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,2FM3B@200643|Bacteroidia,22VY6@171551|Porphyromonadaceae 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family czcA - - ko:K03296 - - - - ko00000 2.A.6.2 - - ACR_tran LIIFOLDO_02539 999419.HMPREF1077_01015 7.93e-60 184.0 COG0347@1|root,COG0347@2|Bacteria,4NSBG@976|Bacteroidetes,2FT39@200643|Bacteroidia,22YG9@171551|Porphyromonadaceae 976|Bacteroidetes E COG NOG19114 non supervised orthologous group - - - - - - - - - - - - - LIIFOLDO_02540 411477.PARMER_04017 1.04e-256 708.0 COG1902@1|root,COG1902@2|Bacteria,4NF98@976|Bacteroidetes,2FNNA@200643|Bacteroidia,22W6P@171551|Porphyromonadaceae 976|Bacteroidetes C NADH:flavin oxidoreductase / NADH oxidase family namA - - - - - - - - - - - Oxidored_FMN LIIFOLDO_02541 435591.BDI_0334 5.9e-188 522.0 COG0300@1|root,COG0300@2|Bacteria,4NIAI@976|Bacteroidetes,2FRZY@200643|Bacteroidia,22XM7@171551|Porphyromonadaceae 976|Bacteroidetes S KR domain - - - ko:K07124 - - - - ko00000 - - - adh_short LIIFOLDO_02542 435591.BDI_0333 1.72e-130 371.0 COG1825@1|root,COG1825@2|Bacteria,4NEN6@976|Bacteroidetes,2FN3J@200643|Bacteroidia,22XPV@171551|Porphyromonadaceae 976|Bacteroidetes J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance ctc - - ko:K02897 ko03010,map03010 M00178 - - ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L25p,Ribosomal_TL5_C LIIFOLDO_02543 435591.BDI_0332 6.57e-136 384.0 COG0193@1|root,COG0193@2|Bacteria,4NI7N@976|Bacteroidetes,2FN36@200643|Bacteroidia,22VZX@171551|Porphyromonadaceae 976|Bacteroidetes J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis pth - 3.1.1.29 ko:K01056 - - - - ko00000,ko01000,ko03012 - - - Pept_tRNA_hydro LIIFOLDO_02544 435591.BDI_0331 1.05e-97 284.0 COG1188@1|root,COG1188@2|Bacteria,4NP8I@976|Bacteroidetes,2FRYM@200643|Bacteroidia,22Y0I@171551|Porphyromonadaceae 976|Bacteroidetes J S4 domain protein hslR - - ko:K04762 - - - - ko00000,ko03110 - - - S4 LIIFOLDO_02545 435591.BDI_0330 4.54e-40 139.0 COG2849@1|root,COG2849@2|Bacteria,4NUDS@976|Bacteroidetes,2FTTJ@200643|Bacteroidia,22Z1M@171551|Porphyromonadaceae 976|Bacteroidetes S MORN repeat variant - - - - - - - - - - - - MORN_2 LIIFOLDO_02546 435591.BDI_0329 0.0 1069.0 COG5492@1|root,COG5492@2|Bacteria,4NH7Q@976|Bacteroidetes,2FN1I@200643|Bacteroidia,22WZ6@171551|Porphyromonadaceae 976|Bacteroidetes N COG NOG06100 non supervised orthologous group - - - - - - - - - - - - TIG LIIFOLDO_02547 435591.BDI_2562 1.39e-18 100.0 2DUTV@1|root,33S7W@2|Bacteria,4P1VI@976|Bacteroidetes,2FWJJ@200643|Bacteroidia,22ZT0@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_02548 435591.BDI_3365 0.0 1372.0 COG5373@1|root,COG5373@2|Bacteria,4NGKV@976|Bacteroidetes,2FQAH@200643|Bacteroidia,22XH1@171551|Porphyromonadaceae 976|Bacteroidetes S Predicted membrane protein (DUF2339) - - - - - - - - - - - - DUF2339 LIIFOLDO_02549 435591.BDI_3366 3.39e-313 852.0 COG0770@1|root,COG0770@2|Bacteria,4NDWD@976|Bacteroidetes,2FN92@200643|Bacteroidia,22WG2@171551|Porphyromonadaceae 976|Bacteroidetes M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein murF - 6.3.2.10 ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 - R04573,R04617 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Mur_ligase,Mur_ligase_C,Mur_ligase_M LIIFOLDO_02550 435591.BDI_3367 7.49e-199 551.0 COG0294@1|root,COG0294@2|Bacteria,4NEYJ@976|Bacteroidetes,2FN1T@200643|Bacteroidia,22W9X@171551|Porphyromonadaceae 976|Bacteroidetes H dihydropteroate synthase folP - 2.5.1.15 ko:K00796 ko00790,ko01100,map00790,map01100 M00126,M00841 R03066,R03067 RC00121,RC00842 ko00000,ko00001,ko00002,ko01000 - - - Pterin_bind LIIFOLDO_02551 435591.BDI_3368 9.29e-179 498.0 COG1624@1|root,COG1624@2|Bacteria,4NG3Z@976|Bacteroidetes,2FN6K@200643|Bacteroidia,22WS7@171551|Porphyromonadaceae 976|Bacteroidetes S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria dacA - - - - - - - - - - - DisA_N LIIFOLDO_02552 435591.BDI_3369 5.04e-233 642.0 COG0280@1|root,COG0280@2|Bacteria,4NGX5@976|Bacteroidetes,2FMKY@200643|Bacteroidia,22X9D@171551|Porphyromonadaceae 976|Bacteroidetes C Phosphotransacetylase pta - 2.3.1.8 ko:K00625,ko:K13788 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 M00357,M00579 R00230,R00921 RC00004,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000 - - - AAA_26,DRTGG,PTA_PTB LIIFOLDO_02553 435591.BDI_3370 2.99e-291 795.0 COG0282@1|root,COG0282@2|Bacteria,4NFI0@976|Bacteroidetes,2FN9W@200643|Bacteroidia,22WNE@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction ackA - 2.7.2.1 ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 M00357,M00579 R00315,R01353 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 - - - Acetate_kinase LIIFOLDO_02554 1122931.AUAE01000012_gene2305 8.64e-163 456.0 COG0528@1|root,COG0528@2|Bacteria,4NE8Z@976|Bacteroidetes,2FMES@200643|Bacteroidia,22WRK@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the reversible phosphorylation of UMP to UDP pyrH - 2.7.4.22 ko:K09903 ko00240,ko01100,map00240,map01100 - R00158 RC00002 ko00000,ko00001,ko01000 - - - AA_kinase LIIFOLDO_02555 435591.BDI_3372 0.0 1684.0 COG0745@1|root,COG1879@1|root,COG4977@1|root,COG5002@1|root,COG0745@2|Bacteria,COG1879@2|Bacteria,COG4977@2|Bacteria,COG5002@2|Bacteria,4P0IA@976|Bacteroidetes,2FWSR@200643|Bacteroidia,22Z9K@171551|Porphyromonadaceae 976|Bacteroidetes T Periplasmic binding proteins and sugar binding domain of LacI family - - - - - - - - - - - - HATPase_c,HTH_18,HTH_AraC,HisKA,Peripla_BP_4,Reg_prop,Response_reg,Y_Y_Y LIIFOLDO_02556 435591.BDI_3373 0.0 1212.0 COG1621@1|root,COG1621@2|Bacteria,4NEYI@976|Bacteroidetes,2FM1Y@200643|Bacteroidia,22ZM7@171551|Porphyromonadaceae 976|Bacteroidetes G Psort location Cytoplasmic, score sacC - 3.2.1.80 ko:K03332 ko00051,map00051 - R00879 - ko00000,ko00001,ko01000 - - - DUF4980,Glyco_hydro_32C,Glyco_hydro_32N LIIFOLDO_02557 435591.BDI_3374 5.32e-209 577.0 COG0524@1|root,COG0524@2|Bacteria,4NGFK@976|Bacteroidetes,2FN72@200643|Bacteroidia,22WT2@171551|Porphyromonadaceae 976|Bacteroidetes G pfkB family - - 2.7.1.4 ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 - R00760,R00867,R03920 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PfkB LIIFOLDO_02558 435591.BDI_0814 2.67e-238 660.0 COG1797@1|root,COG1797@2|Bacteria,4NF1V@976|Bacteroidetes,2FNW5@200643|Bacteroidia,22W4X@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source cbiA - 6.3.5.11,6.3.5.9 ko:K02224 ko00860,ko01100,ko01120,map00860,map01100,map01120 - R05224,R05815 RC00010,RC01301 ko00000,ko00001,ko01000 - - - AAA_26,CbiA,GATase_3 LIIFOLDO_02559 435591.BDI_0814 6.04e-85 261.0 COG1797@1|root,COG1797@2|Bacteria,4NF1V@976|Bacteroidetes,2FNW5@200643|Bacteroidia,22W4X@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source cbiA - 6.3.5.11,6.3.5.9 ko:K02224 ko00860,ko01100,ko01120,map00860,map01100,map01120 - R05224,R05815 RC00010,RC01301 ko00000,ko00001,ko01000 - - - AAA_26,CbiA,GATase_3 LIIFOLDO_02560 435591.BDI_0815 6.69e-149 419.0 COG0572@1|root,COG0572@2|Bacteria,4NEEC@976|Bacteroidetes,2FNW6@200643|Bacteroidia,22XE7@171551|Porphyromonadaceae 976|Bacteroidetes F uridine kinase udk - 2.7.1.48 ko:K00876 ko00240,ko00983,ko01100,map00240,map00983,map01100 - R00513,R00516,R00517,R00962,R00964,R00967,R00968,R00970,R01548,R01549,R01880,R02091,R02096,R02097,R02327,R02332,R02371,R02372,R08232 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PRK LIIFOLDO_02561 435591.BDI_0816 4.87e-163 456.0 COG3637@1|root,COG3637@2|Bacteria,4NQBX@976|Bacteroidetes,2G3BC@200643|Bacteroidia,22Y6M@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl_2 LIIFOLDO_02562 435591.BDI_0817 0.0 1180.0 COG0683@1|root,COG1388@1|root,COG0683@2|Bacteria,COG1388@2|Bacteria,4NG96@976|Bacteroidetes,2FNR1@200643|Bacteroidia,22WGX@171551|Porphyromonadaceae 976|Bacteroidetes M Lysin motif lysM - - - - - - - - - - - ANF_receptor,LysM,Peripla_BP_6 LIIFOLDO_02563 435591.BDI_0818 0.0 901.0 COG3291@1|root,COG3291@2|Bacteria,4NU2U@976|Bacteroidetes,2FNZM@200643|Bacteroidia,22XX6@171551|Porphyromonadaceae 976|Bacteroidetes S C-terminal domain of CHU protein family - - - - - - - - - - - - CHU_C LIIFOLDO_02564 435591.BDI_0819 2.16e-238 655.0 COG0741@1|root,COG0741@2|Bacteria,4NH4W@976|Bacteroidetes,2FM9R@200643|Bacteroidia,22W65@171551|Porphyromonadaceae 976|Bacteroidetes M Transglycosylase SLT domain mltD_2 - - - - - - - - - - - SLT LIIFOLDO_02565 435591.BDI_0820 1.62e-230 634.0 COG2066@1|root,COG2066@2|Bacteria,4NERJ@976|Bacteroidetes,2FM3D@200643|Bacteroidia,22WTN@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the glutaminase family glsA GO:0003674,GO:0003824,GO:0004359,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006543,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009064,GO:0009065,GO:0009084,GO:0009987,GO:0016053,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0046394,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607 3.5.1.2 ko:K01425 ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230 - R00256,R01579 RC00010,RC02798 ko00000,ko00001,ko01000 - - - Glutaminase LIIFOLDO_02566 435591.BDI_0821 0.0 983.0 COG0076@1|root,COG0076@2|Bacteria,4NJ2F@976|Bacteroidetes,2FNM0@200643|Bacteroidia,22WZ2@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the group II decarboxylase family gadB - 4.1.1.15,4.1.2.27 ko:K01580,ko:K01634 ko00250,ko00410,ko00430,ko00600,ko00650,ko01100,ko01110,ko01120,ko02024,ko04071,ko04727,ko04940,map00250,map00410,map00430,map00600,map00650,map01100,map01110,map01120,map02024,map04071,map04727,map04940 M00027,M00100 R00261,R00489,R01682,R02464,R02466,R06516 RC00264,RC00299,RC00721,RC01266 ko00000,ko00001,ko00002,ko01000 - - - Pyridoxal_deC LIIFOLDO_02567 435591.BDI_0822 6.14e-279 764.0 COG2807@1|root,COG2807@2|Bacteria,4NHUR@976|Bacteroidetes,2FMD3@200643|Bacteroidia,22WZH@171551|Porphyromonadaceae 976|Bacteroidetes P Major Facilitator Superfamily - - - - - - - - - - - - MFS_1 LIIFOLDO_02568 435591.BDI_0823 6.7e-210 581.0 COG0697@1|root,COG0697@2|Bacteria,4NG65@976|Bacteroidetes,2FN22@200643|Bacteroidia,22ZQV@171551|Porphyromonadaceae 976|Bacteroidetes EG EamA-like transporter family - - - - - - - - - - - - EamA LIIFOLDO_02570 435591.BDI_0824 2.86e-123 350.0 COG0454@1|root,COG0456@2|Bacteria,4NQVT@976|Bacteroidetes,2FPFH@200643|Bacteroidia,22YJN@171551|Porphyromonadaceae 976|Bacteroidetes K Acetyltransferase (GNAT) domain paiA - - - - - - - - - - - Acetyltransf_1,Acetyltransf_10 LIIFOLDO_02571 435591.BDI_0825 6.18e-109 317.0 COG1390@1|root,COG1390@2|Bacteria,4NP16@976|Bacteroidetes,2FMD8@200643|Bacteroidia,22Y2E@171551|Porphyromonadaceae 976|Bacteroidetes C subunit E - - - ko:K02121 ko00190,ko01100,map00190,map01100 M00159 - - ko00000,ko00001,ko00002 3.A.2.2,3.A.2.3 - - vATP-synt_E LIIFOLDO_02572 435591.BDI_0826 1.12e-211 584.0 COG1527@1|root,COG1527@2|Bacteria,4NMSU@976|Bacteroidetes,2G2KA@200643|Bacteroidia,22Y3R@171551|Porphyromonadaceae 976|Bacteroidetes C Protein of unknown function (DUF2764) - - - - - - - - - - - - DUF2764 LIIFOLDO_02573 435591.BDI_0827 0.0 1070.0 COG1155@1|root,COG1155@2|Bacteria,4NIB6@976|Bacteroidetes,2FMQ6@200643|Bacteroidia,22WQG@171551|Porphyromonadaceae 976|Bacteroidetes C Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit atpA - 3.6.3.14,3.6.3.15 ko:K02117 ko00190,ko01100,map00190,map01100 M00159 - - ko00000,ko00001,ko00002,ko01000 3.A.2.2,3.A.2.3 - - ATP-synt_ab,ATP-synt_ab_N,ATP-synt_ab_Xtn LIIFOLDO_02574 435591.BDI_0828 5.66e-313 853.0 COG1156@1|root,COG1156@2|Bacteria,4NIH8@976|Bacteroidetes,2FNPF@200643|Bacteroidia,22WY4@171551|Porphyromonadaceae 976|Bacteroidetes C the B subunit is part of the catalytic core of the ATP synthase complex ntpB - - ko:K02118 ko00190,ko01100,map00190,map01100 M00159 - - ko00000,ko00001,ko00002 3.A.2.2,3.A.2.3 - - ATP-synt_ab,ATP-synt_ab_N LIIFOLDO_02575 435591.BDI_0357 0.0 870.0 COG1295@1|root,COG1295@2|Bacteria,4NH0H@976|Bacteroidetes,2FP7P@200643|Bacteroidia,22WV5@171551|Porphyromonadaceae 976|Bacteroidetes S ribonuclease BN yihY - - ko:K07058 - - - - ko00000 - - - Virul_fac_BrkB LIIFOLDO_02576 435591.BDI_0356 6.57e-314 856.0 COG0534@1|root,COG0534@2|Bacteria,4NDUF@976|Bacteroidetes,2G334@200643|Bacteroidia,22XIB@171551|Porphyromonadaceae 976|Bacteroidetes V Polysaccharide biosynthesis C-terminal domain - - - - - - - - - - - - MatE LIIFOLDO_02578 435591.BDI_0354 4.38e-72 216.0 2E3D8@1|root,32YCF@2|Bacteria,4NUPM@976|Bacteroidetes,2FT2V@200643|Bacteroidia,22YI6@171551|Porphyromonadaceae 976|Bacteroidetes S MerR HTH family regulatory protein - - - - - - - - - - - - MerR_2 LIIFOLDO_02579 435591.BDI_0353 2.61e-207 574.0 COG0484@1|root,COG0484@2|Bacteria,4NE4X@976|Bacteroidetes,2FP5X@200643|Bacteroidia,22WQ4@171551|Porphyromonadaceae 976|Bacteroidetes O DnaJ molecular chaperone homology domain dnaJ2 - - ko:K03686,ko:K05516 - - - - ko00000,ko03029,ko03036,ko03110 - - - DnaJ,DnaJ_C LIIFOLDO_02580 435591.BDI_0352 1e-141 400.0 COG0307@1|root,COG0307@2|Bacteria,4NHI8@976|Bacteroidetes,2FNEF@200643|Bacteroidia,22W5P@171551|Porphyromonadaceae 976|Bacteroidetes H riboflavin synthase subunit alpha ribE - 2.5.1.9 ko:K00793 ko00740,ko01100,ko01110,map00740,map01100,map01110 M00125 R00066 RC00958,RC00960 ko00000,ko00001,ko00002,ko01000 - - - Lum_binding LIIFOLDO_02581 435591.BDI_0351 2.37e-249 684.0 COG2768@1|root,COG2768@2|Bacteria,4NGYC@976|Bacteroidetes,2FPAI@200643|Bacteroidia,22X1P@171551|Porphyromonadaceae 976|Bacteroidetes C Domain of unknown function (DUF362) - - - ko:K07138 - - - - ko00000 - - - DUF362 LIIFOLDO_02582 435591.BDI_0350 1.34e-259 710.0 COG3049@1|root,COG3049@2|Bacteria,4NGDB@976|Bacteroidetes,2FPJ2@200643|Bacteroidia,22WSC@171551|Porphyromonadaceae 976|Bacteroidetes M Linear amide C-N hydrolases, choloylglycine hydrolase family - - 3.5.1.24 ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 - R02797,R03975,R03977,R04486,R04487,R05835 RC00090,RC00096 ko00000,ko00001,ko01000 - - - CBAH LIIFOLDO_02583 999419.HMPREF1077_03603 3.73e-46 166.0 COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,2FN9Q@200643|Bacteroidia,22WY9@171551|Porphyromonadaceae 976|Bacteroidetes V FtsX-like permease family - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD LIIFOLDO_02584 1235803.C825_05258 1.14e-180 539.0 COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,2FN9Q@200643|Bacteroidia 976|Bacteroidetes V Efflux ABC transporter, permease protein - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD LIIFOLDO_02585 435591.BDI_0349 0.0 1447.0 COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,2FPEN@200643|Bacteroidia,22X01@171551|Porphyromonadaceae 976|Bacteroidetes V ABC transporter permease - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD LIIFOLDO_02586 435591.BDI_0348 0.0 1561.0 COG0577@1|root,COG0577@2|Bacteria,4NFGD@976|Bacteroidetes,2FNP6@200643|Bacteroidia,22VZ8@171551|Porphyromonadaceae 976|Bacteroidetes V FtsX-like permease family - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD LIIFOLDO_02587 435591.BDI_0347 6.37e-253 699.0 COG0845@1|root,COG0845@2|Bacteria,4NDUH@976|Bacteroidetes,2FM9Q@200643|Bacteroidia,22W2T@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K02005 - - - - ko00000 - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 LIIFOLDO_02588 435591.BDI_0346 1.67e-308 842.0 COG1538@1|root,COG1538@2|Bacteria,4NJ4M@976|Bacteroidetes,2FN0S@200643|Bacteroidia,22WDV@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 M00325,M00326,M00339,M00571,M00575,M00646,M00647,M00696,M00697,M00709,M00720,M00821 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 1.B.17,2.A.6.2 - - OEP LIIFOLDO_02589 435591.BDI_2550 0.0 1486.0 COG0317@1|root,COG0317@2|Bacteria,4NESY@976|Bacteroidetes,2FMEE@200643|Bacteroidia,22VYB@171551|Porphyromonadaceae 976|Bacteroidetes KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance relA - 2.7.6.5 ko:K00951 ko00230,map00230 - R00429 RC00002,RC00078 ko00000,ko00001,ko01000 - - - ACT_4,HD_4,RelA_SpoT,TGS LIIFOLDO_02590 435591.BDI_2551 9.78e-107 308.0 COG1522@1|root,COG1522@2|Bacteria,4NNH2@976|Bacteroidetes,2FS1F@200643|Bacteroidia,22XNH@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix ASNC type lrp - - ko:K03719,ko:K05800 - - - - ko00000,ko03000,ko03036 - - - AsnC_trans_reg,HTH_24 LIIFOLDO_02591 435591.BDI_2552 5.18e-309 842.0 COG2873@1|root,COG2873@2|Bacteria,4NE27@976|Bacteroidetes,2FMQX@200643|Bacteroidia,22WIS@171551|Porphyromonadaceae 976|Bacteroidetes E O-acetylhomoserine aminocarboxypropyltransferase metY - 2.5.1.49 ko:K01740 ko00270,ko01100,map00270,map01100 - R01287,R04859 RC00020,RC02821,RC02848 ko00000,ko00001,ko01000 - - - Cys_Met_Meta_PP LIIFOLDO_02592 435591.BDI_2553 1.48e-85 252.0 2E81Z@1|root,332G1@2|Bacteria,4NX31@976|Bacteroidetes,2FSJB@200643|Bacteroidia,22YPD@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG30654 non supervised orthologous group - - - - - - - - - - - - - LIIFOLDO_02593 435591.BDI_2554 7.72e-178 495.0 COG3279@1|root,COG3279@2|Bacteria,4NGBF@976|Bacteroidetes,2FMKB@200643|Bacteroidia,22WPQ@171551|Porphyromonadaceae 976|Bacteroidetes T LytTr DNA-binding domain - - - ko:K02477 - - - - ko00000,ko02022 - - - LytTR,Response_reg LIIFOLDO_02594 435591.BDI_2555 2.25e-241 663.0 COG2972@1|root,COG2972@2|Bacteria,4NFDP@976|Bacteroidetes,2FPUC@200643|Bacteroidia,22WCU@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase - - - - - - - - - - - - His_kinase LIIFOLDO_02595 435591.BDI_2556 0.0 986.0 COG0741@1|root,COG1388@1|root,COG0741@2|Bacteria,COG1388@2|Bacteria,4NEKW@976|Bacteroidetes,2FM5V@200643|Bacteroidia,22VZV@171551|Porphyromonadaceae 976|Bacteroidetes M transglycosylase mltD - - ko:K08307 - - - - ko00000,ko01000,ko01011 - - - LysM,SLT LIIFOLDO_02596 435591.BDI_2557 1.69e-169 473.0 28PR3@1|root,31KKX@2|Bacteria,4NQPF@976|Bacteroidetes,2FSHR@200643|Bacteroidia,22Y55@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location CytoplasmicMembrane, score - - - - - - - - - - - - - LIIFOLDO_02597 435591.BDI_2558 6.63e-201 557.0 COG1475@1|root,COG1475@2|Bacteria,4NFZ9@976|Bacteroidetes,2FP81@200643|Bacteroidia,22WNK@171551|Porphyromonadaceae 976|Bacteroidetes K Belongs to the ParB family parB - - ko:K03497 - - - - ko00000,ko03000,ko03036,ko04812 - - - ParBc LIIFOLDO_02598 435591.BDI_2559 2.48e-178 497.0 COG1192@1|root,COG1192@2|Bacteria,4NFEX@976|Bacteroidetes,2FMX2@200643|Bacteroidia,22W77@171551|Porphyromonadaceae 976|Bacteroidetes D Chromosome partitioning protein ParA soj - - ko:K03496 - - - - ko00000,ko03036,ko04812 - - - AAA_31 LIIFOLDO_02599 435591.BDI_2560 8.4e-102 294.0 2ESPQ@1|root,33K86@2|Bacteria,4P3QC@976|Bacteroidetes,2FSRQ@200643|Bacteroidia,230VM@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_02600 435591.BDI_2562 0.0 2122.0 2DUTV@1|root,33S7W@2|Bacteria,4P1VI@976|Bacteroidetes,2FWJJ@200643|Bacteroidia,22ZT0@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_02601 435591.BDI_0675 0.0 962.0 COG3303@1|root,COG3303@2|Bacteria,4NG0P@976|Bacteroidetes,2FP37@200643|Bacteroidia,22WUS@171551|Porphyromonadaceae 976|Bacteroidetes C Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process nrfA GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0006091,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015980,GO:0016491,GO:0016661,GO:0016662,GO:0019645,GO:0020037,GO:0022900,GO:0022904,GO:0030288,GO:0030313,GO:0031975,GO:0042279,GO:0042597,GO:0044237,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0097159,GO:0098809,GO:1901363 1.7.2.2 ko:K03385 ko00910,ko01120,ko05132,map00910,map01120,map05132 M00530 R05712 RC00176 ko00000,ko00001,ko00002,ko01000 - - - Cytochrom_C552 LIIFOLDO_02602 435591.BDI_0674 0.0 1499.0 COG0642@1|root,COG2984@1|root,COG2205@2|Bacteria,COG2984@2|Bacteria,4NRWS@976|Bacteroidetes,2G2UT@200643|Bacteroidia,231JY@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - ABC_sub_bind,HATPase_c,HisKA,PAS_3 LIIFOLDO_02603 435591.BDI_0673 5.28e-105 303.0 COG0013@1|root,COG0013@2|Bacteria,4NNPX@976|Bacteroidetes,2FTMB@200643|Bacteroidia,22Y13@171551|Porphyromonadaceae 976|Bacteroidetes J Threonyl and Alanyl tRNA synthetase second additional domain - - - - - - - - - - - - tRNA_SAD LIIFOLDO_02604 435591.BDI_0672 1.62e-293 802.0 COG0126@1|root,COG0126@2|Bacteria,4NFW2@976|Bacteroidetes,2FM2Q@200643|Bacteroidia,22WBD@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the phosphoglycerate kinase family pgk - 2.7.2.3 ko:K00927 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003,M00165,M00166,M00308,M00552 R01512 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000,ko04147 - - - PGK LIIFOLDO_02605 1235803.C825_04887 0.0 897.0 COG1523@1|root,COG1523@2|Bacteria,4NIH2@976|Bacteroidetes,2FKZS@200643|Bacteroidia,22WK9@171551|Porphyromonadaceae 976|Bacteroidetes G Carbohydrate-binding module 48 (Isoamylase N-terminal domain) - - 3.2.1.41 ko:K01200 ko00500,ko01100,ko01110,map00500,map01100,map01110 - R02111 - ko00000,ko00001,ko01000 - CBM48,GH13 - Alpha-amylase,CBM_48,DUF3372 LIIFOLDO_02606 435591.BDI_0669 0.0 967.0 COG0305@1|root,COG0305@2|Bacteria,4NF8P@976|Bacteroidetes,2FNG7@200643|Bacteroidia,22XCZ@171551|Porphyromonadaceae 976|Bacteroidetes L Participates in initiation and elongation during chromosome replication dnaB - 3.6.4.12 ko:K02314 ko03030,ko04112,map03030,map04112 - - - ko00000,ko00001,ko01000,ko03032 - - - DnaB,DnaB_C LIIFOLDO_02608 435591.BDI_0667 7.94e-220 606.0 COG0598@1|root,COG0598@2|Bacteria,4NGM7@976|Bacteroidetes,2FNKU@200643|Bacteroidia,22WPX@171551|Porphyromonadaceae 976|Bacteroidetes P Transporter corA - - ko:K03284 - - - - ko00000,ko02000 1.A.35.1,1.A.35.3 - - CorA LIIFOLDO_02609 435591.BDI_0666 0.0 1564.0 COG3537@1|root,COG3537@2|Bacteria,4NDYB@976|Bacteroidetes,2FMQP@200643|Bacteroidia,22W3X@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 LIIFOLDO_02610 435591.BDI_0665 0.0 1489.0 COG3525@1|root,COG3525@2|Bacteria,4NE08@976|Bacteroidetes,2FNFR@200643|Bacteroidia,22XGQ@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 20, catalytic domain - - 3.2.1.52 ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 M00079 R00022,R06004,R11316 RC00049 ko00000,ko00001,ko00002,ko01000,ko03110 - GH20 - CHB_HEX_C_1,F5_F8_type_C,Fn3_assoc,Glyco_hydro_20,Glyco_hydro_20b LIIFOLDO_02612 435591.BDI_0586 1.05e-178 498.0 COG0159@1|root,COG0159@2|Bacteria,4NE21@976|Bacteroidetes,2FPFP@200643|Bacteroidia,22W9T@171551|Porphyromonadaceae 976|Bacteroidetes E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate trpA - 4.2.1.20 ko:K01695 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 M00023 R00674,R02340,R02722 RC00209,RC00210,RC00700,RC00701,RC02868 ko00000,ko00001,ko00002,ko01000 - - - Trp_syntA LIIFOLDO_02613 435591.BDI_0587 5.49e-163 455.0 COG0135@1|root,COG0135@2|Bacteria,4NNQ1@976|Bacteroidetes,2FPJD@200643|Bacteroidia,22Y2M@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the TrpF family trpF - 5.3.1.24 ko:K01817 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00023 R03509 RC00945 ko00000,ko00001,ko00002,ko01000 - - - PRAI LIIFOLDO_02614 435591.BDI_0588 7.66e-180 501.0 COG0134@1|root,COG0134@2|Bacteria,4NFJT@976|Bacteroidetes,2FN9T@200643|Bacteroidia,22WM1@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the TrpC family trpC GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48 ko:K01609 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00023 R03508 RC00944 ko00000,ko00001,ko00002,ko01000 - - - IGPS LIIFOLDO_02615 435591.BDI_0589 6.43e-238 654.0 COG0547@1|root,COG0547@2|Bacteria,4NH2J@976|Bacteroidetes,2FPE1@200643|Bacteroidia,22W61@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) trpD GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 ko:K00766,ko:K13497 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00023 R00985,R00986,R01073 RC00010,RC00440,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000 - - - Glycos_trans_3N,Glycos_transf_3 LIIFOLDO_02616 435591.BDI_0590 3.51e-136 385.0 COG0512@1|root,COG0512@2|Bacteria,4NE4I@976|Bacteroidetes,2FM5F@200643|Bacteroidia,22XQD@171551|Porphyromonadaceae 976|Bacteroidetes EH Glutamine amidotransferase class-I trpG - 2.6.1.85,4.1.3.27 ko:K01658,ko:K01664 ko00400,ko00405,ko00790,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map00790,map01100,map01110,map01130,map01230,map02024,map02025 M00023 R00985,R00986,R01716 RC00010,RC01418,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000 - - - GATase LIIFOLDO_02617 435591.BDI_0591 0.0 937.0 COG0147@1|root,COG0147@2|Bacteria,4NFQ5@976|Bacteroidetes,2FN6I@200643|Bacteroidia,22XAQ@171551|Porphyromonadaceae 976|Bacteroidetes EH Anthranilate synthase component I, N terminal region trpE - 4.1.3.27 ko:K01657 ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 M00023 R00985,R00986 RC00010,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000 - - - Anth_synt_I_N,Chorismate_bind LIIFOLDO_02618 435591.BDI_0592 1.04e-288 788.0 COG0133@1|root,COG0133@2|Bacteria,4NDWP@976|Bacteroidetes,2FP09@200643|Bacteroidia,22VZ0@171551|Porphyromonadaceae 976|Bacteroidetes E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine trpB GO:0000162,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.20,5.3.1.24 ko:K01696,ko:K01817 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 M00023 R00674,R02340,R02722,R03509 RC00209,RC00210,RC00700,RC00701,RC00945,RC02868 ko00000,ko00001,ko00002,ko01000 - - - PALP LIIFOLDO_02619 435591.BDI_0593 0.0 945.0 COG1027@1|root,COG1027@2|Bacteria,4P1PR@976|Bacteroidetes,2FNWI@200643|Bacteroidia,22VVR@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the formation of fumarate from aspartate aspA - 4.3.1.1 ko:K01744 ko00250,ko01100,map00250,map01100 - R00490 RC00316,RC02799 ko00000,ko00001,ko01000 - - - FumaraseC_C,Lyase_1 LIIFOLDO_02620 435591.BDI_0594 3.03e-230 633.0 COG1082@1|root,COG1082@2|Bacteria,4NJF7@976|Bacteroidetes,2G2TH@200643|Bacteroidia,231JP@171551|Porphyromonadaceae 976|Bacteroidetes G Xylose isomerase-like TIM barrel - - - - - - - - - - - - AP_endonuc_2 LIIFOLDO_02621 435591.BDI_0595 1.8e-130 370.0 COG1595@1|root,COG1595@2|Bacteria,4NNBY@976|Bacteroidetes,2FNGE@200643|Bacteroidia,231CS@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 LIIFOLDO_02622 435591.BDI_0596 3.29e-182 506.0 COG0588@1|root,COG0588@2|Bacteria,4NFP5@976|Bacteroidetes,2FP93@200643|Bacteroidia,22WIZ@171551|Porphyromonadaceae 976|Bacteroidetes G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate gpmA GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 M00001,M00002,M00003 R01518 RC00536 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 - - - His_Phos_1 LIIFOLDO_02623 435591.BDI_0597 2.04e-86 254.0 COG3189@1|root,COG3189@2|Bacteria,4NSFD@976|Bacteroidetes,2FT68@200643|Bacteroidia 976|Bacteroidetes S Protein of unknown function, DUF488 - - - - - - - - - - - - DUF488 LIIFOLDO_02624 435591.BDI_0598 6.41e-237 652.0 COG3712@1|root,COG3712@2|Bacteria,4NKN5@976|Bacteroidetes,2FNS3@200643|Bacteroidia,231UV@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR LIIFOLDO_02625 435591.BDI_0599 0.0 2121.0 COG1629@1|root,COG4774@1|root,COG4771@2|Bacteria,COG4774@2|Bacteria,4NDU8@976|Bacteroidetes,2FMRZ@200643|Bacteroidia,2322V@171551|Porphyromonadaceae 976|Bacteroidetes P CarboxypepD_reg-like domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_02626 435591.BDI_0180 0.0 867.0 COG2067@1|root,COG2067@2|Bacteria,4NEP1@976|Bacteroidetes,2FN33@200643|Bacteroidia,22W7P@171551|Porphyromonadaceae 976|Bacteroidetes I Psort location OuterMembrane, score - - - - - - - - - - - - Toluene_X LIIFOLDO_02627 435591.BDI_0181 0.0 899.0 COG0457@1|root,COG0457@2|Bacteria,4NF7U@976|Bacteroidetes,2FP0S@200643|Bacteroidia,22XHG@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat protein - - - - - - - - - - - - TPR_8 LIIFOLDO_02628 435591.BDI_0182 6.4e-143 404.0 COG3117@1|root,COG3117@2|Bacteria,4NRIN@976|Bacteroidetes,2FP9Z@200643|Bacteroidia,22Y9S@171551|Porphyromonadaceae 976|Bacteroidetes S Lipopolysaccharide-assembly, LptC-related - - - - - - - - - - - - LptC LIIFOLDO_02629 435591.BDI_0183 5.49e-282 773.0 COG1253@1|root,COG1253@2|Bacteria,4NG0I@976|Bacteroidetes,2FMR1@200643|Bacteroidia,22X0Y@171551|Porphyromonadaceae 976|Bacteroidetes S Hemolysin tlyC - - ko:K03699 - - - - ko00000,ko02042 - - - CBS,CorC_HlyC,DUF21 LIIFOLDO_02630 435591.BDI_0184 0.0 1342.0 COG0760@1|root,COG0760@2|Bacteria,4NDZZ@976|Bacteroidetes,2FN8C@200643|Bacteroidia,22W3C@171551|Porphyromonadaceae 