Rank Genome ID Species Strain BioSample ID Date Location Host Allelic distance ARGs VFs PGs PPRS 1 GCA_036837845.1 Parabacteroides merdae CTOTU13337 SAMN28751104 - - - 0 0 0 0 0.00 2 GCA_009719515.1 Parabacteroides merdae BIOML-A28 SAMN11946264 2016-02-19 USA Homo sapiens 712 4 0 1 4.12 3 GCA_009719555.1 Parabacteroides merdae BIOML-A29 SAMN11946265 2016-02-19 USA Homo sapiens 712 4 0 1 4.12 4 GCA_022733635.1 Parabacteroides merdae Map_8_012 SAMN20302118 2016-09-19 Mozambique Homo sapiens 713 0 0 1 1.00 5 GCA_958432745.1 Parabacteroides merdae SRR17382092_bin.15_MetaWRAP_v1.3_MAG SAMEA114066320 2019-12 - - 714 0 0 1 1.00 6 GCA_009719605.1 Parabacteroides merdae BIOML-A27 SAMN11946263 2016-02-19 USA Homo sapiens 716 4 0 1 4.12 7 GCA_036849335.1 Parabacteroides merdae CTOTU30651 SAMN28751812 - - - 727 0 0 1 1.00 8 GCA_022719835.1 Parabacteroides merdae CHE524_005 SAMN20300869 - USA Homo sapiens 770 0 0 1 1.00 9 GCA_018784105.1 Parabacteroides merdae MCC685 SAMN12147421 - Ireland Homo sapiens 771 1 0 1 1.41 10 GCA_005844535.1 Parabacteroides merdae 1001175st1_A1 SAMN10863250 2016-03-14 USA Homo sapiens 783 6 0 1 6.08 11 GCA_015552245.1 Parabacteroides merdae 1001175B_160314_A1 SAMN15533086 2016-03-14 USA Homo sapiens 783 6 0 1 6.08 12 GCA_036807045.1 Parabacteroides merdae CTOTU30069 SAMN28749740 - - - 795 0 0 0 0.00 13 GCA_948465985.1 Parabacteroides merdae SRR17684618_bin.62_metawrap_v1.3_MAG SAMEA112353645 2021-01-01 Canada - 797 0 0 1 1.00 14 GCA_020563655.1 Parabacteroides merdae DFI.1.110 SAMN22167311 - USA Homo sapiens 799 2 0 1 2.24 15 GCA_022137325.1 Parabacteroides merdae DFI.1.88 SAMN24725983 - USA Homo sapiens 801 2 0 1 2.24 16 GCA_022138085.1 Parabacteroides merdae DFI.1.192 SAMN24725962 - USA Homo sapiens 801 2 0 1 2.24 17 GCA_024463475.1 Parabacteroides merdae DFI.1.92 SAMN28944483 - USA Homo sapiens 801 2 0 1 2.24 18 GCA_022734235.1 Parabacteroides merdae Map_77_010 SAMN20302087 2016-08-22 Mozambique Homo sapiens 809 0 0 1 1.00 19 GCA_959026335.1 Parabacteroides merdae SRR13494520_bin.54_MetaWRAP_v1.3_MAG SAMEA114096697 2018-01-17 USA - 810 0 0 1 1.00 20 GCA_009677855.1 Parabacteroides merdae BIOML-A1 SAMN11946237 2015-04-01 USA Homo sapiens 811 2 0 1 2.24 21 GCA_009719915.1 Parabacteroides merdae BIOML-A9 SAMN11946245 2015-04-01 USA Homo sapiens 811 2 0 1 2.24 22 GCA_009719945.1 Parabacteroides merdae BIOML-A7 SAMN11946243 2015-04-01 USA Homo sapiens 811 2 0 1 2.24 23 GCA_009719965.1 Parabacteroides merdae BIOML-A5 SAMN11946241 2015-04-01 USA Homo sapiens 811 2 0 1 2.24 24 GCA_009719975.1 Parabacteroides merdae BIOML-A6 SAMN11946242 2015-04-01 USA Homo sapiens 811 2 0 1 2.24 25 GCA_009720015.1 Parabacteroides merdae BIOML-A4 SAMN11946240 2015-04-01 USA Homo sapiens 811 2 0 1 2.24 26 GCA_009720045.1 Parabacteroides