GCA_038001345.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaKNEDKBCE_48 (original name was: gnl|Prokka|KNEDKBCE_48)

Region	Type	From	To	Most similar known cluster		Similarity
Region 48.1	phosphonate	10,618	39,133

gnlProkkaKNEDKBCE_51 (original name was: gnl|Prokka|KNEDKBCE_51)

Region	Type	From	To	Most similar known cluster		Similarity
Region 51.1	RiPP-like	37,771	46,882

gnlProkkaKNEDKBCE_52 (original name was: gnl|Prokka|KNEDKBCE_52)

Region	Type	From	To	Most similar known cluster		Similarity
Region 52.1	RiPP-like	12,620	28,102	gassericin T	RiPP	44%

gnlProkkaKNEDKBCE_56 (original name was: gnl|Prokka|KNEDKBCE_56)

Region	Type	From	To	Most similar known cluster		Similarity
Region 56.1	RiPP-like	17,903	28,838

Region	Type	From	To	Most similar known cluster	Similarity
Region 48.1	phosphonate	10,618	39,133
Region 51.1	RiPP-like	37,771	46,882
Region 52.1	RiPP-like	12,620	28,102	gassericin T	RiPP	44%
Region 56.1	RiPP-like	17,903	28,838

No secondary metabolite regions were found in these records:: gnlProkkaKNEDKBCE_1 (original name was: gnl|Prokka|KNEDKBCE_1); gnlProkkaKNEDKBCE_2 (original name was: gnl|Prokka|KNEDKBCE_2); gnlProkkaKNEDKBCE_3 (original name was: gnl|Prokka|KNEDKBCE_3); gnlProkkaKNEDKBCE_4 (original name was: gnl|Prokka|KNEDKBCE_4); gnlProkkaKNEDKBCE_5 (original name was: gnl|Prokka|KNEDKBCE_5); gnlProkkaKNEDKBCE_6 (original name was: gnl|Prokka|KNEDKBCE_6); gnlProkkaKNEDKBCE_7 (original name was: gnl|Prokka|KNEDKBCE_7); gnlProkkaKNEDKBCE_8 (original name was: gnl|Prokka|KNEDKBCE_8); gnlProkkaKNEDKBCE_9 (original name was: gnl|Prokka|KNEDKBCE_9); gnlProkkaKNEDKBCE_10 (original name was: gnl|Prokka|KNEDKBCE_10); gnlProkkaKNEDKBCE_11 (original name was: gnl|Prokka|KNEDKBCE_11); gnlProkkaKNEDKBCE_12 (original name was: gnl|Prokka|KNEDKBCE_12); gnlProkkaKNEDKBCE_13 (original name was: gnl|Prokka|KNEDKBCE_13); gnlProkkaKNEDKBCE_14 (original name was: gnl|Prokka|KNEDKBCE_14); gnlProkkaKNEDKBCE_15 (original name was: gnl|Prokka|KNEDKBCE_15); gnlProkkaKNEDKBCE_16 (original name was: gnl|Prokka|KNEDKBCE_16); gnlProkkaKNEDKBCE_17 (original name was: gnl|Prokka|KNEDKBCE_17); gnlProkkaKNEDKBCE_18 (original name was: gnl|Prokka|KNEDKBCE_18); gnlProkkaKNEDKBCE_19 (original name was: gnl|Prokka|KNEDKBCE_19); gnlProkkaKNEDKBCE_20 (original name was: gnl|Prokka|KNEDKBCE_20); gnlProkkaKNEDKBCE_21 (original name was: gnl|Prokka|KNEDKBCE_21); gnlProkkaKNEDKBCE_22 (original name was: gnl|Prokka|KNEDKBCE_22); gnlProkkaKNEDKBCE_23 (original name was: gnl|Prokka|KNEDKBCE_23); gnlProkkaKNEDKBCE_24 (original name was: gnl|Prokka|KNEDKBCE_24); gnlProkkaKNEDKBCE_25 (original name was: gnl|Prokka|KNEDKBCE_25); gnlProkkaKNEDKBCE_26 (original name was: gnl|Prokka|KNEDKBCE_26); gnlProkkaKNEDKBCE_27 (original name was: gnl|Prokka|KNEDKBCE_27); gnlProkkaKNEDKBCE_28 (original name was: gnl|Prokka|KNEDKBCE_28); gnlProkkaKNEDKBCE_29 (original name was: gnl|Prokka|KNEDKBCE_29); gnlProkkaKNEDKBCE_30 (original name was: gnl|Prokka|KNEDKBCE_30); gnlProkkaKNEDKBCE_31 (original name was: gnl|Prokka|KNEDKBCE_31); gnlProkkaKNEDKBCE_32 (original name was: gnl|Prokka|KNEDKBCE_32); gnlProkkaKNEDKBCE_33 (original name was: gnl|Prokka|KNEDKBCE_33); gnlProkkaKNEDKBCE_34 (original name was: gnl|Prokka|KNEDKBCE_34); gnlProkkaKNEDKBCE_35 (original name was: gnl|Prokka|KNEDKBCE_35); gnlProkkaKNEDKBCE_36 (original name was: gnl|Prokka|KNEDKBCE_36); gnlProkkaKNEDKBCE_37 (original name was: gnl|Prokka|KNEDKBCE_37); gnlProkkaKNEDKBCE_38 (original name was: gnl|Prokka|KNEDKBCE_38); gnlProkkaKNEDKBCE_39 (original name was: gnl|Prokka|KNEDKBCE_39); gnlProkkaKNEDKBCE_40 (original name was: gnl|Prokka|KNEDKBCE_40); gnlProkkaKNEDKBCE_41 (original name was: gnl|Prokka|KNEDKBCE_41); gnlProkkaKNEDKBCE_42 (original name was: gnl|Prokka|KNEDKBCE_42); gnlProkkaKNEDKBCE_43 (original name was: gnl|Prokka|KNEDKBCE_43); gnlProkkaKNEDKBCE_44 (original name was: gnl|Prokka|KNEDKBCE_44); gnlProkkaKNEDKBCE_45 (original name was: gnl|Prokka|KNEDKBCE_45); gnlProkkaKNEDKBCE_46 (original name was: gnl|Prokka|KNEDKBCE_46); gnlProkkaKNEDKBCE_47 (original name was: gnl|Prokka|KNEDKBCE_47); gnlProkkaKNEDKBCE_49 (original name was: gnl|Prokka|KNEDKBCE_49); gnlProkkaKNEDKBCE_50 (original name was: gnl|Prokka|KNEDKBCE_50); gnlProkkaKNEDKBCE_53 (original name was: gnl|Prokka|KNEDKBCE_53); gnlProkkaKNEDKBCE_54 (original name was: gnl|Prokka|KNEDKBCE_54); gnlProkkaKNEDKBCE_55 (original name was: gnl|Prokka|KNEDKBCE_55); gnlProkkaKNEDKBCE_57 (original name was: gnl|Prokka|KNEDKBCE_57); gnlProkkaKNEDKBCE_58 (original name was: gnl|Prokka|KNEDKBCE_58); gnlProkkaKNEDKBCE_59 (original name was: gnl|Prokka|KNEDKBCE_59); gnlProkkaKNEDKBCE_60 (original name was: gnl|Prokka|KNEDKBCE_60); gnlProkkaKNEDKBCE_61 (original name was: gnl|Prokka|KNEDKBCE_61); gnlProkkaKNEDKBCE_62 (original name was: gnl|Prokka|KNEDKBCE_62); gnlProkkaKNEDKBCE_63 (original name was: gnl|Prokka|KNEDKBCE_63); gnlProkkaKNEDKBCE_64 (original name was: gnl|Prokka|KNEDKBCE_64); gnlProkkaKNEDKBCE_65 (original name was: gnl|Prokka|KNEDKBCE_65); gnlProkkaKNEDKBCE_66 (original name was: gnl|Prokka|KNEDKBCE_66); gnlProkkaKNEDKBCE_67 (original name was: gnl|Prokka|KNEDKBCE_67); gnlProkkaKNEDKBCE_68 (original name was: gnl|Prokka|KNEDKBCE_68)

Compact view

gnlProkkaKNEDKBCE_48 - Region 1 - phosphonate

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Location: 10,618 - 39,133 nt. (total: 28,516 nt) Show pHMM detection rules used

Region on contig edge.

phosphonate: (phosphonates and minimum(1, [2-Hacid_dh_C, Aldedh, Aminotran_1_2, Aminotran_5, AurF, CTP_transf_like, DUF4992, Fe-ADH, HMGL-like, Metallophos_2, NTP_transf_3, NTP_transf_5, PALP, PEP_mutase, TPP_enzyme_C, TPP_enzyme_N, phosphonates]) and not (phosphonatesHydrolase or phosphonatesMeIsocitrateLyase))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaKNEDKBCE_51 - Region 1 - RiPP-like

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Location: 37,771 - 46,882 nt. (total: 9,112 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaKNEDKBCE_52 - Region 1 - RiPP-like

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Location: 12,620 - 28,102 nt. (total: 15,483 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaKNEDKBCE_56 - Region 1 - RiPP-like

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Location: 17,903 - 28,838 nt. (total: 10,936 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.