976|Bacteroidetes O peptidylprolyl isomerase ppiD - 5.2.1.8 ko:K01802,ko:K03770 - - - - ko00000,ko01000,ko03110 - - - Rotamase_2,Rotamase_3,SurA_N_2 LIIFOLDO_02631 435591.BDI_0185 2.28e-248 681.0 COG0820@1|root,COG0820@2|Bacteria,4NFH5@976|Bacteroidetes,2FPJH@200643|Bacteroidia,22WJ0@171551|Porphyromonadaceae 976|Bacteroidetes J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs rlmN GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 ko:K06941 - - - - ko00000,ko01000,ko03009 - - - Fer4_14,Radical_SAM LIIFOLDO_02632 435591.BDI_0186 3.24e-249 684.0 COG0322@1|root,COG0322@2|Bacteria,4NGEV@976|Bacteroidetes,2FNVF@200643|Bacteroidia,22XZM@171551|Porphyromonadaceae 976|Bacteroidetes L Domain of unknown function (DUF4837) - - - - - - - - - - - - DUF4837 LIIFOLDO_02633 435591.BDI_0187 7.57e-267 730.0 COG1995@1|root,COG1995@2|Bacteria,4NEUR@976|Bacteroidetes,2FN0X@200643|Bacteroidia,22WSX@171551|Porphyromonadaceae 976|Bacteroidetes C Belongs to the PdxA family pdxA - 1.1.1.262 ko:K00097 ko00750,ko01100,map00750,map01100 M00124 R05681,R05837,R07406 RC00089,RC00675,RC01475 ko00000,ko00001,ko00002,ko01000 - - - PdxA LIIFOLDO_02634 435591.BDI_0188 6.39e-107 308.0 COG0615@1|root,COG0615@2|Bacteria,4NM8I@976|Bacteroidetes,2FS6T@200643|Bacteroidia,22XQH@171551|Porphyromonadaceae 976|Bacteroidetes IM Glycerol-3-phosphate cytidylyltransferase aepX - 2.7.7.15,2.7.7.39,5.4.2.9 ko:K00968,ko:K00980,ko:K01841 ko00440,ko00564,ko01100,ko01120,ko01130,ko05231,map00440,map00564,map01100,map01120,map01130,map05231 M00090 R00661,R00856,R01890,R02590 RC00002,RC02792 ko00000,ko00001,ko00002,ko01000 - - - CTP_transf_like,PEP_mutase LIIFOLDO_02635 435591.BDI_0189 3.41e-172 480.0 COG1028@1|root,COG1028@2|Bacteria,4NJKS@976|Bacteroidetes,2FQU2@200643|Bacteroidia,22XDC@171551|Porphyromonadaceae 976|Bacteroidetes IQ Dehydrogenase - - 1.1.1.100 ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 M00083,M00572 R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671 RC00029,RC00117 ko00000,ko00001,ko00002,ko01000,ko01004 - - - adh_short,adh_short_C2 LIIFOLDO_02636 435591.BDI_0190 2.85e-211 583.0 COG0558@1|root,COG0558@2|Bacteria,4NG8X@976|Bacteroidetes,2FQ5M@200643|Bacteroidia,22WXQ@171551|Porphyromonadaceae 976|Bacteroidetes I CDP-alcohol phosphatidyltransferase - - - - - - - - - - - - CDP-OH_P_transf,HAD_2 LIIFOLDO_02637 435591.BDI_0191 5.11e-204 563.0 COG0204@1|root,COG0204@2|Bacteria,4NF25@976|Bacteroidetes,2FSAD@200643|Bacteroidia,22XTQ@171551|Porphyromonadaceae 976|Bacteroidetes I Phosphate acyltransferases - - - - - - - - - - - - Acetyltransf_5,Acyltransferase LIIFOLDO_02638 435591.BDI_0192 1.3e-283 775.0 COG2204@1|root,COG2204@2|Bacteria,4NDWI@976|Bacteroidetes,2FMNM@200643|Bacteroidia,22WGW@171551|Porphyromonadaceae 976|Bacteroidetes K ATPase (AAA fhlA - - - - - - - - - - - HTH_8,Sigma54_activat LIIFOLDO_02639 435591.BDI_0193 2.05e-121 347.0 2CADI@1|root,32RR7@2|Bacteria,4NP51@976|Bacteroidetes,2FSVU@200643|Bacteroidia,22XZJ@171551|Porphyromonadaceae 976|Bacteroidetes S Lipopolysaccharide-assembly lptE - - - - - - - - - - - LptE LIIFOLDO_02640 435591.BDI_1633 0.0 1303.0 COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,2FN9Q@200643|Bacteroidia,22ZRB@171551|Porphyromonadaceae 976|Bacteroidetes V FtsX-like permease family - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD LIIFOLDO_02641 435591.BDI_1632 0.0 867.0 COG0786@1|root,COG0786@2|Bacteria,4NVPZ@976|Bacteroidetes,2FRCU@200643|Bacteroidia 976|Bacteroidetes E Sodium/glutamate symporter - - - ko:K03312 - - - - ko00000,ko02000 2.A.27 - - Glt_symporter LIIFOLDO_02642 435591.BDI_1631 9.32e-222 610.0 COG1917@1|root,COG4977@1|root,COG1917@2|Bacteria,COG4977@2|Bacteria,4NJ70@976|Bacteroidetes,2FRJS@200643|Bacteroidia,231GE@171551|Porphyromonadaceae 976|Bacteroidetes K AraC-like ligand binding domain - - - - - - - - - - - - AraC_binding,HTH_AraC LIIFOLDO_02643 435591.BDI_1630 6.72e-316 860.0 COG3387@1|root,COG3387@2|Bacteria,4NGFS@976|Bacteroidetes,2FQ2I@200643|Bacteroidia 976|Bacteroidetes G lipolytic protein G-D-S-L family - - - - - - - - - - - - GDE_C,Glyco_hydro_36 LIIFOLDO_02644 435591.BDI_1629 0.0 1209.0 COG1482@1|root,COG1482@2|Bacteria,4NF9A@976|Bacteroidetes,2FNY1@200643|Bacteroidia,22WHI@171551|Porphyromonadaceae 976|Bacteroidetes G mannose-6-phosphate isomerase, class I - - - - - - - - - - - - ROK LIIFOLDO_02645 435591.BDI_1628 6.93e-261 715.0 COG1940@1|root,COG1940@2|Bacteria,4NJPD@976|Bacteroidetes,2FP49@200643|Bacteroidia,22WIM@171551|Porphyromonadaceae 976|Bacteroidetes GK ROK family - - 2.7.1.2 ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 M00001,M00549 R00299,R01600,R01786 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - ROK LIIFOLDO_02646 435591.BDI_1627 0.0 1621.0 COG3537@1|root,COG3537@2|Bacteria,4NDYB@976|Bacteroidetes,2FMMF@200643|Bacteroidia,22XE8@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 LIIFOLDO_02647 435591.BDI_1626 5.25e-259 711.0 COG0738@1|root,COG0738@2|Bacteria,4NEB2@976|Bacteroidetes,2FMUT@200643|Bacteroidia,22VVA@171551|Porphyromonadaceae 976|Bacteroidetes G Major Facilitator - - - - - - - - - - - - MFS_1 LIIFOLDO_02648 435591.BDI_1625 0.0 1953.0 COG0383@1|root,COG0383@2|Bacteria,4NI6N@976|Bacteroidetes,2FQGF@200643|Bacteroidia 976|Bacteroidetes G COG COG0383 Alpha-mannosidase - - - - - - - - - - - - CBM-like,Glyco_hydro_38,Glyco_hydro_38C LIIFOLDO_02649 435591.BDI_2633 5.3e-284 836.0 2DUTV@1|root,33S7W@2|Bacteria,4P1VI@976|Bacteroidetes,2FWJJ@200643|Bacteroidia,22ZT0@171551|Porphyromonadaceae 435591.BDI_2633|- - - - - - - - - - - - - - - - LIIFOLDO_02650 435591.BDI_2627 5.6e-124 353.0 COG0454@1|root,COG0456@2|Bacteria,4NP7I@976|Bacteroidetes,2FSPI@200643|Bacteroidia,22Y1A@171551|Porphyromonadaceae 976|Bacteroidetes K Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_1,Acetyltransf_7 LIIFOLDO_02651 435591.BDI_2626 0.0 1696.0 COG3947@1|root,COG3947@2|Bacteria,4NFJU@976|Bacteroidetes,2FN4F@200643|Bacteroidia,22YK8@171551|Porphyromonadaceae 976|Bacteroidetes T COG NOG26059 non supervised orthologous group - - - - - - - - - - - - Laminin_G_3 LIIFOLDO_02652 435591.BDI_2625 0.0 1013.0 COG0673@1|root,COG0673@2|Bacteria,4NEN5@976|Bacteroidetes 976|Bacteroidetes S Pfam Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA LIIFOLDO_02653 435591.BDI_2624 6.98e-265 725.0 COG1082@1|root,COG1082@2|Bacteria,4NFQY@976|Bacteroidetes,2FWU9@200643|Bacteroidia,22ZRC@171551|Porphyromonadaceae 976|Bacteroidetes G Xylose isomerase domain protein TIM barrel - - - - - - - - - - - - AP_endonuc_2 LIIFOLDO_02654 435591.BDI_2623 4.22e-59 182.0 COG0776@1|root,COG0776@2|Bacteria 2|Bacteria L regulation of translation - - - ko:K03530 - - - - ko00000,ko03032,ko03036,ko03400 - - - Bac_DNA_binding LIIFOLDO_02655 435591.BDI_2622 1.32e-217 600.0 COG2207@1|root,COG2207@2|Bacteria,4NMRA@976|Bacteroidetes,2FMKM@200643|Bacteroidia 976|Bacteroidetes K transcriptional regulator (AraC family) thiD - 2.7.1.49,2.7.4.7 ko:K00941 ko00730,ko01100,map00730,map01100 M00127 R03471,R04509 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - AraC_binding,HTH_18,Phos_pyr_kin LIIFOLDO_02656 435591.BDI_2621 1.1e-150 424.0 COG0546@1|root,COG0546@2|Bacteria,4NIJ1@976|Bacteroidetes,2G32Q@200643|Bacteroidia,231ZS@171551|Porphyromonadaceae 976|Bacteroidetes S Haloacid dehalogenase-like hydrolase - - 3.1.3.18 ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 - R01334 RC00017 ko00000,ko00001,ko01000 - - - HAD_2 LIIFOLDO_02657 435591.BDI_2620 4.04e-52 164.0 2FFF9@1|root,347CS@2|Bacteria,4P64C@976|Bacteroidetes,2FTYY@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - LIIFOLDO_02658 435591.BDI_2619 5.08e-247 689.0 COG0539@1|root,COG1185@1|root,COG0539@2|Bacteria,COG1185@2|Bacteria,4NDW9@976|Bacteroidetes,2FNZK@200643|Bacteroidia,22WN9@171551|Porphyromonadaceae 976|Bacteroidetes J thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence rpsA - - ko:K02945 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - S1 LIIFOLDO_02659 1122931.AUAE01000014_gene2020 1.42e-31 110.0 2C3XY@1|root,2ZF4X@2|Bacteria,4P7U7@976|Bacteroidetes,2FZ9B@200643|Bacteroidia,2319Y@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_02660 435591.BDI_1524 1.78e-240 660.0 2C4R5@1|root,2Z7JK@2|Bacteria,4NHGV@976|Bacteroidetes,2FMRU@200643|Bacteroidia,22VUI@171551|Porphyromonadaceae 976|Bacteroidetes S GGGtGRT protein - - - - - - - - - - - - GGGtGRT LIIFOLDO_02661 435591.BDI_1525 2.98e-188 525.0 COG0778@1|root,COG1145@1|root,COG0778@2|Bacteria,COG1145@2|Bacteria,4NYA9@976|Bacteroidetes,2FR19@200643|Bacteroidia,22YZJ@171551|Porphyromonadaceae 976|Bacteroidetes C 4Fe-4S dicluster domain - - - - - - - - - - - - Fer4,Fer4_4,Fer4_6,Nitroreductase LIIFOLDO_02662 435591.BDI_1526 9.24e-37 123.0 2EG1V@1|root,339TV@2|Bacteria,4NX9J@976|Bacteroidetes,2FUKH@200643|Bacteroidia 976|Bacteroidetes S COG NOG17973 non supervised orthologous group - - - - - - - - - - - - DUF4250 LIIFOLDO_02664 435591.BDI_1527 4.73e-102 295.0 COG3015@1|root,COG3015@2|Bacteria,4NSEQ@976|Bacteroidetes,2FSUC@200643|Bacteroidia,22YXQ@171551|Porphyromonadaceae 976|Bacteroidetes MP NlpE N-terminal domain nlpE - - - - - - - - - - - META,NlpE LIIFOLDO_02665 435591.BDI_1528 0.0 1036.0 COG0488@1|root,COG0488@2|Bacteria,4NF6E@976|Bacteroidetes,2FNX4@200643|Bacteroidia,22WZS@171551|Porphyromonadaceae 976|Bacteroidetes S ATPases associated with a variety of cellular activities - - - - - - - - - - - - ABC_tran,ABC_tran_Xtn LIIFOLDO_02666 435591.BDI_1529 8.38e-170 474.0 COG1387@1|root,COG1387@2|Bacteria,4NJ0K@976|Bacteroidetes,2FPA9@200643|Bacteroidia,22WYB@171551|Porphyromonadaceae 976|Bacteroidetes E DNA polymerase alpha chain like domain - - - ko:K04477 - - - - ko00000 - - - PHP LIIFOLDO_02667 435591.BDI_1530 0.0 1135.0 COG0265@1|root,COG0457@1|root,COG0265@2|Bacteria,COG0457@2|Bacteria,4NJVP@976|Bacteroidetes,2FMV8@200643|Bacteroidia,22XQ1@171551|Porphyromonadaceae 976|Bacteroidetes O Tetratricopeptide repeat protein - - - - - - - - - - - - TPR_11,TPR_16,TPR_8,Trypsin_2 LIIFOLDO_02668 435591.BDI_1531 3.39e-167 468.0 COG2220@1|root,COG2220@2|Bacteria,4NFJ4@976|Bacteroidetes,2FNMD@200643|Bacteroidia,22YAB@171551|Porphyromonadaceae 976|Bacteroidetes S Beta-lactamase superfamily domain - - - - - - - - - - - - Lactamase_B_3 LIIFOLDO_02669 435591.BDI_1532 3.16e-278 762.0 COG0842@1|root,COG0842@2|Bacteria,4NJWT@976|Bacteroidetes,2FP7Q@200643|Bacteroidia,22WS8@171551|Porphyromonadaceae 976|Bacteroidetes V ABC-2 family transporter protein - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_3 LIIFOLDO_02670 435591.BDI_1533 3.68e-276 756.0 COG0842@1|root,COG0842@2|Bacteria,4NJWT@976|Bacteroidetes,2FP7Q@200643|Bacteroidia,22WB7@171551|Porphyromonadaceae 976|Bacteroidetes V ABC-2 family transporter protein - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_3 LIIFOLDO_02671 435591.BDI_1534 1.25e-217 602.0 COG0845@1|root,COG0845@2|Bacteria,4NI28@976|Bacteroidetes,2G38K@200643|Bacteroidia,22XD4@171551|Porphyromonadaceae 976|Bacteroidetes M Biotin-lipoyl like - - - ko:K01993 - - - - ko00000 - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 LIIFOLDO_02672 435591.BDI_1535 0.0 926.0 COG1538@1|root,COG1538@2|Bacteria,4NG42@976|Bacteroidetes,2FMZB@200643|Bacteroidia,22VXK@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - - - - - - - - - - OEP LIIFOLDO_02673 997884.HMPREF1068_02470 8.45e-222 619.0 COG2271@1|root,COG2271@2|Bacteria,4PKVW@976|Bacteroidetes,2FKZD@200643|Bacteroidia,4AMJ4@815|Bacteroidaceae 976|Bacteroidetes G Psort location CytoplasmicMembrane, score 10.00 fsr - - ko:K08223 - - - - ko00000,ko02000 2.A.1.35 - - MFS_1 LIIFOLDO_02674 435591.BDI_1538 2.14e-128 364.0 COG1716@1|root,COG1716@2|Bacteria,4NQCI@976|Bacteroidetes,2FM2E@200643|Bacteroidia,22Y5Q@171551|Porphyromonadaceae 976|Bacteroidetes T FHA domain protein - - - - - - - - - - - - FHA LIIFOLDO_02675 435591.BDI_1236 2.14e-233 641.0 COG0451@1|root,COG0451@2|Bacteria,4NE3U@976|Bacteroidetes,2FNS7@200643|Bacteroidia,22VZ9@171551|Porphyromonadaceae 976|Bacteroidetes GM NAD dependent epimerase dehydratase family ltd - - - - - - - - - - - Epimerase LIIFOLDO_02676 435591.BDI_1237 2.86e-287 784.0 COG0156@1|root,COG0156@2|Bacteria,4NFBU@976|Bacteroidetes,2FN0E@200643|Bacteroidia,22WXW@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA kbl - 2.3.1.29 ko:K00639 ko00260,map00260 - R00371 RC00004,RC00394 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 LIIFOLDO_02677 435591.BDI_1238 2.54e-207 572.0 COG1387@1|root,COG1387@2|Bacteria,4NIJU@976|Bacteroidetes,2FM5K@200643|Bacteroidia,22WVR@171551|Porphyromonadaceae 976|Bacteroidetes E Histidinol phosphatase - - 3.1.3.15 ko:K04486 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R03013 RC00017 ko00000,ko00001,ko00002,ko01000 - - - PHP LIIFOLDO_02678 435591.BDI_1239 2.37e-135 383.0 COG2096@1|root,COG2096@2|Bacteria,4NIQI@976|Bacteroidetes,2FQ6J@200643|Bacteroidia,22XQF@171551|Porphyromonadaceae 976|Bacteroidetes S ATP cob(I)alamin adenosyltransferase - - - - - - - - - - - - Cob_adeno_trans LIIFOLDO_02679 435591.BDI_1240 3.7e-245 677.0 COG0484@1|root,COG0484@2|Bacteria,4NF41@976|Bacteroidetes,2FPHH@200643|Bacteroidia,22WBJ@171551|Porphyromonadaceae 976|Bacteroidetes O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins dnaJ - - ko:K03686 - - - - ko00000,ko03029,ko03110 - - - DnaJ,DnaJ_C,DnaJ_CXXCXGXG LIIFOLDO_02680 435591.BDI_1241 8.25e-113 326.0 COG0576@1|root,COG0576@2|Bacteria,4NQ6M@976|Bacteroidetes,2FPIN@200643|Bacteroidia,22Y59@171551|Porphyromonadaceae 976|Bacteroidetes O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ grpE GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - ko:K03687 - - - - ko00000,ko03029,ko03110 - - - GrpE LIIFOLDO_02681 435591.BDI_1242 0.0 948.0 COG0793@1|root,COG0793@2|Bacteria,4NJ73@976|Bacteroidetes,2FR31@200643|Bacteroidia,22XBG@171551|Porphyromonadaceae 976|Bacteroidetes M PDZ DHR GLGF domain protein - - - - - - - - - - - - DUF4136,PDZ,PDZ_2 LIIFOLDO_02682 435591.BDI_1243 0.0 1521.0 COG1193@1|root,COG1193@2|Bacteria,4NFE6@976|Bacteroidetes,2FMKP@200643|Bacteroidia,22X9R@171551|Porphyromonadaceae 976|Bacteroidetes L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity mutS2 - - ko:K07456 ko03430,map03430 - - - ko00000,ko00001,ko03400 - - - MutS_V,Smr LIIFOLDO_02683 435591.BDI_1244 3.03e-256 702.0 COG0598@1|root,COG0598@2|Bacteria,4NG3C@976|Bacteroidetes,2FPIV@200643|Bacteroidia,22XS7@171551|Porphyromonadaceae 976|Bacteroidetes P Mediates influx of magnesium ions corA - - ko:K03284 - - - - ko00000,ko02000 1.A.35.1,1.A.35.3 - - CorA LIIFOLDO_02684 435591.BDI_1245 2.96e-138 391.0 COG1961@1|root,COG1961@2|Bacteria,4NJM8@976|Bacteroidetes,2FMQS@200643|Bacteroidia,22XYK@171551|Porphyromonadaceae 976|Bacteroidetes L Resolvase, N terminal domain - - - - - - - - - - - - HTH_7,Resolvase LIIFOLDO_02685 435591.BDI_1246 6.57e-262 718.0 COG3214@1|root,COG3214@2|Bacteria,4NGF2@976|Bacteroidetes,2FP5R@200643|Bacteroidia,22WBM@171551|Porphyromonadaceae 976|Bacteroidetes S Winged helix DNA-binding domain - - - - - - - - - - - - HTH_42 LIIFOLDO_02686 435591.BDI_1247 2.33e-65 198.0 COG3153@1|root,COG3153@2|Bacteria,4NU0E@976|Bacteroidetes,2FTTC@200643|Bacteroidia,22YQ4@171551|Porphyromonadaceae 976|Bacteroidetes S Putative zinc ribbon domain - - - - - - - - - - - - Zn_ribbon_2 LIIFOLDO_02687 435591.BDI_1248 5.94e-141 398.0 COG2207@1|root,COG3708@1|root,COG2207@2|Bacteria,COG3708@2|Bacteria,4NW8H@976|Bacteroidetes,2FN48@200643|Bacteroidia 976|Bacteroidetes K Integron-associated effector binding protein - - - - - - - - - - - - GyrI-like,HTH_18 LIIFOLDO_02688 435591.BDI_1249 4.2e-127 360.0 COG1917@1|root,COG1917@2|Bacteria,4NKT0@976|Bacteroidetes,2G05J@200643|Bacteroidia 976|Bacteroidetes S Cupin 2, conserved barrel domain protein - - 4.1.1.44 ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 - R03470 RC00938 ko00000,ko00001,ko01000 - - - CMD,Cupin_2 LIIFOLDO_02690 435591.BDI_0913 4.39e-289 788.0 COG0006@1|root,COG0006@2|Bacteria,4NJI0@976|Bacteroidetes,2FMKH@200643|Bacteroidia,22WGZ@171551|Porphyromonadaceae 976|Bacteroidetes E peptidase M24 pepQ - 3.4.11.9,3.4.13.9 ko:K01262,ko:K01271 - - - - ko00000,ko01000,ko01002 - - - Creatinase_N,Peptidase_M24 LIIFOLDO_02691 435591.BDI_0914 1.36e-105 304.0 COG2731@1|root,COG2731@2|Bacteria,4NQU1@976|Bacteroidetes,2G2E1@200643|Bacteroidia,22Y5R@171551|Porphyromonadaceae 976|Bacteroidetes G YhcH YjgK YiaL family protein - - - - - - - - - - - - DUF386 LIIFOLDO_02692 435591.BDI_0915 0.0 1392.0 COG2217@1|root,COG2217@2|Bacteria,4NERS@976|Bacteroidetes,2FNJA@200643|Bacteroidia,22WCT@171551|Porphyromonadaceae 976|Bacteroidetes P Copper-exporting ATPase copA - 3.6.3.4,3.6.3.54 ko:K01533,ko:K17686 ko01524,ko04016,map01524,map04016 - R00086 RC00002 ko00000,ko00001,ko01000 3.A.3.5 - - E1-E2_ATPase,HMA,Hydrolase LIIFOLDO_02693 435591.BDI_0916 1.15e-39 131.0 COG2608@1|root,COG2608@2|Bacteria,4P9HM@976|Bacteroidetes,2FVA2@200643|Bacteroidia,22Z0Y@171551|Porphyromonadaceae 976|Bacteroidetes P mercury ion transmembrane transporter activity - - - - - - - - - - - - HMA LIIFOLDO_02694 435591.BDI_0917 2.95e-160 448.0 COG1272@1|root,COG1272@2|Bacteria,4NM95@976|Bacteroidetes,2FPGK@200643|Bacteroidia,22Y04@171551|Porphyromonadaceae 976|Bacteroidetes S Haemolysin-III related hly-III - - ko:K11068 - - - - ko00000,ko02042 - - - HlyIII LIIFOLDO_02695 435591.BDI_0918 2.27e-315 859.0 COG0312@1|root,COG0312@2|Bacteria,4NE1F@976|Bacteroidetes,2FPXY@200643|Bacteroidia,22X4I@171551|Porphyromonadaceae 976|Bacteroidetes S Putative modulator of DNA gyrase tldD3 - - ko:K03592 - - - - ko00000,ko01002 - - - PmbA_TldD LIIFOLDO_02696 435591.BDI_0919 0.0 986.0 COG0312@1|root,COG0312@2|Bacteria,4NG2Y@976|Bacteroidetes,2FN09@200643|Bacteroidia,22X19@171551|Porphyromonadaceae 976|Bacteroidetes S Putative modulator of DNA gyrase tldD1 - - ko:K03568 - - - - ko00000,ko01002 - - - PmbA_TldD LIIFOLDO_02697 435591.BDI_0920 0.0 884.0 COG0641@1|root,COG0641@2|Bacteria,4NG1N@976|Bacteroidetes,2FMBY@200643|Bacteroidia,22WJ8@171551|Porphyromonadaceae 976|Bacteroidetes C oxidizes both cysteine and serine residues to C-alpha-formylglycine in sulfatase enzyme protein substrates atsB - - ko:K06871 - - - - ko00000 - - - Fer4_12,Fer4_14,Radical_SAM,SPASM LIIFOLDO_02698 435591.BDI_0921 0.0 1103.0 COG1807@1|root,COG1807@2|Bacteria,4NKI5@976|Bacteroidetes,2FMT9@200643|Bacteroidia,22WVD@171551|Porphyromonadaceae 976|Bacteroidetes M Dolichyl-phosphate-mannose-protein mannosyltransferase arnT - - - - - - - - - - - PMT_2 LIIFOLDO_02699 435591.BDI_0922 0.0 1003.0 COG1123@1|root,COG1123@2|Bacteria,4NIKC@976|Bacteroidetes,2FQ7J@200643|Bacteroidia,22X6G@171551|Porphyromonadaceae 976|Bacteroidetes P Protein of unknown function (DUF4435) - - - - - - - - - - - - AAA_21,DUF4435 LIIFOLDO_02704 435591.BDI_0679 0.0 1550.0 COG1752@1|root,COG1752@2|Bacteria,4NDXY@976|Bacteroidetes,2FNEV@200643|Bacteroidia,22WBN@171551|Porphyromonadaceae 976|Bacteroidetes M esterase of the alpha-beta hydrolase superfamily - - - ko:K07001 - - - - ko00000 - - - Patatin LIIFOLDO_02705 435591.BDI_0680 6.94e-70 211.0 COG0526@1|root,COG0526@2|Bacteria,4P4ME@976|Bacteroidetes,2FTEI@200643|Bacteroidia 976|Bacteroidetes O Belongs to the thioredoxin family - - - ko:K03671 ko04621,ko05418,map04621,map05418 - - - ko00000,ko00001,ko03110 - - - Thioredoxin LIIFOLDO_02706 435591.BDI_0681 0.0 1339.0 COG0326@1|root,COG0326@2|Bacteria,4NDXZ@976|Bacteroidetes,2FMED@200643|Bacteroidia,22W1D@171551|Porphyromonadaceae 976|Bacteroidetes O Molecular chaperone HSP90 htpG - - ko:K04079 ko04141,ko04151,ko04217,ko04612,ko04621,ko04626,ko04657,ko04659,ko04914,ko04915,ko05200,ko05215,ko05418,map04141,map04151,map04217,map04612,map04621,map04626,map04657,map04659,map04914,map04915,map05200,map05215,map05418 - - - ko00000,ko00001,ko01009,ko03029,ko03051,ko03110,ko04131,ko04147 - - - HATPase_c_3,HSP90 LIIFOLDO_02707 435591.BDI_0682 0.0 998.0 COG0477@1|root,COG0477@2|Bacteria,4NGQB@976|Bacteroidetes,2G05D@200643|Bacteroidia,231CF@171551|Porphyromonadaceae 976|Bacteroidetes EGP Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - MFS_1 LIIFOLDO_02708 435591.BDI_0683 1.08e-248 683.0 COG1566@1|root,COG1566@2|Bacteria,4NEQJ@976|Bacteroidetes,2FMKF@200643|Bacteroidia,22X9S@171551|Porphyromonadaceae 976|Bacteroidetes V Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - ko:K03543 - M00701 - - ko00000,ko00002,ko02000 8.A.1.1 - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 LIIFOLDO_02709 435591.BDI_0684 3.18e-299 818.0 COG1538@1|root,COG1538@2|Bacteria,4NHN2@976|Bacteroidetes,2FMG9@200643|Bacteroidia,22XYH@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - - - - - - - - - - OEP LIIFOLDO_02710 435591.BDI_0685 6.52e-98 285.0 COG1846@1|root,COG1846@2|Bacteria,4NY9Z@976|Bacteroidetes,2G3AV@200643|Bacteroidia,23214@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix multiple antibiotic resistance protein - - - - - - - - - - - - MarR LIIFOLDO_02711 435591.BDI_0686 1.47e-120 343.0 COG0716@1|root,COG0716@2|Bacteria,4NP3J@976|Bacteroidetes,2FT0W@200643|Bacteroidia 976|Bacteroidetes C Low-potential electron donor to a number of redox enzymes isiB - - ko:K03839 - - - - ko00000 - - - Flavodoxin_1 LIIFOLDO_02712 435591.BDI_0687 0.0 1362.0 COG0022@1|root,COG1071@1|root,COG0022@2|Bacteria,COG1071@2|Bacteria,4NE71@976|Bacteroidetes,2FQB7@200643|Bacteroidia 976|Bacteroidetes C dehydrogenase E1 component bfmBAB - 1.2.4.4 ko:K11381 ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130 M00036 R07599,R07600,R07601,R07602,R07603,R07604,R10996,R10997 RC00027,RC00627,RC02743,RC02883,RC02949,RC02953 br01601,ko00000,ko00001,ko00002,ko01000 - - - E1_dh,Transket_pyr,Transketolase_C LIIFOLDO_02713 435591.BDI_0688 5.84e-309 843.0 COG0508@1|root,COG0508@2|Bacteria,4NED0@976|Bacteroidetes,2FNQF@200643|Bacteroidia,22XWE@171551|Porphyromonadaceae 976|Bacteroidetes C 2-oxoacid dehydrogenases acyltransferase (catalytic domain) bfmBB - 2.3.1.61 ko:K00658 ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00032 R02570,R02571,R08549 RC00004,RC02727,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - 2-oxoacid_dh,Biotin_lipoyl,E3_binding LIIFOLDO_02716 435591.BDI_2976 0.0 1408.0 COG1397@1|root,COG1397@2|Bacteria,4NY3F@976|Bacteroidetes,2FZQI@200643|Bacteroidia,2313J@171551|Porphyromonadaceae 976|Bacteroidetes O ADP-ribosylglycohydrolase - - - - - - - - - - - - - LIIFOLDO_02718 435591.BDI_3557 3.62e-274 747.0 COG2220@1|root,COG2220@2|Bacteria,4NENZ@976|Bacteroidetes,2FQ7D@200643|Bacteroidia,22VZN@171551|Porphyromonadaceae 976|Bacteroidetes S Beta-lactamase superfamily domain romA - - - - - - - - - - - Lactamase_B_2 LIIFOLDO_02719 435591.BDI_3558 7.88e-104 298.0 2C6X9@1|root,34AQQ@2|Bacteria,4P6US@976|Bacteroidetes,2G1S8@200643|Bacteroidia,2316B@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_02720 435591.BDI_3559 1.15e-89 263.0 COG2172@1|root,COG2172@2|Bacteria 2|Bacteria T sigma factor antagonist activity - - 2.7.11.1 ko:K04757 - - - - ko00000,ko01000,ko01001,ko03021 - - - HATPase_c_2 LIIFOLDO_02721 435591.BDI_3560 2.03e-67 204.0 COG1366@1|root,COG1366@2|Bacteria,4NZCC@976|Bacteroidetes,2FVWU@200643|Bacteroidia 976|Bacteroidetes T STAS domain - - - ko:K04749 - - - - ko00000,ko03021 - - - STAS LIIFOLDO_02722 1235803.C825_02846 3.85e-65 214.0 291SX@1|root,2ZPCV@2|Bacteria,4P7IG@976|Bacteroidetes,2FZBN@200643|Bacteroidia 976|Bacteroidetes S Fimbrillin-A associated anchor proteins Mfa1 and Mfa2 - - - - - - - - - - - - Mfa2 LIIFOLDO_02723 435591.BDI_3562 7.22e-284 775.0 COG0673@1|root,COG0673@2|Bacteria,4NFMS@976|Bacteroidetes,2FQ3R@200643|Bacteroidia 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA,GFO_IDH_MocA_C LIIFOLDO_02724 435591.BDI_3563 1.09e-253 694.0 COG1082@1|root,COG1082@2|Bacteria,4NGBE@976|Bacteroidetes,2FNN2@200643|Bacteroidia,22ZAK@171551|Porphyromonadaceae 976|Bacteroidetes G AP endonuclease family 2 C terminus - - - - - - - - - - - - AP_endonuc_2,AP_endonuc_2_N LIIFOLDO_02725 435591.BDI_3564 1.87e-249 683.0 COG1409@1|root,COG1409@2|Bacteria,4NH6X@976|Bacteroidetes,2FNXS@200643|Bacteroidia,22WHG@171551|Porphyromonadaceae 976|Bacteroidetes S Calcineurin-like phosphoesterase - - - - - - - - - - - - Metallophos LIIFOLDO_02726 435591.BDI_3565 5.12e-211 583.0 COG0673@1|root,COG0673@2|Bacteria,4NGP9@976|Bacteroidetes,2FMTZ@200643|Bacteroidia,22WG9@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate ddh - 1.4.1.16 ko:K03340 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 M00526 R02755 RC00006 ko00000,ko00001,ko00002,ko01000 - - - CoA_binding,DAPDH_C,GFO_IDH_MocA,Semialdhyde_dh LIIFOLDO_02727 435591.BDI_3566 1.32e-216 595.0 COG0682@1|root,COG0682@2|Bacteria,4NFP7@976|Bacteroidetes,2FMXU@200643|Bacteroidia,22WIT@171551|Porphyromonadaceae 976|Bacteroidetes M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins lgt - - - - - - - - - - - LGT LIIFOLDO_02728 435591.BDI_0585 1.32e-95 287.0 COG1979@1|root,COG1979@2|Bacteria,4NF1D@976|Bacteroidetes,2FPAW@200643|Bacteroidia,22W7C@171551|Porphyromonadaceae 976|Bacteroidetes C alcohol dehydrogenase yqhD - - ko:K08325 ko00640,map00640 - R02528 RC00739 ko00000,ko00001,ko01000 - - - Fe-ADH LIIFOLDO_02729 435591.BDI_0584 6.51e-134 379.0 COG1556@1|root,COG1556@2|Bacteria,4NQSF@976|Bacteroidetes,2FQAQ@200643|Bacteroidia,22XWN@171551|Porphyromonadaceae 976|Bacteroidetes S LUD domain lutC - - ko:K00782 - - - - ko00000 - - - LUD_dom LIIFOLDO_02730 435591.BDI_0583 0.0 925.0 COG1139@1|root,COG1139@2|Bacteria,4NEBT@976|Bacteroidetes,2FP2X@200643|Bacteroidia,22W4D@171551|Porphyromonadaceae 976|Bacteroidetes C 4Fe-4S ferredoxin - - - ko:K18929 - - - - ko00000 - - - DUF3390,Fer4_8,LUD_dom LIIFOLDO_02731 435591.BDI_0582 3.43e-183 508.0 COG0247@1|root,COG0247@2|Bacteria,4NIMP@976|Bacteroidetes,2FN40@200643|Bacteroidia,22WPM@171551|Porphyromonadaceae 976|Bacteroidetes C Fe-S oxidoreductase - - - ko:K18928 - - - - ko00000 - - - CCG LIIFOLDO_02732 435591.BDI_0581 1.86e-129 368.0 COG0664@1|root,COG0664@2|Bacteria,4NSMK@976|Bacteroidetes,2FSMY@200643|Bacteroidia,231UJ@171551|Porphyromonadaceae 976|Bacteroidetes T COGs COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase - - - - - - - - - - - - cNMP_binding LIIFOLDO_02733 435591.BDI_0580 0.0 2113.0 COG0458@1|root,COG0458@2|Bacteria,4NEQ0@976|Bacteroidetes,2FMKD@200643|Bacteroidia,22W4Y@171551|Porphyromonadaceae 976|Bacteroidetes EF Carbamoyl-phosphate synthase (glutamine-hydrolyzing) carB - 6.3.5.5 ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 - - - CPSase_L_D2,CPSase_L_D3,MGS LIIFOLDO_02734 435591.BDI_0579 3.53e-300 816.0 COG0505@1|root,COG0505@2|Bacteria,4NEQI@976|Bacteroidetes,2FMSR@200643|Bacteroidia,22WBW@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the CarA family carA - 6.3.5.5 ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 - - - CPSase_sm_chain,GATase LIIFOLDO_02735 435591.BDI_0578 0.0 1267.0 COG0034@1|root,COG0034@2|Bacteria,4NFSM@976|Bacteroidetes,2FM3Y@200643|Bacteroidia,22W9N@171551|Porphyromonadaceae 976|Bacteroidetes F amidophosphoribosyltransferase purF - 2.4.2.14 ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048 R01072 RC00010,RC02724,RC02752 ko00000,ko00001,ko00002,ko01000,ko01002 - - - GATase_7 LIIFOLDO_02736 443254.Marpi_0436 1.09e-111 339.0 COG1373@1|root,COG1373@2|Bacteria,2GCQH@200918|Thermotogae 200918|Thermotogae S AAA domain - - - ko:K07133 - - - - ko00000 - - - AAA_14 LIIFOLDO_02737 537011.PREVCOP_05820 2.96e-172 489.0 COG0836@1|root,COG0836@2|Bacteria,4NE1Y@976|Bacteroidetes,2FNHF@200643|Bacteroidia 976|Bacteroidetes M Mannose-1-phosphate guanylyltransferase manC - 2.7.7.13 ko:K00971 ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110 M00114,M00361,M00362 R00885 RC00002 ko00000,ko00001,ko00002,ko01000 - - - MannoseP_isomer,NTP_transferase LIIFOLDO_02738 435591.BDI_1344 2.85e-74 233.0 COG0463@1|root,COG0463@2|Bacteria,4NK1T@976|Bacteroidetes,2FSBC@200643|Bacteroidia 976|Bacteroidetes M Glycosyltransferase, group 2 family protein - - - - - - - - - - - - Glycos_transf_2 LIIFOLDO_02739 203275.BFO_1025 1.31e-269 753.0 COG1053@1|root,COG1053@2|Bacteria,4NG56@976|Bacteroidetes,2FNK8@200643|Bacteroidia,22YF8@171551|Porphyromonadaceae 976|Bacteroidetes C FAD dependent oxidoreductase - - - - - - - - - - - - FAD_oxidored LIIFOLDO_02740 1123008.KB905696_gene2760 8.46e-258 725.0 COG1435@1|root,COG1435@2|Bacteria,4NFWU@976|Bacteroidetes,2FN5G@200643|Bacteroidia,22Y1T@171551|Porphyromonadaceae 976|Bacteroidetes F Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_02741 1123008.KB905696_gene2759 0.0 1164.