merdae BIOML-A2 SAMN11946238 2015-04-01 USA Homo sapiens 811 2 0 1 2.24 27 GCA_009719865.1 Parabacteroides merdae BIOML-A11 SAMN11946247 2015-04-01 USA Homo sapiens 812 2 0 1 2.24 28 GCA_028326715.1 Parabacteroides merdae BSD2780120875st1_C2_BSD2780120875_150330 SAMN31322789 2015-03-30 USA Homo sapiens 818 4 0 1 4.12 29 GCA_015558445.1 Parabacteroides merdae BSD2780120875b_170604_B5 SAMN15532601 2017-06-04 USA Homo sapiens 819 4 0 1 4.12 30 GCA_028326955.1 Parabacteroides merdae BSD2780120875st1_D1_BSD2780120875b_170604 SAMN31322790 2017-06-04 USA Homo sapiens 819 4 0 1 4.12 31 GCA_034171025.1 Parabacteroides merdae SUG3465 SAMN37949450 2020 Canada swine 819 0 0 1 1.00 32 GCA_022720235.1 Parabacteroides merdae CHE518_007 SAMN20300850 - USA Homo sapiens 821 1 5 2 5.48 33 GCA_947507315.1 Parabacteroides merdae SRR13753901_bin.1_metawrap_v1.3_MAG SAMEA112181798 2019-07-02 USA - 828 0 0 1 1.00 34 GCA_028328355.1 Parabacteroides merdae RTP21484st1_E1_RTP21484_190118 SAMN31322803 2019-01-18 USA Homo sapiens 830 3 0 1 3.16 35 GCA_028328305.1 Parabacteroides merdae RTP21484st1_A7_RTP21484_190118 SAMN31322802 2019-01-18 USA Homo sapiens 831 3 0 1 3.16 36 GCA_947071195.1 Parabacteroides merdae SRR13840124_bin.4_metawrap_v1.3_MAG SAMEA111477099 - USA - 864 0 0 0 0.00 37 GCA_958406675.1 Parabacteroides merdae ERR8263833_bin.17_MetaWRAP_v1.3_MAG SAMEA114060717 - - - 867 0 0 0 0.00 38 GCA_009719845.1 Parabacteroides merdae BIOML-A12 SAMN11946248 2015-01-07 USA Homo sapiens 875 1 0 1 1.41 39 GCA_003540425.1 Parabacteroides merdae UBA9108 SAMN08019952 - - - 887 0 0 1 1.00 40 GCA_022735225.1 Parabacteroides merdae Map_7_009 SAMN20302021 2015-08-24 Mozambique Homo sapiens 888 0 0 1 1.00 41 GCA_000433955.1 Parabacteroides merdae CAG:48 SAMEA3138585 - - - 889 0 0 1 1.00 42 GCA_036837885.1 Parabacteroides merdae CTOTU13359 SAMN28751012 - - - 892 0 0 1 1.00 43 GCA_022731965.1 Parabacteroides merdae Map_89_018 SAMN20302200 2016-03-10 Mozambique Homo sapiens 894 0 0 1 1.00 44 GCA_958404825.1 Parabacteroides merdae ERR10960871_bin.1_MetaWRAP_v1.3_MAG SAMEA114061391 2018 Kenya - 899 0 0 1 1.00 45 GCA_022746615.1 Parabacteroides merdae Map_129_021 SAMN20301217 2017-10-22 Mozambique Homo sapiens 901 0 0 1 1.00 46 GCA_015555255.1 Parabacteroides merdae D52t1_170925_B4 SAMN15532560 2017-09-25 USA Homo sapiens 903 0 0 1 1.00 47 GCA_028326765.1 Parabacteroides merdae D52st1_G3_D52t1_170925 SAMN31322796 2017-09-25 USA Homo sapiens 903 0 0 1 1.00 48 GCA_028328455.1 Parabacteroides merdae D52st1_D10_D52t1_170925 SAMN31322795 2017-09-25 USA Homo sapiens 903 0 0 1 1.00 49 GCA_949297745.1 Parabacteroides merdae Batch3_idba_bin.620 SAMEA112663287 - Ethiopia - 903 0 0 1 1.00 50 GCA_958410745.1 Parabacteroides merdae ERR9322429_bin.14_MetaWRAP_v1.3_MAG SAMEA114060956 - - - 