GCA_037283365.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaICEJKCOP_3 (original name was: gnl|Prokka|ICEJKCOP_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	RiPP-like	195,575	201,285

gnlProkkaICEJKCOP_19 (original name was: gnl|Prokka|ICEJKCOP_19)

Region	Type	From	To	Most similar known cluster		Similarity
Region 19.1	RiPP-like	34,773	47,019

gnlProkkaICEJKCOP_29 (original name was: gnl|Prokka|ICEJKCOP_29)

Region	Type	From	To	Most similar known cluster		Similarity
Region 29.1	RiPP-like	5,121	15,638

gnlProkkaICEJKCOP_39 (original name was: gnl|Prokka|ICEJKCOP_39)

Region	Type	From	To	Most similar known cluster		Similarity
Region 39.1	RiPP-like	4,781	12,202

Region	Type	From	To	Similarity
Region 3.1	RiPP-like	195,575	201,285
Region 19.1	RiPP-like	34,773	47,019
Region 29.1	RiPP-like	5,121	15,638
Region 39.1	RiPP-like	4,781	12,202

No secondary metabolite regions were found in these records:: gnlProkkaICEJKCOP_1 (original name was: gnl|Prokka|ICEJKCOP_1); gnlProkkaICEJKCOP_2 (original name was: gnl|Prokka|ICEJKCOP_2); gnlProkkaICEJKCOP_4 (original name was: gnl|Prokka|ICEJKCOP_4); gnlProkkaICEJKCOP_5 (original name was: gnl|Prokka|ICEJKCOP_5); gnlProkkaICEJKCOP_6 (original name was: gnl|Prokka|ICEJKCOP_6); gnlProkkaICEJKCOP_7 (original name was: gnl|Prokka|ICEJKCOP_7); gnlProkkaICEJKCOP_8 (original name was: gnl|Prokka|ICEJKCOP_8); gnlProkkaICEJKCOP_9 (original name was: gnl|Prokka|ICEJKCOP_9); gnlProkkaICEJKCOP_10 (original name was: gnl|Prokka|ICEJKCOP_10); gnlProkkaICEJKCOP_11 (original name was: gnl|Prokka|ICEJKCOP_11); gnlProkkaICEJKCOP_12 (original name was: gnl|Prokka|ICEJKCOP_12); gnlProkkaICEJKCOP_13 (original name was: gnl|Prokka|ICEJKCOP_13); gnlProkkaICEJKCOP_14 (original name was: gnl|Prokka|ICEJKCOP_14); gnlProkkaICEJKCOP_15 (original name was: gnl|Prokka|ICEJKCOP_15); gnlProkkaICEJKCOP_16 (original name was: gnl|Prokka|ICEJKCOP_16); gnlProkkaICEJKCOP_17 (original name was: gnl|Prokka|ICEJKCOP_17); gnlProkkaICEJKCOP_18 (original name was: gnl|Prokka|ICEJKCOP_18); gnlProkkaICEJKCOP_20 (original name was: gnl|Prokka|ICEJKCOP_20); gnlProkkaICEJKCOP_21 (original name was: gnl|Prokka|ICEJKCOP_21); gnlProkkaICEJKCOP_22 (original name was: gnl|Prokka|ICEJKCOP_22); gnlProkkaICEJKCOP_23 (original name was: gnl|Prokka|ICEJKCOP_23); gnlProkkaICEJKCOP_24 (original name was: gnl|Prokka|ICEJKCOP_24); gnlProkkaICEJKCOP_25 (original name was: gnl|Prokka|ICEJKCOP_25); gnlProkkaICEJKCOP_26 (original name was: gnl|Prokka|ICEJKCOP_26); gnlProkkaICEJKCOP_27 (original name was: gnl|Prokka|ICEJKCOP_27); gnlProkkaICEJKCOP_28 (original name was: gnl|Prokka|ICEJKCOP_28); gnlProkkaICEJKCOP_30 (original name was: gnl|Prokka|ICEJKCOP_30); gnlProkkaICEJKCOP_31 (original name was: gnl|Prokka|ICEJKCOP_31); gnlProkkaICEJKCOP_32 (original name was: gnl|Prokka|ICEJKCOP_32); gnlProkkaICEJKCOP_33 (original name was: gnl|Prokka|ICEJKCOP_33); gnlProkkaICEJKCOP_34 (original name was: gnl|Prokka|ICEJKCOP_34); gnlProkkaICEJKCOP_35 (original name was: gnl|Prokka|ICEJKCOP_35); gnlProkkaICEJKCOP_36 (original name was: gnl|Prokka|ICEJKCOP_36); gnlProkkaICEJKCOP_37 (original name was: gnl|Prokka|ICEJKCOP_37); gnlProkkaICEJKCOP_38 (original name was: gnl|Prokka|ICEJKCOP_38); gnlProkkaICEJKCOP_40 (original name was: gnl|Prokka|ICEJKCOP_40); gnlProkkaICEJKCOP_41 (original name was: gnl|Prokka|ICEJKCOP_41); gnlProkkaICEJKCOP_42 (original name was: gnl|Prokka|ICEJKCOP_42); gnlProkkaICEJKCOP_43 (original name was: gnl|Prokka|ICEJKCOP_43); gnlProkkaICEJKCOP_44 (original name was: gnl|Prokka|ICEJKCOP_44); gnlProkkaICEJKCOP_45 (original name was: gnl|Prokka|ICEJKCOP_45); gnlProkkaICEJKCOP_46 (original name was: gnl|Prokka|ICEJKCOP_46); gnlProkkaICEJKCOP_47 (original name was: gnl|Prokka|ICEJKCOP_47); gnlProkkaICEJKCOP_48 (original name was: gnl|Prokka|ICEJKCOP_48); gnlProkkaICEJKCOP_49 (original name was: gnl|Prokka|ICEJKCOP_49); gnlProkkaICEJKCOP_50 (original name was: gnl|Prokka|ICEJKCOP_50); gnlProkkaICEJKCOP_51 (original name was: gnl|Prokka|ICEJKCOP_51); gnlProkkaICEJKCOP_52 (original name was: gnl|Prokka|ICEJKCOP_52); gnlProkkaICEJKCOP_53 (original name was: gnl|Prokka|ICEJKCOP_53); gnlProkkaICEJKCOP_54 (original name was: gnl|Prokka|ICEJKCOP_54); gnlProkkaICEJKCOP_55 (original name was: gnl|Prokka|ICEJKCOP_55); gnlProkkaICEJKCOP_56 (original name was: gnl|Prokka|ICEJKCOP_56); gnlProkkaICEJKCOP_57 (original name was: gnl|Prokka|ICEJKCOP_57); gnlProkkaICEJKCOP_58 (original name was: gnl|Prokka|ICEJKCOP_58); gnlProkkaICEJKCOP_59 (original name was: gnl|Prokka|ICEJKCOP_59); gnlProkkaICEJKCOP_60 (original name was: gnl|Prokka|ICEJKCOP_60)

Compact view

gnlProkkaICEJKCOP_3 - Region 1 - RiPP-like

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Location: 195,575 - 201,285 nt. (total: 5,711 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaICEJKCOP_19 - Region 1 - RiPP-like

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Location: 34,773 - 47,019 nt. (total: 12,247 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaICEJKCOP_29 - Region 1 - RiPP-like

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Location: 5,121 - 15,638 nt. (total: 10,518 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaICEJKCOP_39 - Region 1 - RiPP-like

Download region GenBank file

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Location: 4,781 - 12,202 nt. (total: 7,422 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.