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FW4E@200643|Bacteroidia,22XIY@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec LIIFOLDO_02742 435591.BDI_3962 1e-222 615.0 COG3712@1|root,COG3712@2|Bacteria,4P2MV@976|Bacteroidetes,2FS9V@200643|Bacteroidia 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR LIIFOLDO_02743 435591.BDI_3961 7.53e-113 325.0 COG1595@1|root,COG1595@2|Bacteria,4NS1I@976|Bacteroidetes,2FNDV@200643|Bacteroidia,2310B@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 LIIFOLDO_02744 435591.BDI_3959 1.97e-230 634.0 COG1270@1|root,COG1270@2|Bacteria,4NH59@976|Bacteroidetes,2FPBS@200643|Bacteroidia,22WQQ@171551|Porphyromonadaceae 976|Bacteroidetes H Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group cobD - 6.3.1.10 ko:K02227 ko00860,ko01100,map00860,map01100 M00122 R06529,R07302 RC00090,RC00096 ko00000,ko00001,ko00002,ko01000 - - - CobD_Cbib LIIFOLDO_02745 435591.BDI_3958 4.73e-121 347.0 COG1187@1|root,COG1187@2|Bacteria,4P7C7@976|Bacteroidetes,2FZBQ@200643|Bacteroidia,22Z0M@171551|Porphyromonadaceae 976|Bacteroidetes J S4 domain protein - - 5.4.99.21 ko:K06182 - - - - ko00000,ko01000,ko03009 - - - S4 LIIFOLDO_02746 435591.BDI_3957 1.28e-117 337.0 COG2087@1|root,COG2087@2|Bacteria,4NMKE@976|Bacteroidetes,2FSA1@200643|Bacteroidia,22XKW@171551|Porphyromonadaceae 976|Bacteroidetes H cobinamide kinase cobU - 2.7.1.156,2.7.7.62 ko:K02231 ko00860,ko01100,map00860,map01100 M00122 R05221,R05222,R06558 RC00002,RC00428 ko00000,ko00001,ko00002,ko01000 - - - CobU LIIFOLDO_02747 435591.BDI_3956 1.14e-254 697.0 COG2038@1|root,COG2038@2|Bacteria,4NG1E@976|Bacteroidetes,2FMWI@200643|Bacteroidia,22WI9@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) cobT - 2.4.2.21 ko:K00768 ko00860,ko01100,map00860,map01100 M00122 R04148 RC00033,RC00063 ko00000,ko00001,ko00002,ko01000 - - - DBI_PRT LIIFOLDO_02748 435591.BDI_3955 2.21e-176 491.0 COG0368@1|root,COG0368@2|Bacteria,4NHNT@976|Bacteroidetes,2FNXF@200643|Bacteroidia,22XVT@171551|Porphyromonadaceae 976|Bacteroidetes H Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate cobS - 2.7.8.26 ko:K02233 ko00860,ko01100,map00860,map01100 M00122 R05223,R11174 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 - - - CobS LIIFOLDO_02749 435591.BDI_3954 1.63e-131 372.0 COG0406@1|root,COG0406@2|Bacteria,4NQD3@976|Bacteroidetes,2FS51@200643|Bacteroidia,22XZ9@171551|Porphyromonadaceae 976|Bacteroidetes G phosphoglycerate mutase cobC - 3.1.3.73 ko:K02226 ko00860,ko01100,map00860,map01100 M00122 R04594,R11173 RC00017 ko00000,ko00001,ko00002,ko01000 - - - His_Phos_1 LIIFOLDO_02750 435591.BDI_1723 1.43e-224 619.0 COG1893@1|root,COG1893@2|Bacteria,4NMFF@976|Bacteroidetes,2FNZU@200643|Bacteroidia,22XU7@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid panE - 1.1.1.169 ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 M00119 R02472 RC00726 ko00000,ko00001,ko00002,ko01000 - - - ApbA,ApbA_C LIIFOLDO_02751 435591.BDI_1724 2.57e-139 393.0 COG2818@1|root,COG2818@2|Bacteria,4NGRC@976|Bacteroidetes,2FN7E@200643|Bacteroidia,22WRE@171551|Porphyromonadaceae 976|Bacteroidetes L DNA-3-methyladenine glycosylase tag - 3.2.2.20 ko:K01246 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - Adenine_glyco LIIFOLDO_02752 435591.BDI_1725 2.01e-242 665.0 COG1482@1|root,COG1482@2|Bacteria,4NF9A@976|Bacteroidetes,2FN4I@200643|Bacteroidia,22W94@171551|Porphyromonadaceae 976|Bacteroidetes G mannose-6-phosphate isomerase manA - 5.3.1.8 ko:K01809 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 M00114 R01819 RC00376 ko00000,ko00001,ko00002,ko01000 - - - PMI_typeI LIIFOLDO_02753 435591.BDI_1726 0.0 1405.0 COG0296@1|root,COG0296@2|Bacteria,4NECZ@976|Bacteroidetes,2FMTG@200643|Bacteroidia,22W4H@171551|Porphyromonadaceae 976|Bacteroidetes G 1,4-alpha-glucan branching enzyme glgB - 2.4.1.18 ko:K00700 ko00500,ko01100,ko01110,map00500,map01100,map01110 M00565 R02110 - ko00000,ko00001,ko00002,ko01000,ko04147 - CBM48,GH13 - Alpha-amylase,Alpha-amylase_C,CBM_48 LIIFOLDO_02754 435591.BDI_1727 0.0 1449.0 COG0475@1|root,COG0475@2|Bacteria,4NFPE@976|Bacteroidetes,2FN00@200643|Bacteroidia,22XDI@171551|Porphyromonadaceae 976|Bacteroidetes P Transporter, CPA2 family nhaS3 - - - - - - - - - - - Na_H_Exchanger LIIFOLDO_02755 435591.BDI_1728 1.59e-135 384.0 COG0778@1|root,COG0778@2|Bacteria,4NP90@976|Bacteroidetes,2FP45@200643|Bacteroidia,22XN6@171551|Porphyromonadaceae 976|Bacteroidetes C Nitroreductase family - - - - - - - - - - - - FMN_bind,Nitroreductase LIIFOLDO_02756 435591.BDI_1729 0.0 1679.0 COG0419@1|root,COG0419@2|Bacteria,4NH9H@976|Bacteroidetes,2FPAQ@200643|Bacteroidia,22WKY@171551|Porphyromonadaceae 976|Bacteroidetes L Putative exonuclease SbcCD, C subunit sbcC - - ko:K03546 - - - - ko00000,ko03400 - - - AAA_23,SbcCD_C LIIFOLDO_02757 435591.BDI_1730 3.56e-298 813.0 COG0420@1|root,COG0420@2|Bacteria,4NEET@976|Bacteroidetes,2FN3W@200643|Bacteroidia,22XGK@171551|Porphyromonadaceae 976|Bacteroidetes L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity sbcD - - ko:K03547 - - - - ko00000,ko03400 - - - Metallophos,SbcD_C LIIFOLDO_02760 1347393.HG726020_gene1829 1.31e-137 410.0 2C470@1|root,2Z7P9@2|Bacteria,4NJ8K@976|Bacteroidetes,2FM10@200643|Bacteroidia,4AT1Q@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - DUF5309 LIIFOLDO_02764 1347393.HG726020_gene1832 1.24e-262 746.0 COG4373@1|root,COG4373@2|Bacteria,4NI4T@976|Bacteroidetes,2FNH0@200643|Bacteroidia,4AT86@815|Bacteroidaceae 976|Bacteroidetes S Mu-like prophage FluMu protein gp28 - - - - - - - - - - - - - LIIFOLDO_02765 1227276.HMPREF9148_00164 1.44e-211 613.0 28IFC@1|root,2Z8H3@2|Bacteria,4NJUZ@976|Bacteroidetes,2FPHP@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_02768 1236504.HMPREF2132_11510 1.25e-113 333.0 COG3617@1|root,COG3645@1|root,COG3617@2|Bacteria,COG3645@2|Bacteria,4P03W@976|Bacteroidetes,2G2MC@200643|Bacteroidia 976|Bacteroidetes K BRO family, N-terminal domain - - - - - - - - - - - - ANT,Bro-N LIIFOLDO_02772 435591.BDI_3652 0.0 1264.0 COG1215@1|root,COG1215@2|Bacteria,4NFI8@976|Bacteroidetes,2FQAZ@200643|Bacteroidia,22W2Z@171551|Porphyromonadaceae 976|Bacteroidetes M Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - GT87 LIIFOLDO_02773 435591.BDI_3651 5.07e-188 521.0 COG0220@1|root,COG0220@2|Bacteria,4NG4V@976|Bacteroidetes,2FN8Z@200643|Bacteroidia,22WBB@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA trmB GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 ko:K03439 - - - - ko00000,ko01000,ko03016 - - - Methyltransf_4 LIIFOLDO_02774 435591.BDI_3650 8.47e-264 723.0 COG0489@1|root,COG0489@2|Bacteria,4NF5I@976|Bacteroidetes,2FKYK@200643|Bacteroidia,22WYQ@171551|Porphyromonadaceae 976|Bacteroidetes D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP mrp - - ko:K03593 - - - - ko00000,ko03029,ko03036 - - - FeS_assembly_P,ParA LIIFOLDO_02775 435591.BDI_3649 3.89e-288 785.0 COG3274@1|root,COG3274@2|Bacteria,4NP3U@976|Bacteroidetes,2FN6D@200643|Bacteroidia,22XW5@171551|Porphyromonadaceae 976|Bacteroidetes S Acyltransferase family - - - - - - - - - - - - Acyl_transf_3 LIIFOLDO_02776 435591.BDI_3648 0.0 972.0 COG2986@1|root,COG2986@2|Bacteria,4NE0D@976|Bacteroidetes,2FMCF@200643|Bacteroidia,22X1Y@171551|Porphyromonadaceae 976|Bacteroidetes E Histidine ammonia-lyase hutH - 4.3.1.3 ko:K01745 ko00340,ko01100,map00340,map01100 M00045 R01168 RC00361 ko00000,ko00001,ko00002,ko01000 - - - Lyase_aromatic LIIFOLDO_02777 435591.BDI_3647 4.3e-135 384.0 COG3404@1|root,COG3404@2|Bacteria,4NN2J@976|Bacteroidetes,2FPSN@200643|Bacteroidia,22XZX@171551|Porphyromonadaceae 976|Bacteroidetes E Methenyltetrahydrofolate cyclohydrolase fchA - - - - - - - - - - - FTCD_C,Peptidase_M78 LIIFOLDO_02778 435591.BDI_3646 1.92e-302 824.0 COG1228@1|root,COG1228@2|Bacteria,4NE6C@976|Bacteroidetes,2FNW2@200643|Bacteroidia,22W99@171551|Porphyromonadaceae 976|Bacteroidetes Q Imidazolone-5-propionate hydrolase hutI - 3.5.2.7 ko:K01468 ko00340,ko01100,map00340,map01100 M00045 R02288 RC00683 ko00000,ko00001,ko00002,ko01000 - - - Amidohydro_1,Amidohydro_3 LIIFOLDO_02779 435591.BDI_3645 8.2e-214 590.0 COG3643@1|root,COG3643@2|Bacteria,4NFE3@976|Bacteroidetes,2FMWT@200643|Bacteroidia,22WZC@171551|Porphyromonadaceae 976|Bacteroidetes E Glutamate formiminotransferase ftcD - 2.1.2.5,4.3.1.4 ko:K00603,ko:K13990 ko00340,ko00670,ko01100,map00340,map00670,map01100 - R02287,R02302,R03189 RC00165,RC00221,RC00223,RC00688,RC00870 ko00000,ko00001,ko01000,ko03036,ko04147 - - - FTCD,FTCD_C,FTCD_N LIIFOLDO_02780 435591.BDI_3644 0.0 1357.0 COG2987@1|root,COG2987@2|Bacteria,4NF2P@976|Bacteroidetes,2FNQK@200643|Bacteroidia,22X3D@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate hutU - 4.2.1.49 ko:K01712 ko00340,ko01100,map00340,map01100 M00045 R02914 RC00804 ko00000,ko00001,ko00002,ko01000 - - - Urocanase,Urocanase_C,Urocanase_N LIIFOLDO_02781 1122931.AUAE01000005_gene3556 9.92e-25 95.1 COG2361@1|root,COG2361@2|Bacteria,4NSC7@976|Bacteroidetes,2G2D1@200643|Bacteroidia,231W3@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function DUF86 - - - - - - - - - - - - DUF86 LIIFOLDO_02782 435591.BDI_3639 1.81e-61 189.0 COG1669@1|root,COG1669@2|Bacteria,4NV8X@976|Bacteroidetes 976|Bacteroidetes S PFAM Nucleotidyltransferase domain - - - ko:K07075 - - - - ko00000 - - - NTP_transf_2 LIIFOLDO_02783 435591.BDI_3641 1.46e-43 151.0 COG0399@1|root,COG0399@2|Bacteria,4NFAI@976|Bacteroidetes,2FN8X@200643|Bacteroidia,22X99@171551|Porphyromonadaceae 976|Bacteroidetes E DegT/DnrJ/EryC1/StrS aminotransferase family pglE - - - - - - - - - - - DegT_DnrJ_EryC1 LIIFOLDO_02784 435591.BDI_3013 0.0 1636.0 COG1629@1|root,COG4771@2|Bacteria,4NEIG@976|Bacteroidetes,2FM1K@200643|Bacteroidia 976|Bacteroidetes P TonB-dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3,Plug LIIFOLDO_02786 435591.BDI_3012 8.38e-258 706.0 COG1835@1|root,COG1835@2|Bacteria,4NPW5@976|Bacteroidetes,2FQBT@200643|Bacteroidia,22YXR@171551|Porphyromonadaceae 976|Bacteroidetes I Acyltransferase family - - - - - - - - - - - - Acyl_transf_3 LIIFOLDO_02787 435591.BDI_3011 0.0 1535.0 COG3292@1|root,COG3292@2|Bacteria,4NDWE@976|Bacteroidetes,2FQ6Y@200643|Bacteroidia,22WCG@171551|Porphyromonadaceae 976|Bacteroidetes T Two component regulator propeller - - - - - - - - - - - - Reg_prop LIIFOLDO_02788 435591.BDI_3010 6.26e-137 387.0 COG0127@1|root,COG0127@2|Bacteria,4NM42@976|Bacteroidetes,2FP46@200643|Bacteroidia,22XN1@171551|Porphyromonadaceae 976|Bacteroidetes F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions rdgB GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 ko:K02428 ko00230,map00230 - R00426,R00720,R01855,R02100,R02720,R03531 RC00002 ko00000,ko00001,ko01000 - - - Ham1p_like LIIFOLDO_02789 435591.BDI_3009 4.14e-198 550.0 COG1284@1|root,COG1284@2|Bacteria,4NG9F@976|Bacteroidetes,2FP2N@200643|Bacteroidia,22WWJ@171551|Porphyromonadaceae 976|Bacteroidetes S membrane - - - - - - - - - - - - DUF2179,YitT_membrane LIIFOLDO_02790 435591.BDI_3008 0.0 1942.0 COG0495@1|root,COG0495@2|Bacteria,4NE5K@976|Bacteroidetes,2FM7V@200643|Bacteroidia,22X0R@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the class-I aminoacyl-tRNA synthetase family leuS GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 ko:K01869 ko00970,map00970 M00359,M00360 R03657 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 - - - Anticodon_1,DUF559,tRNA-synt_1,tRNA-synt_1_2 LIIFOLDO_02791 435591.BDI_3007 2.1e-122 350.0 COG3646@1|root,COG3646@2|Bacteria,4PM3Z@976|Bacteroidetes,2G0KJ@200643|Bacteroidia,2324X@171551|Porphyromonadaceae 976|Bacteroidetes S ORF6N domain - - - - - - - - - - - - ORF6N LIIFOLDO_02792 435591.BDI_3006 4.06e-121 347.0 COG3646@1|root,COG3646@2|Bacteria,4PM3Z@976|Bacteroidetes,2G0KJ@200643|Bacteroidia,2324X@171551|Porphyromonadaceae 976|Bacteroidetes S ORF6N domain - - - - - - - - - - - - ORF6N LIIFOLDO_02793 435591.BDI_3006 3.15e-109 317.0 COG3646@1|root,COG3646@2|Bacteria,4PM3Z@976|Bacteroidetes,2G0KJ@200643|Bacteroidia,2324X@171551|Porphyromonadaceae 976|Bacteroidetes S ORF6N domain - - - - - - - - - - - - ORF6N LIIFOLDO_02794 435591.BDI_3006 2.16e-109 316.0 COG3646@1|root,COG3646@2|Bacteria,4PM3Z@976|Bacteroidetes,2G0KJ@200643|Bacteroidia,2324X@171551|Porphyromonadaceae 976|Bacteroidetes S ORF6N domain - - - - - - - - - - - - ORF6N LIIFOLDO_02795 435591.BDI_1698 3.04e-117 356.0 2DM3I@1|root,31JQ3@2|Bacteria,4NRM4@976|Bacteroidetes,2FM1R@200643|Bacteroidia,231KE@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location OuterMembrane, score - - - - - - - - - - - - - LIIFOLDO_02796 435591.BDI_1697 0.0 1078.0 COG2067@1|root,COG2067@2|Bacteria,4NFS7@976|Bacteroidetes,2FM7S@200643|Bacteroidia,22WCW@171551|Porphyromonadaceae 976|Bacteroidetes I Outer membrane protein transport protein, Ompp1 FadL TodX - - - - - - - - - - - - Toluene_X LIIFOLDO_02797 435591.BDI_1696 2.09e-137 389.0 COG1595@1|root,COG1595@2|Bacteria,4NF93@976|Bacteroidetes,2FNJV@200643|Bacteroidia,22W2N@171551|Porphyromonadaceae 976|Bacteroidetes K Belongs to the sigma-70 factor family. ECF subfamily rpoE - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4,Sigma70_r4_2 LIIFOLDO_02799 435591.BDI_1695 1.45e-151 426.0 COG0036@1|root,COG0036@2|Bacteria,4NDXB@976|Bacteroidetes,2FM7Z@200643|Bacteroidia,22WA0@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the ribulose-phosphate 3-epimerase family rpe - 5.1.3.1 ko:K01783 ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007 R01529 RC00540 ko00000,ko00001,ko00002,ko01000 - - - Ribul_P_3_epim LIIFOLDO_02800 435591.BDI_1694 1.24e-295 808.0 COG0658@1|root,COG0658@2|Bacteria,4NEJH@976|Bacteroidetes,2FPT6@200643|Bacteroidia,22VXE@171551|Porphyromonadaceae 976|Bacteroidetes S ComEC Rec2-related protein - - - ko:K02238 - M00429 - - ko00000,ko00002,ko02044 3.A.11.1,3.A.11.2 - - Competence,DUF4131 LIIFOLDO_02801 435591.BDI_1693 4.12e-254 696.0 COG0618@1|root,COG0618@2|Bacteria,4NEXE@976|Bacteroidetes,2FP4J@200643|Bacteroidia,22VYP@171551|Porphyromonadaceae 976|Bacteroidetes S domain protein nrnA - 3.1.13.3,3.1.3.7 ko:K06881 ko00920,ko01100,ko01120,map00920,map01100,map01120 - R00188,R00508 RC00078 ko00000,ko00001,ko01000,ko03400 - - - DHH,DHHA1 LIIFOLDO_02802 435591.BDI_1692 2.37e-135 383.0 2BU91@1|root,32PII@2|Bacteria,4NS5T@976|Bacteroidetes,2FUIA@200643|Bacteroidia,22YPW@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4827) - - - - - - - - - - - - DUF4827 LIIFOLDO_02803 435591.BDI_1691 0.0 900.0 COG1109@1|root,COG1109@2|Bacteria,4NG3H@976|Bacteroidetes,2FM6E@200643|Bacteroidia,22W7N@171551|Porphyromonadaceae 976|Bacteroidetes G Phosphoglucosamine mutase glmM - 5.4.2.8 ko:K01840 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 M00114 R01818 RC00408 ko00000,ko00001,ko00002,ko01000 - - - PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV LIIFOLDO_02804 435591.BDI_1690 0.0 982.0 COG2956@1|root,COG2956@2|Bacteria,4PKW8@976|Bacteroidetes,2G063@200643|Bacteroidia,2324R@171551|Porphyromonadaceae 976|Bacteroidetes G Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane - - - - - - - - - - - - - LIIFOLDO_02805 435591.BDI_1689 0.0 924.0 COG1387@1|root,COG1387@2|Bacteria,4NMBC@976|Bacteroidetes,2FNU7@200643|Bacteroidia,22ZUG@171551|Porphyromonadaceae 976|Bacteroidetes E Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080 LIIFOLDO_02807 435591.BDI_1366 0.0 877.0 COG1541@1|root,COG1541@2|Bacteria,4NGRR@976|Bacteroidetes,2FMB4@200643|Bacteroidia,22WWM@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) paaK - 6.2.1.30 ko:K01912 ko00360,ko01120,ko05111,map00360,map01120,map05111 - R02539 RC00004,RC00014 ko00000,ko00001,ko01000 - - - AMP-binding,AMP-binding_C_2 LIIFOLDO_02808 435591.BDI_1367 1.62e-91 268.0 COG4747@1|root,COG4747@2|Bacteria,4NQIW@976|Bacteroidetes,2FS2U@200643|Bacteroidia,22YFA@171551|Porphyromonadaceae 976|Bacteroidetes S ACT domain protein - - - - - - - - - - - - - LIIFOLDO_02809 411477.PARMER_01812 2.24e-19 79.0 2A7AX@1|root,30W7K@2|Bacteria,4P9K8@976|Bacteroidetes,2FUYZ@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_02810 435591.BDI_1368 0.0 1001.0 COG0591@1|root,COG0591@2|Bacteria,4NIH9@976|Bacteroidetes,2FPM7@200643|Bacteroidia 976|Bacteroidetes E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - ko:K03307 - - - - ko00000 2.A.21 - - SSF LIIFOLDO_02811 435591.BDI_1369 4.35e-174 488.0 COG0715@1|root,COG0715@2|Bacteria,4NVT8@976|Bacteroidetes,2FUZH@200643|Bacteroidia,230H5@171551|Porphyromonadaceae 976|Bacteroidetes P COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - ko:K02051 - M00188 - - ko00000,ko00002,ko02000 3.A.1.16,3.A.1.17 - - - LIIFOLDO_02812 435591.BDI_1370 0.0 873.0 COG0600@1|root,COG1116@1|root,COG0600@2|Bacteria,COG1116@2|Bacteria,4NR2E@976|Bacteroidetes,2FT4S@200643|Bacteroidia,22ZSQ@171551|Porphyromonadaceae 976|Bacteroidetes P Binding-protein-dependent transport system inner membrane component - - - ko:K02050 - M00188 - - ko00000,ko00002,ko02000 3.A.1.16,3.A.1.17 - - ABC_tran,BPD_transp_1 LIIFOLDO_02813 435591.BDI_1371 0.0 998.0 COG0642@1|root,COG2205@2|Bacteria,4NRWS@976|Bacteroidetes 976|Bacteroidetes T His Kinase A (phospho-acceptor) domain - - - - - - - - - - - - ABC_sub_bind,HATPase_c,HisKA,PAS_3,PAS_4 LIIFOLDO_02814 435591.BDI_1372 0.0 1355.0 COG2183@1|root,COG2183@2|Bacteria,4NETD@976|Bacteroidetes,2FMAZ@200643|Bacteroidia,22VY3@171551|Porphyromonadaceae 976|Bacteroidetes K Tex-like protein N-terminal domain yhgF - - ko:K06959 - - - - ko00000 - - - HHH_3,S1,Tex_N,Tex_YqgF LIIFOLDO_02815 435591.BDI_1373 1.68e-109 315.0 COG2606@1|root,COG2606@2|Bacteria,4NNGB@976|Bacteroidetes,2FMXW@200643|Bacteroidia,22XPG@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily ybaK - - ko:K03976 - - - - ko00000,ko01000,ko03016 - - - tRNA_edit LIIFOLDO_02816 435591.BDI_1374 6e-95 276.0 2EGY2@1|root,33AQ7@2|Bacteria,4NY9E@976|Bacteroidetes,2FSA3@200643|Bacteroidia,230TW@171551|Porphyromonadaceae 976|Bacteroidetes S Lipocalin-like domain - - - - - - - - - - - - Lipocalin_8 LIIFOLDO_02817 435591.BDI_1375 7.88e-131 372.0 COG3247@1|root,COG3247@2|Bacteria,4NQZ1@976|Bacteroidetes,2FMHV@200643|Bacteroidia,22YJF@171551|Porphyromonadaceae 976|Bacteroidetes S Short repeat of unknown function (DUF308) - - - - - - - - - - - - DUF308 LIIFOLDO_02819 435591.BDI_1376 3.44e-199 551.0 COG2207@1|root,COG2207@2|Bacteria,4NKDR@976|Bacteroidetes,2FP0U@200643|Bacteroidia,22Y8B@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix, arabinose operon control protein - - - - - - - - - - - - AraC_binding,HTH_18 LIIFOLDO_02820 435591.BDI_0525 0.0 883.0 COG1030@1|root,COG1030@2|Bacteria,4NGGV@976|Bacteroidetes,2FP4N@200643|Bacteroidia,22X22@171551|Porphyromonadaceae 976|Bacteroidetes O serine protease - - - ko:K07403 - - - - ko00000 - - - NfeD,Peptidase_S49,SDH_sah LIIFOLDO_02821 435591.BDI_0524 4.7e-150 422.0 COG2865@1|root,COG2865@2|Bacteria,4NGPG@976|Bacteroidetes,2FMWB@200643|Bacteroidia,22XSV@171551|Porphyromonadaceae 976|Bacteroidetes K Putative DNA-binding domain - - - - - - - - - - - - AlbA_2 LIIFOLDO_02822 435591.BDI_0523 0.0 1407.0 COG0475@1|root,COG0490@1|root,COG0475@2|Bacteria,COG0490@2|Bacteria,4NGF6@976|Bacteroidetes,2FNTX@200643|Bacteroidia,22WU6@171551|Porphyromonadaceae 976|Bacteroidetes P COG0475 Kef-type K transport systems, membrane components - - - ko:K03455 - - - - ko00000 2.A.37 - - Na_H_Exchanger,TrkA_C LIIFOLDO_02823 435591.BDI_0522 1.34e-180 502.0 COG1212@1|root,COG1212@2|Bacteria,4NG4B@976|Bacteroidetes,2FMHD@200643|Bacteroidia,22XG8@171551|Porphyromonadaceae 976|Bacteroidetes M Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria kdsB - 2.7.7.38 ko:K00979 ko00540,ko01100,map00540,map01100 M00063 R03351,R11396 RC00152,RC00910 ko00000,ko00001,ko00002,ko01000,ko01005 - - - CTP_transf_3 LIIFOLDO_02824 435591.BDI_0521 0.0 1130.0 28KYZ@1|root,2Z8XP@2|Bacteria,4NJNC@976|Bacteroidetes,2FQ6U@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_02825 435591.BDI_0520 0.0 1218.0 COG0706@1|root,COG0706@2|Bacteria,4NESJ@976|Bacteroidetes,2FN3A@200643|Bacteroidia,22WA9@171551|Porphyromonadaceae 976|Bacteroidetes U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins yidC - - ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044,ko03029 2.A.9 - - 60KD_IMP,YidC_periplas LIIFOLDO_02826 435591.BDI_0519 0.0 1074.0 COG0504@1|root,COG0504@2|Bacteria,4NEWT@976|Bacteroidetes,2FMC4@200643|Bacteroidia,22XB9@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates pyrG - 6.3.4.2 ko:K01937 ko00240,ko01100,map00240,map01100 M00052 R00571,R00573 RC00010,RC00074 ko00000,ko00001,ko00002,ko01000 - - - CTP_synth_N,GATase LIIFOLDO_02827 435591.BDI_0518 0.0 1026.0 COG3137@1|root,COG3137@2|Bacteria,4NRXD@976|Bacteroidetes,2FNZ5@200643|Bacteroidia,22XMW@171551|Porphyromonadaceae 976|Bacteroidetes M Protein of unknown function (DUF3078) - - - - - - - - - - - - DUF3078 LIIFOLDO_02829 435591.BDI_0324 0.0 1121.0 COG0367@1|root,COG0367@2|Bacteria,4NFQ3@976|Bacteroidetes,2FNDJ@200643|Bacteroidia,22WTD@171551|Porphyromonadaceae 976|Bacteroidetes E Glutamine amidotransferase domain asnB - 6.3.5.4 ko:K01953 ko00250,ko01100,ko01110,map00250,map01100,map01110 - R00578 RC00010 ko00000,ko00001,ko01000,ko01002 - - - Asn_synthase,GATase_7 LIIFOLDO_02830 435591.BDI_0325 0.0 963.0 COG0493@1|root,COG0493@2|Bacteria,4NG9R@976|Bacteroidetes,2FN6R@200643|Bacteroidia,22W9Q@171551|Porphyromonadaceae 976|Bacteroidetes C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster gltD - 1.4.1.13,1.4.1.14 ko:K00266 ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230 - R00093,R00114,R00248 RC00006,RC00010,RC02799 ko00000,ko00001,ko01000 - - - Fer4_20,Pyr_redox_2 LIIFOLDO_02831 435591.BDI_0326 0.0 2957.0 COG0067@1|root,COG0069@1|root,COG0070@1|root,COG0067@2|Bacteria,COG0069@2|Bacteria,COG0070@2|Bacteria,4NFKH@976|Bacteroidetes,2FNH9@200643|Bacteroidia,22W08@171551|Porphyromonadaceae 976|Bacteroidetes E GXGXG motif gltB - 1.4.1.13,1.4.1.14,1.4.7.1 ko:K00265,ko:K00284 ko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230 - R00021,R00093,R00114,R00248,R10086 RC00006,RC00010,RC02799 ko00000,ko00001,ko01000 - - - GATase_2,GXGXG,Glu_syn_central,Glu_synthase LIIFOLDO_02832 435591.BDI_0327 0.0 872.0 2E252@1|root,32XC3@2|Bacteria,4NTX9@976|Bacteroidetes,2FNDW@200643|Bacteroidia,22Z00@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3843) - - - - - - - - - - - - DUF3843 LIIFOLDO_02833 435591.BDI_0328 0.0 1874.0 COG1629@1|root,COG1629@2|Bacteria,COG4771@2|Bacteria,4NEIE@976|Bacteroidetes,2FMGF@200643|Bacteroidia,22X3J@171551|Porphyromonadaceae 976|Bacteroidetes P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarbopepD_reg_2,OMP_b-brl_3,Plug,TonB_dep_Rec LIIFOLDO_02834 435591.BDI_1153 0.0 2219.0 COG1413@1|root,COG1413@2|Bacteria,4NEZ7@976|Bacteroidetes,2FPRF@200643|Bacteroidia,22X0G@171551|Porphyromonadaceae 976|Bacteroidetes C Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080,HEAT_2 LIIFOLDO_02835 435591.BDI_1154 0.0 895.0 COG0673@1|root,COG0673@2|Bacteria,4NGHJ@976|Bacteroidetes,2FPMK@200643|Bacteroidia,22WUI@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA,GFO_IDH_MocA_C LIIFOLDO_02836 435591.BDI_1155 0.0 957.0 COG0673@1|root,COG0673@2|Bacteria,4NF3G@976|Bacteroidetes,2FN3V@200643|Bacteroidia,22VW2@171551|Porphyromonadaceae 976|Bacteroidetes S hydrolase activity, acting on glycosyl bonds nagA - - - - - - - - - - - GFO_IDH_MocA LIIFOLDO_02837 435591.BDI_1156 0.0 1033.0 COG3119@1|root,COG3119@2|Bacteria,4NFC9@976|Bacteroidetes,2FMH6@200643|Bacteroidia,22ZY3@171551|Porphyromonadaceae 976|Bacteroidetes P Domain of unknown function - - - - - - - - - - - - DUF4994,Sulfatase LIIFOLDO_02838 435591.BDI_1157 0.0 1011.0 COG1395@1|root,COG1395@2|Bacteria,4PMXW@976|Bacteroidetes,2G0K1@200643|Bacteroidia 976|Bacteroidetes K Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_02839 435591.BDI_1157 1.78e-35 132.0 COG1395@1|root,COG1395@2|Bacteria,4PMXW@976|Bacteroidetes,2G0K1@200643|Bacteroidia 976|Bacteroidetes K Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_02840 435591.BDI_1158 0.0 1968.0 COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,2FX80@200643|Bacteroidia,2324N@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_02841 693979.Bache_3266 3.83e-39 142.0 2C0NB@1|root,3422M@2|Bacteria,4P4DJ@976|Bacteroidetes,2FUYX@200643|Bacteroidia,4ASBV@815|Bacteroidaceae 976|Bacteroidetes S Domain of unknown function (DUF4493) - - - - - - - - - - - - DUF4493 LIIFOLDO_02842 435591.BDI_2791 0.0 1387.0 COG0073@1|root,COG0143@1|root,COG0073@2|Bacteria,COG0143@2|Bacteria,4NECB@976|Bacteroidetes,2FNV6@200643|Bacteroidia,22WAM@171551|Porphyromonadaceae 976|Bacteroidetes J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation metG - 6.1.1.10 ko:K01874 ko00450,ko00970,map00450,map00970 M00359,M00360 R03659,R04773 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Anticodon_1,tRNA-synt_1g,tRNA_bind LIIFOLDO_02843 435591.BDI_2790 7.64e-269 736.0 COG0399@1|root,COG0399@2|Bacteria,4NEBI@976|Bacteroidetes,2FPAJ@200643|Bacteroidia,22WTH@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the DegT DnrJ EryC1 family degT - - - - - - - - - - - DegT_DnrJ_EryC1 LIIFOLDO_02844 435591.BDI_2789 2.55e-250 686.0 COG0673@1|root,COG0673@2|Bacteria,4NFY3@976|Bacteroidetes,2FR8Q@200643|Bacteroidia,22XGS@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase, NAD-binding domain protein - - 1.1.1.335 ko:K13016 ko00520,map00520 - R10140 RC00182 ko00000,ko00001,ko01000,ko01005 - - - GFO_IDH_MocA,GFO_IDH_MocA_C LIIFOLDO_02845 1218076.BAYB01000036_gene5411 1.77e-59 206.0 COG3535@1|root,COG3535@2|Bacteria,1NCBV@1224|Proteobacteria,2VXH6@28216|Betaproteobacteria,1K1E2@119060|Burkholderiaceae 28216|Betaproteobacteria S Protein of unknown function (DUF917) - - - ko:K09703 - - - - ko00000 - - - DUF917 LIIFOLDO_02846 509191.AEDB02000094_gene4296 6.61e-17 95.1 COG3899@1|root,COG3899@2|Bacteria 2|Bacteria T PFAM Protein kinase domain - - - - - - - - - - - - AAA_16,GAF,GAF_2,GGDEF,Guanylate_cyc,HATPase_c,HisKA,HisKA_3,PAS_9,Pkinase,Response_reg LIIFOLDO_02847 435591.BDI_0443 1.32e-52 170.0 COG0776@1|root,COG0776@2|Bacteria,4NUQD@976|Bacteroidetes,2FS59@200643|Bacteroidia 976|Bacteroidetes L DNA-binding protein - - - - - - - - - - - - Bac_DNA_binding,HU-DNA_bdg LIIFOLDO_02848 435591.BDI_2788 9.62e-195 557.0 COG2244@1|root,COG2244@2|Bacteria,4NFKD@976|Bacteroidetes,2FNDA@200643|Bacteroidia,22WCM@171551|Porphyromonadaceae 976|Bacteroidetes S Polysaccharide biosynthesis protein - - - - - - - - - - - - Polysacc_synt_3,Polysacc_synt_C LIIFOLDO_02849 435591.BDI_2722 3.16e-137 389.0 COG2431@1|root,COG2431@2|Bacteria,4NP9I@976|Bacteroidetes,2G2FG@200643|Bacteroidia,231WF@171551|Porphyromonadaceae 976|Bacteroidetes S Lysine exporter LysO - - - - - - - - - - - - Lys_export LIIFOLDO_02850 435591.BDI_2721 5.8e-59 183.0 2DNN4@1|root,32Y7W@2|Bacteria,4NVDD@976|Bacteroidetes,2FTTH@200643|Bacteroidia,231R7@171551|Porphyromonadaceae 976|Bacteroidetes S Lysine exporter LysO - - - - - - - - - - - - Lys_export LIIFOLDO_02851 435591.BDI_2720 0.0 2114.0 COG0793@1|root,COG4946@1|root,COG0793@2|Bacteria,COG4946@2|Bacteria,4NGU2@976|Bacteroidetes,2FPGA@200643|Bacteroidia,22XI5@171551|Porphyromonadaceae 976|Bacteroidetes M Tricorn protease homolog - - - ko:K08676 - - - - ko00000,ko01000,ko01002 - - - PD40,Peptidase_S41,Tricorn_C1,Tricorn_PDZ LIIFOLDO_02852 435591.BDI_2719 7.73e-132 373.0 COG0847@1|root,COG0847@2|Bacteria,4NEQX@976|Bacteroidetes,2FQEU@200643|Bacteroidia,22Y8S@171551|Porphyromonadaceae 976|Bacteroidetes L DNA polymerase III - - 2.7.7.7 ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DUF5051,RNase_T LIIFOLDO_02853 435591.BDI_2718 1.08e-240 666.0 COG1301@1|root,COG1301@2|Bacteria,4NE5X@976|Bacteroidetes,2FP3G@200643|Bacteroidia,22X00@171551|Porphyromonadaceae 976|Bacteroidetes U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family sstT - - - - - - - - - - - SDF LIIFOLDO_02854 435591.BDI_2717 0.0 910.0 COG1757@1|root,COG1757@2|Bacteria,4NFQT@976|Bacteroidetes,2FNIY@200643|Bacteroidia,22WAI@171551|Porphyromonadaceae 976|Bacteroidetes C Na+/H+ antiporter family nhaC - - ko:K03315 - - - - ko00000,ko02000 2.A.35 - - Na_H_antiporter LIIFOLDO_02855 435591.BDI_2716 1.31e-314 860.0 COG1757@1|root,COG1757@2|Bacteria,4NFQT@976|Bacteroidetes,2FNIY@200643|Bacteroidia,22WAI@171551|Porphyromonadaceae 976|Bacteroidetes C Na+/H+ antiporter family nhaC - - ko:K03315 - - - - ko00000,ko02000 2.A.35 - - Na_H_antiporter LIIFOLDO_02856 435591.BDI_2715 3.87e-237 651.0 28HM4@1|root,2Z7VS@2|Bacteria,4NGBW@976|Bacteroidetes,2FPDI@200643|Bacteroidia,22WES@171551|Porphyromonadaceae 976|Bacteroidetes S Putative carbohydrate metabolism domain - - - - - - - - - - - - PCMD LIIFOLDO_02857 435591.BDI_2714 2.6e-179 499.0 28JFC@1|root,2Z999@2|Bacteria,4NH4Q@976|Bacteroidetes,2FXAX@200643|Bacteroidia 976|Bacteroidetes S MvaI/BcnI restriction endonuclease family - - - - - - - - - - - - MvaI_BcnI LIIFOLDO_02858 435591.BDI_2713 1.17e-61 189.0 COG1476@1|root,COG1476@2|Bacteria,4PMY8@976|Bacteroidetes,2FZKA@200643|Bacteroidia 976|Bacteroidetes K Helix-turn-helix XRE-family like proteins - - - ko:K07729 - - - - ko00000,ko03000 - - - - LIIFOLDO_02859 435591.BDI_3114 1.07e-123 353.0 COG1595@1|root,COG1595@2|Bacteria,4NTFR@976|Bacteroidetes,2FU9G@200643|Bacteroidia,230JX@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 LIIFOLDO_02860 435591.BDI_3115 9.28e-224 618.0 COG3712@1|root,COG3712@2|Bacteria,4NRDD@976|Bacteroidetes,2FTJU@200643|Bacteroidia 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR LIIFOLDO_02861 435591.BDI_3116 0.0 2262.