904 0 0 1 1.00 51 GCA_959019525.1 Parabacteroides merdae SRR20881974_bin.1_MetaWRAP_v1.3_MAG SAMEA114095515 2019-05-01 USA - 904 0 0 1 1.00 52 GCA_022783065.1 Parabacteroides merdae SUG879 SAMN26526103 2019 Canada Sus scrofa domesticus 907 2 0 1 2.24 53 GCA_934852545.1 Parabacteroides merdae MTG234_bin.63.fa SAMEA13566805 - - - 907 1 0 1 1.41 54 GCA_934875805.1 Parabacteroides merdae MTG247_bin.13.fa SAMEA13567497 - - - 907 1 0 1 1.41 55 GCA_958435975.1 Parabacteroides merdae SRR18940302_bin.10_MetaWRAP_v1.3_MAG SAMEA114064873 2020 - - 907 0 0 1 1.00 56 GCA_934872035.1 Parabacteroides merdae MTG238_bin.2.fa SAMEA13566995 - - - 908 0 0 1 1.00 57 GCA_948961025.1 Parabacteroides merdae MGBC123275 SAMEA112396761 - China - 908 0 0 0 0.00 58 GCA_015547975.1 Parabacteroides merdae D54t1_190329_G1 SAMN15532705 2019-03-29 USA Homo sapiens 910 2 0 1 2.24 59 GCA_028326635.1 Parabacteroides merdae D54st1_C9_D54t1_190329 SAMN31322798 2019-03-29 USA Homo sapiens 910 2 0 1 2.24 60 GCA_028328345.1 Parabacteroides merdae D54st1_H2_D54t1_190329 SAMN31322801 2019-03-29 USA Homo sapiens 910 2 0 1 2.24 61 GCA_028328395.1 Parabacteroides merdae D54st1_G7_D54t1_190329 SAMN31322800 2019-03-29 USA Homo sapiens 910 2 0 1 2.24 62 GCA_028328425.1 Parabacteroides merdae D54st1_A3_D54t1_190329 SAMN31322797 2019-03-29 USA Homo sapiens 910 2 0 1 2.24 63 GCA_934841295.1 Parabacteroides merdae MTG233_bin.35.fa SAMEA13566726 - - - 910 1 0 1 1.41 64 GCA_934841555.1 Parabacteroides merdae MTG232_bin.14.fa SAMEA13566651 - - - 910 1 0 1 1.41 65 GCA_934852715.1 Parabacteroides merdae MTG235_bin.14.fa SAMEA13566824 - - - 910 0 0 1 1.00 66 GCA_934854775.1 Parabacteroides merdae MTG237_bin.39.fa SAMEA13566987 - - - 910 1 0 1 1.41 67 GCA_934864295.1 Parabacteroides merdae MTG236_bin.17.fa SAMEA13566899 - - - 910 1 0 1 1.41 68 GCA_934871325.1 Parabacteroides merdae MTG240_bin.23.fa SAMEA13567126 - - - 910 0 0 1 1.00 69 GCA_934872915.1 Parabacteroides merdae MTG246_bin.22.fa SAMEA13567447 - - - 910 0 0 1 1.00 70 GCA_934876355.1 Parabacteroides merdae MTG239_bin.6.fa SAMEA13567058 - - - 910 1 0 1 1.41 71 GCA_934883205.1 Parabacteroides merdae MTG248_bin.24.fa SAMEA13567572 - - - 910 0 0 1 1.00 72 GCA_003507315.1 Parabacteroides merdae UBA11481 SAMN08018825 - - - 913 0 0 1 1.00 73 GCA_028328385.1 Parabacteroides merdae 1028st1_A4_1028SCRN_200821 SAMN31322781 2020-08-21 USA Homo sapiens 915 1 0 1 1.41 74 GCA_014870605.1 Parabacteroides merdae COPD090 SAMN12905037 2015-04/2016-09 Australia Homo sapiens 916 0 0 1 1.00 75 GCA_034134505.1 Parabacteroides merdae S_657 SAMN37770249 - Denmark Homo sapiens 916 0 0 0 0.00 76 GCA_036552125.1 Parabacteroides merdae DOME_MAG_8922 SAMN38021852 - USA Homo sapiens 916 0 0 1 1.00 77 GCA_015553045.1 Parabacteroides merdae D53t1_180928_D7 SAMN15533003 