GCA_037283885.1 - 5 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaMEPIAJDL_1 (original name was: gnl|Prokka|MEPIAJDL_1)

Region	Type	From	To
Region 1.1	T3PKS	653,894	695,063
Region 1.2	RiPP-like	2,120,792	2,132,006
Region 1.3	cyclic-lactone-autoinducer	2,562,469	2,583,174
Region 1.4	terpene	2,838,054	2,858,935

gnlProkkaMEPIAJDL_2 (original name was: gnl|Prokka|MEPIAJDL_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	RiPP-like	1	9,433	coagulin	RiPP	40%

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	T3PKS	653,894	695,063
Region 1.2	RiPP-like	2,120,792	2,132,006
Region 1.3	cyclic-lactone-autoinducer	2,562,469	2,583,174
Region 1.4	terpene	2,838,054	2,858,935
Region 2.1	RiPP-like	1	9,433	coagulin	RiPP	40%

No secondary metabolite regions were found in these records:: gnlProkkaMEPIAJDL_3 (original name was: gnl|Prokka|MEPIAJDL_3); gnlProkkaMEPIAJDL_4 (original name was: gnl|Prokka|MEPIAJDL_4); gnlProkkaMEPIAJDL_5 (original name was: gnl|Prokka|MEPIAJDL_5); gnlProkkaMEPIAJDL_6 (original name was: gnl|Prokka|MEPIAJDL_6); gnlProkkaMEPIAJDL_7 (original name was: gnl|Prokka|MEPIAJDL_7); gnlProkkaMEPIAJDL_8 (original name was: gnl|Prokka|MEPIAJDL_8); gnlProkkaMEPIAJDL_9 (original name was: gnl|Prokka|MEPIAJDL_9); gnlProkkaMEPIAJDL_10 (original name was: gnl|Prokka|MEPIAJDL_10); gnlProkkaMEPIAJDL_11 (original name was: gnl|Prokka|MEPIAJDL_11); gnlProkkaMEPIAJDL_12 (original name was: gnl|Prokka|MEPIAJDL_12); gnlProkkaMEPIAJDL_13 (original name was: gnl|Prokka|MEPIAJDL_13); gnlProkkaMEPIAJDL_14 (original name was: gnl|Prokka|MEPIAJDL_14); gnlProkkaMEPIAJDL_15 (original name was: gnl|Prokka|MEPIAJDL_15)

Compact view

gnlProkkaMEPIAJDL_1 - Region 1 - T3PKS

Download region GenBank file

Download region SVG

Location: 653,894 - 695,063 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMEPIAJDL_1 - Region 2 - RiPP-like

Download region GenBank file

Download region SVG

Location: 2,120,792 - 2,132,006 nt. (total: 11,215 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMEPIAJDL_1 - Region 3 - cyclic-lactone-autoinducer

Download region GenBank file

Download region SVG

Location: 2,562,469 - 2,583,174 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMEPIAJDL_1 - Region 4 - terpene

Download region GenBank file

Download region SVG

Location: 2,838,054 - 2,858,935 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMEPIAJDL_2 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 1 - 9,433 nt. (total: 9,433 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1