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec LIIFOLDO_02862 435591.BDI_3117 0.0 1118.0 COG0457@1|root,COG0457@2|Bacteria,4NDX0@976|Bacteroidetes,2FM6J@200643|Bacteroidia,22X1X@171551|Porphyromonadaceae 976|Bacteroidetes S SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_02863 435591.BDI_3118 0.0 1139.0 2DBG1@1|root,2Z91R@2|Bacteria,4NJ1M@976|Bacteroidetes,2FQVM@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_02864 435591.BDI_3119 0.0 998.0 28JHT@1|root,2Z9BA@2|Bacteria,4NIPT@976|Bacteroidetes 976|Bacteroidetes S Domain of Unknown Function with PDB structure (DUF3863) - - - - - - - - - - - - DUF3863,DUF3864 LIIFOLDO_02865 435591.BDI_3120 0.0 1248.0 COG3250@1|root,COG3250@2|Bacteria,4NFPC@976|Bacteroidetes,2FPUZ@200643|Bacteroidia,22WX3@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the glycosyl hydrolase 2 family - - - - - - - - - - - - Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N,VCBS LIIFOLDO_02866 435591.BDI_2012 5.75e-89 261.0 COG1396@1|root,COG1396@2|Bacteria,4NVQ0@976|Bacteroidetes,2G3CW@200643|Bacteroidia,22YSW@171551|Porphyromonadaceae 976|Bacteroidetes K Helix-turn-helix domain - - - - - - - - - - - - HTH_19,HTH_3 LIIFOLDO_02867 435591.BDI_2011 9.5e-201 555.0 COG0266@1|root,COG0266@2|Bacteria,4NIT4@976|Bacteroidetes,2FPIR@200643|Bacteroidia,22Y1D@171551|Porphyromonadaceae 976|Bacteroidetes L Formamidopyrimidine-DNA glycosylase H2TH domain - - 3.2.2.23,4.2.99.18 ko:K10563 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - Fapy_DNA_glyco,H2TH,zf-FPG_IleRS LIIFOLDO_02868 435591.BDI_2010 4.3e-230 634.0 2DUT2@1|root,33S4D@2|Bacteria,4P0PT@976|Bacteroidetes,2FPMZ@200643|Bacteroidia 976|Bacteroidetes S Fimbrillin-like - - - - - - - - - - - - Mfa_like_1 LIIFOLDO_02869 435591.BDI_2009 8.41e-107 308.0 COG4319@1|root,COG4319@2|Bacteria,4NT6G@976|Bacteroidetes,2FTV9@200643|Bacteroidia,22YRG@171551|Porphyromonadaceae 976|Bacteroidetes S Calcium/calmodulin dependent protein kinase II association domain - - - - - - - - - - - - DUF4440 LIIFOLDO_02870 435591.BDI_2008 1.46e-207 574.0 COG2207@1|root,COG2207@2|Bacteria,4NMPG@976|Bacteroidetes,2G2TB@200643|Bacteroidia,22XRK@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix, arabinose operon control protein - - - - - - - - - - - - AraC_binding,HTH_18 LIIFOLDO_02871 435591.BDI_2007 1.6e-294 802.0 COG2382@1|root,COG2382@2|Bacteria,4NF50@976|Bacteroidetes,2FMIP@200643|Bacteroidia,230G0@171551|Porphyromonadaceae 976|Bacteroidetes P Putative esterase - - - ko:K07214 - - - - ko00000 - - - Esterase LIIFOLDO_02872 435591.BDI_2006 0.0 927.0 COG2067@1|root,COG2067@2|Bacteria,4NKM1@976|Bacteroidetes,2FPD4@200643|Bacteroidia,22XAC@171551|Porphyromonadaceae 976|Bacteroidetes I Psort location OuterMembrane, score 9.52 - - - ko:K06076 - - - - ko00000,ko02000 1.B.9 - - OMP_b-brl LIIFOLDO_02873 435591.BDI_2005 0.0 1768.0 COG0058@1|root,COG0058@2|Bacteria,4NGR1@976|Bacteroidetes,2FNN5@200643|Bacteroidia,22WPC@171551|Porphyromonadaceae 976|Bacteroidetes G alpha-glucan phosphorylase glgP - 2.4.1.1,2.4.1.11,2.4.1.8 ko:K00688,ko:K00691,ko:K16153 ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931 - R00292,R01555,R02111 RC00005,RC00049 ko00000,ko00001,ko01000,ko01003 - GH65,GT3,GT35 - DUF3417,Glycogen_syn,Phosphorylase LIIFOLDO_02874 435591.BDI_2004 0.0 1122.0 COG0297@1|root,COG0297@2|Bacteria,4PKEP@976|Bacteroidetes,2FNMM@200643|Bacteroidia,22W3T@171551|Porphyromonadaceae 976|Bacteroidetes G starch synthase - - 2.4.1.11 ko:K00693 ko00500,ko01100,ko04151,ko04152,ko04910,ko04922,ko04931,map00500,map01100,map04151,map04152,map04910,map04922,map04931 - R00292 RC00005 ko00000,ko00001,ko01000,ko01003 - GT3 - Glycogen_syn LIIFOLDO_02875 435591.BDI_3699 0.0 1732.0 COG4775@1|root,COG4775@2|Bacteria,4NE6Z@976|Bacteroidetes,2FM76@200643|Bacteroidia,22WYU@171551|Porphyromonadaceae 976|Bacteroidetes M membrane yaeT - - ko:K07277 - - - - ko00000,ko02000,ko03029 1.B.33 - - Bac_surface_Ag,POTRA LIIFOLDO_02876 435591.BDI_3698 5.22e-174 485.0 COG0020@1|root,COG0020@2|Bacteria,4NF2B@976|Bacteroidetes,2FMM4@200643|Bacteroidia,22WWT@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids uppS GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 ko:K00806 ko00900,ko01110,map00900,map01110 - R06447 RC00279,RC02839 ko00000,ko00001,ko01000,ko01006 - - - Prenyltransf LIIFOLDO_02877 435591.BDI_3697 6.66e-175 486.0 COG3637@1|root,COG3637@2|Bacteria,4NF6B@976|Bacteroidetes,2FQWF@200643|Bacteroidia,22XT6@171551|Porphyromonadaceae 976|Bacteroidetes M Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - - - - - - - - - - OMP_b-brl LIIFOLDO_02878 435591.BDI_3696 0.0 865.0 COG1621@1|root,COG1621@2|Bacteria,4NTHV@976|Bacteroidetes,2FPZA@200643|Bacteroidia,22YEN@171551|Porphyromonadaceae 976|Bacteroidetes G COG NOG27066 non supervised orthologous group - - - - - - - - - - - - - LIIFOLDO_02879 435591.BDI_3695 2.27e-247 680.0 COG0117@1|root,COG1985@1|root,COG0117@2|Bacteria,COG1985@2|Bacteria,4NFJE@976|Bacteroidetes,2FM4R@200643|Bacteroidia,22WQZ@171551|Porphyromonadaceae 976|Bacteroidetes H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate ribD - 1.1.1.193,3.5.4.26 ko:K11752 ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024 M00125 R03458,R03459 RC00204,RC00933 ko00000,ko00001,ko00002,ko01000 - - - RibD_C,dCMP_cyt_deam_1 LIIFOLDO_02880 435591.BDI_3694 2.49e-228 629.0 COG2890@1|root,COG2890@2|Bacteria,4NDZB@976|Bacteroidetes,2FM3H@200643|Bacteroidia,22XPT@171551|Porphyromonadaceae 976|Bacteroidetes J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif prmC GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 ko:K02493 - - R10806 RC00003,RC03279 ko00000,ko01000,ko03012 - - - MTS LIIFOLDO_02881 435591.BDI_3693 1.47e-115 331.0 COG2137@1|root,COG2137@2|Bacteria,4NSAS@976|Bacteroidetes,2FS4X@200643|Bacteroidia,22YE0@171551|Porphyromonadaceae 976|Bacteroidetes S Modulates RecA activity recX - - ko:K03565 - - - - ko00000,ko03400 - - - RecX LIIFOLDO_02882 435591.BDI_3692 3.85e-167 466.0 COG1040@1|root,COG1040@2|Bacteria,4NNI1@976|Bacteroidetes,2FP14@200643|Bacteroidia,22XYS@171551|Porphyromonadaceae 976|Bacteroidetes S Phosphoribosyl transferase domain comF - 2.4.2.14 ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048 R01072 RC00010,RC02724,RC02752 ko00000,ko00001,ko00002,ko01000,ko01002 - - - Pribosyltran LIIFOLDO_02883 435591.BDI_3691 1.51e-146 413.0 COG0461@1|root,COG0461@2|Bacteria,4NEF8@976|Bacteroidetes,2FMTB@200643|Bacteroidia,22XEK@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) pyrE - 2.4.2.10,4.1.1.23 ko:K00762,ko:K13421 ko00240,ko00983,ko01100,map00240,map00983,map01100 M00051 R00965,R01870,R08231 RC00063,RC00409,RC00611 ko00000,ko00001,ko00002,ko01000 - - - OMPdecase,Pribosyltran LIIFOLDO_02884 435591.BDI_3690 1.03e-92 271.0 COG3427@1|root,COG3427@2|Bacteria,4NT9F@976|Bacteroidetes,2G2KQ@200643|Bacteroidia,231XE@171551|Porphyromonadaceae 976|Bacteroidetes E oxidoreductase activity, acting on CH-OH group of donors - - - - - - - - - - - - Polyketide_cyc2 LIIFOLDO_02885 435591.BDI_3689 0.0 875.0 COG0165@1|root,COG0165@2|Bacteria,4NFCY@976|Bacteroidetes,2FPNB@200643|Bacteroidia,22WJN@171551|Porphyromonadaceae 976|Bacteroidetes E argininosuccinate lyase argH GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 ko:K01755 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230 M00029,M00844,M00845 R01086 RC00445,RC00447 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Lyase_1 LIIFOLDO_02886 435591.BDI_3688 6.85e-103 298.0 COG2146@1|root,COG2146@2|Bacteria,4NYDD@976|Bacteroidetes,2G1I1@200643|Bacteroidia,22YWT@171551|Porphyromonadaceae 976|Bacteroidetes P nitrite reductase [NAD(P)H] activity - - - - - - - - - - - - - LIIFOLDO_02887 435591.BDI_2634 3.62e-12 65.9 COG5464@1|root,COG5464@2|Bacteria,4NHVS@976|Bacteroidetes,2G317@200643|Bacteroidia,22Y25@171551|Porphyromonadaceae 976|Bacteroidetes S PD-(D/E)XK nuclease family transposase - - - - - - - - - - - - PDDEXK_2 LIIFOLDO_02888 435591.BDI_2635 5.48e-189 524.0 COG0496@1|root,COG0496@2|Bacteria,4NEJ5@976|Bacteroidetes,2FMRR@200643|Bacteroidia,22WSZ@171551|Porphyromonadaceae 976|Bacteroidetes S Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates surE - 3.1.3.5 ko:K03787 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 - R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346 RC00017 ko00000,ko00001,ko01000 - - - SurE LIIFOLDO_02889 435591.BDI_2636 6.82e-274 749.0 COG0763@1|root,COG0763@2|Bacteria,4NDW3@976|Bacteroidetes,2FPE5@200643|Bacteroidia,22WGC@171551|Porphyromonadaceae 976|Bacteroidetes M Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell lpxB - 2.4.1.182 ko:K00748 ko00540,ko01100,map00540,map01100 M00060 R04606 RC00005,RC00059 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 - GT19 - LpxB LIIFOLDO_02890 435591.BDI_2637 7.48e-186 516.0 2CJZ2@1|root,32SB4@2|Bacteria,4NSR3@976|Bacteroidetes,2FQ7M@200643|Bacteroidia,22YHG@171551|Porphyromonadaceae 976|Bacteroidetes S NigD-like N-terminal OB domain - - - - - - - - - - - - NigD_C,NigD_N LIIFOLDO_02891 435591.BDI_2638 1.51e-122 349.0 COG1595@1|root,COG1595@2|Bacteria,4NFXX@976|Bacteroidetes,2FTUP@200643|Bacteroidia,22YDU@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 LIIFOLDO_02892 435591.BDI_2639 4.49e-117 336.0 2EPCT@1|root,33GZF@2|Bacteria,4NZ8X@976|Bacteroidetes,2FVPB@200643|Bacteroidia,22Z27@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_02893 435591.BDI_2640 5.39e-201 563.0 COG3595@1|root,COG3595@2|Bacteria,4NEUW@976|Bacteroidetes,2FV2Q@200643|Bacteroidia,22YZE@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_02895 435591.BDI_2642 1.54e-125 358.0 COG1595@1|root,COG1595@2|Bacteria,4NQE0@976|Bacteroidetes,2FP26@200643|Bacteroidia,22YGU@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 rpoE - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 LIIFOLDO_02896 435591.BDI_2643 1.3e-85 253.0 2E9VD@1|root,33417@2|Bacteria,4NUX3@976|Bacteroidetes,2FV7P@200643|Bacteroidia,22Z0B@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_02897 435591.BDI_2644 0.0 1130.0 COG0673@1|root,COG0673@2|Bacteria,4NF4Q@976|Bacteroidetes,2FQ86@200643|Bacteroidia,22X9Z@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA,GFO_IDH_MocA_C LIIFOLDO_02898 435591.BDI_2645 3.21e-120 343.0 295NE@1|root,2ZSZT@2|Bacteria,4NPQK@976|Bacteroidetes,2FSXA@200643|Bacteroidia,22Y9N@171551|Porphyromonadaceae 976|Bacteroidetes S DoxX - - 1.8.5.2 ko:K16937 ko00920,ko01120,map00920,map01120 - R07177 - ko00000,ko00001,ko01000 3.D.4.9 - - DoxX LIIFOLDO_02899 435591.BDI_2646 1.54e-189 528.0 COG2152@1|root,COG2152@2|Bacteria,4NGDZ@976|Bacteroidetes,2FPFW@200643|Bacteroidia,22WNS@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080 LIIFOLDO_02900 435591.BDI_2647 0.0 1044.0 COG0673@1|root,COG0673@2|Bacteria,4NEN5@976|Bacteroidetes,2FP28@200643|Bacteroidia,22ZVD@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA,GFO_IDH_MocA_C,TAT_signal LIIFOLDO_02901 435591.BDI_2294 6.5e-311 862.0 COG2356@1|root,COG2356@2|Bacteria,4PM12@976|Bacteroidetes,2FUP2@200643|Bacteroidia 976|Bacteroidetes L endonuclease I - - - - - - - - - - - - - LIIFOLDO_02902 762968.HMPREF9441_02811 7.12e-25 95.5 2DFYI@1|root,2ZTRQ@2|Bacteria,4P8Y6@976|Bacteroidetes,2FZD8@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_02903 435591.BDI_2296 5.16e-72 216.0 COG2026@1|root,COG2026@2|Bacteria,4NW0W@976|Bacteroidetes,2FYK8@200643|Bacteroidia 976|Bacteroidetes DJ Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - RelE LIIFOLDO_02904 435591.BDI_2297 2.32e-111 320.0 COG0394@1|root,COG0394@2|Bacteria,4NNQZ@976|Bacteroidetes,2FM80@200643|Bacteroidia,22Y5T@171551|Porphyromonadaceae 976|Bacteroidetes T Belongs to the low molecular weight phosphotyrosine protein phosphatase family ptpA - 3.1.3.48 ko:K01104 - - - - ko00000,ko01000 - - - LMWPc LIIFOLDO_02905 435591.BDI_2298 0.0 1616.0 COG1198@1|root,COG1198@2|Bacteria,4NFHB@976|Bacteroidetes,2FN6Z@200643|Bacteroidia,22WDT@171551|Porphyromonadaceae 976|Bacteroidetes L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA priA - - ko:K04066 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - DEAD,Helicase_C,ResIII LIIFOLDO_02906 435591.BDI_2299 8.41e-140 395.0 COG3637@1|root,COG3637@2|Bacteria,4NSVH@976|Bacteroidetes,2FS20@200643|Bacteroidia,22YH7@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl,OMP_b-brl_2 LIIFOLDO_02907 435591.BDI_2301 1.52e-205 568.0 COG5146@1|root,COG5146@2|Bacteria,4P0U7@976|Bacteroidetes,2FMS4@200643|Bacteroidia 976|Bacteroidetes H Pantothenate kinase - - 2.7.1.33 ko:K09680 ko00770,ko01100,map00770,map01100 M00120 R02971,R03018,R04391 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - Fumble LIIFOLDO_02908 435591.BDI_2302 0.0 1422.0 COG1884@1|root,COG2185@1|root,COG1884@2|Bacteria,COG2185@2|Bacteria,4NFS0@976|Bacteroidetes,2FNWM@200643|Bacteroidia,22WFX@171551|Porphyromonadaceae 976|Bacteroidetes I Methylmalonyl-CoA mutase mutB - 5.4.99.2 ko:K01847 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 M00373,M00376,M00741 R00833 RC00395 ko00000,ko00001,ko00002,ko01000 - - - B12-binding,MM_CoA_mutase LIIFOLDO_02909 435591.BDI_2303 0.0 1014.0 COG1884@1|root,COG1884@2|Bacteria,4NDVE@976|Bacteroidetes,2FM0R@200643|Bacteroidia,22X3V@171551|Porphyromonadaceae 976|Bacteroidetes I Methylmalonyl-CoA mutase mutA - 5.4.99.2 ko:K01847 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 M00373,M00376,M00741 R00833 RC00395 ko00000,ko00001,ko00002,ko01000 - - - MM_CoA_mutase LIIFOLDO_02910 435591.BDI_3940 2.65e-268 734.0 2DWGN@1|root,3408J@2|Bacteria,4P42X@976|Bacteroidetes,2FYH1@200643|Bacteroidia,2316Z@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - DUF4852 LIIFOLDO_02911 435591.BDI_3941 1.48e-248 682.0 COG0611@1|root,COG0611@2|Bacteria,4NDUT@976|Bacteroidetes,2FN7K@200643|Bacteroidia,22VV5@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 thiL - 2.7.4.16 ko:K00946 ko00730,ko01100,map00730,map01100 M00127 R00617 RC00002 ko00000,ko00001,ko00002,ko01000 - - - AIRS,AIRS_C LIIFOLDO_02912 435591.BDI_3942 1.37e-269 737.0 COG1663@1|root,COG1663@2|Bacteria,4NE2I@976|Bacteroidetes,2FN2X@200643|Bacteroidia,22WXK@171551|Porphyromonadaceae 976|Bacteroidetes F Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) lpxK - 2.7.1.130 ko:K00912 ko00540,ko01100,map00540,map01100 M00060 R04657 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000,ko01005 - - - LpxK LIIFOLDO_02913 435591.BDI_3943 0.0 1118.0 COG0616@1|root,COG0616@2|Bacteria,4NES1@976|Bacteroidetes,2FMR0@200643|Bacteroidia,22WA3@171551|Porphyromonadaceae 976|Bacteroidetes OU signal peptide peptidase SppA, 67K type sppA - - ko:K04773 - - - - ko00000,ko01000,ko01002 - - - Peptidase_S49 LIIFOLDO_02914 435591.BDI_3944 3.06e-237 651.0 COG4360@1|root,COG4360@2|Bacteria,4NHAH@976|Bacteroidetes,2FMAC@200643|Bacteroidia,22WKR@171551|Porphyromonadaceae 976|Bacteroidetes F Domain of unknown function (DUF4922) - - - - - - - - - - - - DUF4922 LIIFOLDO_02915 435591.BDI_3945 0.0 990.0 COG0463@1|root,COG0463@2|Bacteria,4NEQ9@976|Bacteroidetes,2G2IE@200643|Bacteroidia,22WXI@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyl transferase family 2 - - - - - - - - - - - - DUF4922,Glycos_transf_2,SpoIID LIIFOLDO_02916 435591.BDI_3946 0.0 1946.0 COG0860@1|root,COG0860@2|Bacteria,4NEZ9@976|Bacteroidetes,2FMX1@200643|Bacteroidia,22X0M@171551|Porphyromonadaceae 976|Bacteroidetes M Fibronectin type 3 domain - - - - - - - - - - - - Amidase_3 LIIFOLDO_02917 435591.BDI_0841 2.77e-219 605.0 COG0540@1|root,COG0540@2|Bacteria,4NFIU@976|Bacteroidetes,2FN60@200643|Bacteroidia,22W4C@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the ATCase OTCase family pyrB - 2.1.3.2 ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R01397 RC00064,RC02850 ko00000,ko00001,ko00002,ko01000 - - - OTCace,OTCace_N LIIFOLDO_02918 435591.BDI_0840 1.45e-107 310.0 COG1781@1|root,COG1781@2|Bacteria,4NP1H@976|Bacteroidetes,2G380@200643|Bacteroidia,2320K@171551|Porphyromonadaceae 976|Bacteroidetes F Involved in allosteric regulation of aspartate carbamoyltransferase pyrI - - ko:K00610 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R01397 RC00064,RC02850 ko00000,ko00001,ko00002 - - - PyrI,PyrI_C LIIFOLDO_02919 435591.BDI_0839 7.99e-142 399.0 COG1853@1|root,COG1853@2|Bacteria,4NF4H@976|Bacteroidetes,2FMUN@200643|Bacteroidia,22W3S@171551|Porphyromonadaceae 976|Bacteroidetes S flavin reductase - - - - - - - - - - - - Flavin_Reduct LIIFOLDO_02920 435591.BDI_0838 5.65e-170 474.0 2AR7H@1|root,31GH7@2|Bacteria,4NQXT@976|Bacteroidetes,2FQE3@200643|Bacteroidia 976|Bacteroidetes S COG NOG27381 non supervised orthologous group - - - - - - - - - - - - OMP_b-brl_2 LIIFOLDO_02921 435591.BDI_0837 1.06e-294 805.0 COG1253@1|root,COG1253@2|Bacteria,4NE9R@976|Bacteroidetes,2FN9R@200643|Bacteroidia,22W70@171551|Porphyromonadaceae 976|Bacteroidetes P Transporter associated domain corC_1 - - ko:K03699 - - - - ko00000,ko02042 - - - CBS,CorC_HlyC,DUF21 LIIFOLDO_02922 435591.BDI_0836 3.22e-246 676.0 COG0016@1|root,COG0016@2|Bacteria,4NF8I@976|Bacteroidetes,2FNZN@200643|Bacteroidia,22W2R@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily pheS GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 ko:K01889 ko00970,map00970 M00359,M00360 R03660 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Phe_tRNA-synt_N,tRNA-synt_2d LIIFOLDO_02924 1235803.C825_04845 1.33e-39 145.0 COG3391@1|root,COG3391@2|Bacteria,4NVA3@976|Bacteroidetes,2FMCK@200643|Bacteroidia,22Z24@171551|Porphyromonadaceae 976|Bacteroidetes S 6-bladed beta-propeller - - - - - - - - - - - - DUF4934,DUF5128 LIIFOLDO_02925 435591.BDI_0833 3.66e-282 779.0 COG3064@1|root,COG4219@1|root,COG3064@2|Bacteria,COG4219@2|Bacteria,4NDWS@976|Bacteroidetes,2FNCU@200643|Bacteroidia,22W9Z@171551|Porphyromonadaceae 976|Bacteroidetes KT BlaR1 peptidase M56 - - - - - - - - - - - - CarbopepD_reg_2,Peptidase_M56,Plug,TonB_C LIIFOLDO_02926 435591.BDI_0832 3.5e-81 240.0 COG3682@1|root,COG3682@2|Bacteria,4NT4V@976|Bacteroidetes,2FSIM@200643|Bacteroidia,22Y78@171551|Porphyromonadaceae 976|Bacteroidetes K Penicillinase repressor - - - - - - - - - - - - Penicillinase_R LIIFOLDO_02927 435591.BDI_0831 1.29e-95 279.0 COG0636@1|root,COG0636@2|Bacteria,4NQ9J@976|Bacteroidetes,2G39F@200643|Bacteroidia,22Y8P@171551|Porphyromonadaceae 976|Bacteroidetes C ATPase, subunit K - - - ko:K02124 ko00190,ko01100,map00190,map01100 M00159 - - ko00000,ko00001,ko00002 3.A.2.2,3.A.2.3 - - ATP-synt_C LIIFOLDO_02928 435591.BDI_0830 0.0 1176.0 COG1269@1|root,COG1269@2|Bacteria,4NGJ9@976|Bacteroidetes,2FMC6@200643|Bacteroidia,22X61@171551|Porphyromonadaceae 976|Bacteroidetes U Belongs to the V-ATPase 116 kDa subunit family - - - ko:K02123 ko00190,ko01100,map00190,map01100 M00159 - - ko00000,ko00001,ko00002 3.A.2.2,3.A.2.3 - - V_ATPase_I LIIFOLDO_02929 435591.BDI_0829 1.28e-121 349.0 COG1394@1|root,COG1394@2|Bacteria,4NMF2@976|Bacteroidetes,2FM0M@200643|Bacteroidia,22X0S@171551|Porphyromonadaceae 976|Bacteroidetes C ATP synthase subunit D - - - ko:K02120 ko00190,ko01100,map00190,map01100 M00159 - - ko00000,ko00001,ko00002 3.A.2.2,3.A.2.3 - - ATP-synt_D LIIFOLDO_02930 435591.BDI_1996 0.0 1015.0 COG1530@1|root,COG1530@2|Bacteria,4NED1@976|Bacteroidetes,2FMXV@200643|Bacteroidia,22WM6@171551|Porphyromonadaceae 976|Bacteroidetes J ribonuclease G rng - - ko:K08301 - - - - ko00000,ko01000,ko03009,ko03019 - - - RNase_E_G,S1 LIIFOLDO_02931 435591.BDI_1997 0.0 1203.0 COG0443@1|root,COG0443@2|Bacteria,4NERF@976|Bacteroidetes,2FMNH@200643|Bacteroidia,22VY9@171551|Porphyromonadaceae 976|Bacteroidetes O Heat shock 70 kDa protein dnaK - - ko:K04043 ko03018,ko04212,ko05152,map03018,map04212,map05152 - - - ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 1.A.33.1 - - HSP70 LIIFOLDO_02932 435591.BDI_1998 0.0 1249.0 COG0642@1|root,COG2984@1|root,COG2205@2|Bacteria,COG2984@2|Bacteria,4NKBC@976|Bacteroidetes,2FNE0@200643|Bacteroidia,22WMG@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase-like ATPases - - - - - - - - - - - - HATPase_c,HisKA LIIFOLDO_02933 435591.BDI_1999 0.0 1520.0 COG0642@1|root,COG2205@2|Bacteria,4NRWS@976|Bacteroidetes,2G2UT@200643|Bacteroidia,231JY@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - ABC_sub_bind,HATPase_c,HisKA,PAS_3 LIIFOLDO_02934 435591.BDI_2000 8.16e-304 828.0 COG0477@1|root,COG2814@2|Bacteria,4NG5F@976|Bacteroidetes,2FPA7@200643|Bacteroidia,22WH2@171551|Porphyromonadaceae 976|Bacteroidetes EGP BT1 family - - - ko:K08218 ko01501,map01501 M00628 - - ko00000,ko00001,ko00002,ko02000 2.A.1.25 - - BT1,MFS_1 LIIFOLDO_02935 435591.BDI_2001 1.99e-194 538.0 COG0388@1|root,COG0388@2|Bacteria,4NE37@976|Bacteroidetes,2FPG4@200643|Bacteroidia,22XFQ@171551|Porphyromonadaceae 976|Bacteroidetes S Hydrolase, carbon-nitrogen family ramA_1 - 3.5.1.3 ko:K13566 ko00250,map00250 - R00269,R00348 RC00010 ko00000,ko00001,ko01000 - - - CN_hydrolase LIIFOLDO_02936 435591.BDI_2002 2.96e-129 366.0 COG0204@1|root,COG0204@2|Bacteria,4NNG7@976|Bacteroidetes,2FM7Q@200643|Bacteroidia,22Y0H@171551|Porphyromonadaceae 976|Bacteroidetes I Acyltransferase - - - - - - - - - - - - Acyltransferase LIIFOLDO_02937 435591.BDI_2003 5.36e-62 191.0 2CJP4@1|root,33FB6@2|Bacteria,4NWNA@976|Bacteroidetes,2FUPW@200643|Bacteroidia,22YY0@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG23371 non supervised orthologous group - - - - - - - - - - - - - LIIFOLDO_02938 999419.HMPREF1077_02710 0.0 962.0 COG0436@1|root,COG0436@2|Bacteria,4NH2Y@976|Bacteroidetes,2FPZN@200643|Bacteroidia,22X90@171551|Porphyromonadaceae 976|Bacteroidetes E Aminotransferase class I and II aspD - 4.1.1.12 ko:K09758 ko00250,ko00270,ko01100,ko01230,map00250,map00270,map01100,map01230 - R00397,R00863 RC00282,RC00399,RC00400 ko00000,ko00001,ko01000 - - - Aminotran_1_2 LIIFOLDO_02939 435591.BDI_1071 0.0 1097.0 COG2985@1|root,COG2985@2|Bacteria,4NHM3@976|Bacteroidetes,2FQ85@200643|Bacteroidia,22X4N@171551|Porphyromonadaceae 976|Bacteroidetes S Predicted Permease Membrane Region aspT - - ko:K07085 - - - - ko00000 2.A.81 - - Asp-Al_Ex,TrkA_C LIIFOLDO_02940 435591.BDI_1070 6e-216 596.0 COG4822@1|root,COG4822@2|Bacteria,4NEGU@976|Bacteroidetes,2FNCV@200643|Bacteroidia,22WTQ@171551|Porphyromonadaceae 976|Bacteroidetes H CbiX cbiK - 4.99.1.3 ko:K02190 ko00860,ko01100,map00860,map01100 - R05807 RC01012 ko00000,ko00001,ko01000 - - - CbiK LIIFOLDO_02941 435591.BDI_1069 0.0 1596.0 COG4774@1|root,COG4774@2|Bacteria,4PKB5@976|Bacteroidetes,2FNRN@200643|Bacteroidia,22WV9@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - Plug,TonB_dep_Rec LIIFOLDO_02942 435591.BDI_1068 0.0 992.0 COG3182@1|root,COG3182@2|Bacteria,4NHAP@976|Bacteroidetes,2FPHN@200643|Bacteroidia,22X9T@171551|Porphyromonadaceae 976|Bacteroidetes S PepSY domain protein - - - - - - - - - - - - PepSY_TM LIIFOLDO_02943 435591.BDI_1067 0.0 930.0 COG1010@1|root,COG2082@1|root,COG1010@2|Bacteria,COG2082@2|Bacteria,4NIR7@976|Bacteroidetes,2FP3F@200643|Bacteroidia,22WHE@171551|Porphyromonadaceae 976|Bacteroidetes H Precorrin-3B C(17)-methyltransferase cobJ - 5.4.99.60,5.4.99.61 ko:K06042 ko00860,ko01100,map00860,map01100 - R05177,R05814 RC01292,RC01980 ko00000,ko00001,ko01000 - - - CbiC,TP_methylase LIIFOLDO_02945 435591.BDI_3048 9.67e-225 619.0 COG3637@1|root,COG3637@2|Bacteria,4NQW6@976|Bacteroidetes,2FMZI@200643|Bacteroidia,22YCX@171551|Porphyromonadaceae 976|Bacteroidetes M Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - - - - - - - - - - OMP_b-brl LIIFOLDO_02947 435591.BDI_3049 1.55e-134 380.0 2AADI@1|root,30ZPI@2|Bacteria,4PDZZ@976|Bacteroidetes,2FW3N@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function (DUF5025) - - - - - - - - - - - - DUF5025 LIIFOLDO_02948 435591.BDI_3050 1.19e-168 471.0 28P2C@1|root,32W2C@2|Bacteria,4NSN6@976|Bacteroidetes,2FSPW@200643|Bacteroidia,2318Y@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_02949 435591.BDI_3051 3.91e-91 266.0 2EGMM@1|root,33ADT@2|Bacteria,4NUZ1@976|Bacteroidetes,2FVFQ@200643|Bacteroidia,22YW2@171551|Porphyromonadaceae 976|Bacteroidetes S Bacterial PH domain - - - - - - - - - - - - bPH_4 LIIFOLDO_02950 435591.BDI_3052 0.0 868.0 COG1249@1|root,COG1249@2|Bacteria,4NDVC@976|Bacteroidetes,2FM8Y@200643|Bacteroidia,22WU2@171551|Porphyromonadaceae 976|Bacteroidetes C Dihydrolipoyl dehydrogenase lpdA - 1.8.1.4 ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00036,M00307,M00532 R00209,R01221,R01698,R03815,R07618,R08549 RC00004,RC00022,RC00583,RC02742,RC02833,RC02834 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 - - - Pyr_redox_2,Pyr_redox_dim LIIFOLDO_02951 435591.BDI_3053 3.68e-171 478.0 2CEK0@1|root,321UV@2|Bacteria,4NUC9@976|Bacteroidetes,2FQ1Y@200643|Bacteroidia,22YU9@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4271) - - - - - - - - - - - - DUF4271 LIIFOLDO_02952 435591.BDI_3054 2.31e-180 502.0 COG1587@1|root,COG1587@2|Bacteria,4NEQ3@976|Bacteroidetes,2FMX9@200643|Bacteroidia,22W2D@171551|Porphyromonadaceae 976|Bacteroidetes H Uroporphyrinogen-III synthase hemD - 4.2.1.75 ko:K01719 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R03165 RC01861 ko00000,ko00001,ko00002,ko01000 - - - HEM4 LIIFOLDO_02953 435591.BDI_3055 3.69e-84 248.0 COG0594@1|root,COG0594@2|Bacteria,4NUMM@976|Bacteroidetes,2FUKM@200643|Bacteroidia,22YNG@171551|Porphyromonadaceae 976|Bacteroidetes J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme rnpA - 3.1.26.5 ko:K03536 - - - - ko00000,ko01000,ko03016 - - - Ribonuclease_P LIIFOLDO_02954 1122931.AUAE01000007_gene1139 1.13e-48 154.0 COG0759@1|root,COG0759@2|Bacteria,4NV1N@976|Bacteroidetes,2FTU6@200643|Bacteroidia,22YS5@171551|Porphyromonadaceae 976|Bacteroidetes S Could be involved in insertion of integral membrane proteins into the membrane yidD - - ko:K08998 - - - - ko00000 - - - Haemolytic LIIFOLDO_02955 435591.BDI_3057 8.06e-163 456.0 COG0084@1|root,COG0084@2|Bacteria,4NSGW@976|Bacteroidetes,2FQ90@200643|Bacteroidia,22Y9I@171551|Porphyromonadaceae 976|Bacteroidetes L hydrolase, TatD family - - - ko:K03424 - - - - ko00000,ko01000 - - - TatD_DNase LIIFOLDO_02956 435591.BDI_3058 9.87e-307 836.0 COG0162@1|root,COG0162@2|Bacteria,4NF19@976|Bacteroidetes,2FN0B@200643|Bacteroidia,22VXJ@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) tyrS - 6.1.1.1 ko:K01866 ko00970,map00970 M00359,M00360 R02918 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 - - - S4,tRNA-synt_1b LIIFOLDO_02958 435591.BDI_3847 3.19e-30 115.0 COG1595@1|root,COG1595@2|Bacteria,4NR0P@976|Bacteroidetes,2FSFE@200643|Bacteroidia 976|Bacteroidetes K RNA polymerase sigma-70 factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 LIIFOLDO_02959 435591.BDI_2277 1.1e-61 190.0 COG1544@1|root,COG1544@2|Bacteria,4NUME@976|Bacteroidetes,2FTZJ@200643|Bacteroidia,22YG0@171551|Porphyromonadaceae 976|Bacteroidetes J Ribosomal subunit interface protein raiA - - ko:K05808 - - - - ko00000,ko03009 - - - Ribosomal_S30AE LIIFOLDO_02960 435591.BDI_2278 1.94e-217 600.0 COG4974@1|root,COG4974@2|Bacteria,4NGQW@976|Bacteroidetes,2FNFK@200643|Bacteroidia,22WRA@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the 