2018-09-28 USA Homo sapiens 920 1 0 1 1.41 78 GCA_018289315.1 Parabacteroides merdae CL06T03C08 SAMN16451193 2009-05 USA Homo sapiens 920 1 0 1 1.41 79 GCA_026169675.1 Parabacteroides merdae bin_3_LilbubCat SAMN31537019 2022 USA Felis catus 922 0 0 1 1.00 80 GCA_028328565.1 Parabacteroides merdae 1001713st1_A4_1001713B170221_170320 SAMN31322773 2017-03-20 USA Homo sapiens 922 2 0 1 2.24 81 GCA_003438825.1 Parabacteroides merdae OM06-16AC SAMN09736819 2013-12-01 China Homo sapiens 923 5 0 1 5.10 82 GCA_015558865.1 Parabacteroides merdae 1001136B_160425_B1 SAMN15533221 2016-04-25 USA Homo sapiens 923 4 0 1 4.12 83 GCA_021411685.1 Parabacteroides merdae BJH_172 SAMN20148139 - USA Homo sapiens 923 3 0 1 3.16 84 GCA_027686665.1 Parabacteroides merdae AF101-95 SAMN31807787 2014-02-01 China Homo sapiens 923 5 0 1 5.10 85 GCA_027686805.1 Parabacteroides merdae AF101-58 SAMN31807779 2014-02-01 China Homo sapiens 923 5 0 1 5.10 86 GCA_028326725.1 Parabacteroides merdae 1001713st1_F6_1001713B170221_170320 SAMN31322779 2017-03-20 USA Homo sapiens 923 2 0 1 2.24 87 GCA_015547825.1 Parabacteroides merdae 1001713B170207_170306_F10 SAMN15532439 2017-03-06 USA Homo sapiens 925 2 0 1 2.24 88 GCA_028326665.1 Parabacteroides merdae 1001713st1_B7_1001713B170131_170501 SAMN31322775 2017-05-01 USA Homo sapiens 925 2 0 1 2.24 89 GCA_028326685.1 Parabacteroides merdae 1001713st1_C2_1001713B170214_170313 SAMN31322776 2017-03-13 USA Homo sapiens 925 2 0 1 2.24 90 GCA_028328445.1 Parabacteroides merdae 1001713st1_G4_1001713B170207_170306 SAMN31322780 2017-03-06 USA Homo sapiens 925 2 0 1 2.24 91 GCA_028328525.1 Parabacteroides merdae 1001713st1_E11_1001713B170207_170306 SAMN31322777 2017-03-06 USA Homo sapiens 925 2 0 1 2.24 92 GCA_028328535.1 Parabacteroides merdae 1001713st1_B1_1001713B170131_170501 SAMN31322774 2017-05-01 USA Homo sapiens 925 2 0 1 2.24 93 GCA_028328485.1 Parabacteroides merdae 1001713st1_E1_1001713B170214_170313 SAMN31322778 2017-03-13 USA Homo sapiens 926 2 0 1 2.24 94 GCA_022721235.1 Parabacteroides merdae Map_116_023 SAMN20301106 2016-08-24 Mozambique Homo sapiens 930 0 0 1 1.00 95 GCA_009719765.1 Parabacteroides merdae BIOML-A19 SAMN11946255 2015-05-20 USA Homo sapiens 931 1 0 1 1.41 96 GCA_022726515.1 Parabacteroides merdae Map_21_009 SAMN20301614 2015-05-13 Mozambique Homo sapiens 931 0 0 1 1.00 97 GCA_022745165.1 Parabacteroides merdae Map_20_009 SAMN20301567 2015-06-17 Mozambique Homo sapiens 931 0 0 1 1.00 98 GCA_028326705.1 Parabacteroides merdae D35st1_A2_D35t1_190705 SAMN31322792 2019-07-05 USA Homo sapiens 931 2 0 1 2.24 99 GCA_948955895.1 Parabacteroides merdae MGBC125402 SAMEA112398864 - China - 931 0 0 1 1.00 100 GCA_027693525.1 Parabacteroides merdae OF25-24MHA SAMN31809681 2014-02-01 China Homo sapiens 932 4 0 1 4.12