'phage' integrase family xerC - - ko:K03733 - - - - ko00000,ko03036 - - - Phage_int_SAM_1,Phage_integrase LIIFOLDO_02961 435591.BDI_2279 5.14e-34 117.0 COG0828@1|root,COG0828@2|Bacteria,4NUPV@976|Bacteroidetes,2FUNX@200643|Bacteroidia 976|Bacteroidetes J Belongs to the bacterial ribosomal protein bS21 family rpsU - - ko:K02970 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S21 LIIFOLDO_02962 435591.BDI_2280 1.67e-251 689.0 COG0182@1|root,COG0182@2|Bacteria,4NETC@976|Bacteroidetes,2FR7K@200643|Bacteroidia,22ZA9@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) mtnA - 5.3.1.23 ko:K08963 ko00270,ko01100,map00270,map01100 M00034 R04420 RC01151 ko00000,ko00001,ko00002,ko01000 - - - IF-2B LIIFOLDO_02963 435591.BDI_2281 9.13e-203 561.0 2E042@1|root,32VSS@2|Bacteria,4NSXU@976|Bacteroidetes,2FV36@200643|Bacteroidia,22YVJ@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_02964 435591.BDI_2282 2.83e-151 425.0 COG0776@1|root,COG0776@2|Bacteria,4P6DN@976|Bacteroidetes,2FRK1@200643|Bacteroidia 976|Bacteroidetes L DNA-binding protein - - - - - - - - - - - - Bac_DNA_binding LIIFOLDO_02965 435591.BDI_2283 0.0 1180.0 COG0006@1|root,COG0006@2|Bacteria,4NI1J@976|Bacteroidetes,2FNZP@200643|Bacteroidia,22WTJ@171551|Porphyromonadaceae 976|Bacteroidetes E peptidase M24 - - 3.4.11.9 ko:K01262 - - - - ko00000,ko01000,ko01002 - - - Creatinase_N,Creatinase_N_2,Peptidase_M24,Peptidase_M24_C LIIFOLDO_02966 435591.BDI_2284 2.29e-101 295.0 COG0663@1|root,COG0663@2|Bacteria,4NG6R@976|Bacteroidetes,2FMKU@200643|Bacteroidia,22W37@171551|Porphyromonadaceae 976|Bacteroidetes S acetyltransferase dapH - - - - - - - - - - - Hexapep LIIFOLDO_02967 435591.BDI_2285 1.02e-301 821.0 COG1680@1|root,COG1680@2|Bacteria,4NEVS@976|Bacteroidetes,2FQJ2@200643|Bacteroidia,22WP5@171551|Porphyromonadaceae 976|Bacteroidetes V Beta-lactamase nylB - - - - - - - - - - - Beta-lactamase LIIFOLDO_02968 435591.BDI_2286 1.16e-292 796.0 COG3509@1|root,COG3509@2|Bacteria,4NENB@976|Bacteroidetes,2G37K@200643|Bacteroidia,22Y1C@171551|Porphyromonadaceae 976|Bacteroidetes Q Carbohydrate family 9 binding domain-like - - - - - - - - - - - - CBM9_1 LIIFOLDO_02969 435591.BDI_2287 0.0 953.0 COG3579@1|root,COG3579@2|Bacteria,4NJ3J@976|Bacteroidetes,2FMZY@200643|Bacteroidia,22WXZ@171551|Porphyromonadaceae 976|Bacteroidetes M aminopeptidase pepC - 3.4.22.40 ko:K01372 - - - - ko00000,ko01000,ko01002 - - - Peptidase_C1_2 LIIFOLDO_02970 435591.BDI_2288 1.04e-104 312.0 COG1519@1|root,COG1519@2|Bacteria,4NESA@976|Bacteroidetes,2FPNI@200643|Bacteroidia,22XA0@171551|Porphyromonadaceae 976|Bacteroidetes M transferase waaA - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 ko:K02527 ko00540,ko01100,map00540,map01100 M00060,M00080 R04658,R05074,R09763 RC00009,RC00077,RC00247 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 - GT30 - Glycos_transf_N LIIFOLDO_02971 435591.BDI_0639 6.84e-310 845.0 COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,2FMCJ@200643|Bacteroidia,22X7M@171551|Porphyromonadaceae 976|Bacteroidetes T COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains - - - ko:K07713 ko02020,map02020 M00499 - - ko00000,ko00001,ko00002,ko02022 - - - HTH_8,Response_reg,Sigma54_activat LIIFOLDO_02972 435591.BDI_0638 8.85e-288 785.0 COG2311@1|root,COG2311@2|Bacteria,4NG01@976|Bacteroidetes,2FNJU@200643|Bacteroidia,22W53@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF418) - - - ko:K07148 - - - - ko00000 - - - DUF1624,DUF418 LIIFOLDO_02973 435591.BDI_0637 0.0 1540.0 COG0642@1|root,COG0784@1|root,COG2198@1|root,COG0784@2|Bacteria,COG2198@2|Bacteria,COG2205@2|Bacteria,4NFEF@976|Bacteroidetes,2FNF0@200643|Bacteroidia,22WR8@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - HATPase_c,HisKA,Response_reg LIIFOLDO_02974 435591.BDI_0636 0.0 1126.0 COG2194@1|root,COG2194@2|Bacteria,4NHJ0@976|Bacteroidetes,2FMY6@200643|Bacteroidia,22WZA@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF1705) eptA - - - - - - - - - - - DUF1705,Sulfatase LIIFOLDO_02975 1121904.ARBP01000006_gene4054 9.97e-258 723.0 COG1115@1|root,COG1115@2|Bacteria,4NDX7@976|Bacteroidetes,47UI6@768503|Cytophagia 976|Bacteroidetes U Sodium:alanine symporter family - - - ko:K03310 - - - - ko00000 2.A.25 - - Na_Ala_symp LIIFOLDO_02976 435591.BDI_0635 1.36e-72 218.0 2EBGJ@1|root,335H5@2|Bacteria,4NX87@976|Bacteroidetes,2FTAW@200643|Bacteroidia,230Z8@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_02977 435591.BDI_0634 7.43e-262 714.0 COG2152@1|root,COG2152@2|Bacteria,4NGI7@976|Bacteroidetes,2FMV9@200643|Bacteroidia,22X75@171551|Porphyromonadaceae 976|Bacteroidetes G beta-1,4-mannooligosaccharide phosphorylase - - 2.4.1.319,2.4.1.320 ko:K18785 - - R10811,R10829 RC00049 ko00000,ko01000 - - - Glyco_hydro_130 LIIFOLDO_02978 435591.BDI_3037 8.09e-314 857.0 COG0534@1|root,COG0534@2|Bacteria,4NDUF@976|Bacteroidetes,2FMX6@200643|Bacteroidia,22WP6@171551|Porphyromonadaceae 976|Bacteroidetes V Multidrug transporter MatE - - - - - - - - - - - - MatE LIIFOLDO_02979 435591.BDI_3036 0.0 1129.0 COG0446@1|root,COG0446@2|Bacteria,4P0D3@976|Bacteroidetes,2G059@200643|Bacteroidia 976|Bacteroidetes P SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_02980 470145.BACCOP_02725 1.98e-231 670.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia,4AK5Y@815|Bacteroidaceae 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_02981 435591.BDI_3033 0.0 914.0 COG0029@1|root,COG0029@2|Bacteria,4NGUE@976|Bacteroidetes,2FNMT@200643|Bacteroidia,22WRX@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the oxidation of L-aspartate to iminoaspartate nadB - 1.4.3.16 ko:K00278 ko00250,ko00760,ko01100,map00250,map00760,map01100 M00115 R00357,R00481 RC00006,RC02566 ko00000,ko00001,ko00002,ko01000 - - - FAD_binding_2,Succ_DH_flav_C LIIFOLDO_02982 435591.BDI_3032 3.62e-131 372.0 COG1592@1|root,COG1592@2|Bacteria,4NH0J@976|Bacteroidetes,2FNC9@200643|Bacteroidia,22WSM@171551|Porphyromonadaceae 976|Bacteroidetes C Rubrerythrin rbr GO:0003674,GO:0005488,GO:0005506,GO:0006950,GO:0006979,GO:0008150,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0050896 - - - - - - - - - - Rubrerythrin LIIFOLDO_02983 435591.BDI_3031 0.0 1044.0 COG0659@1|root,COG0659@2|Bacteria,4NF1C@976|Bacteroidetes,2FPEW@200643|Bacteroidia,22WP7@171551|Porphyromonadaceae 976|Bacteroidetes P Sulfate permease sulP - - ko:K03321 - - - - ko00000,ko02000 2.A.53.3 - - STAS,Sulfate_transp LIIFOLDO_02984 435591.BDI_3030 0.0 983.0 COG1409@1|root,COG1409@2|Bacteria,4NI10@976|Bacteroidetes,2G2NH@200643|Bacteroidia,22X42@171551|Porphyromonadaceae 976|Bacteroidetes S PA14 - - - - - - - - - - - - Metallophos,PA14 LIIFOLDO_02986 435591.BDI_0494 0.0 1878.0 COG1629@1|root,COG4206@1|root,COG1629@2|Bacteria,COG4206@2|Bacteria,4NDXS@976|Bacteroidetes,2FM37@200643|Bacteroidia,22W2S@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent Receptor Plug Domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec LIIFOLDO_02987 435591.BDI_0493 0.0 905.0 COG0446@1|root,COG0446@2|Bacteria,4P1DZ@976|Bacteroidetes,2G0CQ@200643|Bacteroidia 976|Bacteroidetes S Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_02988 435591.BDI_0492 0.0 964.0 COG1119@1|root,COG1119@2|Bacteria,4NEWY@976|Bacteroidetes,2FMN3@200643|Bacteroidia,22X6F@171551|Porphyromonadaceae 976|Bacteroidetes P ATPases associated with a variety of cellular activities modF - - ko:K05776 ko02010,map02010 M00189 - - ko00000,ko00001,ko00002,ko02000 - - - ABC_tran LIIFOLDO_02989 435591.BDI_0491 0.0 986.0 COG4198@1|root,COG4198@2|Bacteria,4NEQC@976|Bacteroidetes,2FPUQ@200643|Bacteroidia,22WPB@171551|Porphyromonadaceae 976|Bacteroidetes S Susd and RagB outer membrane lipoprotein - - - - - - - - - - - - SusD-like,SusD-like_2 LIIFOLDO_02990 435591.BDI_0490 0.0 2159.0 COG1629@1|root,COG4206@1|root,COG4206@2|Bacteria,COG4771@2|Bacteria,4NDU8@976|Bacteroidetes,2FMRZ@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_02991 435591.BDI_0553 1.98e-105 307.0 COG0776@1|root,COG0776@2|Bacteria 2|Bacteria L regulation of translation - - - - - - - - - - - - Bac_DNA_binding LIIFOLDO_02992 1235803.C825_04231 1.18e-28 103.0 28ZY9@1|root,2ZMNR@2|Bacteria,4P7N8@976|Bacteroidetes,2FUPD@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function (DUF4248) - - - - - - - - - - - - DUF4248 LIIFOLDO_02993 435591.BDI_0554 0.0 1194.0 COG0358@1|root,COG5545@1|root,COG0358@2|Bacteria,COG5545@2|Bacteria,4NETK@976|Bacteroidetes,2FRDX@200643|Bacteroidia 976|Bacteroidetes L Primase C terminal 2 (PriCT-2) - - - - - - - - - - - - DUF3987,PriCT_2,VirE_N LIIFOLDO_02994 435591.BDI_0555 1.8e-134 380.0 2F1VS@1|root,33UVK@2|Bacteria,4PMFX@976|Bacteroidetes,2FPZ8@200643|Bacteroidia 976|Bacteroidetes S VirE N-terminal domain - - - - - - - - - - - - VirE_N LIIFOLDO_02995 435591.BDI_0556 2.27e-114 328.0 2DUR1@1|root,33RU4@2|Bacteria,4P0MW@976|Bacteroidetes,2FX4N@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_02996 880074.BARVI_01635 7.86e-128 390.0 COG2244@1|root,COG2244@2|Bacteria,4NEGZ@976|Bacteroidetes,2FNUG@200643|Bacteroidia,22WG6@171551|Porphyromonadaceae 976|Bacteroidetes S Polysaccharide biosynthesis protein - - - - - - - - - - - - MatE,Polysacc_synt LIIFOLDO_02997 78344.BIGA_0883 2.16e-43 162.0 COG2327@1|root,COG2327@2|Bacteria,2IC1G@201174|Actinobacteria,4D09D@85004|Bifidobacteriales 201174|Actinobacteria S Polysaccharide pyruvyl transferase - - - - - - - - - - - - PS_pyruv_trans LIIFOLDO_02998 1280668.ATVT01000008_gene588 1.28e-82 264.0 COG1035@1|root,COG1035@2|Bacteria,1TQGA@1239|Firmicutes,249BE@186801|Clostridia,4BZCS@830|Butyrivibrio 186801|Clostridia C Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus - - - - - - - - - - - - Fer4,Fer4_7,FrhB_FdhB_C,FrhB_FdhB_N LIIFOLDO_03000 1211813.CAPH01000013_gene660 1.24e-45 153.0 COG1045@1|root,COG1045@2|Bacteria,4NMY9@976|Bacteroidetes,2FUD4@200643|Bacteroidia 976|Bacteroidetes E Bacterial transferase hexapeptide (six repeats) - - 2.3.1.30 ko:K00640 ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111 M00021 R00586 RC00004,RC00041 ko00000,ko00001,ko00002,ko01000 - - - Hexapep LIIFOLDO_03001 1121101.HMPREF1532_02916 1.01e-230 640.0 COG0381@1|root,COG0381@2|Bacteria,4NGBD@976|Bacteroidetes,2FM5D@200643|Bacteroidia,4AKDE@815|Bacteroidaceae 976|Bacteroidetes G UDP-N-acetylglucosamine 2-epimerase - - 5.1.3.14 ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 M00362 R00420 RC00290 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Epimerase_2 LIIFOLDO_03002 457415.HMPREF1006_01123 7.73e-86 263.0 COG3774@1|root,COG3774@2|Bacteria,3TC70@508458|Synergistetes 508458|Synergistetes M Glycosyltransferase sugar-binding region containing DXD motif - - - - - - - - - - - - Gly_transf_sug LIIFOLDO_03003 435591.BDI_3001 0.0 865.0 COG0270@1|root,COG0270@2|Bacteria,4NG9I@976|Bacteroidetes,2FPCW@200643|Bacteroidia,22ZFX@171551|Porphyromonadaceae 976|Bacteroidetes H C-5 cytosine-specific DNA methylase - - 2.1.1.37 ko:K00558 ko00270,ko01100,ko05206,map00270,map01100,map05206 M00035 R04858 RC00003,RC00332 ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036 - - - DNA_methylase LIIFOLDO_03004 435591.BDI_3000 1.35e-283 774.0 28MJP@1|root,2ZAW3@2|Bacteria,4NKRQ@976|Bacteroidetes,2FV8P@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_03005 435591.BDI_2999 1.24e-153 431.0 COG0176@1|root,COG0176@2|Bacteria,4NFVZ@976|Bacteroidetes,2FNM3@200643|Bacteroidia,22X0U@171551|Porphyromonadaceae 976|Bacteroidetes F Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway tal - 2.2.1.2 ko:K00616,ko:K08314 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007 R01827 RC00439,RC00604 ko00000,ko00001,ko00002,ko01000 - - - TAL_FSA LIIFOLDO_03006 435591.BDI_2998 0.0 1692.0 COG0249@1|root,COG0249@2|Bacteria,4NEGB@976|Bacteroidetes,2FMFA@200643|Bacteroidia,22WUH@171551|Porphyromonadaceae 976|Bacteroidetes L that it carries out the mismatch recognition step. This protein has a weak ATPase activity mutS GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - ko:K03555 ko03430,map03430 - - - ko00000,ko00001,ko03400 - - - MutS_I,MutS_II,MutS_III,MutS_IV,MutS_V LIIFOLDO_03007 435591.BDI_2997 2.08e-285 779.0 COG3391@1|root,COG3391@2|Bacteria,4P1PM@976|Bacteroidetes,2FP6F@200643|Bacteroidia,230NH@171551|Porphyromonadaceae 976|Bacteroidetes S 6-bladed beta-propeller - - - - - - - - - - - - DUF5128 LIIFOLDO_03008 435591.BDI_2996 7.04e-100 290.0 2E9E6@1|root,333MR@2|Bacteria,4NVIJ@976|Bacteroidetes,2FQN2@200643|Bacteroidia,22YN8@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4252) - - - - - - - - - - - - DUF4252 LIIFOLDO_03009 435591.BDI_2995 1.68e-81 242.0 2BVQD@1|root,332WQ@2|Bacteria,4NXE1@976|Bacteroidetes,2FQSK@200643|Bacteroidia,22YY8@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_03010 435591.BDI_2994 3.31e-114 328.0 COG1595@1|root,COG1595@2|Bacteria,4NREV@976|Bacteroidetes,2FNCE@200643|Bacteroidia,22YBZ@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 LIIFOLDO_03011 435591.BDI_2993 7.69e-97 285.0 2EU1G@1|root,33MIH@2|Bacteria,4NZ7F@976|Bacteroidetes,2FUUZ@200643|Bacteroidia,22YW5@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4252) - - - - - - - - - - - - DUF4252 LIIFOLDO_03012 435591.BDI_2992 6.22e-216 597.0 2DKZS@1|root,311B0@2|Bacteria,4PMY9@976|Bacteroidetes 976|Bacteroidetes S Fimbrillin-like - - - - - - - - - - - - Mfa_like_1 LIIFOLDO_03014 435591.BDI_3848 2.49e-156 439.0 COG0546@1|root,COG0546@2|Bacteria,4NMPP@976|Bacteroidetes,2FS95@200643|Bacteroidia,22XY9@171551|Porphyromonadaceae 976|Bacteroidetes S HAD-hyrolase-like - - 3.1.3.18 ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 - R01334 RC00017 ko00000,ko00001,ko01000 - - - HAD_2 LIIFOLDO_03015 435591.BDI_3847 7.09e-132 375.0 COG1595@1|root,COG1595@2|Bacteria,4NR0P@976|Bacteroidetes,2FSFE@200643|Bacteroidia 976|Bacteroidetes K RNA polymerase sigma-70 factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 LIIFOLDO_03017 435591.BDI_3845 0.0 1119.0 COG1262@1|root,COG3005@1|root,COG1262@2|Bacteria,COG3005@2|Bacteria,4NEUZ@976|Bacteroidetes,2FQ5J@200643|Bacteroidia,22X2D@171551|Porphyromonadaceae 976|Bacteroidetes C NapC/NirT cytochrome c family, N-terminal region - - - - - - - - - - - - Cytochrom_NNT,FGE-sulfatase LIIFOLDO_03018 435591.BDI_3844 0.0 936.0 COG0673@1|root,COG0673@2|Bacteria,4NF9M@976|Bacteroidetes,2FMQW@200643|Bacteroidia,22XJJ@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA,TAT_signal LIIFOLDO_03019 435591.BDI_3843 2.59e-227 625.0 COG1082@1|root,COG1082@2|Bacteria,4NHGW@976|Bacteroidetes,2FNTZ@200643|Bacteroidia,22X97@171551|Porphyromonadaceae 976|Bacteroidetes G Xylose isomerase-like TIM barrel - - - - - - - - - - - - AP_endonuc_2,TAT_signal LIIFOLDO_03020 435591.BDI_3842 3.29e-163 456.0 COG2846@1|root,COG2846@2|Bacteria,4NN29@976|Bacteroidetes,2FS5Z@200643|Bacteroidia,22XST@171551|Porphyromonadaceae 976|Bacteroidetes K Di-iron-containing protein involved in the repair of iron-sulfur clusters - - - ko:K07322 - - - - ko00000 - - - GerE LIIFOLDO_03021 435591.BDI_3841 5.96e-126 359.0 COG2197@1|root,COG2197@2|Bacteria,4NSJ3@976|Bacteroidetes,2G2UZ@200643|Bacteroidia,22YE2@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix, Lux Regulon - - - - - - - - - - - - GerE,PAS_3 LIIFOLDO_03022 435591.BDI_3840 0.0 1538.0 COG1629@1|root,COG4771@2|Bacteria,4PKE0@976|Bacteroidetes,2G3DW@200643|Bacteroidia,22VYA@171551|Porphyromonadaceae 976|Bacteroidetes P Psort location OuterMembrane, score 10.00 - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_03023 483215.BACFIN_08653 2.62e-20 90.9 COG5464@1|root,COG5464@2|Bacteria,4NHVS@976|Bacteroidetes,2G317@200643|Bacteroidia,4APIU@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - PDDEXK_2 LIIFOLDO_03024 435591.BDI_1519 0.0 1090.0 COG0205@1|root,COG0205@2|Bacteria,4NIKT@976|Bacteroidetes,2FNYX@200643|Bacteroidia,22X32@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions pfp - 2.7.1.11,2.7.1.90 ko:K00895,ko:K21071 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130 - R00756,R00764,R02073,R03236,R04779 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PFK LIIFOLDO_03026 435591.BDI_1520 0.0 3090.0 COG0286@1|root,COG4889@1|root,COG0286@2|Bacteria,COG4889@2|Bacteria,4NH2U@976|Bacteroidetes,2FQ18@200643|Bacteroidia 976|Bacteroidetes L Helicase C-terminal domain protein - - - - - - - - - - - - Helicase_C,Mrr_cat_2,N6_Mtase,ResIII LIIFOLDO_03027 435591.BDI_1521 2.32e-259 712.0 COG0526@1|root,COG0526@2|Bacteria,4NEX3@976|Bacteroidetes,2FN8N@200643|Bacteroidia,22XR2@171551|Porphyromonadaceae 976|Bacteroidetes CO PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - - - - - - - - - - AhpC-TSA,DUF4369,Thioredoxin_8 LIIFOLDO_03028 435591.BDI_1522 2.98e-104 301.0 COG1765@1|root,COG1765@2|Bacteria,4NNTY@976|Bacteroidetes,2FU46@200643|Bacteroidia,22YSM@171551|Porphyromonadaceae 976|Bacteroidetes O OsmC-like protein - - - ko:K07397 - - - - ko00000 - - - OsmC LIIFOLDO_03029 435591.BDI_1523 2.93e-167 467.0 COG0822@1|root,COG0822@2|Bacteria,4NJ26@976|Bacteroidetes,2FNEH@200643|Bacteroidia,22XK3@171551|Porphyromonadaceae 976|Bacteroidetes C COG0822 NifU homolog involved in Fe-S cluster formation - - - - - - - - - - - - NifU_N LIIFOLDO_03030 411477.PARMER_03873 3.2e-37 125.0 2C3XY@1|root,2ZF4X@2|Bacteria,4P7U7@976|Bacteroidetes,2FZ9B@200643|Bacteroidia,2319Y@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_03031 435591.BDI_3023 6e-268 733.0 COG4299@1|root,COG4299@2|Bacteria,4NDZF@976|Bacteroidetes,2FMH5@200643|Bacteroidia,22X85@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - DUF1624,DUF5009 LIIFOLDO_03032 435591.BDI_3021 0.0 2497.0 COG3250@1|root,COG3250@2|Bacteria,4NE7H@976|Bacteroidetes,2FNT8@200643|Bacteroidia,22WE2@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the glycosyl hydrolase 2 family - - - - - - - - - - - - F5_F8_type_C,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N LIIFOLDO_03033 435591.BDI_3020 2.21e-181 505.0 COG0731@1|root,COG0731@2|Bacteria,4NJEM@976|Bacteroidetes,2FMWY@200643|Bacteroidia,22WAC@171551|Porphyromonadaceae 976|Bacteroidetes C radical SAM domain protein - - - - - - - - - - - - Fer4_14,Radical_SAM LIIFOLDO_03034 435591.BDI_3019 0.0 1352.0 COG1555@1|root,COG1555@2|Bacteria,4NE88@976|Bacteroidetes,2FP15@200643|Bacteroidia,22X8S@171551|Porphyromonadaceae 976|Bacteroidetes L Psort location OuterMembrane, score - - - - - - - - - - - - HHH_3 LIIFOLDO_03035 1235803.C825_01377 1.27e-37 127.0 2E3BY@1|root,32YBB@2|Bacteria,4NVYN@976|Bacteroidetes,2FUJP@200643|Bacteroidia,22YMH@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4492) - - - - - - - - - - - - DUF4492 LIIFOLDO_03036 435591.BDI_2648 0.0 1029.0 COG1271@1|root,COG1271@2|Bacteria,4NG7U@976|Bacteroidetes,2FMV6@200643|Bacteroidia,22W3V@171551|Porphyromonadaceae 976|Bacteroidetes C oxidase, subunit cydA - 1.10.3.14 ko:K00425 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00153 R11325 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.4.3 - - Cyt_bd_oxida_I LIIFOLDO_03037 435591.BDI_2649 2.3e-275 753.0 COG1294@1|root,COG1294@2|Bacteria,4NHZU@976|Bacteroidetes,2FMIN@200643|Bacteroidia,22W6V@171551|Porphyromonadaceae 976|Bacteroidetes C Cytochrome C oxidase assembly protein cydB - 1.10.3.14 ko:K00426 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00153 R11325 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.4.3 - - Cyt_bd_oxida_II LIIFOLDO_03038 435591.BDI_2650 0.0 1075.0 COG2234@1|root,COG2234@2|Bacteria,4NFDJ@976|Bacteroidetes,2FNKJ@200643|Bacteroidia 976|Bacteroidetes S Peptidase family M28 - - - - - - - - - - - - PA,Peptidase_M28 LIIFOLDO_03039 435591.BDI_2651 1.28e-223 615.0 COG1234@1|root,COG1234@2|Bacteria,4NE1K@976|Bacteroidetes,2FM13@200643|Bacteroidia,22WDF@171551|Porphyromonadaceae 976|Bacteroidetes S Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA rnz - 3.1.26.11 ko:K00784 ko03013,map03013 - - - ko00000,ko00001,ko01000,ko03016 - - - Lactamase_B_2 LIIFOLDO_03040 1235803.C825_01381 1.1e-29 109.0 2ERVA@1|root,33JEG@2|Bacteria,4NYF4@976|Bacteroidetes,2FTR2@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_03041 435591.BDI_2653 0.0 2132.0 2DUTV@1|root,33S7W@2|Bacteria,4P1VI@976|Bacteroidetes,2FWJJ@200643|Bacteroidia,22ZT0@171551|Porphyromonadaceae 435591.BDI_2653|- - - - - - - - - - - - - - - - LIIFOLDO_03042 435591.BDI_3567 4.81e-296 806.0 COG0426@1|root,COG0426@2|Bacteria,4NGI2@976|Bacteroidetes,2FMWU@200643|Bacteroidia,22W6S@171551|Porphyromonadaceae 976|Bacteroidetes C Metallo-beta-lactamase domain protein fprA - 1.6.3.4 ko:K22405 - - - - ko00000,ko01000 - - - Flavodoxin_1,Flavodoxin_5,Lactamase_B,Lactamase_B_2 LIIFOLDO_03043 435591.BDI_3568 2.52e-197 546.0 COG0363@1|root,COG0363@2|Bacteria,4NHF8@976|Bacteroidetes,2FN1D@200643|Bacteroidia,22W1C@171551|Porphyromonadaceae 976|Bacteroidetes G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion nagB GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 3.5.99.6 ko:K02564 ko00520,ko01100,map00520,map01100 - R00765 RC00163 ko00000,ko00001,ko01000 - - - Glucosamine_iso LIIFOLDO_03044 435591.BDI_3569 0.0 1622.0 COG1506@1|root,COG1506@2|Bacteria,4NE60@976|Bacteroidetes,2FP4V@200643|Bacteroidia,22XCA@171551|Porphyromonadaceae 976|Bacteroidetes E Prolyl oligopeptidase family - - - - - - - - - - - - Peptidase_S9 LIIFOLDO_03045 435591.BDI_3570 0.0 1023.0 COG1834@1|root,COG1834@2|Bacteria,4NFQ7@976|Bacteroidetes,2FP1A@200643|Bacteroidia 976|Bacteroidetes E SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_03046 435591.BDI_3571 0.0 2110.0 COG1629@1|root,COG4206@1|root,COG1629@2|Bacteria,COG4206@2|Bacteria,4NDXS@976|Bacteroidetes,2FM37@200643|Bacteroidia,22WEP@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent Receptor Plug Domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_03048 435591.BDI_3108 2.36e-125 357.0 COG1595@1|root,COG1595@2|Bacteria,4NV8H@976|Bacteroidetes,2FTEK@200643|Bacteroidia 976|Bacteroidetes K RNA polymerase - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 LIIFOLDO_03049 435591.BDI_3109 6.71e-241 662.0 COG3712@1|root,COG3712@2|Bacteria,4NNTM@976|Bacteroidetes,2FQW4@200643|Bacteroidia,22Y0G@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR LIIFOLDO_03050 435591.BDI_3110 0.0 2417.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia,22WTZ@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg,Plug,STN,TonB_dep_Rec LIIFOLDO_03051 435591.BDI_3111 0.0 1200.0 COG0457@1|root,COG0457@2|Bacteria,4NDX0@976|Bacteroidetes,2FM6J@200643|Bacteroidia,22X0J@171551|Porphyromonadaceae 976|Bacteroidetes S SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_03052 435591.BDI_3112 7.6e-213 586.0 COG3568@1|root,COG3568@2|Bacteria,4NHXV@976|Bacteroidetes,2FNR3@200643|Bacteroidia 976|Bacteroidetes S Endonuclease exonuclease phosphatase family - - - - - - - - - - - - Exo_endo_phos LIIFOLDO_03053 435591.BDI_3113 2.8e-227 625.0 COG3568@1|root,COG3568@2|Bacteria,4NHXV@976|Bacteroidetes,2FNR3@200643|Bacteroidia,22W59@171551|Porphyromonadaceae 976|Bacteroidetes S Endonuclease/Exonuclease/phosphatase family - - - - - - - - - - - - Exo_endo_phos LIIFOLDO_03054 435591.BDI_1821 6.29e-221 609.0 COG0526@1|root,COG0526@2|Bacteria,4NKU0@976|Bacteroidetes,2FPZT@200643|Bacteroidia,22XPB@171551|Porphyromonadaceae 976|Bacteroidetes CO Domain of unknown function (DUF5106) - - - - - - - - - - - - AhpC-TSA,DUF5106,Thioredoxin_8 LIIFOLDO_03055 435591.BDI_1822 4.1e-180 502.0 COG0501@1|root,COG0501@2|Bacteria,4NHYD@976|Bacteroidetes,2FPZ9@200643|Bacteroidia,22WAG@171551|Porphyromonadaceae 976|Bacteroidetes O Peptidase family M48 loiP - - ko:K07387 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M48 LIIFOLDO_03056 435591.BDI_1823 3.93e-138 391.0 COG0642@1|root,COG2205@2|Bacteria,4NKBC@976|Bacteroidetes,2FNE0@200643|Bacteroidia,22WMG@171551|Porphyromonadaceae 435591.BDI_1823|- T Histidine kinase-like ATPases - - - - - - - - - - - - - LIIFOLDO_03057 435591.BDI_1824 2.69e-141 400.0 COG1259@1|root,COG1259@2|Bacteria,4NGSW@976|Bacteroidetes,2FTKZ@200643|Bacteroidia,22XUY@171551|Porphyromonadaceae 976|Bacteroidetes S Bifunctional nuclease - - - ko:K08999 - - - - ko00000 - - - DNase-RNase,UVR LIIFOLDO_03058 435591.BDI_1825 1.66e-305 834.0 COG1972@1|root,COG1972@2|Bacteria,4NEYN@976|Bacteroidetes,2FNQH@200643|Bacteroidia,22W9V@171551|Porphyromonadaceae 976|Bacteroidetes F Na+ dependent nucleoside transporter C-terminus nupC - - ko:K03317 - - - - ko00000 2.A.41 - - Gate,Nucleos_tra2_C,Nucleos_tra2_N LIIFOLDO_03059 435591.BDI_1826 3.17e-172 479.0 COG1385@1|root,COG1385@2|Bacteria,4NE2S@976|Bacteroidetes,2FKZG@200643|Bacteroidia,22WYD@171551|Porphyromonadaceae 976|Bacteroidetes J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit rsmE - 2.1.1.193 ko:K09761 - - - - ko00000,ko01000,ko03009 - - - Methyltrans_RNA LIIFOLDO_03060 435591.BDI_1827 2.83e-186 516.0 COG2133@1|root,COG2133@2|Bacteria,4PKJE@976|Bacteroidetes,2FX58@200643|Bacteroidia,231GZ@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080 LIIFOLDO_03061 435591.BDI_1828 0.0 868.0 COG0519@1|root,COG0519@2|Bacteria,4NZSX@976|Bacteroidetes,2FNJE@200643|Bacteroidia,22ZKW@171551|Porphyromonadaceae 976|Bacteroidetes F GMP synthase C terminal domain - GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 M00050 R01230,R01231,R08244 RC00010,RC00204 ko00000,ko00001,ko00002,ko01000,ko01002 - - - GATase,GMP_synt_C,NAD_synthase LIIFOLDO_03062 435591.BDI_1829 0.0 1030.0 COG0518@1|root,COG0519@1|root,COG0518@2|Bacteria,COG0519@2|Bacteria,4NESX@976|Bacteroidetes,2FM3V@200643|Bacteroidia,22VWG@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the synthesis of GMP from XMP guaA - 6.3.5.2 ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 M00050 R01230,R01231,R08244 RC00010,RC00204 ko00000,ko00001,ko00002,ko01000,ko01002 - - - GATase,GMP_synt_C,NAD_synthase LIIFOLDO_03064 435591.BDI_1392 2.82e-186 517.0 COG1013@1|root,COG1013@2|Bacteria,4NDWF@976|Bacteroidetes,2FP3C@200643|Bacteroidia,22VXD@171551|Porphyromonadaceae 976|Bacteroidetes C Oxidoreductase vorA - 1.2.7.11,1.2.7.3 ko:K00175 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00009,M00011,M00173,M00620 R01196,R01197 RC00004,RC02742,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - TPP_enzyme_C LIIFOLDO_03065 435591.BDI_1393 1.75e-123 352.0 COG1014@1|root,COG1014@2|Bacteria,4NGWJ@976|Bacteroidetes,2FNG6@200643|Bacteroidia,22X34@171551|Porphyromonadaceae 976|Bacteroidetes C 2-oxoglutarate ferredoxin oxidoreductase subunit gamma porG - 1.2.7.3 ko:K00177 ko00020,ko00720,ko01100,ko01120,ko01200,map00020,map00720,map01100,map01120,map01200 M00009,M00011,M00173,M00620 R01197 RC00004,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - POR LIIFOLDO_03066 435591.BDI_1394 0.0 1361.0 COG4206@1|root,COG4206@2|Bacteria,4NI2R@976|Bacteroidetes,2FNYT@200643|Bacteroidia,22W3I@171551|Porphyromonadaceae 976|Bacteroidetes H Putative porin - - - - - - - - - - - - Porin_10 LIIFOLDO_03067 435591.BDI_1395 3.16e-193 536.0 COG4623@1|root,COG4623@2|Bacteria,4PKED@976|Bacteroidetes,2G3EB@200643|Bacteroidia,22WXG@171551|Porphyromonadaceae 976|Bacteroidetes M Bacterial extracellular solute-binding proteins, family 3 - - - - - - - - - - - - SBP_bac_3 LIIFOLDO_03068 435591.BDI_1396 0.0 1215.0 COG0642@1|root,COG2205@2|Bacteria,4P0BP@976|Bacteroidetes 976|Bacteroidetes T PAS fold - - - - - - - - - - - - HATPase_c,HisKA,PAS_4 LIIFOLDO_03069 435591.BDI_1397 2.96e-301 824.0 COG0513@1|root,COG0513@2|Bacteria,4NEVI@976|Bacteroidetes,2FM7Y@200643|Bacteroidia,22WEV@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the DEAD box helicase family - - - - - - - - - - - - DEAD,Helicase_C LIIFOLDO_03070 435591.BDI_1398 0.0 1120.0 COG1158@1|root,COG1158@2|Bacteria,4NEFP@976|Bacteroidetes,2FN7R@200643|Bacteroidia,22X21@171551|Porphyromonadaceae 976|Bacteroidetes K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template rho - - ko:K03628 ko03018,map03018 - - - ko00000,ko00001,ko03019,ko03021 - - - ATP-synt_ab,Rho_N,Rho_RNA_bind LIIFOLDO_03071 435591.BDI_1512 2.69e-55 179.0 COG0776@1|root,COG0776@2|Bacteria,4P3B0@976|Bacteroidetes,2FQZF@200643|Bacteroidia 976|Bacteroidetes L regulation of translation - - - - - - - - - - - - - LIIFOLDO_03072 435591.BDI_1513 5.79e-117 334.0 COG1705@1|root,COG1705@2|Bacteria,4NR3X@976|Bacteroidetes,2FY2U@200643|Bacteroidia 976|Bacteroidetes NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase - - - ko:K02395 - - - - ko00000,ko02035 - - - Glucosaminidase LIIFOLDO_03074 435591.BDI_1516 0.0 1197.0 COG0561@1|root,COG0561@2|Bacteria,4PKHD@976|Bacteroidetes,2G0K6@200643|Bacteroidia 976|Bacteroidetes S Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_03075 435591.BDI_1517 0.0 2230.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia,22XE6@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_03076 435591.BDI_1518 0.0 1573.0 COG1874@1|root,COG3439@1|root,COG1874@2|Bacteria,COG3439@2|Bacteria,4NE2P@976|Bacteroidetes,2FN5P@200643|Bacteroidia,22WQT@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 35 bga - 3.2.1.23 ko:K12308 ko00052,map00052 - R01105 RC00452 ko00000,ko00001,ko01000 - - - Glyco_hydro_35 LIIFOLDO_03077 435591.BDI_1547 4.19e-87 256.0 COG0848@1|root,COG0848@2|Bacteria,4NNI6@976|Bacteroidetes,2FRY4@200643|Bacteroidia,22Y92@171551|Porphyromonadaceae 976|Bacteroidetes U Biopolymer transporter ExbD - - - ko:K03559 - - - - ko00000,ko02000 1.A.30.2.1 - - ExbD LIIFOLDO_03078 435591.BDI_1546 1.32e-157 443.0 COG0811@1|root,COG0811@2|Bacteria,4NFIX@976|Bacteroidetes,2FNG0@200643|Bacteroidia,22WUN@171551|Porphyromonadaceae 976|Bacteroidetes U Transporter, MotA TolQ ExbB proton channel family protein exbB - - ko:K03561 - - - - ko00000,ko02000 1.A.30.2.1 - - MotA_ExbB LIIFOLDO_03079 435591.BDI_1545 1.83e-174 486.0 COG0854@1|root,COG0854@2|Bacteria,4NF4Z@976|Bacteroidetes,2FM21@200643|Bacteroidia,22WZG@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate pdxJ GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 ko:K03474 ko00750,ko01100,map00750,map01100 M00124 R05838 RC01476 ko00000,ko00001,ko00002,ko01000 - - - PdxJ LIIFOLDO_03080 435591.BDI_1544 4.48e-152 427.0 COG0517@1|root,COG0517@2|Bacteria,4NF8G@976|Bacteroidetes,2FT2B@200643|Bacteroidia,22YSH@171551|Porphyromonadaceae 976|Bacteroidetes S CBS domain - - - - - - - - - - - - CBS LIIFOLDO_03081 435591.BDI_1543 9.15e-206 569.0 COG0061@1|root,COG0061@2|Bacteria,4NFG5@976|Bacteroidetes,2FMTM@200643|Bacteroidia,22W2Y@171551|Porphyromonadaceae 976|Bacteroidetes H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP nadK - 2.7.1.23 ko:K00858 ko00760,ko01100,map00760,map01100 - R00104 RC00002,RC00078 ko00000,ko00001,ko01000 - - - NAD_kinase LIIFOLDO_03082 435591.BDI_1542 2.22e-234 645.0 COG1216@1|root,COG1216@2|Bacteria,4NFS6@976|Bacteroidetes,2FNNV@200643|Bacteroidia,22W6N@171551|Porphyromonadaceae 976|Bacteroidetes M glycosyl transferase family 2 - - - - - - - - - - - - Glyco_trans_2_3,Glycos_transf_2 LIIFOLDO_03083 484018.BACPLE_02007 1.46e-09 65.5 COG0457@1|root,COG0457@2|Bacteria,4NRRJ@976|Bacteroidetes,2FPTP@200643|Bacteroidia,4ANMB@815|Bacteroidaceae 976|Bacteroidetes S Tetratricopeptide repeat protein - - - - - - - - - - - - TPR_8 LIIFOLDO_03085 435591.BDI_1540 1.6e-216 597.0 COG2207@1|root,COG2207@2|Bacteria,4NMRA@976|Bacteroidetes,2FMKM@200643|Bacteroidia 976|Bacteroidetes K transcriptional regulator (AraC family) thiD - 2.7.1.49,2.7.4.7 ko:K00941 ko00730,ko01100,map00730,map01100 M00127 R03471,R04509 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - AraC_binding,HTH_18,Phos_pyr_kin LIIFOLDO_03086 435591.BDI_1539 0.0 1018.0 COG0642@1|root,COG2205@2|Bacteria,4NDXU@976|Bacteroidetes,2FNIT@200643|Bacteroidia,22WZF@171551|Porphyromonadaceae 976|Bacteroidetes T PAS domain - - - - - - - - - - - - HATPase_c,HisKA,PAS_3,Response_reg LIIFOLDO_03087 435591.BDI_0110 6.8e-184 517.0 COG1333@1|root,COG1333@2|Bacteria,4NGT1@976|Bacteroidetes,2FQQR@200643|Bacteroidia,22WM7@171551|Porphyromonadaceae 976|Bacteroidetes O ResB-like family ccs1 - - - - - - - - - - - ResB LIIFOLDO_03088 435591.BDI_0111 2.52e-194 538.0 COG0755@1|root,COG0755@2|Bacteria,4NIJZ@976|Bacteroidetes,2FM69@200643|Bacteroidia,22XDR@171551|Porphyromonadaceae 976|Bacteroidetes O Cytochrome C assembly protein ycf - - - - - - - - - - - Cytochrom_C_asm LIIFOLDO_03089 435591.BDI_0112 0.0 880.0 COG3203@1|root,COG3203@2|Bacteria,4NDYW@976|Bacteroidetes,2FMQD@200643|Bacteroidia,22VVV@171551|Porphyromonadaceae 976|Bacteroidetes M Alginate export - - - - - - - - - - - - Alginate_exp LIIFOLDO_03090 435591.BDI_0113 6.9e-157 440.0 COG0664@1|root,COG0664@2|Bacteria,4P2X9@976|Bacteroidetes,2FPDZ@200643|Bacteroidia,230GF@171551|Porphyromonadaceae 976|Bacteroidetes K Cyclic nucleotide-monophosphate binding domain - - - - - - - - - - - - HTH_Crp_2,cNMP_binding LIIFOLDO_03091 435591.BDI_0114 5.25e-313 853.0 COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,2FMPG@200643|Bacteroidia,22W7G@171551|Porphyromonadaceae 976|Bacteroidetes T COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains - - - ko:K02481 - - - - ko00000,ko02022 - - - HTH_8,Response_reg,Sigma54_activat LIIFOLDO_03092 435591.BDI_0115 0.0 1080.0 COG5002@1|root,COG5002@2|Bacteria,4NDTV@976|Bacteroidetes,2FP04@200643|Bacteroidia,22W6T@171551|Porphyromonadaceae 976|Bacteroidetes T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain covS - - - - - - - - - - - 4HB_MCP_1,HAMP,HATPase_c,HisKA,PAS LIIFOLDO_03093 435591.BDI_0116 1.44e-159 451.0 COG3595@1|root,COG3595@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - DUF2807 LIIFOLDO_03095 435591.BDI_0117 1.19e-88 261.0 COG1970@1|root,COG1970@2|Bacteria,4NQ49@976|Bacteroidetes,2FT2E@200643|Bacteroidia,22Y4Y@171551|Porphyromonadaceae 976|Bacteroidetes M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell mscL GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - ko:K03282 - - - - ko00000,ko02000 1.A.22.1 - - MscL LIIFOLDO_03096 435591.BDI_0118 4.85e-130 369.0 COG3040@1|root,COG3040@2|Bacteria,4NNFA@976|Bacteroidetes,2FSTW@200643|Bacteroidia,22Y3T@171551|Porphyromonadaceae 976|Bacteroidetes M Lipocalin-like domain blc - - ko:K03098 - - - - ko00000,ko04147 - - - Lipocalin_2 LIIFOLDO_03097 435591.BDI_1560 1.14e-277 758.0 2BHWK@1|root,32C0K@2|Bacteria,4PJDW@976|Bacteroidetes,2G270@200643|Bacteroidia,230KX@171551|Porphyromonadaceae 976|Bacteroidetes S Outer membrane protein SusF_SusE - - - ko:K21571 - - - - ko00000 - - - SusE,SusF_SusE LIIFOLDO_03098 435591.BDI_1559 0.0 1044.0 COG3637@1|root,COG3637@2|Bacteria,4NEA6@976|Bacteroidetes,2FNRM@200643|Bacteroidia,22WNF@171551|Porphyromonadaceae 976|Bacteroidetes M SusD family susD GO:0001871,GO:0003674,GO:0005488,GO:0005509,GO:0005515,GO:0005575,GO:0005975,GO:0005976,GO:0005982,GO:0006073,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0019867,GO:0030246,GO:0030247,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0046872,GO:0071704,GO:2001070 - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB LIIFOLDO_03099 435591.BDI_1558 0.0 1983.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FP9Q@200643|Bacteroidia,22W91@171551|Porphyromonadaceae 976|Bacteroidetes P CarboxypepD_reg-like domain susC - - ko:K21573 - - - - ko00000,ko02000 1.B.14.6.1 - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_03100 435591.BDI_1557 1.03e-241 664.0 COG1609@1|root,COG1609@2|Bacteria,4NDW6@976|Bacteroidetes,2FM9W@200643|Bacteroidia,22W8E@171551|Porphyromonadaceae 976|Bacteroidetes K PFAM periplasmic binding protein LacI transcriptional regulator cytR - - ko:K02529,ko:K05499 - - - - ko00000,ko03000 - - - LacI,Peripla_BP_1,Peripla_BP_3 LIIFOLDO_03101 435591.BDI_1556 0.0 889.0 COG2211@1|root,COG2211@2|Bacteria,4NE3F@976|Bacteroidetes,2FMUY@200643|Bacteroidia,22WGR@171551|Porphyromonadaceae 976|Bacteroidetes G MFS/sugar transport protein - - - ko:K16211 - - - - ko00000,ko02000 2.A.2.6 - - MFS_1,MFS_2 LIIFOLDO_03104 435591.BDI_2726 0.0 2115.0 COG0793@1|root,COG4946@1|root,COG0793@2|Bacteria,COG4946@2|Bacteria,4NGU2@976|Bacteroidetes,2FPGA@200643|Bacteroidia,22W33@171551|Porphyromonadaceae 976|Bacteroidetes M Tricorn protease homolog - - - - - - - - - - - - PD40,Peptidase_S41,Tricorn_C1,Tricorn_PDZ LIIFOLDO_03106 435591.BDI_2727 4.32e-140 396.0 COG2431@1|root,COG2431@2|Bacteria,4NMM0@976|Bacteroidetes,2FNT2@200643|Bacteroidia,22XP9@171551|Porphyromonadaceae 976|Bacteroidetes S Lysine exporter LysO - - - - - - - - - - - - Lys_export LIIFOLDO_03107 435591.BDI_2728 7.27e-56 174.0 2EFF3@1|root,3397Y@2|Bacteria,4NVP1@976|Bacteroidetes,2FTU1@200643|Bacteroidia,22YUY@171551|Porphyromonadaceae 976|Bacteroidetes S Lysine exporter LysO - - - - - - - - - - - - Lys_export LIIFOLDO_03108 435591.BDI_2729 6.39e-157 440.0 2BHVX@1|root,32BZS@2|Bacteria,4PFCD@976|Bacteroidetes,2G1IB@200643|Bacteroidia,2310R@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_03109 435591.BDI_2730 1.26e-55 173.0 COG1595@1|root,COG1595@2|Bacteria 2|Bacteria K DNA-templated transcription, initiation - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 LIIFOLDO_03110 435591.BDI_2731 0.0 1557.0 COG3537@1|root,COG3537@2|Bacteria,4NDYB@976|Bacteroidetes,2FMQ9@200643|Bacteroidia,22XIK@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 LIIFOLDO_03111 435591.BDI_2732 2.96e-66 201.0 COG0393@1|root,COG0393@2|Bacteria,4NQGB@976|Bacteroidetes,2FT9V@200643|Bacteroidia,22YBW@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the UPF0145 family - - - - - - - - - - - - YbjQ_1 LIIFOLDO_03112 435591.BDI_2733 1.02e-161 452.0 2BZS9@1|root,2ZC3V@2|Bacteria,4P4JY@976|Bacteroidetes,2FYI4@200643|Bacteroidia 976|Bacteroidetes S DinB superfamily - - - - - - - - - - - - DinB_2 LIIFOLDO_03113 435591.BDI_0050 0.0 1153.0 COG3525@1|root,COG3525@2|Bacteria,4NE08@976|Bacteroidetes,2FNAR@200643|Bacteroidia,22WBH@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 20, catalytic domain - - 3.2.1.52 ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 M00079 R00022,R06004,R11316 RC00049 ko00000,ko00001,ko00002,ko01000,ko03110 - GH20 - CHB_HEX_C_1,Glyco_hydro_20,Glyco_hydro_20b LIIFOLDO_03114 435591.BDI_0051 0.0 1108.0 COG1022@1|root,COG1022@2|Bacteria,4NGFQ@976|Bacteroidetes,2FN1X@200643|Bacteroidia,22W8F@171551|Porphyromonadaceae 976|Bacteroidetes I Long-chain fatty acid--CoA ligase - - 6.2.1.3 ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 M00086 R01280 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 4.C.1.1 - - AMP-binding LIIFOLDO_03116 435591.BDI_0053 0.0 1399.0 COG1629@1|root,COG1629@2|Bacteria,COG4771@2|Bacteria,4P0XV@976|Bacteroidetes,2FWCI@200643|Bacteroidia,22ZUA@171551|Porphyromonadaceae 976|Bacteroidetes P Outer membrane protein beta-barrel family - - - - - - - - - - - - OMP_b-brl_3 LIIFOLDO_03117 435591.BDI_0054 0.0 877.0 COG1252@1|root,COG1252@2|Bacteria,4NE0H@976|Bacteroidetes,2FNZW@200643|Bacteroidia,22XA9@171551|Porphyromonadaceae 976|Bacteroidetes C NADH dehydrogenase ndh - 1.6.99.3 ko:K03885 ko00190,map00190 - - - ko00000,ko00001,ko01000 - - - Pyr_redox_2 LIIFOLDO_03119 435591.BDI_0055 3.05e-199 552.0 COG2207@1|root,COG2207@2|Bacteria,4P4BT@976|Bacteroidetes,2FRD3@200643|Bacteroidia,231DS@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix, arabinose operon control protein - - - ko:K20968 ko02025,map02025 - - - ko00000,ko00001,ko03000 - - - HTH_18 LIIFOLDO_03120 435591.BDI_1045 1.32e-116 333.0 COG1905@1|root,COG1905@2|Bacteria,4NHIQ@976|Bacteroidetes,2FNZ6@200643|Bacteroidia,22XW4@171551|Porphyromonadaceae 976|Bacteroidetes C Thioredoxin-like [2Fe-2S] ferredoxin hndA - 1.12.1.3 ko:K18330 - - - - ko00000,ko01000 - - - 2Fe-2S_thioredx LIIFOLDO_03121 435591.BDI_1044 0.0 1206.0 COG3383@1|root,COG4624@1|root,COG3383@2|Bacteria,COG4624@2|Bacteria,4PKV4@976|Bacteroidetes,2FNTR@200643|Bacteroidia,22XI7@171551|Porphyromonadaceae 976|Bacteroidetes C Iron hydrogenase small subunit hndD - 1.12.1.3,1.17.1.9 ko:K00123,ko:K18332 ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200 - R00519 RC02796 ko00000,ko00001,ko01000 - - - Fe_hyd_SSU,Fe_hyd_lg_C,Fer2_4,Fer4,Fer4_7,Molybdop_Fe4S4,Molybdopterin,Molydop_binding,NADH-G_4Fe-4S_3 LIIFOLDO_03122 435591.BDI_1043 0.0 1228.0 COG1894@1|root,COG1894@2|Bacteria,4NFB5@976|Bacteroidetes,2FN7A@200643|Bacteroidia,22X6V@171551|Porphyromonadaceae 976|Bacteroidetes C NADH-ubiquinone oxidoreductase-F iron-sulfur binding region nuoF - 1.12.1.3,1.6.5.3 ko:K00335,ko:K18331 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - 2Fe-2S_thioredx,Complex1_51K,Fer4,NADH_4Fe-4S,SLBB LIIFOLDO_03123 435591.BDI_1042 1.41e-88 260.0 COG3411@1|root,COG3411@2|Bacteria,4NQQ2@976|Bacteroidetes,2FTGH@200643|Bacteroidia,22Y5H@171551|Porphyromonadaceae 976|Bacteroidetes C Ferredoxin - - 1.12.1.3 ko:K17992 - - - - ko00000,ko01000 - - - - LIIFOLDO_03124 435591.BDI_1041 1.94e-215 594.0 COG1045@1|root,COG1045@2|Bacteria,4NGZ7@976|Bacteroidetes,2FM9U@200643|Bacteroidia,22XAZ@171551|Porphyromonadaceae 976|Bacteroidetes E Serine acetyltransferase cysE - 2.3.1.30 ko:K00640 ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111 M00021 R00586 RC00004,RC00041 ko00000,ko00001,ko00002,ko01000 - - - Hexapep,SATase_N LIIFOLDO_03125 435591.BDI_1040 0.0 1474.0 COG3055@1|root,COG3055@2|Bacteria,4PKTP@976|Bacteroidetes,2G04B@200643|Bacteroidia,23237@171551|Porphyromonadaceae 976|Bacteroidetes S Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - - - - - - - - - - Kelch_1 LIIFOLDO_03126 435591.BDI_1039 5.83e-232 637.0 COG0790@1|root,COG0790@2|Bacteria,4NZQT@976|Bacteroidetes,2FWAZ@200643|Bacteroidia 976|Bacteroidetes S COG0790 FOG TPR repeat, SEL1 subfamily - - - - - - - - - - - - PEGA LIIFOLDO_03127 657309.BXY_41780 1.78e-52 167.0 COG2361@1|root,COG2361@2|Bacteria,4NSEC@976|Bacteroidetes,2FSVZ@200643|Bacteroidia,4AR6Z@815|Bacteroidaceae 976|Bacteroidetes S Protein of unknown function DUF86 - - - - - - - - - - - - DUF86 LIIFOLDO_03129 435591.BDI_2432 3.16e-177 496.0 2B69Q@1|root,31Z76@2|Bacteria,4P4FW@976|Bacteroidetes,2FTT6@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_03131 435591.BDI_2434 1.33e-315 859.0 COG1160@1|root,COG1160@2|Bacteria,4NE2J@976|Bacteroidetes,2FN63@200643|Bacteroidia,22VY2@171551|Porphyromonadaceae 976|Bacteroidetes S GTPase that plays an essential role in the late steps of ribosome biogenesis der - - ko:K03977 - - - - ko00000,ko03009 - - - KH_dom-like,MMR_HSR1 LIIFOLDO_03132 435591.BDI_2435 4.38e-209 578.0 COG1159@1|root,COG1159@2|Bacteria,4NES2@976|Bacteroidetes,2FN64@200643|Bacteroidia,22WCP@171551|Porphyromonadaceae 976|Bacteroidetes S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism era - - ko:K03595 - - - - ko00000,ko03009,ko03029 - - - KH_2,MMR_HSR1 LIIFOLDO_03133 435591.BDI_2436 6.79e-250 684.0 COG0332@1|root,COG0332@2|Bacteria,4NEYH@976|Bacteroidetes,2FM5X@200643|Bacteroidia,22VVW@171551|Porphyromonadaceae 976|Bacteroidetes I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids fabH - 2.3.1.180 ko:K00648 ko00061,ko01100,ko01212,map00061,map01100,map01212 M00082,M00083 R10707 RC00004,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 - - - ACP_syn_III,ACP_syn_III_C LIIFOLDO_03134 411477.PARMER_03669 1.73e-40 133.0 COG0333@1|root,COG0333@2|Bacteria,4NUXU@976|Bacteroidetes,2FUZD@200643|Bacteroidia,22YPG@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the bacterial ribosomal protein bL32 family rpmF - - ko:K02911 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011,ko03029 - - - Ribosomal_L32p LIIFOLDO_03135 435591.BDI_2437 1.36e-137 389.0 COG1399@1|root,COG1399@2|Bacteria,4NMQT@976|Bacteroidetes,2FPCJ@200643|Bacteroidia,22XVX@171551|Porphyromonadaceae 976|Bacteroidetes S Uncharacterized ACR, COG1399 - - - - - - - - - - - - DUF177 LIIFOLDO_03136 435591.BDI_2438 1.94e-268 736.0 COG4191@1|root,COG4191@2|Bacteria,4NEMP@976|Bacteroidetes,2FPJR@200643|Bacteroidia,22VVD@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase vicK - - - - - - - - - - - HATPase_c LIIFOLDO_03137 435591.BDI_1196 3.83e-155 435.0 COG0637@1|root,COG0637@2|Bacteria,4NEEH@976|Bacteroidetes,2FM7C@200643|Bacteroidia,22Y09@171551|Porphyromonadaceae 976|Bacteroidetes S Haloacid dehalogenase-like hydrolase pgmB - - - - - - - - - - - HAD_2 LIIFOLDO_03138 435591.BDI_1197 9.61e-110 315.0 COG3637@1|root,COG3637@2|Bacteria,4NXWX@976|Bacteroidetes,2FRFV@200643|Bacteroidia,22YTA@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl LIIFOLDO_03139 435591.BDI_1198 0.0 1123.0 COG4690@1|root,COG4690@2|Bacteria,4NE03@976|Bacteroidetes,2FPSX@200643|Bacteroidia,22WBK@171551|Porphyromonadaceae 976|Bacteroidetes M Dipeptidase - - - - - - - - - - - - Peptidase_C69 LIIFOLDO_03140 435591.BDI_1199 0.0 907.0 COG1055@1|root,COG1055@2|Bacteria,4P1MF@976|Bacteroidetes,2FXAM@200643|Bacteroidia,22ZNM@171551|Porphyromonadaceae 976|Bacteroidetes P Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - CitMHS LIIFOLDO_03141 435591.BDI_1200 3.09e-208 575.0 COG0648@1|root,COG0648@2|Bacteria,4NJDP@976|Bacteroidetes,2FPM6@200643|Bacteroidia,22WPU@171551|Porphyromonadaceae 976|Bacteroidetes L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin nfo GO:0003674,GO:0003824,GO:0003906,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.1.21.2 ko:K01151 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - AP_endonuc_2 LIIFOLDO_03142 435591.BDI_1201 1.46e-115 330.0 COG2050@1|root,COG2050@2|Bacteria,4NRF7@976|Bacteroidetes,2G31E@200643|Bacteroidia,22YDT@171551|Porphyromonadaceae 976|Bacteroidetes Q Thioesterase superfamily - - - - - - - - - - - - 4HBT LIIFOLDO_03143 435591.BDI_1202 1.5e-128 365.0 COG1945@1|root,COG1945@2|Bacteria,4NKCB@976|Bacteroidetes,2FQZP@200643|Bacteroidia,22W9R@171551|Porphyromonadaceae 976|Bacteroidetes S arginine decarboxylase - - 4.1.1.19 ko:K02626 ko00330,ko01100,map00330,map01100 M00133 R00566 RC00299 ko00000,ko00001,ko00002,ko01000 - - - PvlArgDC LIIFOLDO_03144 435591.BDI_1203 2.79e-143 404.0 COG0605@1|root,COG0605@2|Bacteria,4NDZ4@976|Bacteroidetes,2FNA0@200643|Bacteroidia,22W98@171551|Porphyromonadaceae 976|Bacteroidetes C Destroys radicals which are normally produced within the cells and which are toxic to biological systems sodB - 1.15.1.1 ko:K04564 ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016 - - - ko00000,ko00001,ko01000 - - - Sod_Fe_C,Sod_Fe_N LIIFOLDO_03147 435591.BDI_1206 4.7e-173 483.0 2C09N@1|root,2Z82F@2|Bacteria,4NF07@976|Bacteroidetes,2FPES@200643|Bacteroidia,22XCC@171551|Porphyromonadaceae 976|Bacteroidetes S NigD-like N-terminal OB domain - - - - - - - - - - - - NigD_C,NigD_N LIIFOLDO_03149 742817.HMPREF9449_02953 3.95e-143 411.0 COG0697@1|root,COG0697@2|Bacteria,4NE8D@976|Bacteroidetes,2FPEB@200643|Bacteroidia,22X0X@171551|Porphyromonadaceae 976|Bacteroidetes EG EamA-like transporter family - - - - - - - - - - - - EamA LIIFOLDO_03150 435591.BDI_1716 2.58e-310 847.0 COG0534@1|root,COG0534@2|Bacteria,4NI79@976|Bacteroidetes,2FPM0@200643|Bacteroidia,22XCQ@171551|Porphyromonadaceae 976|Bacteroidetes V MatE - - - - - - - - - - - - MatE LIIFOLDO_03151 435591.BDI_1717 1.71e-131 374.0 COG0664@1|root,COG0664@2|Bacteria,4NPC6@976|Bacteroidetes,2FQAG@200643|Bacteroidia,22YBX@171551|Porphyromonadaceae 976|Bacteroidetes T Cyclic nucleotide-monophosphate binding domain - - - - - - - - - - - - cNMP_binding LIIFOLDO_03152 272559.BF9343_2099 1.94e-24 99.8 28KF4@1|root,2Z96G@2|Bacteria,4NPV4@976|Bacteroidetes,2FP4M@200643|Bacteroidia,4ANKK@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - BetR LIIFOLDO_03153 435591.BDI_1719 2.69e-228 629.0 28KF4@1|root,2ZA1C@2|Bacteria,4NKYA@976|Bacteroidetes,2FPMQ@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_03154 435591.BDI_1720 1.34e-146 413.0 COG0664@1|root,COG0664@2|Bacteria,4NRFI@976|Bacteroidetes,2G2ZU@200643|Bacteroidia,22Y4S@171551|Porphyromonadaceae 976|Bacteroidetes K Cyclic nucleotide-monophosphate binding domain - - - - - - - - - - - - HTH_Crp_2,cNMP_binding LIIFOLDO_03155 435591.BDI_1721 0.0 1105.0 COG0369@1|root,COG1151@2|Bacteria,4NGRB@976|Bacteroidetes,2FMDK@200643|Bacteroidia,22W6M@171551|Porphyromonadaceae 976|Bacteroidetes C Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O hcp GO:0000302,GO:0003674,GO:0003824,GO:0004601,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016661,GO:0016684,GO:0042221,GO:0042493,GO:0042542,GO:0046677,GO:0050418,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1990748 1.7.99.1 ko:K05601 ko00910,map00910 - R00143 RC02797 ko00000,ko00001,ko01000 - - - Prismane LIIFOLDO_03156 435591.BDI_1722 7.82e-204 564.0 COG2240@1|root,COG2240@2|Bacteria,4NNJP@976|Bacteroidetes,2FNIJ@200643|Bacteroidia,22Z9M@171551|Porphyromonadaceae 976|Bacteroidetes H Phosphomethylpyrimidine kinase pdxK - 2.7.1.35 ko:K00868 ko00750,ko01100,map00750,map01100 - R00174,R01909,R02493 RC00002,RC00017 ko00000,ko00001,ko01000 - - - Phos_pyr_kin LIIFOLDO_03157 435591.BDI_3216 0.0 950.0 COG0457@1|root,COG0457@2|Bacteria,4NVW0@976|Bacteroidetes,2FNSS@200643|Bacteroidia,22YH2@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeats - - - - - - - - - - - - TPR_16,TPR_19,TPR_6,TPR_8 LIIFOLDO_03158 435591.BDI_3215 0.0 1194.0 COG0810@1|root,COG4219@1|root,COG0810@2|Bacteria,COG4219@2|Bacteria,4NDWS@976|Bacteroidetes,2FNCU@200643|Bacteroidia,22X60@171551|Porphyromonadaceae 976|Bacteroidetes KMT Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - - - - - - - - - - CarbopepD_reg_2,Peptidase_M56,Plug,TonB_C LIIFOLDO_03159 435591.BDI_3214 3.95e-82 243.0 COG3682@1|root,COG3682@2|Bacteria,4NT4V@976|Bacteroidetes,2FSGP@200643|Bacteroidia,22Y4H@171551|Porphyromonadaceae 976|Bacteroidetes K Transcriptional regulator - - - - - - - - - - - - Penicillinase_R LIIFOLDO_03160 435591.BDI_3213 1.22e-108 313.0 COG0810@1|root,COG0810@2|Bacteria,4NW2E@976|Bacteroidetes,2FWGT@200643|Bacteroidia,230RW@171551|Porphyromonadaceae 976|Bacteroidetes M Gram-negative bacterial TonB protein C-terminal - - - - - - - - - - - - Peptidase_M56,TonB_C LIIFOLDO_03161 435591.BDI_3212 3.4e-296 808.0 COG3391@1|root,COG3391@2|Bacteria,4P174@976|Bacteroidetes,2FRTQ@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function (DUF4934) - - - - - - - - - - - - DUF5128 LIIFOLDO_03162 435591.BDI_2920 5.4e-35 145.0 COG0457@1|root,COG0457@2|Bacteria,4NRRJ@976|Bacteroidetes,2FPTP@200643|Bacteroidia,230YK@171551|Porphyromonadaceae 976|Bacteroidetes T Tetratricopeptide repeat protein - - - - - - - - - - - - TPR_12,TPR_8 LIIFOLDO_03163 435591.BDI_0138 9.03e-149 426.0 COG4372@1|root,COG4372@2|Bacteria,4PKE4@976|Bacteroidetes,2FPKQ@200643|Bacteroidia,22W9H@171551|Porphyromonadaceae 976|Bacteroidetes S Transposase - - - - - - - - - - - - - LIIFOLDO_03164 435591.BDI_0139 1.17e-143 404.0 COG0664@1|root,COG0664@2|Bacteria,4NHXN@976|Bacteroidetes,2FYUZ@200643|Bacteroidia,230W6@171551|Porphyromonadaceae 976|Bacteroidetes T Cyclic nucleotide-monophosphate binding domain - - - - - - - - - - - - cNMP_binding LIIFOLDO_03165 435591.BDI_0140 0.0 872.0 COG1538@1|root,COG1538@2|Bacteria,4NF4V@976|Bacteroidetes,2FM0S@200643|Bacteroidia,22WY2@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - - - - - - - - - - OEP LIIFOLDO_03166 435591.BDI_0141 4.94e-224 619.0 COG0845@1|root,COG0845@2|Bacteria,4NECC@976|Bacteroidetes,2FMDD@200643|Bacteroidia,22WYE@171551|Porphyromonadaceae 976|Bacteroidetes M Hemolysin secretion protein D - - - ko:K01993 - - - - ko00000 - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 LIIFOLDO_03167 435591.BDI_0142 2.06e-278 761.0 COG1668@1|root,COG1668@2|Bacteria,4NG99@976|Bacteroidetes,2FNNT@200643|Bacteroidia,22WTF@171551|Porphyromonadaceae 976|Bacteroidetes CP membrane - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_3 LIIFOLDO_03168 435591.BDI_0143 9.8e-297 810.0 COG0842@1|root,COG0842@2|Bacteria,4NGZG@976|Bacteroidetes,2FMX5@200643|Bacteroidia,22W5N@171551|Porphyromonadaceae 976|Bacteroidetes V ABC-2 family transporter protein - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_3 LIIFOLDO_03169 435591.BDI_0144 0.0 920.0 COG1387@1|root,COG1387@2|Bacteria,4NMBC@976|Bacteroidetes,2FNU7@200643|Bacteroidia,22ZUG@171551|Porphyromonadaceae 976|Bacteroidetes E Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080 LIIFOLDO_03170 435591.BDI_0207 0.0 1356.0 COG0339@1|root,COG0339@2|Bacteria,4NFYA@976|Bacteroidetes,2FN8J@200643|Bacteroidia,22X1E@171551|Porphyromonadaceae 976|Bacteroidetes E peptidase dcp - 3.4.15.5,3.4.24.70 ko:K01284,ko:K01414 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M3 LIIFOLDO_03171 435591.BDI_0206 7.65e-87 256.0 COG2131@1|root,COG2131@2|Bacteria,4NM48@976|Bacteroidetes,2FRZ1@200643|Bacteroidia,22XV8@171551|Porphyromonadaceae 976|Bacteroidetes F deaminase comEB - 3.5.4.12 ko:K01493 ko00240,ko01100,map00240,map01100 M00429 R01663 RC00074 ko00000,ko00001,ko00002,ko01000,ko02044 - - - dCMP_cyt_deam_1 LIIFOLDO_03172 435591.BDI_0205 0.0 1140.0 COG0793@1|root,COG0793@2|Bacteria,4NEGV@976|Bacteroidetes,2FP0Y@200643|Bacteroidia,22W6I@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the peptidase S41A family ctp - 3.4.21.102 ko:K03797 - - - - ko00000,ko01000,ko01002 - - - PDZ_2,Peptidase_S41 LIIFOLDO_03173 435591.BDI_0204 7.79e-111 319.0 COG0212@1|root,COG0212@2|Bacteria,4NQRG@976|Bacteroidetes,2FQQB@200643|Bacteroidia,22Y6E@171551|Porphyromonadaceae 976|Bacteroidetes H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family fthC - 6.3.3.2 ko:K01934 ko00670,ko01100,map00670,map01100 - R02301 RC00183 ko00000,ko00001,ko01000 - - - 5-FTHF_cyc-lig LIIFOLDO_03174 435591.BDI_0203 7.04e-63 192.0 COG5512@1|root,COG5512@2|Bacteria,4NSDR@976|Bacteroidetes,2FUN4@200643|Bacteroidia,22YQJ@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF721) - - - - - - - - - - - - DUF721 LIIFOLDO_03175 435591.BDI_0202 3.44e-261 716.0 COG1195@1|root,COG1195@2|Bacteria,4NFHN@976|Bacteroidetes,2FMHP@200643|Bacteroidia,22W50@171551|Porphyromonadaceae 976|Bacteroidetes L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP recF - - ko:K03629 ko03440,map03440 - - - ko00000,ko00001,ko03400 - - - SMC_N LIIFOLDO_03176 435591.BDI_0201 5.21e-155 436.0 COG0457@1|root,COG0457@2|Bacteria,4PKF6@976|Bacteroidetes,2FNWT@200643|Bacteroidia,22XM8@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat - - - - - - - - - - - - TPR_12,TPR_16,TPR_2,TPR_6,TPR_7,TPR_8 LIIFOLDO_03177 435591.BDI_0200 6.76e-113 324.0 COG0054@1|root,COG0054@2|Bacteria,4NNUC@976|Bacteroidetes,2FNGS@200643|Bacteroidia,22XPW@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin ribH GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 ko:K00794 ko00740,ko01100,ko01110,map00740,map01100,map01110 M00125 R04457 RC00960 ko00000,ko00001,ko00002,ko01000 - - - DMRL_synthase LIIFOLDO_03179 435591.BDI_2305 0.0 1056.0 COG0702@1|root,COG0702@2|Bacteria,4PMY5@976|Bacteroidetes,2G0KD@200643|Bacteroidia 976|Bacteroidetes GM NAD(P)H-binding - - - - - - - - - - - - 3Beta_HSD LIIFOLDO_03180 435591.BDI_2306 4.01e-48 153.0 arCOG05093@1|root,339N6@2|Bacteria,4NXVG@976|Bacteroidetes,2FUSZ@200643|Bacteroidia,2317K@171551|Porphyromonadaceae 976|Bacteroidetes S Winged helix-turn-helix domain (DUF2582) - - - - - - - - - - - - DUF2582 LIIFOLDO_03181 435591.BDI_2307 1.3e-205 568.0 COG1082@1|root,COG1082@2|Bacteria,4NHGW@976|Bacteroidetes,2FNTZ@200643|Bacteroidia,22ZMA@171551|Porphyromonadaceae 976|Bacteroidetes G Xylose isomerase-like TIM barrel - - 5.1.3.30,5.1.3.31 ko:K18910 - - R10817,R10818 RC03111,RC03283 ko00000,ko01000 - - - AP_endonuc_2 LIIFOLDO_03182 435591.BDI_2308 5.51e-308 837.0 COG1524@1|root,COG1524@2|Bacteria,4NFFG@976|Bacteroidetes,2FNFJ@200643|Bacteroidia,22WMT@171551|Porphyromonadaceae 976|Bacteroidetes S phosphodiesterase - - 3.1.3.1 ko:K01113 ko00790,ko01100,ko02020,map00790,map01100,map02020 M00126 R04620 RC00017 ko00000,ko00001,ko00002,ko01000 - - - Phosphodiest LIIFOLDO_03183 435591.BDI_2309 0.0 2246.0 COG1629@1|root,COG4771@2|Bacteria,4NF66@976|Bacteroidetes,2FKYY@200643|Bacteroidia,22ZY6@171551|Porphyromonadaceae 976|Bacteroidetes P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarboxypepD_reg,Plug,TonB_dep_Rec LIIFOLDO_03185 435591.BDI_3661 0.0 876.0 COG0642@1|root,COG2205@2|Bacteria,4P2V5@976|Bacteroidetes,2FNK3@200643|Bacteroidia 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - HATPase_c LIIFOLDO_03186 435591.BDI_3660 8.06e-165 461.0 COG0745@1|root,COG0745@2|Bacteria,4NTDZ@976|Bacteroidetes,2FS9E@200643|Bacteroidia,230PD@171551|Porphyromonadaceae 976|Bacteroidetes T Transcriptional regulatory protein, C terminal - - - - - - - - - - - - Response_reg,Trans_reg_C LIIFOLDO_03187 435591.BDI_3659 3.32e-263 721.0 COG1408@1|root,COG1408@2|Bacteria,4NFCH@976|Bacteroidetes,2FQ9F@200643|Bacteroidia,22WWB@171551|Porphyromonadaceae 976|Bacteroidetes S Calcineurin-like phosphoesterase superfamily domain - - - ko:K07098 - - - - ko00000 - - - Metallophos LIIFOLDO_03188 435591.BDI_3658 5.13e-288 786.0 COG1408@1|root,COG1408@2|Bacteria,4NFCH@976|Bacteroidetes,2FQ9F@200643|Bacteroidia,22XNV@171551|Porphyromonadaceae 976|Bacteroidetes S Ser Thr phosphatase family protein - - - ko:K07098 - - - - ko00000 - - - Metallophos LIIFOLDO_03189 435591.BDI_3657 0.0 1105.0 COG0793@1|root,COG0793@2|Bacteria,4NDWU@976|Bacteroidetes,2FM0W@200643|Bacteroidia,22W1I@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the peptidase S41A family prc - 3.4.21.102 ko:K03797 - - - - ko00000,ko01000,ko01002 - - - PDZ,PDZ_2,Peptidase_S41 LIIFOLDO_03190 435591.BDI_3656 1.05e-228 630.0 COG0524@1|root,COG0524@2|Bacteria,4NIHI@976|Bacteroidetes,2FPRJ@200643|Bacteroidia,22WDP@171551|Porphyromonadaceae 976|Bacteroidetes G pfkB family carbohydrate kinase - - - - - - - - - - - - PfkB LIIFOLDO_03191 435591.BDI_1186 5.02e-110 316.0 COG1956@1|root,COG1956@2|Bacteria,4NM6D@976|Bacteroidetes,2FS26@200643|Bacteroidia,22XVQ@171551|Porphyromonadaceae 976|Bacteroidetes T GAF domain msrC - 1.8.4.14 ko:K08968 ko00270,map00270 - R02025 RC00639 ko00000,ko00001,ko01000 - - - GAF,GAF_2 LIIFOLDO_03192 435591.BDI_1187 0.0 1880.0 COG2887@1|root,COG3893@1|root,COG2887@2|Bacteria,COG3893@2|Bacteria,4NFZQ@976|Bacteroidetes,2FN03@200643|Bacteroidia,22W74@171551|Porphyromonadaceae 976|Bacteroidetes L PD-(D/E)XK nuclease superfamily - - - - - - - - - - - - PDDEXK_1 LIIFOLDO_03193 435591.BDI_1188 4.04e-240 659.0 COG0667@1|root,COG0667@2|Bacteria,4NFCN@976|Bacteroidetes,2FMAG@200643|Bacteroidia,22W5H@171551|Porphyromonadaceae 976|Bacteroidetes C Aldo/keto reductase family gpr - - ko:K19265 - - - - ko00000,ko01000 - - - Aldo_ket_red LIIFOLDO_03194 435591.BDI_1189 0.0 1049.0 COG3119@1|root,COG3119@2|Bacteria,4NF1X@976|Bacteroidetes,2FMGA@200643|Bacteroidia,22W18@171551|Porphyromonadaceae 976|Bacteroidetes P Sulfatase - - - - - - - - - - - - DUF4976,Sulfatase LIIFOLDO_03195 435591.BDI_3089 2.61e-302 823.0 COG3049@1|root,COG3049@2|Bacteria,4NGW8@976|Bacteroidetes,2FPQI@200643|Bacteroidia,22WMX@171551|Porphyromonadaceae 976|Bacteroidetes M Linear amide C-N hydrolases, choloylglycine hydrolase family - - - - - - - - - - - - AAT LIIFOLDO_03196 435591.BDI_3088 7.13e-115 328.0 COG3467@1|root,COG3467@2|Bacteria,4NPDK@976|Bacteroidetes,2G2MH@200643|Bacteroidia,22Y2U@171551|Porphyromonadaceae 976|Bacteroidetes S Pfam:Pyridox_oxidase - - - ko:K07005 - - - - ko00000 - - - Pyridox_ox_2 LIIFOLDO_03197 435591.BDI_3087 1.27e-111 329.0 COG3595@1|root,COG3595@2|Bacteria,4NSAQ@976|Bacteroidetes,2FPF9@200643|Bacteroidia,22YP6@171551|Porphyromonadaceae 976|Bacteroidetes S Putative auto-transporter adhesin, head GIN domain - - - - - - - - - - - - DUF2807 LIIFOLDO_03198 435591.BDI_3086 5.39e-146 417.0 COG3595@1|root,COG3595@2|Bacteria,4NSAQ@976|Bacteroidetes,2FPF9@200643|Bacteroidia,22YP6@171551|Porphyromonadaceae 976|Bacteroidetes S Putative auto-transporter adhesin, head GIN domain - - - - - - - - - - - - DUF2807 LIIFOLDO_03200 435591.BDI_3085 1.75e-184 513.0 COG3595@1|root,COG3595@2|Bacteria,4NSAQ@976|Bacteroidetes,2G1GM@200643|Bacteroidia,22YYE@171551|Porphyromonadaceae 976|Bacteroidetes S Putative auto-transporter adhesin, head GIN domain - - - - - - - - - - - - DUF2807 LIIFOLDO_03201 435591.BDI_3084 2.22e-26 110.0 COG3595@1|root,COG3595@2|Bacteria,4PK6K@976|Bacteroidetes,2G1GN@200643|Bacteroidia,22Z17@171551|Porphyromonadaceae 976|Bacteroidetes S Putative auto-transporter adhesin, head GIN domain - - - - - - - - - - - - DUF2807 LIIFOLDO_03202 435591.BDI_3084 3.34e-175 490.0 COG3595@1|root,COG3595@2|Bacteria,4PK6K@976|Bacteroidetes,2G1GN@200643|Bacteroidia,22Z17@171551|Porphyromonadaceae 976|Bacteroidetes S Putative auto-transporter adhesin, head GIN domain - - - - - - - - - - - - DUF2807 LIIFOLDO_03203 435591.BDI_3083 8.94e-251 687.0 COG0451@1|root,COG0451@2|Bacteria,4NEJJ@976|Bacteroidetes,2FNM5@200643|Bacteroidia,22W40@171551|Porphyromonadaceae 976|Bacteroidetes GM NAD dependent epimerase dehydratase family protein - - 5.1.3.2 ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00361,M00362,M00632 R00291,R02984 RC00289 ko00000,ko00001,ko00002,ko01000 - - - Epimerase LIIFOLDO_03204 411477.PARMER_02775 2.78e-22 94.0 COG1121@1|root,COG1121@2|Bacteria,4NHZ9@976|Bacteroidetes,2FM2P@200643|Bacteroidia,22VV3@171551|Porphyromonadaceae 976|Bacteroidetes P ABC transporter, ATP-binding protein znuC - - ko:K09817 ko02010,map02010 M00242 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.15.3,3.A.1.15.5 - - ABC_tran LIIFOLDO_03205 435591.BDI_3082 8.34e-88 262.0 COG1121@1|root,COG1121@2|Bacteria,4NHZ9@976|Bacteroidetes,2FM2P@200643|Bacteroidia,22VV3@171551|Porphyromonadaceae 976|Bacteroidetes P ABC transporter, ATP-binding protein znuC - - ko:K09817 ko02010,map02010 M00242 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.15.3,3.A.1.15.5 - - ABC_tran LIIFOLDO_03206 435591.BDI_0359 0.0 980.0 COG0265@1|root,COG0265@2|Bacteria,4NFCS@976|Bacteroidetes,2FMUA@200643|Bacteroidia,22W8K@171551|Porphyromonadaceae 976|Bacteroidetes O deoxyribonuclease HsdR degQ - - - - - - - - - - - PDZ_2,Trypsin_2 LIIFOLDO_03207 1122931.AUAE01000014_gene2043 3.25e-192 535.0 COG0568@1|root,COG0568@2|Bacteria,4NEBF@976|Bacteroidetes,2FNVQ@200643|Bacteroidia,22XDM@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released rpoD - - ko:K03086 - - - - ko00000,ko03021 - - - Sigma70_r1_2,Sigma70_r2,Sigma70_r3,Sigma70_r4 LIIFOLDO_03208 435591.BDI_0361 0.0 998.0 COG3538@1|root,COG3538@2|Bacteria,4NGY6@976|Bacteroidetes,2FM8H@200643|Bacteroidia,22VYN@171551|Porphyromonadaceae 976|Bacteroidetes S DUF1237 - - - ko:K09704 - - - - ko00000 - - - Glyco_hydro_125 LIIFOLDO_03209 435591.BDI_0362 0.0 1099.0 COG3119@1|root,COG3119@2|Bacteria,4NHH7@976|Bacteroidetes,2FMAW@200643|Bacteroidia,22W26@171551|Porphyromonadaceae 976|Bacteroidetes P Domain of unknown function (DUF4976) - - - - - - - - - - - - DUF4976,Sulfatase LIIFOLDO_03210 435591.BDI_1028 5.36e-215 593.0 COG3137@1|root,COG3137@2|Bacteria,4NGB2@976|Bacteroidetes,2FPFT@200643|Bacteroidia,22XYJ@171551|Porphyromonadaceae 976|Bacteroidetes M Protein of unknown function (DUF3078) - - - - - - - - - - - - DUF3078 LIIFOLDO_03211 435591.BDI_1029 0.0 941.0 COG4623@1|root,COG4623@2|Bacteria,4NHFW@976|Bacteroidetes,2FN2R@200643|Bacteroidia,22W80@171551|Porphyromonadaceae 976|Bacteroidetes M Transglycosylase SLT domain mltF - - ko:K18691 - - - - ko00000,ko01000,ko01011 - - - SBP_bac_3,SLT LIIFOLDO_03212 435591.BDI_1030 0.0 949.0 COG2265@1|root,COG2265@2|Bacteria,4NFP1@976|Bacteroidetes,2FNRC@200643|Bacteroidia,22X3X@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family rumA - 2.1.1.190 ko:K03215 - - - - ko00000,ko01000,ko03009 - - - TRAM,tRNA_U5-meth_tr LIIFOLDO_03213 435591.BDI_1031 0.0 1780.0 COG0574@1|root,COG1080@1|root,COG0574@2|Bacteria,COG1080@2|Bacteria,4NEHE@976|Bacteroidetes,2FM8K@200643|Bacteroidia,22W14@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the PEP-utilizing enzyme family ppdK - 2.7.9.1 ko:K01006 ko00620,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00710,map00720,map01100,map01120,map01200 M00169,M00171,M00172,M00173 R00206 RC00002,RC00015 ko00000,ko00001,ko00002,ko01000 - - - PEP-utilizers,PEP-utilizers_C,PPDK_N LIIFOLDO_03214 435591.BDI_1425 6.99e-115 329.0 2F1WF@1|root,33UW4@2|Bacteria,4P2E5@976|Bacteroidetes,2FRER@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_03215 435591.BDI_1424 3.7e-236 647.0 COG3828@1|root,COG3828@2|Bacteria,4NFMU@976|Bacteroidetes,2FN9Z@200643|Bacteroidia 976|Bacteroidetes S Trehalose utilisation - - - - - - - - - - - - ThuA LIIFOLDO_03217 435591.BDI_1423 0.0 1494.0 COG0178@1|root,COG0178@2|Bacteria,4NJCU@976|Bacteroidetes,2FR98@200643|Bacteroidia,22XFE@171551|Porphyromonadaceae 976|Bacteroidetes L ABC transporter - - - - - - - - - - - - ABC_tran LIIFOLDO_03218 435591.BDI_1422 0.0 1952.0 COG3250@1|root,COG3250@2|Bacteria,4NEP8@976|Bacteroidetes,2FMRW@200643|Bacteroidia,22X6P@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 2 - - - - - - - - - - - - Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N LIIFOLDO_03219 435591.BDI_3738 2.45e-244 671.0 COG2067@1|root,COG2067@2|Bacteria,4NHNC@976|Bacteroidetes,2FP24@200643|Bacteroidia,22WI2@171551|Porphyromonadaceae 976|Bacteroidetes I penicillin-binding protein porQ - - - - - - - - - - - PorP_SprF LIIFOLDO_03220 435591.BDI_3737 2.2e-107 315.0 COG0810@1|root,COG0810@2|Bacteria,4NMG7@976|Bacteroidetes,2FPKW@200643|Bacteroidia,22XTD@171551|Porphyromonadaceae 976|Bacteroidetes M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins tonB2 - - ko:K03832 - - - - ko00000,ko02000 2.C.1.1 - - TonB_C LIIFOLDO_03221 435591.BDI_3736 7.16e-231 635.0 COG0142@1|root,COG0142@2|Bacteria,4NEGQ@976|Bacteroidetes,2FPV5@200643|Bacteroidia,22VXB@171551|Porphyromonadaceae 976|Bacteroidetes H Belongs to the FPP GGPP synthase family ispA - 2.5.1.1,2.5.1.10,2.5.1.29 ko:K13789 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00364,M00366 R01658,R02003,R02061 RC00279 ko00000,ko00001,ko00002,ko01000,ko01006 - - - polyprenyl_synt LIIFOLDO_03222 435591.BDI_3735 3.17e-191 530.0 COG0084@1|root,COG0084@2|Bacteria,4NEVW@976|Bacteroidetes,2FMP9@200643|Bacteroidia,22XKP@171551|Porphyromonadaceae 976|Bacteroidetes L hydrolase, TatD tatD - - ko:K03424 - - - - ko00000,ko01000 - - - TatD_DNase LIIFOLDO_03224 435591.BDI_3733 5.76e-162 455.0 COG0811@1|root,COG0811@2|Bacteria,4NEA2@976|Bacteroidetes,2FMMQ@200643|Bacteroidia,22WD0@171551|Porphyromonadaceae 976|Bacteroidetes U MotA TolQ ExbB proton channel family protein exbB - - ko:K03561 - - - - ko00000,ko02000 1.A.30.2.1 - - MotA_ExbB LIIFOLDO_03225 435591.BDI_3732 2.3e-101 294.0 2FH6B@1|root,3490R@2|Bacteria,4NSP7@976|Bacteroidetes,2FRZ3@200643|Bacteroidia,22YSE@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location CytoplasmicMembrane, score - - - - - - - - - - - - - LIIFOLDO_03226 435591.BDI_3731 2.26e-136 386.0 COG0848@1|root,COG0848@2|Bacteria,4NHYQ@976|Bacteroidetes,2FMZ4@200643|Bacteroidia,22Y6V@171551|Porphyromonadaceae 976|Bacteroidetes U Biopolymer transporter ExbD - - - - - - - - - - - - ExbD LIIFOLDO_03227 435591.BDI_3730 6.1e-101 293.0 COG0848@1|root,COG0848@2|Bacteria,4NKT1@976|Bacteroidetes,2FM42@200643|Bacteroidia,22XTT@171551|Porphyromonadaceae 976|Bacteroidetes U Biopolymer transporter ExbD - - - ko:K03559 - - - - ko00000,ko02000 1.A.30.2.1 - - ExbD LIIFOLDO_03228 435591.BDI_3729 2.69e-128 364.0 COG0454@1|root,COG0456@2|Bacteria,4NSIB@976|Bacteroidetes,2FPE3@200643|Bacteroidia,22YKB@171551|Porphyromonadaceae 976|Bacteroidetes K Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_1,Acetyltransf_7 LIIFOLDO_03229 435591.BDI_0485 0.0 1073.0 COG3119@1|root,COG3119@2|Bacteria,4PKER@976|Bacteroidetes,2G3EN@200643|Bacteroidia,22W42@171551|Porphyromonadaceae 976|Bacteroidetes P Type I phosphodiesterase / nucleotide pyrophosphatase pafA - - - - - - - - - - - Phosphodiest LIIFOLDO_03230 435591.BDI_0486 2.05e-300 817.0 28I3N@1|root,2Z87C@2|Bacteria,4NE8P@976|Bacteroidetes,2FMN4@200643|Bacteroidia,22WN0@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4105) - - - - - - - - - - - - DUF4105 LIIFOLDO_03232 435591.BDI_0488 1.05e-177 495.0 COG0548@1|root,COG0548@2|Bacteria,4NDY8@976|Bacteroidetes,2FN66@200643|Bacteroidia,22VYC@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the acetylglutamate kinase family. ArgB subfamily argB GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 ko:K00930 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028 R02649 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 - - - AA_kinase LIIFOLDO_03233 435591.BDI_0489 1.2e-171 477.0 COG1413@1|root,COG1413@2|Bacteria,4NK5S@976|Bacteroidetes,2FW5F@200643|Bacteroidia,22Z3I@171551|Porphyromonadaceae 976|Bacteroidetes C Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080 LIIFOLDO_03234 226186.BT_1709 6.73e-98 291.0 COG1215@1|root,COG1215@2|Bacteria,4NNH7@976|Bacteroidetes,2FQ3H@200643|Bacteroidia,4APS3@815|Bacteroidaceae 976|Bacteroidetes M Glycosyltransferase, group 2 family protein - - - - - - - - - - - - Glycos_transf_2 LIIFOLDO_03235 1122931.AUAE01000005_gene3292 3.89e-09 53.9 2DT1D@1|root,33I8Q@2|Bacteria,4NZ02@976|Bacteroidetes,2FVES@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_03236 435591.BDI_1402 0.0 1179.0 COG0173@1|root,COG0173@2|Bacteria,4NECY@976|Bacteroidetes,2FMCA@200643|Bacteroidia,22W5B@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) aspS - 6.1.1.12 ko:K01876 ko00970,map00970 M00359,M00360 R05577 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 - - - GAD,tRNA-synt_2,tRNA_anti-codon LIIFOLDO_03237 435591.BDI_1401 4.36e-264 723.0 COG0327@1|root,COG0327@2|Bacteria,4NF51@976|Bacteroidetes,2FMW2@200643|Bacteroidia,22WCX@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the GTP cyclohydrolase I type 2 NIF3 family yqfO - - - - - - - - - - - NIF3 LIIFOLDO_03238 435591.BDI_1400 2.61e-120 350.0 COG1579@1|root,COG1579@2|Bacteria,4NE36@976|Bacteroidetes,2FPGP@200643|Bacteroidia,22W5K@171551|Porphyromonadaceae 976|Bacteroidetes S Zinc ribbon domain protein - - - ko:K07164 - - - - ko00000 - - - zf-RING_7 LIIFOLDO_03239 435591.BDI_1399 0.0 880.0 COG0037@1|root,COG0037@2|Bacteria,4NEJS@976|Bacteroidetes,2FP2A@200643|Bacteroidia,22X8C@171551|Porphyromonadaceae 976|Bacteroidetes D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine tilS - 6.3.4.19 ko:K04075 - - R09597 RC02633,RC02634 ko00000,ko01000,ko03016 - - - ATP_bind_3,TilS_C LIIFOLDO_03241 435591.BDI_1708 0.0 1045.0 COG0488@1|root,COG0488@2|Bacteria,4NG1W@976|Bacteroidetes,2FMY5@200643|Bacteroidia,22W6R@171551|Porphyromonadaceae 976|Bacteroidetes S glycosyl transferase family 2 - - - ko:K06158 - - - - ko00000,ko03012 - - - ABC_tran,ABC_tran_Xtn LIIFOLDO_03242 435591.BDI_1707 0.0 1025.0 COG3637@1|root,COG3637@2|Bacteria,4NH6A@976|Bacteroidetes,2FQ24@200643|Bacteroidia,22WF3@171551|Porphyromonadaceae 976|Bacteroidetes M Domain of unknown function (DUF3943) - - - - - - - - - - - - DUF3943 LIIFOLDO_03243 435591.BDI_1706 2.83e-138 391.0 COG2860@1|root,COG2860@2|Bacteria,4NEXS@976|Bacteroidetes,2FMPZ@200643|Bacteroidia,22W41@171551|Porphyromonadaceae 976|Bacteroidetes S membrane yadS - - - - - - - - - - - UPF0126 LIIFOLDO_03244 435591.BDI_1705 9.78e-261 714.0 COG0252@1|root,COG0252@2|Bacteria,4NE2Z@976|Bacteroidetes,2FM3E@200643|Bacteroidia,22VV2@171551|Porphyromonadaceae 976|Bacteroidetes EJ L-asparaginase, type I ansA - 3.5.1.1 ko:K01424 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 - R00485 RC00010,RC02798 ko00000,ko00001,ko01000 - - - Asparaginase LIIFOLDO_03245 435591.BDI_1704 6.68e-196 542.0 COG1235@1|root,COG1235@2|Bacteria,4NDVI@976|Bacteroidetes,2FN8Y@200643|Bacteroidia,22WMP@171551|Porphyromonadaceae 976|Bacteroidetes S metallo-beta-lactamase vicX - - - - - - - - - - - Lactamase_B,Lactamase_B_2 LIIFOLDO_03247 435591.BDI_2587 1.07e-146 415.0 COG1346@1|root,COG1346@2|Bacteria,4NM6T@976|Bacteroidetes,2FMZ5@200643|Bacteroidia,22X7K@171551|Porphyromonadaceae 976|Bacteroidetes M TIGR00659 family lrgB - - - - - - - - - - - LrgB LIIFOLDO_03248 435591.BDI_2586 1.36e-58 182.0 COG1380@1|root,COG1380@2|Bacteria,4NSK7@976|Bacteroidetes,2FU8X@200643|Bacteroidia,22YED@171551|Porphyromonadaceae 976|Bacteroidetes S Murein hydrolase - - - ko:K06518 - - - - ko00000,ko02000 1.E.14.2 - - LrgA LIIFOLDO_03249 435591.BDI_2585 7.28e-289 793.0 COG2239@1|root,COG2239@2|Bacteria,4NGGN@976|Bacteroidetes,2FN1M@200643|Bacteroidia,22WIG@171551|Porphyromonadaceae 976|Bacteroidetes P Acts as a magnesium transporter mgtE - - ko:K06213 - - - - ko00000,ko02000 1.A.26.1 - - CBS,MgtE,MgtE_N LIIFOLDO_03250 435591.BDI_2584 4.68e-191 530.0 COG0030@1|root,COG0030@2|Bacteria,4NERB@976|Bacteroidetes,2FMH1@200643|Bacteroidia,22WN1@171551|Porphyromonadaceae 976|Bacteroidetes J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits ksgA GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 ko:K02528 - - R10716 RC00003,RC03257 ko00000,ko01000,ko03009 - - - RrnaAD LIIFOLDO_03251 435591.BDI_2583 7.47e-235 647.0 COG0392@1|root,COG0392@2|Bacteria,4NGPD@976|Bacteroidetes,2FP5P@200643|Bacteroidia,22WY0@171551|Porphyromonadaceae 976|Bacteroidetes S Lysylphosphatidylglycerol synthase TM region - - - ko:K07027 - - - - ko00000,ko02000 4.D.2 - - LPG_synthase_TM LIIFOLDO_03252 435591.BDI_2582 0.0 969.0 COG2195@1|root,COG2195@2|Bacteria,4NG8I@976|Bacteroidetes,2FM0V@200643|Bacteroidia,22WW0@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the hydrolysis of Xaa-His dipeptides - - - ko:K01270 ko00480,ko01100,map00480,map01100 - R00899,R04951 RC00096,RC00141 ko00000,ko00001,ko01000,ko01002 - - - M20_dimer,Peptidase_M20,Peptidase_M28 LIIFOLDO_03254 435591.BDI_3777 2.88e-220 608.0 COG0462@1|root,COG0462@2|Bacteria,4NEVF@976|Bacteroidetes,2FPH1@200643|Bacteroidia,22WNU@171551|Porphyromonadaceae 976|Bacteroidetes F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) prs - 2.7.6.1 ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 M00005 R01049 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 - - - Pribosyl_synth,Pribosyltran_N LIIFOLDO_03255 435591.BDI_3778 1.26e-273 746.0 COG0482@1|root,COG0482@2|Bacteria,4NFXZ@976|Bacteroidetes,2FPBU@200643|Bacteroidia,22W20@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 trmU - 2.8.1.13 ko:K00566 ko04122,map04122 - R08700 RC02313,RC02315 ko00000,ko00001,ko01000,ko03016 - - - tRNA_Me_trans LIIFOLDO_03256 435591.BDI_3779 0.0 1355.0 COG0457@1|root,COG0457@2|Bacteria,4NFIY@976|Bacteroidetes,2FMXX@200643|Bacteroidia,22WNA@171551|Porphyromonadaceae 976|Bacteroidetes S Peptidase family M49 - - 3.4.14.4 ko:K01277 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M49 LIIFOLDO_03257 435591.BDI_3780 1.69e-162 455.0 COG4912@1|root,COG4912@2|Bacteria,4NUAZ@976|Bacteroidetes,2FQ8F@200643|Bacteroidia,22YEE@171551|Porphyromonadaceae 976|Bacteroidetes L DNA alkylation repair enzyme - - - - - - - - - - - - DNA_alkylation LIIFOLDO_03258 435591.BDI_3781 2.11e-102 296.0 COG0735@1|root,COG0735@2|Bacteria,4NM8S@976|Bacteroidetes,2FN4T@200643|Bacteroidia,22Y5G@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the Fur family fur - - ko:K03711 - - - - ko00000,ko03000 - - - FUR LIIFOLDO_03259 435591.BDI_3721 4.09e-96 280.0 COG2259@1|root,COG2259@2|Bacteria,4NSBJ@976|Bacteroidetes,2FSQZ@200643|Bacteroidia,22YE6@171551|Porphyromonadaceae 976|Bacteroidetes S DoxX - - - ko:K15977 - - - - ko00000 - - - DoxX LIIFOLDO_03262 435591.BDI_3725 0.0 882.0 COG0015@1|root,COG0015@2|Bacteria,4NFY8@976|Bacteroidetes,2FMYF@200643|Bacteroidia,22X1N@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily purB - 4.3.2.2 ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048,M00049 R01083,R04559 RC00379,RC00444,RC00445 ko00000,ko00001,ko00002,ko01000 - - - ADSL_C,ASL_C,Lyase_1 LIIFOLDO_03263 435591.BDI_3726 2.24e-258 719.0 COG1187@1|root,COG1187@2|Bacteria,4NEE1@976|Bacteroidetes,2FP7M@200643|Bacteroidia,22WKX@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the pseudouridine synthase RsuA family rluB - 5.4.99.22 ko:K06178 - - - - ko00000,ko01000,ko03009 - - - PseudoU_synth_2,S4 LIIFOLDO_03264 435591.BDI_3727 0.0 947.0 COG0017@1|root,COG0017@2|Bacteria,4NDY4@976|Bacteroidetes,2FKYI@200643|Bacteroidia,22XA5@171551|Porphyromonadaceae 976|Bacteroidetes J Asparaginyl-tRNA synthetase asnS - 6.1.1.22 ko:K01893 ko00970,map00970 M00359,M00360 R03648 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - tRNA-synt_2,tRNA_anti-codon LIIFOLDO_03265 435591.BDI_3728 5.04e-109 313.0 COG1522@1|root,COG1522@2|Bacteria,4NMEN@976|Bacteroidetes,2FPN5@200643|Bacteroidia,22XMV@171551|Porphyromonadaceae 976|Bacteroidetes K Transcriptional regulator asnC - - ko:K03718 - - - - ko00000,ko03000 - - - AsnC_trans_reg,HTH_24,HTH_AsnC-type LIIFOLDO_03268 435591.BDI_2763 7.18e-317 875.0 COG0457@1|root,COG0457@2|Bacteria,4P8Z4@976|Bacteroidetes,2FP7A@200643|Bacteroidia 976|Bacteroidetes S Tetratricopeptide repeat - - - - - - - - - - - - TPR_12,TPR_8 LIIFOLDO_03269 435591.BDI_2764 6.44e-301 823.0 COG1373@1|root,COG1373@2|Bacteria,4NE3E@976|Bacteroidetes,2FP33@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - ko:K07133 - - - - ko00000 - - - AAA_14 LIIFOLDO_03270 435591.BDI_2765 0.0 1105.0 COG1838@1|root,COG1951@1|root,COG1838@2|Bacteria,COG1951@2|Bacteria,4NE85@976|Bacteroidetes,2FNPE@200643|Bacteroidia,22WPF@171551|Porphyromonadaceae 976|Bacteroidetes C Catalyzes the reversible hydration of fumarate to (S)- malate fumB - 4.2.1.2 ko:K01676 ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00173,M00374 R01082 RC00443 ko00000,ko00001,ko00002,ko01000 - - - Fumerase,Fumerase_C LIIFOLDO_03271 435591.BDI_1037 1.57e-194 539.0 COG0631@1|root,COG0631@2|Bacteria,4NPJV@976|Bacteroidetes,2FT2U@200643|Bacteroidia,2317P@171551|Porphyromonadaceae 976|Bacteroidetes T Serine/threonine phosphatases, family 2C, catalytic domain - - 3.1.3.16 ko:K20074 - - - - ko00000,ko01000,ko01009 - - - PP2C_2 LIIFOLDO_03272 435591.BDI_1036 1.2e-121 347.0 COG1716@1|root,COG1716@2|Bacteria,4NU70@976|Bacteroidetes,2FW38@200643|Bacteroidia,231D9@171551|Porphyromonadaceae 976|Bacteroidetes T FHA domain - - - - - - - - - - - - FHA LIIFOLDO_03274 435591.BDI_1034 8.77e-158 442.0 COG1716@1|root,COG1716@2|Bacteria,4NVZX@976|Bacteroidetes,2FVZR@200643|Bacteroidia,23024@171551|Porphyromonadaceae 976|Bacteroidetes T Inner membrane component of T3SS, cytoplasmic domain - - - - - - - - - - - - FHA LIIFOLDO_03275 435591.BDI_1033 1.89e-82 244.0 COG3279@1|root,COG3279@2|Bacteria,4NZ6I@976|Bacteroidetes,2FUMY@200643|Bacteroidia,22YXF@171551|Porphyromonadaceae 976|Bacteroidetes K LytTr DNA-binding domain - - - - - - - - - - - - LytTR LIIFOLDO_03276 435591.BDI_1032 2.61e-260 713.0 COG0642@1|root,COG2205@2|Bacteria,4NG0Y@976|Bacteroidetes,2G2UQ@200643|Bacteroidia 976|Bacteroidetes T Psort location CytoplasmicMembrane, score 7.88 - - - - - - - - - - - - HATPase_c,HisKA,PAS_3,PAS_9 LIIFOLDO_03277 435591.BDI_1836 2.11e-56 192.0 COG1086@1|root,COG1086@2|Bacteria,4NERY@976|Bacteroidetes,2FMAA@200643|Bacteroidia,22WNH@171551|Porphyromonadaceae 976|Bacteroidetes GM Polysaccharide biosynthesis protein cap5D - - - - - - - - - - - CoA_binding_3,Polysacc_synt_2 LIIFOLDO_03278 435591.BDI_1835 0.0 2086.0 COG2982@1|root,COG2982@2|Bacteria,4NEJQ@976|Bacteroidetes,2FN9V@200643|Bacteroidia,22WNN@171551|Porphyromonadaceae 976|Bacteroidetes M AsmA-like C-terminal region - - - - - - - - - - - - AsmA,AsmA_2 LIIFOLDO_03279 435591.BDI_1834 2.63e-288 785.0 COG1088@1|root,COG1088@2|Bacteria,4NE9V@976|Bacteroidetes,2FMUH@200643|Bacteroidia,22W2K@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily rfbB - 4.2.1.46 ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 M00793 R06513 RC00402 ko00000,ko00001,ko00002,ko01000 - - - GDP_Man_Dehyd LIIFOLDO_03280 435591.BDI_1833 5.41e-134 379.0 COG1898@1|root,COG1898@2|Bacteria,4NNKW@976|Bacteroidetes,2FMBP@200643|Bacteroidia,22XD8@171551|Porphyromonadaceae 976|Bacteroidetes M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose rfbC - 5.1.3.13 ko:K01790 ko00521,ko00523,ko01130,map00521,map00523,map01130 M00793 R06514 RC01531 ko00000,ko00001,ko00002,ko01000 - - - dTDP_sugar_isom LIIFOLDO_03282 435591.BDI_3425 0.0 2110.0 COG0458@1|root,COG0458@2|Bacteria,4NEQ0@976|Bacteroidetes,2FMKD@200643|Bacteroidia,22X6E@171551|Porphyromonadaceae 976|Bacteroidetes EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain carB - 6.3.5.5 ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 - - - CPSase_L_D2,CPSase_L_D3,MGS LIIFOLDO_03283 435591.BDI_3424 0.0 1384.0 COG2825@1|root,COG2825@2|Bacteria,4PMUJ@976|Bacteroidetes,2G0GN@200643|Bacteroidia,22X9J@171551|Porphyromonadaceae 976|Bacteroidetes M helix_turn_helix, Lux Regulon - - - - - - - - - - - - Y_Y_Y LIIFOLDO_03284 435591.BDI_1126 2.96e-316 860.0 28HE2@1|root,2Z7QJ@2|Bacteria,4NFBA@976|Bacteroidetes,2FMTF@200643|Bacteroidia,22W43@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF5103) - - - - - - - - - - - - DUF5103 LIIFOLDO_03285 435591.BDI_1127 2.46e-221 611.0 COG0348@1|root,COG0348@2|Bacteria,4NN2H@976|Bacteroidetes,2FSAA@200643|Bacteroidia,22XSN@171551|Porphyromonadaceae 976|Bacteroidetes C 4Fe-4S binding domain - - - - - - - - - - - - Fer4_5 LIIFOLDO_03286 435591.BDI_1128 0.0 905.0 COG0402@1|root,COG0402@2|Bacteria,4NKZV@976|Bacteroidetes,2G2FQ@200643|Bacteroidia 976|Bacteroidetes F Amidohydrolase family guaD - 3.5.4.3 ko:K01487 ko00230,ko01100,map00230,map01100 - R01676 RC00204 ko00000,ko00001,ko01000 - - - Amidohydro_1 LIIFOLDO_03287 435591.BDI_1129 4.4e-201 558.0 COG0053@1|root,COG0053@2|Bacteria,4NEID@976|Bacteroidetes,2FNNF@200643|Bacteroidia,22XFZ@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family fieF - - - - - - - - - - - Cation_efflux,ZT_dimer LIIFOLDO_03288 435591.BDI_1130 1.83e-183 518.0 COG3681@1|root,COG3681@2|Bacteria,4NHRU@976|Bacteroidetes,2FNP9@200643|Bacteroidia,22WFW@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the UPF0597 family - - - - - - - - - - - - SDH_alpha LIIFOLDO_03289 435591.BDI_2267 3.53e-160 449.0 COG0081@1|root,COG0081@2|Bacteria,4NEIC@976|Bacteroidetes,2FNKI@200643|Bacteroidia,22X02@171551|Porphyromonadaceae 976|Bacteroidetes J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release rplA GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02863 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L1 LIIFOLDO_03290 435591.BDI_2266 2.21e-115 331.0 COG0244@1|root,COG0244@2|Bacteria,4NFFK@976|Bacteroidetes,2FSBB@200643|Bacteroidia,22XXG@171551|Porphyromonadaceae 976|Bacteroidetes J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors rplJ - - ko:K02864 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L10 LIIFOLDO_03291 435591.BDI_2265 2.57e-60 188.0 COG0222@1|root,COG0222@2|Bacteria,4NQAQ@976|Bacteroidetes,2FSJH@200643|Bacteroidia,22Y4T@171551|Porphyromonadaceae 976|Bacteroidetes J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation rplL - - ko:K02935 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L12,Ribosomal_L12_N LIIFOLDO_03292 435591.BDI_1360 0.0 994.0 COG1492@1|root,COG1492@2|Bacteria,4NG0W@976|Bacteroidetes,2G2ZS@200643|Bacteroidia,22X6B@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation cobQ - 6.3.5.10 ko:K02232 ko00860,ko01100,map00860,map01100 M00122 R05225 RC00010,RC01302 ko00000,ko00001,ko00002,ko01000 - - - AAA_26,CbiA,GATase_3 LIIFOLDO_03293 435591.BDI_1361 0.0 934.0 COG0673@1|root,COG0673@2|Bacteria,4NDYI@976|Bacteroidetes,2G2S3@200643|Bacteroidia,22ZN4@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA,GFO_IDH_MocA_C,TAT_signal LIIFOLDO_03294 435591.BDI_1362 1.12e-116 334.0 COG2406@1|root,COG2406@2|Bacteria,4NMDH@976|Bacteroidetes,2FPCS@200643|Bacteroidia,22XRC@171551|Porphyromonadaceae 976|Bacteroidetes S Ferritin-like domain - - 1.16.3.1 ko:K03594 ko00860,map00860 - R00078 RC02758 ko00000,ko00001,ko01000 - - - Ferritin LIIFOLDO_03295 435591.BDI_1363 9.65e-135 381.0 COG0693@1|root,COG0693@2|Bacteria,4NPUE@976|Bacteroidetes,2FMXF@200643|Bacteroidia,22Y7F@171551|Porphyromonadaceae 976|Bacteroidetes S biosynthesis protein ThiJ thiJ - 3.5.1.124 ko:K03152 - - - - ko00000,ko01000,ko01002 - - - DJ-1_PfpI LIIFOLDO_03296 435591.BDI_1364 8.72e-211 586.0 COG0642@1|root,COG2205@2|Bacteria,4NDXU@976|Bacteroidetes,2FM06@200643|Bacteroidia,22XHH@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase-like ATPases - - - - - - - - - - - - GAF,HATPase_c,HisKA,Hpt,PAS,PAS_3,PAS_4,PAS_9,Response_reg LIIFOLDO_03297 1122931.AUAE01000011_gene1730 7.22e-62 210.0 COG0085@1|root,COG0085@2|Bacteria,4NF8D@976|Bacteroidetes,2FMDI@200643|Bacteroidia,22X4R@171551|Porphyromonadaceae 976|Bacteroidetes K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates rpoB - 2.7.7.6 ko:K03043 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 - - - RNA_pol_Rpb2_1,RNA_pol_Rpb2_2,RNA_pol_Rpb2_3,RNA_pol_Rpb2_45,RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 LIIFOLDO_03298 435591.BDI_2263 0.0 2776.0 COG0086@1|root,COG0086@2|Bacteria,4NEMW@976|Bacteroidetes,2FMWR@200643|Bacteroidia,22VWB@171551|Porphyromonadaceae 976|Bacteroidetes K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates rpoC GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 ko:K03046 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 - - - RNA_pol_Rpb1_1,RNA_pol_Rpb1_2,RNA_pol_Rpb1_3,RNA_pol_Rpb1_4,RNA_pol_Rpb1_5 LIIFOLDO_03299 435591.BDI_2262 1.42e-65 206.0 COG3568@1|root,COG3568@2|Bacteria,4NHXV@976|Bacteroidetes,2FNR3@200643|Bacteroidia,22X95@171551|Porphyromonadaceae 976|Bacteroidetes S Endonuclease/Exonuclease/phosphatase family - - - - - - - - - - - - Exo_endo_phos LIIFOLDO_03300 435591.BDI_1589 2.57e-133 377.0 2F1VS@1|root,33UVK@2|Bacteria,4PMFX@976|Bacteroidetes,2FPZ8@200643|Bacteroidia 976|Bacteroidetes S VirE N-terminal domain - - - - - - - - - - - - VirE_N LIIFOLDO_03301 435591.BDI_1588 1.75e-100 291.0 2DUR1@1|root,33RU4@2|Bacteria,4P0MW@976|Bacteroidetes,2FX4N@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_03302 435591.BDI_1587 1.02e-59 185.0 COG1669@1|root,COG1669@2|Bacteria,4NVCI@976|Bacteroidetes,2FT93@200643|Bacteroidia,22YPB@171551|Porphyromonadaceae 976|Bacteroidetes S Nucleotidyltransferase domain - - - ko:K07075 - - - - ko00000 - - - NTP_transf_2 LIIFOLDO_03303 435591.BDI_1586 2.72e-70 212.0 COG2361@1|root,COG2361@2|Bacteria,4NTXJ@976|Bacteroidetes,2FTWU@200643|Bacteroidia,230SU@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function DUF86 - - - - - - - - - - - - DUF86 LIIFOLDO_03304 435591.BDI_1585 0.0 921.0 COG2244@1|root,COG2244@2|Bacteria,4NHVU@976|Bacteroidetes,2FNNQ@200643|Bacteroidia,22VX9@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - - LIIFOLDO_03305 435591.BDI_1549 6.32e-122 348.0 COG0693@1|root,COG0693@2|Bacteria,4NQI1@976|Bacteroidetes,2G38B@200643|Bacteroidia,2320Q@171551|Porphyromonadaceae 976|Bacteroidetes S Thiamine biosynthesis protein ThiJ yajL - 3.5.1.124 ko:K03152 - - - - ko00000,ko01000,ko01002 - - - DJ-1_PfpI LIIFOLDO_03306 435591.BDI_1550 1.48e-260 714.0 COG3049@1|root,COG3049@2|Bacteria,4NK0D@976|Bacteroidetes,2G2FC@200643|Bacteroidia,22WFY@171551|Porphyromonadaceae 976|Bacteroidetes M Linear amide C-N hydrolases, choloylglycine hydrolase family - - 3.5.1.24 ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 - R02797,R03975,R03977,R04486,R04487,R05835 RC00090,RC00096 ko00000,ko00001,ko01000 - - - CBAH LIIFOLDO_03307 1121094.KB894650_gene2439 1.07e-15 77.0 COG1028@1|root,COG1028@2|Bacteria,4NEUB@976|Bacteroidetes,2FQHC@200643|Bacteroidia,4AMH0@815|Bacteroidaceae 976|Bacteroidetes IQ Oxidoreductase, short chain dehydrogenase reductase family protein - - 1.1.1.159,1.3.1.25 ko:K00076,ko:K05783 ko00121,ko00362,ko00364,ko00622,ko01100,ko01120,ko01220,map00121,map00362,map00364,map00622,map01100,map01120,map01220 M00551 R00813,R05292,R05293,R05309,R05314,R08111,R08112,R08113 RC00271,RC01326,RC01327 br01602,ko00000,ko00001,ko00002,ko01000 - - - adh_short_C2 LIIFOLDO_03308 435591.BDI_1552 5.06e-208 577.0 COG0697@1|root,COG0697@2|Bacteria,4NK8U@976|Bacteroidetes,2FNMF@200643|Bacteroidia,22X8B@171551|Porphyromonadaceae 976|Bacteroidetes EG Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - EamA LIIFOLDO_03309 435591.BDI_1553 2e-207 574.0 COG1575@1|root,COG1575@2|Bacteria,4NGCJ@976|Bacteroidetes,2FMMX@200643|Bacteroidia,22XUQ@171551|Porphyromonadaceae 976|Bacteroidetes H Belongs to the MenA family. Type 1 subfamily menA - 2.5.1.74 ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R05617,R06858,R10757 RC02935,RC02936,RC03264 ko00000,ko00001,ko00002,ko01000,ko01006 - - - UbiA LIIFOLDO_03311 435591.BDI_2770 4.82e-55 172.0 COG0184@1|root,COG0184@2|Bacteria,4NS7U@976|Bacteroidetes,2FTTZ@200643|Bacteroidia,22YD7@171551|Porphyromonadaceae 976|Bacteroidetes J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome rpsO GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - ko:K02956 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S15 LIIFOLDO_03312 435591.BDI_2771 2.45e-134 380.0 COG1396@1|root,COG1917@1|root,COG1396@2|Bacteria,COG1917@2|Bacteria,4NN23@976|Bacteroidetes,2FN1Y@200643|Bacteroidia,22XT7@171551|Porphyromonadaceae 976|Bacteroidetes K Helix-turn-helix domain - - - - - - - - - - - - Cupin_2,HTH_19,HTH_3 LIIFOLDO_03313 435591.BDI_2772 0.0 1136.0 COG0318@1|root,COG0318@2|Bacteria,4NFPF@976|Bacteroidetes,2FMTR@200643|Bacteroidia,22W6H@171551|Porphyromonadaceae 976|Bacteroidetes IQ AMP-binding enzyme C-terminal domain - - - ko:K00666 - - - - ko00000,ko01000,ko01004 - - - AMP-binding,AMP-binding_C LIIFOLDO_03314 435591.BDI_2773 5.3e-200 553.0 COG2207@1|root,COG2207@2|Bacteria,4NGWC@976|Bacteroidetes,2FNH8@200643|Bacteroidia,22XKU@171551|Porphyromonadaceae 976|Bacteroidetes K AraC family transcriptional regulator - - - - - - - - - - - - AraC_binding,HTH_18 LIIFOLDO_03315 357276.EL88_12450 8.07e-157 442.0 COG1028@1|root,COG1028@2|Bacteria,4NGQY@976|Bacteroidetes,2FMZ0@200643|Bacteroidia,4AQ7C@815|Bacteroidaceae 976|Bacteroidetes IQ KR domain - - - - - - - - - - - - adh_short_C2 LIIFOLDO_03316 435591.BDI_1595 0.0 1262.0 COG0489@1|root,COG3206@1|root,COG0489@2|Bacteria,COG3206@2|Bacteria,4NEXU@976|Bacteroidetes,2FM9K@200643|Bacteroidia,22WE9@171551|Porphyromonadaceae 976|Bacteroidetes DM Chain length determinant protein ptk_3 - - - - - - - - - - - AAA_31,CbiA,GNVR,Wzz LIIFOLDO_03317 484018.BACPLE_01167 1.15e-188 527.0 COG1209@1|root,COG1209@2|Bacteria,4NE1U@976|Bacteroidetes,2FNUA@200643|Bacteroidia,4AM2G@815|Bacteroidaceae 976|Bacteroidetes H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis rmlA - 2.7.7.24 ko:K00973 ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130 M00793 R02328 RC00002 ko00000,ko00001,ko00002,ko01000 - - - NTP_transferase LIIFOLDO_03318 1410608.JNKX01000012_gene456 2.23e-259 712.0 COG1088@1|root,COG1088@2|Bacteria,4NE9V@976|Bacteroidetes,2FMUH@200643|Bacteroidia,4AME0@815|Bacteroidaceae 976|Bacteroidetes M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily rfbB - 4.2.1.46 ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 M00793 R06513 RC00402 ko00000,ko00001,ko00002,ko01000 - - - GDP_Man_Dehyd LIIFOLDO_03319 435591.BDI_1190 5.88e-93 273.0 2E8SV@1|root,3333M@2|Bacteria,4NSHV@976|Bacteroidetes,2FV1F@200643|Bacteroidia,22YEX@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4293) - - - - - - - - - - - - DUF4293 LIIFOLDO_03320 435591.BDI_1191 5.01e-69 209.0 2CT4B@1|root,32SSJ@2|Bacteria,4NQ76@976|Bacteroidetes,2FTC9@200643|Bacteroidia,22Y4I@171551|Porphyromonadaceae 976|Bacteroidetes S Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits rpoZ - - - - - - - - - - - RNA_pol_Rpb6 LIIFOLDO_03321 435591.BDI_1192 6.61e-188 522.0 COG4105@1|root,COG4105@2|Bacteria,4NJ5A@976|Bacteroidetes,2FNAY@200643|Bacteroidia,22WG7@171551|Porphyromonadaceae 976|Bacteroidetes S outer membrane assembly lipoprotein YfiO yfiO - - ko:K05807 - - - - ko00000,ko02000 1.B.33.1 - - YfiO LIIFOLDO_03322 435591.BDI_1193 3.4e-93 272.0 COG4747@1|root,COG4747@2|Bacteria,4NQIW@976|Bacteroidetes,2FS2U@200643|Bacteroidia,22YBG@171551|Porphyromonadaceae 976|Bacteroidetes S ACT domain protein - - - - - - - - - - - - ACT LIIFOLDO_03323 435591.BDI_1194 0.0 873.0 COG1541@1|root,COG1541@2|Bacteria,4NGRR@976|Bacteroidetes,2FNC4@200643|Bacteroidia,22XDE@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) - - 6.2.1.30 ko:K01912 ko00360,ko01120,ko05111,map00360,map01120,map05111 - R02539 RC00004,RC00014 ko00000,ko00001,ko01000 - - - AMP-binding,AMP-binding_C_2 LIIFOLDO_03324 435591.BDI_1195 1.2e-199 552.0 COG2152@1|root,COG2152@2|Bacteria,4NGDZ@976|Bacteroidetes,2FP8T@200643|Bacteroidia 976|Bacteroidetes G Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080 LIIFOLDO_03325 435591.BDI_1124 1.25e-175 496.0 COG4658@1|root,COG4658@2|Bacteria,4NFGW@976|Bacteroidetes,2FMD0@200643|Bacteroidia,22W1H@171551|Porphyromonadaceae 976|Bacteroidetes C NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol nqrB - 1.6.5.8 ko:K00347 - - - - ko00000,ko01000 - - - NQR2_RnfD_RnfE LIIFOLDO_03326 435591.BDI_1123 1.83e-190 529.0 COG1592@1|root,COG2869@1|root,COG1592@2|Bacteria,COG2869@2|Bacteria,4NF7A@976|Bacteroidetes,2FMQM@200643|Bacteroidia,22XWP@171551|Porphyromonadaceae 976|Bacteroidetes C NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol nqrC - 1.6.5.8 ko:K00348 - - - - ko00000,ko01000 - - - FMN_bind LIIFOLDO_03327 435591.BDI_1122 6.09e-136 386.0 COG1347@1|root,COG1347@2|Bacteria,4NGD9@976|Bacteroidetes,2FN5K@200643|Bacteroidia,22VYS@171551|Porphyromonadaceae 976|Bacteroidetes C NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol nqrD - 1.6.5.8 ko:K00349 - - - - ko00000,ko01000 - - - Rnf-Nqr LIIFOLDO_03328 435591.BDI_1121 1.75e-133 379.0 COG2209@1|root,COG2209@2|Bacteria,4NEU0@976|Bacteroidetes,2FMW9@200643|Bacteroidia,22WBF@171551|Porphyromonadaceae 976|Bacteroidetes C NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol nqrE - 1.6.5.8 ko:K00350 - - - - ko00000,ko01000 - - - Rnf-Nqr LIIFOLDO_03329 435591.BDI_1120 0.0 868.0 COG2871@1|root,COG2871@2|Bacteria,4NFKC@976|Bacteroidetes,2FN44@200643|Bacteroidia,22WRI@171551|Porphyromonadaceae 976|Bacteroidetes C NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway nqrF - 1.6.5.8 ko:K00351 - - - - ko00000,ko01000 - - - FAD_binding_6,Fer2,NAD_binding_1 LIIFOLDO_03330 435591.BDI_2767 0.0 1004.0 COG3063@1|root,COG3063@2|Bacteria,4PKG6@976|Bacteroidetes,2G3G2@200643|Bacteroidia,2322F@171551|Porphyromonadaceae 976|Bacteroidetes NU Tetratricopeptide repeat protein - - - - - - - - - - - - TPR_16,TPR_2,TPR_8 LIIFOLDO_03331 435591.BDI_2766 0.0 1499.0 COG5640@1|root,COG5640@2|Bacteria,4PKEW@976|Bacteroidetes,2FRKU@200643|Bacteroidia,231HM@171551|Porphyromonadaceae 976|Bacteroidetes O Trypsin-like peptidase domain - - 3.4.21.50 ko:K01337 - - - - ko00000,ko01000,ko01002 - - - Trypsin_2 LIIFOLDO_03333 1120998.AUFC01000039_gene3011 4.29e-20 96.7 COG1361@1|root,COG5492@1|root,COG1361@2|Bacteria,COG5492@2|Bacteria,1UKMG@1239|Firmicutes,25FZ6@186801|Clostridia 186801|Clostridia N Conserved repeat domain - - - - - - - - - - - - - LIIFOLDO_03335 1158294.JOMI01000003_gene2718 4.06e-43 159.0 COG3292@1|root,COG3292@2|Bacteria,4NF78@976|Bacteroidetes,2FNQA@200643|Bacteroidia 976|Bacteroidetes T Domain of unknown function (DUF5074) - - - - - - - - - - - - DUF5074,PKD_3 LIIFOLDO_03336 445970.ALIPUT_00300 7.1e-63 199.0 COG5423@1|root,COG5423@2|Bacteria,4NSZ1@976|Bacteroidetes,2FMDP@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - DUF2284 LIIFOLDO_03337 1235803.C825_00599 0.0 967.0 COG1429@1|root,COG1429@2|Bacteria,4P0BG@976|Bacteroidetes,2FMJ7@200643|Bacteroidia 976|Bacteroidetes H COG NOG08812 non supervised orthologous group - - - - - - - - - - - - AAA-ATPase_like,PDDEXK_9 LIIFOLDO_03338 435591.BDI_2723 0.0 1047.0 2DUTV@1|root,33S7W@2|Bacteria,4P1VI@976|Bacteroidetes,2FWJJ@200643|Bacteroidia,22ZT0@171551|Porphyromonadaceae 435591.BDI_2723|- - - - - - - - - - - - - - - - LIIFOLDO_03339 435591.BDI_2769 0.0 1185.0 COG1217@1|root,COG1217@2|Bacteria,4NDVM@976|Bacteroidetes,2FMNU@200643|Bacteroidia,22WPR@171551|Porphyromonadaceae 976|Bacteroidetes T GTP-binding protein TypA typA - - ko:K06207 - - - - ko00000 - - - EFG_C,GTP_EFTU,GTP_EFTU_D2 LIIFOLDO_03340 435591.BDI_2768 0.0 1005.0 COG3391@1|root,COG3391@2|Bacteria,4NI6H@976|Bacteroidetes,2FR3J@200643|Bacteroidia 976|Bacteroidetes S COG NOG28036 non supervised orthologous group - - - - - - - - - - - - DUF4114,DUF4842 LIIFOLDO_03341 435591.BDI_2768 1.18e-51 177.0 COG3391@1|root,COG3391@2|Bacteria,4NI6H@976|Bacteroidetes,2FR3J@200643|Bacteroidia 976|Bacteroidetes S COG NOG28036 non supervised orthologous group - - - - - - - - - - - - DUF4114,DUF4842 LIIFOLDO_03343 435591.BDI_2016 2.55e-142 401.0 COG0118@1|root,COG0118@2|Bacteria,4NF4J@976|Bacteroidetes,2FPAY@200643|Bacteroidia,22XFN@171551|Porphyromonadaceae 976|Bacteroidetes E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR hisH - - ko:K02501 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04558 RC00010,RC01190,RC01943 ko00000,ko00001,ko00002,ko01000 - - - GATase LIIFOLDO_03344 435591.BDI_2017 2.13e-169 473.0 COG0106@1|root,COG0106@2|Bacteria,4NEEX@976|Bacteroidetes,2FMBX@200643|Bacteroidia,22WHU@171551|Porphyromonadaceae 976|Bacteroidetes E Histidine biosynthesis protein hisA GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 ko:K01814 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04640 RC00945 ko00000,ko00001,ko00002,ko01000 - - - His_biosynth LIIFOLDO_03345 435591.BDI_2018 1.33e-178 497.0 COG0107@1|root,COG0107@2|Bacteria,4NE16@976|Bacteroidetes,2FNY2@200643|Bacteroidia,22WRH@171551|Porphyromonadaceae 976|Bacteroidetes E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit hisF GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - ko:K02500 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04558 RC00010,RC01190,RC01943 ko00000,ko00001,ko00002,ko01000 - - - His_biosynth LIIFOLDO_03346 435591.BDI_2019 1.65e-139 394.0 COG0139@1|root,COG0140@1|root,COG0139@2|Bacteria,COG0140@2|Bacteria,4NERE@976|Bacteroidetes,2FKYQ@200643|Bacteroidia,22WHQ@171551|Porphyromonadaceae 976|Bacteroidetes E Histidine biosynthesis bifunctional protein hisIE hisI - 3.5.4.19,3.6.1.31 ko:K11755 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04035,R04037 RC00002,RC01055 ko00000,ko00001,ko00002,ko01000 - - - PRA-CH,PRA-PH LIIFOLDO_03347 435591.BDI_2020 1.38e-159 447.0 COG2884@1|root,COG2884@2|Bacteria,4NEP2@976|Bacteroidetes,2FMNR@200643|Bacteroidia,22W1P@171551|Porphyromonadaceae 976|Bacteroidetes D ABC transporter, ATP-binding protein ftsE - - ko:K09812 ko02010,map02010 M00256 - - ko00000,ko00001,ko00002,ko02000,ko03036 3.A.1.140 - - ABC_tran LIIFOLDO_03348 435591.BDI_0368 3.4e-229 630.0 COG0657@1|root,COG0657@2|Bacteria,4NH62@976|Bacteroidetes,2FRBT@200643|Bacteroidia,22XBQ@171551|Porphyromonadaceae 976|Bacteroidetes I alpha/beta hydrolase fold - - - - - - - - - - - - Abhydrolase_3,Peptidase_S9 LIIFOLDO_03349 435591.BDI_0369 0.0 1524.0 COG1472@1|root,COG1472@2|Bacteria,4NE90@976|Bacteroidetes,2FMCU@200643|Bacteroidia,22WBP@171551|Porphyromonadaceae 976|Bacteroidetes G Fibronectin type III-like domain bglX - 3.2.1.21 ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 - R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040 RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248 ko00000,ko00001,ko01000 - GH3 - Fn3-like,Glyco_hydro_3,Glyco_hydro_3_C LIIFOLDO_03350 435591.BDI_3378 0.0 891.0 COG0232@1|root,COG0232@2|Bacteria,4NENM@976|Bacteroidetes,2FP36@200643|Bacteroidia,22X6H@171551|Porphyromonadaceae 976|Bacteroidetes F Dehydrogenase dgt - 3.1.5.1 ko:K01129 ko00230,map00230 - R01856 RC00017 ko00000,ko00001,ko01000 - - - HD,HD_assoc LIIFOLDO_03351 435591.BDI_3377 4.11e-223 615.0 COG1162@1|root,COG1162@2|Bacteria,4NE5H@976|Bacteroidetes,2FNY9@200643|Bacteroidia,22WRP@171551|Porphyromonadaceae 976|Bacteroidetes S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit rsgA - 3.1.3.100 ko:K06949 ko00730,ko01100,map00730,map01100 - R00615,R02135 RC00002,RC00017 ko00000,ko00001,ko01000,ko03009 - - - RsgA_GTPase,RsgA_N LIIFOLDO_03352 435591.BDI_3376 2.98e-123 352.0 COG0233@1|root,COG0233@2|Bacteria,4NF95@976|Bacteroidetes,2FPZE@200643|Bacteroidia,22XNM@171551|Porphyromonadaceae 976|Bacteroidetes J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another frr GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - ko:K02838 - - - - ko00000,ko03012 - - - RRF LIIFOLDO_03353 435591.BDI_3375 4.48e-57 187.0 COG0738@1|root,COG0738@2|Bacteria,4NEB2@976|Bacteroidetes,2FMUT@200643|Bacteroidia,22VVA@171551|Porphyromonadaceae 976|Bacteroidetes G Major Facilitator - - - - - - - - - - - - MFS_1 LIIFOLDO_03354 435591.BDI_2523 0.0 2078.0 COG1629@1|root,COG4773@1|root,COG1629@2|Bacteria,COG4773@2|Bacteria,4NDXS@976|Bacteroidetes,2G0KF@200643|Bacteroidia,22XIH@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec LIIFOLDO_03355 470145.BACCOP_01579 2.42e-26 107.0 2ARP4@1|root,31GZX@2|Bacteria,4PJXX@976|Bacteroidetes,2FTE6@200643|Bacteroidia,4ARNY@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_03357 411477.PARMER_02147 3.57e-61 196.0 2CC7R@1|root,334IS@2|Bacteria,4NX6W@976|Bacteroidetes,2FVDG@200643|Bacteroidia,231B8@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4469) with IG-like fold - - - - - - - - - - - - DUF4469,HU-DNA_bdg LIIFOLDO_03358 435591.BDI_1731 3.08e-37 136.0 COG0642@1|root,COG2205@2|Bacteria,4NKBC@976|Bacteroidetes,2FNE0@200643|Bacteroidia,22WMG@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase-like ATPases - - - - - - - - - - - - HATPase_c,HisKA LIIFOLDO_03359 435591.BDI_1731 7.16e-212 590.0 COG0642@1|root,COG2205@2|Bacteria,4NKBC@976|Bacteroidetes,2FNE0@200643|Bacteroidia,22WMG@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase-like ATPases - - - - - - - - - - - - HATPase_c,HisKA LIIFOLDO_03360 435591.BDI_0549 4.97e-75 225.0 2ESVK@1|root,33KDZ@2|Bacteria,4NZHI@976|Bacteroidetes,2FV4U@200643|Bacteroidia,230TB@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_03361 1235803.C825_04216 3.05e-109 325.0 COG1004@1|root,COG1004@2|Bacteria,4NE00@976|Bacteroidetes,2FMZ9@200643|Bacteroidia,22X7B@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the UDP-glucose GDP-mannose dehydrogenase family - - 1.1.1.22 ko:K00012 ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100 M00014,M00129,M00361,M00362 R00286 RC00291 ko00000,ko00001,ko00002,ko01000 - - - UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N LIIFOLDO_03362 1235803.C825_04216 3.77e-139 403.0 COG1004@1|root,COG1004@2|Bacteria,4NE00@976|Bacteroidetes,2FMZ9@200643|Bacteroidia,22X7B@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the UDP-glucose GDP-mannose dehydrogenase family - - 1.1.1.22 ko:K00012 ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100 M00014,M00129,M00361,M00362 R00286 RC00291 ko00000,ko00001,ko00002,ko01000 - - - UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N LIIFOLDO_03363 1235803.C825_04217 8.29e-226 630.0 COG2244@1|root,COG2244@2|Bacteria,4NFF1@976|Bacteroidetes,2FTXJ@200643|Bacteroidia,22YEA@171551|Porphyromonadaceae 976|Bacteroidetes S Polysaccharide biosynthesis protein - - - ko:K03328 - - - - ko00000 2.A.66.2 - - Polysacc_synt,Polysacc_synt_C LIIFOLDO_03364 435591.BDI_0128 1.1e-192 545.0 COG1086@1|root,COG1086@2|Bacteria,4NERY@976|Bacteroidetes,2FMAA@200643|Bacteroidia,22WNH@171551|Porphyromonadaceae 976|Bacteroidetes GM Polysaccharide biosynthesis protein cap5D - - - - - - - - - - - CoA_binding_3,Polysacc_synt_2 LIIFOLDO_03367 435591.BDI_0131 4.75e-96 280.0 COG0776@1|root,COG0776@2|Bacteria,4NUQD@976|Bacteroidetes,2FS5I@200643|Bacteroidia,22YUX@171551|Porphyromonadaceae 976|Bacteroidetes L DNA-binding protein - - - - - - - - - - - - Bac_DNA_binding,HU-DNA_bdg LIIFOLDO_03368 1122931.AUAE01000024_gene3691 7.82e-26 96.3 2C3RQ@1|root,2ZPRF@2|Bacteria,4P856@976|Bacteroidetes,2FZN9@200643|Bacteroidia,23184@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_03369 435591.BDI_0132 2.11e-91 268.0 COG3108@1|root,COG3108@2|Bacteria,4NW30@976|Bacteroidetes,2FUXK@200643|Bacteroidia 976|Bacteroidetes S Peptidase M15 - - - - - - - - - - - - Peptidase_M15_3 LIIFOLDO_03371 435591.BDI_2592 1.44e-188 524.0 COG0226@1|root,COG0226@2|Bacteria,4NJGR@976|Bacteroidetes,2FMW1@200643|Bacteroidia,22X86@171551|Porphyromonadaceae 976|Bacteroidetes P Bacterial extracellular solute-binding protein pstS - - ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 M00222 - - ko00000,ko00001,ko00002,ko02000 3.A.1.7 - - PBP_like_2 LIIFOLDO_03372 435591.BDI_2591 3.07e-197 545.0 COG2908@1|root,COG2908@2|Bacteria,4NEF1@976|Bacteroidetes,2FM2C@200643|Bacteroidia,22W7E@171551|Porphyromonadaceae 976|Bacteroidetes S UDP-2,3-diacylglucosamine hydrolase lpxH - 3.6.1.54 ko:K03269 ko00540,ko01100,map00540,map01100 M00060 R04549 RC00002 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Metallophos,Metallophos_2 LIIFOLDO_03373 435591.BDI_2590 5.99e-70 211.0 COG2151@1|root,COG2151@2|Bacteria,4NSA9@976|Bacteroidetes,2FT2N@200643|Bacteroidia,22Y47@171551|Porphyromonadaceae 976|Bacteroidetes S FeS assembly SUF system protein yitW - - - - - - - - - - - FeS_assembly_P LIIFOLDO_03374 435591.BDI_2589 1.55e-160 450.0 COG2003@1|root,COG2003@2|Bacteria,4NFBF@976|Bacteroidetes,2FNF3@200643|Bacteroidia,22XMK@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the UPF0758 family radC - - ko:K03630 - - - - ko00000 - - - RadC LIIFOLDO_03375 435591.BDI_2588 9.29e-132 374.0 COG0231@1|root,COG0231@2|Bacteria,4NDXA@976|Bacteroidetes,2FP84@200643|Bacteroidia,22VYU@171551|Porphyromonadaceae 976|Bacteroidetes J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase efp GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - ko:K02356 - - - - ko00000,ko03012 - - - EFP,EFP_N,Elong-fact-P_C LIIFOLDO_03377 435591.BDI_1700 1.46e-238 655.0 COG0778@1|root,COG0778@2|Bacteria,4NQ04@976|Bacteroidetes,2FQY3@200643|Bacteroidia,22VWP@171551|Porphyromonadaceae 976|Bacteroidetes C Nitroreductase - - - - - - - - - - - - Nitroreductase LIIFOLDO_03378 435591.BDI_1699 0.0 1241.0 COG0475@1|root,COG0589@1|root,COG0475@2|Bacteria,COG0589@2|Bacteria,4NF11@976|Bacteroidetes,2FN0I@200643|Bacteroidia,22VV7@171551|Porphyromonadaceae 976|Bacteroidetes P Sodium/hydrogen exchanger family ybaL_1 - - - - - - - - - - - Na_H_Exchanger,Usp LIIFOLDO_03379 435591.BDI_2725 0.0 1320.0 COG0457@1|root,COG2972@1|root,COG0457@2|Bacteria,COG2972@2|Bacteria,4NMSW@976|Bacteroidetes,2G06Q@200643|Bacteroidia,2304H@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase - - - - - - - - - - - - His_kinase,TPR_2,TPR_8 LIIFOLDO_03380 435591.BDI_2724 6.65e-191 531.0 COG5464@1|root,COG5464@2|Bacteria,4NHVS@976|Bacteroidetes,2G317@200643|Bacteroidia,22Y25@171551|Porphyromonadaceae 976|Bacteroidetes S PD-(D/E)XK nuclease family transposase - - - - - - - - - - - - PDDEXK_2 LIIFOLDO_03381 435591.BDI_1419 7.71e-91 265.0 2ESVK@1|root,33KDZ@2|Bacteria,4NZHI@976|Bacteroidetes,2FV4U@200643|Bacteroidia,230TB@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_03382 435591.BDI_1418 8.49e-265 726.0 COG0472@1|root,COG0472@2|Bacteria,4NGKM@976|Bacteroidetes,2FM86@200643|Bacteroidia,22W3P@171551|Porphyromonadaceae 976|Bacteroidetes M UDP-N-acetylmuramyl pentapeptide phosphotransferase mraY2 - - - - - - - - - - - Glycos_transf_4 LIIFOLDO_03383 435591.BDI_1417 8.57e-169 473.0 28PZ8@1|root,2ZCIQ@2|Bacteria,4NN6Q@976|Bacteroidetes,2FPHQ@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function (DUF4469) with IG-like fold - - - - - - - - - - - - DUF4469,HU-DNA_bdg LIIFOLDO_03385 435591.BDI_1634 0.0 1509.0 COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,2FN9Q@200643|Bacteroidia 976|Bacteroidetes V Efflux ABC transporter, permease protein - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD LIIFOLDO_03387 1235803.C825_04225 2.57e-292 797.0 COG0399@1|root,COG0399@2|Bacteria,4NFQ8@976|Bacteroidetes,2FMKJ@200643|Bacteroidia,22ZHY@171551|Porphyromonadaceae 976|Bacteroidetes E DegT/DnrJ/EryC1/StrS aminotransferase family - - 2.6.1.59 ko:K02805 - - - - ko00000,ko01000,ko01007 - - - DegT_DnrJ_EryC1 LIIFOLDO_03388 1028805.GGC_0583 5.16e-100 294.0 COG2148@1|root,COG2148@2|Bacteria,1MV6W@1224|Proteobacteria,1RMMN@1236|Gammaproteobacteria,1YABV@135625|Pasteurellales 135625|Pasteurellales M Bacterial sugar transferase - - 2.7.8.40 ko:K21303 - - - - ko00000,ko01000,ko01003,ko01005 - - - Bac_transf LIIFOLDO_03389 435591.BDI_0426 0.0 1496.0 COG0489@1|root,COG3206@1|root,COG0489@2|Bacteria,COG3206@2|Bacteria,4NEXU@976|Bacteroidetes,2FM9K@200643|Bacteroidia,22WE9@171551|Porphyromonadaceae 976|Bacteroidetes DM Chain length determinant protein ptk_3 - - - - - - - - - - - AAA_31,CbiA,GNVR,Wzz LIIFOLDO_03390 435591.BDI_3615 0.0 1112.0 COG1086@1|root,COG1086@2|Bacteria,4NERY@976|Bacteroidetes,2FMAA@200643|Bacteroidia,22WNH@171551|Porphyromonadaceae 976|Bacteroidetes GM Polysaccharide biosynthesis protein wbpM - - - - - - - - - - - CoA_binding_3,Polysacc_synt_2 LIIFOLDO_03391 435591.BDI_2935 0.0 1303.0 COG2274@1|root,COG2274@2|Bacteria,4NE19@976|Bacteroidetes,2FNRE@200643|Bacteroidia,22X33@171551|Porphyromonadaceae 976|Bacteroidetes V hmm pf03412 - - - ko:K06147 - - - - ko00000,ko02000 3.A.1.106,3.A.1.109,3.A.1.21 - - ABC_membrane,ABC_tran,Peptidase_C39 LIIFOLDO_03392 435591.BDI_1151 3.04e-122 350.0 COG0035@1|root,COG0035@2|Bacteria,4NFZM@976|Bacteroidetes,2FN3M@200643|Bacteroidia,22WRM@171551|Porphyromonadaceae 976|Bacteroidetes F uracil phosphoribosyltransferase upp - 2.4.2.9 ko:K00761 ko00240,ko01100,map00240,map01100 - R00966 RC00063 ko00000,ko00001,ko01000 - - - UPRTase LIIFOLDO_03393 435591.BDI_1152 0.0 1258.0 COG0642@1|root,COG2205@2|Bacteria,4NDXU@976|Bacteroidetes,2FNIT@200643|Bacteroidia,22WZF@171551|Porphyromonadaceae 976|Bacteroidetes T PAS domain - - - - - - - - - - - - GAF,GAF_2,HATPase_c,HisKA,PAS_3,PAS_8,PAS_9,Response_reg LIIFOLDO_03394 435591.BDI_0543 8.07e-233 640.0 COG0167@1|root,COG0167@2|Bacteria,4NF4D@976|Bacteroidetes,2FM0X@200643|Bacteroidia,22WFK@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the conversion of dihydroorotate to orotate - - 1.3.98.1 ko:K00226 ko00240,ko01100,map00240,map01100 M00051 R01867 RC00051 ko00000,ko00001,ko00002,ko01000 - - - DHO_dh LIIFOLDO_03395 435591.BDI_0544 8.71e-156 437.0 COG0325@1|root,COG0325@2|Bacteria,4NE42@976|Bacteroidetes,2FM94@200643|Bacteroidia,22XNT@171551|Porphyromonadaceae 976|Bacteroidetes S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis yggS - - ko:K06997 - - - - ko00000 - - - Ala_racemase_N LIIFOLDO_03396 435591.BDI_0545 1.26e-112 323.0 2985A@1|root,2ZVB7@2|Bacteria,4NNTB@976|Bacteroidetes,2FPUX@200643|Bacteroidia,22XX1@171551|Porphyromonadaceae 976|Bacteroidetes S Phage tail protein - - - - - - - - - - - - DUF4494 LIIFOLDO_03397 435591.BDI_3170 3.98e-135 384.0 COG0671@1|root,COG0671@2|Bacteria,4NPUG@976|Bacteroidetes,2FSUS@200643|Bacteroidia,22YR5@171551|Porphyromonadaceae 976|Bacteroidetes I Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - PAP2 LIIFOLDO_03398 435591.BDI_3169 0.0 916.0 COG1508@1|root,COG1508@2|Bacteria,4NE5B@976|Bacteroidetes,2FM52@200643|Bacteroidia,22VUP@171551|Porphyromonadaceae 976|Bacteroidetes K RNA polymerase sigma54 factor rpoN - - ko:K03092 ko02020,ko05111,map02020,map05111 - - - ko00000,ko00001,ko03021 - - - Sigma54_AID,Sigma54_CBD,Sigma54_DBD LIIFOLDO_03399 435591.BDI_1688 1.09e-120 343.0 COG1443@1|root,COG1443@2|Bacteria,4NJUP@976|Bacteroidetes,2FNMR@200643|Bacteroidia,22XUF@171551|Porphyromonadaceae 976|Bacteroidetes I NUDIX domain - - - - - - - - - - - - IspA,NUDIX LIIFOLDO_03400 435591.BDI_1687 0.0 984.0 COG0550@1|root,COG0550@2|Bacteria,4NE6R@976|Bacteroidetes,2FN9D@200643|Bacteroidia,22W25@171551|Porphyromonadaceae 976|Bacteroidetes L DNA topoisomerase III topB - 5.99.1.2 ko:K03169 - - - - ko00000,ko01000,ko03032 - - - Topoisom_bac,Toprim LIIFOLDO_03401 435591.BDI_0146 3.28e-179 499.0 COG0637@1|root,COG0637@2|Bacteria,4NJS1@976|Bacteroidetes,2FN13@200643|Bacteroidia,22W0C@171551|Porphyromonadaceae 976|Bacteroidetes S HAD hydrolase, family IA, variant 3 yfbT - - - - - - - - - - - HAD_2 LIIFOLDO_03402 435591.BDI_0145 1.81e-221 610.0 COG1082@1|root,COG1082@2|Bacteria,4NJ3Z@976|Bacteroidetes,2FNWR@200643|Bacteroidia,22XN3@171551|Porphyromonadaceae 976|Bacteroidetes G Xylose isomerase-like TIM barrel - - - - - - - - - - - - AP_endonuc_2 LIIFOLDO_03403 435591.BDI_1590 2.93e-96 296.0 COG0358@1|root,COG5545@1|root,COG0358@2|Bacteria,COG5545@2|Bacteria,4NETK@976|Bacteroidetes,2FRDX@200643|Bacteroidia 976|Bacteroidetes L Primase C terminal 2 (PriCT-2) - - - - - - - - - - - - DUF3987,PriCT_2,VirE_N LIIFOLDO_03404 471870.BACINT_02323 4.25e-31 111.0 298PA@1|root,2ZW23@2|Bacteria,4P8MY@976|Bacteroidetes,2FUSW@200643|Bacteroidia,4ASEW@815|Bacteroidaceae 976|Bacteroidetes S Domain of unknown function (DUF4248) - - - - - - - - - - - - DUF4248 LIIFOLDO_03405 435591.BDI_1592 2.51e-101 295.0 COG0776@1|root,COG0776@2|Bacteria,4NUQD@976|Bacteroidetes,2FT95@200643|Bacteroidia,230KU@171551|Porphyromonadaceae 976|Bacteroidetes L Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - Bac_DNA_binding,HU-DNA_bdg LIIFOLDO_03406 997884.HMPREF1068_01435 0.000452 39.3 2B9FP@1|root,322TM@2|Bacteria,4P9UJ@976|Bacteroidetes,2FVHI@200643|Bacteroidia,4ASKX@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - LIIFOLDO_03407 435591.BDI_1047 8.19e-134 379.0 COG1704@1|root,COG1704@2|Bacteria,4NMD3@976|Bacteroidetes,2FNPV@200643|Bacteroidia,22XSI@171551|Porphyromonadaceae 976|Bacteroidetes S LemA family lemA - - ko:K03744 - - - - ko00000 - - - LemA LIIFOLDO_03408 435591.BDI_1125 0.0 883.0 COG1726@1|root,COG1726@2|Bacteria,4NEDQ@976|Bacteroidetes,2FN6J@200643|Bacteroidia,22XC8@171551|Porphyromonadaceae 976|Bacteroidetes C NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol nqrA - 1.6.5.8 ko:K00346 - - - - ko00000,ko01000 - - - NQRA,NQRA_SLBB ## 3129 queries scanned ## Total time (seconds): 262.199654340744 ## Rate: 11.93 q/s